Citrus Sinensis ID: 006347

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------65
Protein Sequence
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHcHHHccccccccccccccccEEEEcccEEEEEEEccccccccEEEEEEcccccccEEEEccccccccccccEEEEEccccEEEEccccEEEEEEccccccccccEEEEEccccEEEEEcccccEEEEEccccccccccccEEEEEEccccEEEEEEcccccccccccEEEEEEcccccEEEEEEccccEEEEccccccEEEccccccEEEEEEEEEEEEccccEEEEEEEEccEEEEEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccHHHHccccccccEEcccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHccccEEEEEEcccccEEEEccccccEEEccccccEEEEEEEccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHcccccccEEEcccccccEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEEcccccccccEEEEEccccEEEEEEccccEEEEEccccccccccEEEEEccccEEEEEcccccEEEEEccccccccccccEEcccccccccEEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEEcccccccccEEEEEEEEEcccEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccHcccccccEcccccccccccccccccccHHHHHccccccccEEccccEcccccccccccccccEEEEcccccccccHHEccccHHHHHHHHHHcccEEEEEEccccEEEEEEcccEEEHHHccccccEEEEEEccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcHHHHHHHHccccHcccccccccccEEccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEHHccccccccccHHHHHHHHHHHHHHHHHHHHccHcccccccccHHHEEEcccccEEEcccccccEcccccEEccccEEEEcc
Coil and Loop (DISEMBL)
MIPIALLIILLSCFCLDFAVAidssitssqlirdpdailsngsnfklgffnpadspyrymgiwydmpseKAVIWVANrdnplkdssgiitisedgnlvlvnGQKEVLWSSnvsnlvnnstsaqlldsgnlvlrdNINRAIVWEsfqeptdsflpgmhhgidqrtgkkvqltswkslsdpstgsfsaglihqnipeifvwnvsrpywrsgpwngqifigipelksvYLFRHnftfgfandwtFFALTAQGILEERIWIKWKDNWEVGFLNLRTecdvygkcgafgicnsqekpicsclegfepknaeewnrgnwtsgcirrsklqcerrnitgkvgkedgfsklnkmkvpdftewtspatedecreqclkncsciayafdggIGCMVWRSinlidiqrlpfggtdlYIRVansdvdekgkkdvfvsPLIKGMFALAICTLFLWRWIAKRKEVIAKLSAtnvntvklqdlplfqfEELATAtnnfqlssklgqggfgpvywgrlkdgQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYmpnrsldallfdplkkERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNilldeelnpkisdfgmakifggnqdqadtgrvvgtl
Flexible Loop (DISEMBL)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTsaqlldsgnLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKnaeewnrgnwtsgcirrsklqcerrnitgkvgkedgfsklnkmkvpdfteWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRvansdvdekgkKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRkrfniiegisrgllylhRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIfggnqdqadtgrvvgtl
Low Complexity Region (SEG)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEvlwssnvsnlvnnsTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Disordered region (IsUnstruct)
**PIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGI**********************SFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVG***GFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG***************
Disordered Region (DISOPRED)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVS******TSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQ**********GKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN**********VFVSPLIKGMFALAICTLFLWRWIAKRK****************QDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Disordered Region (DISEMBL)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Disordered Region (DISPRO)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNI****GKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVI************LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	649	2.2.26 [Sep-21-2011]
Q9SXB4	820	G-type lectin S-receptor-	no	no	0.978	0.774	0.525	0.0
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.959	0.739	0.520	0.0
Q9SXB5	820	G-type lectin S-receptor-	no	no	0.973	0.770	0.509	0.0
Q9LPZ9	830	G-type lectin S-receptor-	no	no	0.973	0.761	0.494	1e-174
O81906	849	G-type lectin S-receptor-	no	no	0.964	0.737	0.455	1e-161
Q9SY89	842	Putative G-type lectin S-	no	no	0.979	0.755	0.438	1e-159
O64784	821	G-type lectin S-receptor-	no	no	0.966	0.763	0.434	1e-155
O64783	814	G-type lectin S-receptor-	no	no	0.970	0.773	0.439	1e-155
O64782	805	G-type lectin S-receptor-	no	no	0.963	0.776	0.431	1e-155
Q9SY95	802	G-type lectin S-receptor-	no	no	0.964	0.780	0.430	1e-154

>sp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/668 (52%), Positives = 466/668 (69%), Gaps = 33/668 (4%)

Query: 8   IILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMP 67
           I++LSCF L  ++A + +  S +L  D + I+S+   F+ GFF+P +S  RY GIWY+  
Sbjct: 13  ILVLSCFFLSVSLAQERAFFSGKL-NDSETIVSSFRTFRFGFFSPVNSTSRYAGIWYNSV 71

Query: 68  SEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVN-NSTSAQLLD 126
           S + VIWVAN+D P+ DSSG+I++S+DGNLV+ +GQ+ VLWS+NVS   + NST A+LLD
Sbjct: 72  SVQTVIWVANKDKPINDSSGVISVSQDGNLVVTDGQRRVLWSTNVSTQASANSTVAELLD 131

Query: 127 SGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK-KVQLTSWKSLSDPSTGSFS 185
           SGNLVL++  + A +WESF+ PTDS+LP M  G + R G   V +TSWKS SDPS GS++
Sbjct: 132 SGNLVLKEASSDAYLWESFKYPTDSWLPNMLVGTNARIGGGNVTITSWKSPSDPSPGSYT 191

Query: 186 AGLIHQNIPEIFVWNVS---RPYWRSGPWNGQIFIGIPELKS-VYLFRH--------NFT 233
           A L+    PE+F+ N +      WRSGPWNGQ+F G+P++ + V+L+R         + T
Sbjct: 192 AALVLAAYPELFIMNNNNNNSTVWRSGPWNGQMFNGLPDVYAGVFLYRFIVNDDTNGSVT 251

Query: 234 FGFANDWT--FFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
             +AND T  +F +  +G +  R W + + NW VG     TECD Y +CG F  CN ++ 
Sbjct: 252 MSYANDSTLRYFYMDYRGSVIRRDWSETRRNWTVGLQVPATECDNYRRCGEFATCNPRKN 311

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
           P+CSC+ GF P+N  EWN GNW+ GC RR  LQCER+N  G     DGF +L +MK+PDF
Sbjct: 312 PLCSCIRGFRPRNLIEWNNGNWSGGCTRRVPLQCERQNNNGSA---DGFLRLRRMKLPDF 368

Query: 352 TEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN 411
               S A+E EC   CL+ CSCIA A   G GCM+W   +L+D Q L   G DLYIR+A+
Sbjct: 369 AR-RSEASEPECLRTCLQTCSCIAAAHGLGYGCMIWNG-SLVDSQELSASGLDLYIRLAH 426

Query: 412 SDVDEKGKKDVFVSPLIKG-MFALAICTLFLWRWIAKRK---------EVIAKLSA-TNV 460
           S++  K K+ + +  ++ G +F +A C L   R + K++         ++  ++ A    
Sbjct: 427 SEIKTKDKRPILIGTILAGGIFVVAACVLLARRIVMKKRAKKKGRDAEQIFERVEALAGG 486

Query: 461 NTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG 520
           N  KL++LPLF+F+ LA ATNNF L +KLGQGGFGPVY G+L++GQEIAVKRLS+ASGQG
Sbjct: 487 NKGKLKELPLFEFQVLAAATNNFSLRNKLGQGGFGPVYKGKLQEGQEIAVKRLSRASGQG 546

Query: 521 LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
           LEE +NEV+VISKLQHRNLV+LLGCC+ GEE+ML+YE+MP +SLD  LFD  + + LDW+
Sbjct: 547 LEELVNEVVVISKLQHRNLVKLLGCCIAGEERMLVYEFMPKKSLDYYLFDSRRAKLLDWK 606

Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            RFNII GI RGLLYLHRDSRLRIIHRDLKASNILLDE L PKISDFG+A+IF GN+D+A
Sbjct: 607 TRFNIINGICRGLLYLHRDSRLRIIHRDLKASNILLDENLIPKISDFGLARIFPGNEDEA 666

Query: 641 DTGRVVGT 648
           +T RVVGT
Sbjct: 667 NTRRVVGT 674

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/663 (52%), Positives = 458/663 (69%), Gaps = 40/663 (6%)

Query: 23  DSSITSSQLIRDPDA--ILSNGSNFKLGFFNPADSP--YRYMGIWYDMPSEKAVIWVANR 78
           +  IT S  I+D ++  +L     F+ GFF P +S    RY+GIWY+    + V+WVAN+
Sbjct: 30  EDRITFSSPIKDSESETLLCKSGIFRFGFFTPVNSTTRLRYVGIWYEKIPIQTVVWVANK 89

Query: 79  DNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVS-NLVNNSTSAQLLDSGNLVLRDNIN 137
           D+P+ D+SG+I+I +DGNL + +G+  ++WS+NVS  +  N+T  QL+DSGNL+L+DN N
Sbjct: 90  DSPINDTSGVISIYQDGNLAVTDGRNRLVWSTNVSVPVAPNATWVQLMDSGNLMLQDNRN 149

Query: 138 RA-IVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEI 196
              I+WESF+ P DSF+P M  G D RTG  ++LTSW S  DPSTG+++AG+     PE+
Sbjct: 150 NGEILWESFKHPYDSFMPRMTLGTDGRTGGNLKLTSWTSHDDPSTGNYTAGIAPFTFPEL 209

Query: 197 FVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------TFGFAND--WTFFA 244
            +W  + P WRSGPWNGQ+FIG+P + S+ LF   F          +  +AND     F 
Sbjct: 210 LIWKNNVPTWRSGPWNGQVFIGLPNMDSL-LFLDGFNLNSDNQGTISMSYANDSFMYHFN 268

Query: 245 LTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKN 304
           L  +GI+ ++ W      W +G     T+CD YG+CG FG C++ E P C C++GF PKN
Sbjct: 269 LDPEGIIYQKDWSTSMRTWRIGVKFPYTDCDAYGRCGRFGSCHAGENPPCKCVKGFVPKN 328

Query: 305 AEEWNRGNWTSGCIRRSKLQCER-RNITGKVG--KEDGFSKLNKMKVPDFTEWTSPATED 361
             EWN GNW++GC+R++ LQCER RN++   G  K DGF KL KMKVP   E  S A+E 
Sbjct: 329 NTEWNGGNWSNGCMRKAPLQCERQRNVSNGGGGGKADGFLKLQKMKVPISAE-RSEASEQ 387

Query: 362 ECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKD 421
            C + CL NCSC AYA+D GIGCM+W S +L+D+Q     G DL+IRVA+S++       
Sbjct: 388 VCPKVCLDNCSCTAYAYDRGIGCMLW-SGDLVDMQSFLGSGIDLFIRVAHSELKTHSNLA 446

Query: 422 VFVS-PLIKGMFALAICTLFLWR---------------WIAKRKEVIAKLSATNVNTVKL 465
           V ++ P+I  M   A+C L   R                + KR E +   + +  N +KL
Sbjct: 447 VMIAAPVIGVMLIAAVCVLLACRKYKKRPAPAKDRSAELMFKRMEALTSDNESASNQIKL 506

Query: 466 QDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFM 525
           ++LPLF+F+ LAT+T++F L +KLGQGGFGPVY G+L +GQEIAVKRLS+ SGQGLEE M
Sbjct: 507 KELPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEIAVKRLSRKSGQGLEELM 566

Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           NEV+VISKLQHRNLV+LLGCC+EGEE+ML+YEYMP +SLDA LFDP+K++ LDW+ RFNI
Sbjct: 567 NEVVVISKLQHRNLVKLLGCCIEGEERMLVYEYMPKKSLDAYLFDPMKQKILDWKTRFNI 626

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           +EGI RGLLYLHRDSRL+IIHRDLKASNILLDE LNPKISDFG+A+IF  N+D+A+T RV
Sbjct: 627 MEGICRGLLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFRANEDEANTRRV 686

Query: 646 VGT 648
           VGT
Sbjct: 687 VGT 689

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB5|Y1135_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS=Arabidopsis thaliana GN=At1g11305 PE=2 SV=1

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/671 (50%), Positives = 455/671 (67%), Gaps = 39/671 (5%)

Query: 8   IILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMP 67
           ++ LSCF L  ++A + ++ S  L  D + I+S+   F+ GFF+P +S  RY GIWY+  
Sbjct: 13  VLSLSCFFLSVSLAHERALFSGTL-NDSETIVSSFRTFRFGFFSPVNSTNRYAGIWYNSI 71

Query: 68  SEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVN-NSTSAQLLD 126
             + VIWVAN+D P+ DSSG+I+ISEDGNLV+ +GQ+ VLWS+NVS   + NST A+LL+
Sbjct: 72  PVQTVIWVANKDTPINDSSGVISISEDGNLVVTDGQRRVLWSTNVSTRASANSTVAELLE 131

Query: 127 SGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK-KVQLTSWKSLSDPSTGSFS 185
           SGNLVL+D    A +WESF+ PTDS+LP M  G + RTG   + +TSW + SDPS GS++
Sbjct: 132 SGNLVLKDANTDAYLWESFKYPTDSWLPNMLVGTNARTGGGNITITSWTNPSDPSPGSYT 191

Query: 186 AGLIHQNIPEIFVWNVS---RPYWRSGPWNGQIFIGIPEL-KSVYLFRHNF--------T 233
           A L+    PE+F++N +      WRSGPWNG +F G+P++   ++L+R           T
Sbjct: 192 AALVLAPYPELFIFNNNDNNATVWRSGPWNGLMFNGLPDVYPGLFLYRFKVNDDTNGSAT 251

Query: 234 FGFANDWTF--FALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
             +AND T     L  +G    R W + + NW +G     TECD+Y +CG +  CN ++ 
Sbjct: 252 MSYANDSTLRHLYLDYRGFAIRRDWSEARRNWTLGSQVPATECDIYSRCGQYTTCNPRKN 311

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
           P CSC++GF P+N  EWN GNW+ GCIR+  LQCER+N     G  D F KL +MK+PDF
Sbjct: 312 PHCSCIKGFRPRNLIEWNNGNWSGGCIRKLPLQCERQN---NKGSADRFLKLQRMKMPDF 368

Query: 352 TEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN 411
               S A+E EC   CL++CSCIA+A   G GCM+W   +L+D Q L   G DL IR+A+
Sbjct: 369 AR-RSEASEPECFMTCLQSCSCIAFAHGLGYGCMIWNR-SLVDSQVLSASGMDLSIRLAH 426

Query: 412 SDVDEKGKKDVFV-SPLIKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNTV------- 463
           S+   + ++ + + + L  G+F +A C L   R + K++   AK   T+   +       
Sbjct: 427 SEFKTQDRRPILIGTSLAGGIFVVATCVLLARRIVMKKR---AKKKGTDAEQIFKRVEAL 483

Query: 464 ------KLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS 517
                 KL++LPLF+F+ LATAT+NF LS+KLGQGGFGPVY G L +GQEIAVKRLS+AS
Sbjct: 484 AGGSREKLKELPLFEFQVLATATDNFSLSNKLGQGGFGPVYKGMLLEGQEIAVKRLSQAS 543

Query: 518 GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL 577
           GQGLEE + EV+VISKLQHRNLV+L GCC+ GEE+ML+YE+MP +SLD  +FDP + + L
Sbjct: 544 GQGLEELVTEVVVISKLQHRNLVKLFGCCIAGEERMLVYEFMPKKSLDFYIFDPREAKLL 603

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           DW  RF II GI RGLLYLHRDSRLRIIHRDLKASNILLDE L PKISDFG+A+IF GN+
Sbjct: 604 DWNTRFEIINGICRGLLYLHRDSRLRIIHRDLKASNILLDENLIPKISDFGLARIFPGNE 663

Query: 638 DQADTGRVVGT 648
           D+A+T RVVGT
Sbjct: 664 DEANTRRVVGT 674

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2

 Score =  611 bits (1575), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 331/669 (49%), Positives = 444/669 (66%), Gaps = 37/669 (5%)

Query: 13  CFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAV 72
           CF L   +A D  IT S   RD + ++SN S F+ GFF+P +S  RY GIW++    + V
Sbjct: 13  CFSLRLCLATDV-ITFSSEFRDSETVVSNHSTFRFGFFSPVNSTGRYAGIWFNNIPVQTV 71

Query: 73  IWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNV-SNLVNNSTSAQLLDSGNLV 131
           +WVAN ++P+ DSSG+++IS++GNLV+++G+ +V WS+NV   +  N+  A+LL++GNLV
Sbjct: 72  VWVANSNSPINDSSGMVSISKEGNLVVMDGRGQVHWSTNVLVPVAANTFYARLLNTGNLV 131

Query: 132 LRDNINRA--IVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLI 189
           L    N    I+WESF+ P + +LP M    D +TG+ ++L SWKS  DPS G +SAGLI
Sbjct: 132 LLGTTNTGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDPSPGRYSAGLI 191

Query: 190 HQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELK-SVYLF--------RHNFTFGFANDW 240
               PE+ VW      WRSGPWNGQ FIG+P +   + LF        R + +  +A + 
Sbjct: 192 PLPFPELVVWKDDLLMWRSGPWNGQYFIGLPNMDYRINLFELTLSSDNRGSVSMSYAGNT 251

Query: 241 TF--FALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGIC--NSQEKPICSC 296
               F L ++G + +R W      W+       T+CD Y  CG F  C  N    P C C
Sbjct: 252 LLYHFLLDSEGSVFQRDWNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFNPGSTPPCMC 311

Query: 297 LEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTS 356
           + GF+P++  EWN GNWT GC+R++ LQCE R+      K DGF ++ KMKVP   +  S
Sbjct: 312 IRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMKVPHNPQ-RS 370

Query: 357 PATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDE 416
            A E +C E CLKNCSC AY+FD GIGC++W S NL+D+Q     G   YIR+A+S+  +
Sbjct: 371 GANEQDCPESCLKNCSCTAYSFDRGIGCLLW-SGNLMDMQEFSGTGVVFYIRLADSEFKK 429

Query: 417 KGKKDVFVS-PLIKGMFALA-ICTLFLWRWIAKRKEV----------IAKLSATNV---- 460
           +  + + ++  L+ G F  A    L LW+ IAK +E           +  LS+ +V    
Sbjct: 430 RTNRSIVITVTLLVGAFLFAGTVVLALWK-IAKHREKNRNTRLLNERMEALSSNDVGAIL 488

Query: 461 -NTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ 519
            N  KL++LPLF+F+ LA ATNNF +++KLGQGGFG VY GRL++G +IAVKRLS+ SGQ
Sbjct: 489 VNQYKLKELPLFEFQVLAVATNNFSITNKLGQGGFGAVYKGRLQEGLDIAVKRLSRTSGQ 548

Query: 520 GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW 579
           G+EEF+NEV+VISKLQHRNLVRLLG C+EGEE+ML+YE+MP   LDA LFDP+K+  LDW
Sbjct: 549 GVEEFVNEVVVISKLQHRNLVRLLGFCIEGEERMLVYEFMPENCLDAYLFDPVKQRLLDW 608

Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + RFNII+GI RGL+YLHRDSRL+IIHRDLKASNILLDE LNPKISDFG+A+IF GN+D+
Sbjct: 609 KTRFNIIDGICRGLMYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLARIFQGNEDE 668

Query: 640 ADTGRVVGT 648
             T RVVGT
Sbjct: 669 VSTVRVVGT 677

Receptor-like serine/threonine-protein kinase that represses the disease resistance signaling pathway triggered in response to bacterial pathogen such as Pseudomonas syringae pv. tomato.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  569 bits (1466), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 319/700 (45%), Positives = 429/700 (61%), Gaps = 74/700 (10%)

Query: 7   LIILLSCFCLDFAVAIDSSITSSQLIRD---PDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           L + L  F  + ++A ++ I   + +RD      ++S    F+LGFF+P  S +R++GIW
Sbjct: 11  LSLFLYFFLYESSMAANT-IRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIW 69

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNV--SNLVNNSTS 121
           Y    +KAV+WVANR  P+ D SG++ IS DGNLVL++G+   +WSSN+  S   NN+  
Sbjct: 70  YGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRV 129

Query: 122 AQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPST 181
             + D+GN VL +      +WESF  PTD+FLP M   ++ +TG      SW+S +DPS 
Sbjct: 130 VSIHDTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSP 189

Query: 182 GSFSAGLIHQNIPEIFVW--NVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFAND 239
           G++S G+     PEI +W  N +R  WRSG WN  IF GIP +  +  + + F      D
Sbjct: 190 GNYSLGVDPSGAPEIVLWEGNKTRK-WRSGQWNSAIFTGIPNMSLLTNYLYGFKLSSPPD 248

Query: 240 WT----------------FFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAF 283
            T                 F +   G  EE  W +    W        +ECD Y +CG F
Sbjct: 249 ETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKF 308

Query: 284 GICNSQ-EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSK 342
           GIC+ +    ICSC+ G+E     + + GNW+ GC RR+ L+CER    G    ED F  
Sbjct: 309 GICDMKGSNGICSCIHGYE-----QVSVGNWSRGCRRRTPLKCERNISVG----EDEFLT 359

Query: 343 LNKMKVPDFT--EWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPF 400
           L  +K+PDF   E      ED CRE+CL+NCSC AY+  GGIGCM+W   +L+D+Q+   
Sbjct: 360 LKSVKLPDFEIPEHNLVDPED-CRERCLRNCSCNAYSLVGGIGCMIWNQ-DLVDLQQFEA 417

Query: 401 GGTDLYIRVANSDVDE--KGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKE-------- 450
           GG+ L+IR+A+S+V E  K K  V V+ L+ G+  + I  L LWR+  KRK+        
Sbjct: 418 GGSSLHIRLADSEVGENRKTKIAVIVAVLV-GVILIGIFALLLWRF--KRKKDVSGAYCG 474

Query: 451 -------VIAKLSATNVNT---------------VKLQDLPLFQFEELATATNNFQLSSK 488
                  V+A L+ +   T               V   +LP+F    +A ATN+F   ++
Sbjct: 475 KNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENE 534

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE 548
           LG+GGFGPVY G L+DG+EIAVKRLS  SGQG++EF NE+++I+KLQHRNLVRLLGCC E
Sbjct: 535 LGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFE 594

Query: 549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRD 608
           GEEKML+YEYMPN+SLD  LFD  K+  +DW+ RF+IIEGI+RGLLYLHRDSRLRIIHRD
Sbjct: 595 GEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRD 654

Query: 609 LKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LK SN+LLD E+NPKISDFGMA+IFGGNQ++A+T RVVGT
Sbjct: 655 LKVSNVLLDAEMNPKISDFGMARIFGGNQNEANTVRVVGT 694

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score =  561 bits (1445), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/694 (43%), Positives = 418/694 (60%), Gaps = 58/694 (8%)

Query: 2   IPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMG 61
           + +   +++    C + + +  +S T +  IR+ D+++S   +F+LGFF P +S  RY+G
Sbjct: 8   LTLVTTLLIFHQLCSNVSCSTSNSFTRNHTIREGDSLISEDESFELGFFTPKNSTLRYVG 67

Query: 62  IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTS 121
           IWY     + V+WVANR+ PL D  G + I++DGNLV+VNGQ E +WS+NV    NN T 
Sbjct: 68  IWYKNIEPQTVVWVANREKPLLDHKGALKIADDGNLVIVNGQNETIWSTNVEPESNN-TV 126

Query: 122 AQLLDSGNLVL-RDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS 180
           A L  +G+LVL  D+  R   WESF  PTD+FLPGM   ++   G+      WKS SDPS
Sbjct: 127 AVLFKTGDLVLCSDSDRRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPS 186

Query: 181 TGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGF---- 236
            G +S G+      EI +W   +  WRSGPWN  IF GIP++    L   N+ +GF    
Sbjct: 187 PGKYSMGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDM----LRFTNYIYGFKLSS 242

Query: 237 ----------------ANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKC 280
                           ++D+  F +   G+ E+  W K   NW +      TEC+ Y +C
Sbjct: 243 PPDRDGSVYFTYVASDSSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRC 302

Query: 281 GAFGICNSQEK---PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKE 337
           G + +C+  ++     CSC++GFEP + ++WN  +++ GC RR  L C +  +    G+E
Sbjct: 303 GNYSVCDDSKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLV---AGQE 359

Query: 338 DGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQR 397
           DGF+ L  +KVPDF         + C++ C ++CSC AYA   GIGCM+W + +LID++ 
Sbjct: 360 DGFTVLKGIKVPDFGSVVLHNNSETCKDVCARDCSCKAYALVVGIGCMIW-TRDLIDMEH 418

Query: 398 LPFGGTDLYIRVANSDVDEKGKKD----VFVSPLIKGMFALAICTLFLWRWIAKRKEVIA 453
              GG  + IR+A S +   GK++    + V  +I G F L +C   LW++    K  + 
Sbjct: 419 FERGGNSINIRLAGSKLG-GGKENSTLWIIVFSVI-GAFLLGLCIWILWKFKKSLKAFLW 476

Query: 454 KLSATNV-------------------NTVKLQDLPLFQFEELATATNNFQLSSKLGQGGF 494
           K     V                   + V   DLP+F F+ +A+AT +F   +KLGQGGF
Sbjct: 477 KKKDITVSDIIENRDYSSSPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGF 536

Query: 495 GPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML 554
           G VY G   +G+EIAVKRLS  S QGLEEF NE+++I+KLQHRNLVRLLGCC+E  EKML
Sbjct: 537 GTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKML 596

Query: 555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           +YEYMPN+SLD  LFD  K+  LDWRKR+ +I GI+RGLLYLHRDSRL+IIHRDLKASNI
Sbjct: 597 LYEYMPNKSLDRFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNI 656

Query: 615 LLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LLD E+NPKISDFGMA+IF   QD A+T RVVGT
Sbjct: 657 LLDTEMNPKISDFGMARIFNYRQDHANTIRVVGT 690

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64784|Y1136_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana GN=At1g61360 PE=2 SV=1

 Score =  550 bits (1416), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/667 (43%), Positives = 418/667 (62%), Gaps = 40/667 (5%)

Query: 15  CLDFAVAIDSS-----ITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSE 69
           CL    A+ SS     IT+S  +     + S G +++LGFF+  +S  +Y+GIW+   + 
Sbjct: 6   CLLLITALFSSYGYAAITTSSPLSIGVTLSSPGGSYELGFFSSNNSGNQYVGIWFKKVTP 65

Query: 70  KAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGN 129
           + ++WVANR+ P+  +   +TIS +G+L+L++ +K+++WSS   +  +N   A+LLD+GN
Sbjct: 66  RVIVWVANREKPVSSTMANLTISSNGSLILLDSKKDLVWSSG-GDPTSNKCRAELLDTGN 124

Query: 130 LVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLI 189
           LV+ DN+    +W+SF+   D+ LP      D    KK  LTSWKS +DPS G F A + 
Sbjct: 125 LVVVDNVTGNYLWQSFEHLGDTMLPLTSLMYDIPNNKKRVLTSWKSETDPSPGEFVAEIT 184

Query: 190 HQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYL---------FRHNFTFGFAN-- 238
            Q   +  +   S PYWRSGPW G  F GIPE+ + Y+               F F    
Sbjct: 185 PQVPSQGLIRKGSSPYWRSGPWAGTRFTGIPEMDASYVNPLGMVQDEVNGTGVFAFCVLR 244

Query: 239 --DWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSC 296
             + ++  LT +G L  RI      +W   F    T CD+YG+CG FG+C     P+C C
Sbjct: 245 NFNLSYIKLTPEGSL--RITRNNGTDWIKHFEGPLTSCDLYGRCGPFGLCVRSGTPMCQC 302

Query: 297 LEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKE-DGFSKLNKMKVPDFTEWT 355
           L+GFEPK+ EEW  GNW+ GC+RR+ L C+  +     GK+ D F  ++ +K PD  E  
Sbjct: 303 LKGFEPKSDEEWRSGNWSRGCVRRTNLSCQGNSSVETQGKDRDVFYHVSNIKPPDSYELA 362

Query: 356 SPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVD 415
           S + E++C + CL+NCSC A+++  GIGC+VW    L+D  +   GG  L +R+A+S++ 
Sbjct: 363 SFSNEEQCHQGCLRNCSCTAFSYVSGIGCLVWNQ-ELLDTVKFIGGGETLSLRLAHSEL- 420

Query: 416 EKGKKDVFVSPLIKGMFALAICTLFL------WRWIAKR-------KEVIAKLSATNVNT 462
             G+K + +  +     +L++C + +      WR+  K+       K+ +     +++ +
Sbjct: 421 -TGRKRIKI--ITVATLSLSVCLILVLVACGCWRYRVKQNGSSLVSKDNVEGAWKSDLQS 477

Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
             +  L  F+  +L TATNNF + +KLGQGGFG VY G+L+DG+EIAVKRL+ +S QG E
Sbjct: 478 QDVSGLNFFEIHDLQTATNNFSVLNKLGQGGFGTVYKGKLQDGKEIAVKRLTSSSVQGTE 537

Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
           EFMNE+ +ISKLQHRNL+RLLGCC++GEEK+L+YEYM N+SLD  +FD  KK  +DW  R
Sbjct: 538 EFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLDIFIFDLKKKLEIDWATR 597

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           FNII+GI+RGLLYLHRDS LR++HRDLK SNILLDE++NPKISDFG+A++F GNQ Q  T
Sbjct: 598 FNIIQGIARGLLYLHRDSFLRVVHRDLKVSNILLDEKMNPKISDFGLARLFHGNQHQDST 657

Query: 643 GRVVGTL 649
           G VVGTL
Sbjct: 658 GSVVGTL 664

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64783|Y1137_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2

 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/667 (43%), Positives = 415/667 (62%), Gaps = 37/667 (5%)

Query: 6   LLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYD 65
           LLII  SC     A+   S ++  Q +  P     NG+ ++LGFF+P +S  +Y+GIW+ 
Sbjct: 15  LLIIFPSCAFA--AITRASPLSIGQTLSSP-----NGT-YELGFFSPNNSRNQYVGIWFK 66

Query: 66  MPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLL 125
             + + V+WVANRD P+ +++  +TI+ +G+L+LV  ++ V+WS       +N   A+LL
Sbjct: 67  NITPRVVVWVANRDKPVTNNAANLTINSNGSLILVEREQNVVWSIG-ETFSSNELRAELL 125

Query: 126 DSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFS 185
           ++GNLVL D ++   +WESF+   D+ L       D    KK  L+SWK+ +DPS G F 
Sbjct: 126 ENGNLVLIDGVSERNLWESFEHLGDTMLLESSVMYDVPNNKKRVLSSWKNPTDPSPGEFV 185

Query: 186 AGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFA-------- 237
           A L  Q  P+ F+   SRPYWR GPW    F GIPE+   ++ + + +   A        
Sbjct: 186 AELTTQVPPQGFIMRGSRPYWRGGPWARVRFTGIPEMDGSHVSKFDISQDVAAGTGSLTY 245

Query: 238 ------NDWTFFALTAQGILEERIWIKWKDN--WEVGFLNLRTECDVYGKCGAFGICNSQ 289
                 ++ ++  LT+ G L+    I W +   W        + CDVY  CG FG+C   
Sbjct: 246 SLERRNSNLSYTTLTSAGSLK----IIWNNGSGWVTDLEAPVSSCDVYNTCGPFGLCIRS 301

Query: 290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCE-RRNITGKVGKEDGFSKLNKMKV 348
             P C CL+GF PK+ EEWN+ NWT GC+RR+ L C+   + T +    D F  +  +K 
Sbjct: 302 NPPKCECLKGFVPKSDEEWNKRNWTGGCMRRTNLSCDVNSSATAQANNGDIFDIVANVKP 361

Query: 349 PDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIR 408
           PDF E+ S   E++C+++CL NCSC A+++   IGC+VW    L+D+ +   GG  L IR
Sbjct: 362 PDFYEYLSLINEEDCQQRCLGNCSCTAFSYIEQIGCLVWNR-ELVDVMQFVAGGETLSIR 420

Query: 409 VANSDVDEKGKKDVFVSPL--IKGMFALAICTLFLWRWIAKRKEVIAKLSATNVNT---- 462
           +A+S++    +  + V+ +  I     L   + + WR+ AK+ +       T+ +     
Sbjct: 421 LASSELAGSNRVKIIVASIVSISVFMILVFASYWYWRYKAKQNDSNPIPLETSQDAWREQ 480

Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           +K QD+  F  + + T TNNF + +KLGQGGFGPVY G L+DG+EIA+KRLS  SGQGLE
Sbjct: 481 LKPQDVNFFDMQTILTITNNFSMENKLGQGGFGPVYKGNLQDGKEIAIKRLSSTSGQGLE 540

Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
           EFMNE+++ISKLQHRNLVRLLGCC+EGEEK+LIYE+M N+SL+  +FD  KK  LDW KR
Sbjct: 541 EFMNEIILISKLQHRNLVRLLGCCIEGEEKLLIYEFMANKSLNTFIFDSTKKLELDWPKR 600

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           F II+GI+ GLLYLHRDS LR++HRD+K SNILLDEE+NPKISDFG+A++F G Q QA+T
Sbjct: 601 FEIIQGIACGLLYLHRDSCLRVVHRDMKVSNILLDEEMNPKISDFGLARMFQGTQHQANT 660

Query: 643 GRVVGTL 649
            RVVGTL
Sbjct: 661 RRVVGTL 667

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64782|SD129_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana GN=SD129 PE=1 SV=1

 Score =  548 bits (1413), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/665 (43%), Positives = 415/665 (62%), Gaps = 40/665 (6%)

Query: 6   LLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYD 65
           LL++++   C   A+   S ++  Q +  P      G  ++LGFF+P ++  +Y+GIW+ 
Sbjct: 9   LLLLIIFPTCGYAAINTSSPLSIRQTLSSP------GGFYELGFFSPNNTQNQYVGIWFK 62

Query: 66  MPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLL 125
               + V+WVANRD P+  S+  +TIS +G+L+L++G+++V+WS+  +   +N   A+LL
Sbjct: 63  KIVPRVVVWVANRDTPVTSSAANLTISSNGSLILLDGKQDVIWSTGKA-FTSNKCHAELL 121

Query: 126 DSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFS 185
           D+GN V+ D+++   +W+SF+   ++ LP      D   GKK  LT+WKS SDPS G FS
Sbjct: 122 DTGNFVVIDDVSGNKLWQSFEHLGNTMLPQSSLMYDTSNGKKRVLTTWKSNSDPSPGEFS 181

Query: 186 AGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF---------TFGF 236
             +  Q   +  +   S PYWR GPW    F GI  + + Y+   +          +F +
Sbjct: 182 LEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGIDASYVSPFSVVQDTAAGTGSFSY 241

Query: 237 AN----DWTFFALTAQGILEERIWIKWKD--NWEVGFLNLRTECDVYGKCGAFGICNSQE 290
           +     + ++  LT +G ++    I W D  NW++        CD+YG+CG +G+C   +
Sbjct: 242 STLRNYNLSYVTLTPEGKMK----ILWDDGNNWKLHLSLPENPCDLYGRCGPYGLCVRSD 297

Query: 291 KPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKE-DGFSKLNKMKVP 349
            P C CL+GF PK+ EEW +GNWTSGC+RR+KL C+ ++     GK+ D F ++  +K P
Sbjct: 298 PPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQAKSSMKTQGKDTDIFYRMTDVKTP 357

Query: 350 DFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRV 409
           D  ++ S    ++C + CL NCSC A+A+  GIGC+VW    L D  +    G  L+IR+
Sbjct: 358 DLHQFASFLNAEQCYQGCLGNCSCTAFAYISGIGCLVWNG-ELADTVQFLSSGEFLFIRL 416

Query: 410 ANSDVDEKGKKDVFVSPLIKG--MFALAICTLFLWRWIAKRKEVIAKLSATNVNTVKLQD 467
           A+S++    ++ + V   +       L    + LWR+ AK+ +          N  + QD
Sbjct: 417 ASSELAGSSRRKIIVGTTVSLSIFLILVFAAIMLWRYRAKQNDAWK-------NGFERQD 469

Query: 468 LP---LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEF 524
           +     F+   + TATNNF  S+KLGQGGFGPVY G+L DG+EI VKRL+ +SGQG EEF
Sbjct: 470 VSGVNFFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQGTEEF 529

Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           MNE+ +ISKLQHRNLVRLLG C++GEEK+LIYE+M N+SLD  +FDP  K  LDW KRFN
Sbjct: 530 MNEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRFN 589

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           II+GI+RGLLYLHRDSRLR+IHRDLK SNILLD+ +NPKISDFG+A++F G Q Q +T R
Sbjct: 590 IIQGIARGLLYLHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTRR 649

Query: 645 VVGTL 649
           VVGTL
Sbjct: 650 VVGTL 654

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY95|Y1155_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1

 Score =  544 bits (1402), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 286/664 (43%), Positives = 415/664 (62%), Gaps = 38/664 (5%)

Query: 9   ILLSCFCLDF---AVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYD 65
            L S   L F   A+   S ++  Q +  P+ I      F+LGFF+P +S   Y+GIW+ 
Sbjct: 7   FLFSTLLLSFSYAAITPTSPLSIGQTLSSPNGI------FELGFFSPNNSRNLYVGIWFK 60

Query: 66  MPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLL 125
               + V+WVANR+N + D++  + IS +G+L+L +G+   +WS+      +N +SA+L 
Sbjct: 61  GIIPRTVVWVANRENSVTDATADLAISSNGSLLLFDGKHSTVWSTG-ETFASNGSSAELS 119

Query: 126 DSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFS 185
           DSGNL++ D ++   +W+SF+   D+ LP      +  TG+K  L+SWKS +DP  G F 
Sbjct: 120 DSGNLLVIDKVSGITLWQSFEHLGDTMLPYSSLMYNPGTGEKRVLSSWKSYTDPLPGEFV 179

Query: 186 AGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGF-ANDWTFFA 244
             +  Q  P+ F+   S+PYWRSGPW    F G+P     Y   H F+    AN   +F+
Sbjct: 180 GYITTQVPPQGFIMRGSKPYWRSGPWAKTRFTGVPLTDESY--THPFSVQQDANGSVYFS 237

Query: 245 ------------LTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKP 292
                       LT++G L  ++      +W +        CD YG CG FG+C     P
Sbjct: 238 HLQRNFKRSLLVLTSEGSL--KVTHHNGTDWVLNIDVPANTCDFYGVCGPFGLCVMSIPP 295

Query: 293 ICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFT 352
            C C +GF P+ +EEW RGNWT GC+RR++L C+  N TG+    + F  +  +K PDF 
Sbjct: 296 KCKCFKGFVPQFSEEWKRGNWTGGCVRRTELLCQG-NSTGR--HVNVFHPVANIKPPDFY 352

Query: 353 EWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANS 412
           E+ S  + +EC + CL NCSC+A+A+  GIGC++W    L+D+ +   GG  L IR+A+S
Sbjct: 353 EFVSSGSAEECYQSCLHNCSCLAFAYINGIGCLIWNQ-ELMDVMQFSVGGELLSIRLASS 411

Query: 413 DVDEKGKKDVFVSPLIK-GMF-ALAICTLFLWRWIAKRKEVIAKLSATNV--NTVKLQD- 467
           ++    +K   ++ ++   +F  LA      WR+  K   +++K+S      N +K +D 
Sbjct: 412 EMGGNQRKKTIIASIVSISLFVTLASAAFGFWRYRLKHNAIVSKVSLQGAWRNDLKSEDV 471

Query: 468 --LPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFM 525
             L  F+ + +  ATNNF L +KLGQGGFGPVY G+L+DG+EIAVKRLS +SGQG EEFM
Sbjct: 472 SGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFM 531

Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           NE+++ISKLQH NLVR+LGCC+EGEE++L+YE+M N+SLD  +FD  K+  +DW KRF+I
Sbjct: 532 NEILLISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFDSRKRVEIDWPKRFSI 591

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           I+GI+RGLLYLHRDSRLRIIHRD+K SNILLD+++NPKISDFG+A+++ G + Q +T R+
Sbjct: 592 IQGIARGLLYLHRDSRLRIIHRDVKVSNILLDDKMNPKISDFGLARMYEGTKYQDNTRRI 651

Query: 646 VGTL 649
           VGTL
Sbjct: 652 VGTL 655

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	649
359496521	844	PREDICTED: G-type lectin S-receptor-like	0.981	0.754	0.604	0.0
224114125	832	predicted protein [Populus trichocarpa]	0.984	0.768	0.584	0.0
224114137	827	predicted protein [Populus trichocarpa]	0.987	0.775	0.584	0.0
359497280	920	PREDICTED: G-type lectin S-receptor-like	0.935	0.659	0.610	0.0
224112032	824	predicted protein [Populus trichocarpa]	0.989	0.779	0.570	0.0
224114141	824	predicted protein [Populus trichocarpa]	0.989	0.779	0.569	0.0
224078778	831	predicted protein [Populus trichocarpa]	0.989	0.772	0.584	0.0
359496519	854	PREDICTED: G-type lectin S-receptor-like	0.983	0.747	0.579	0.0
296084622	817	unnamed protein product [Vitis vinifera]	0.979	0.778	0.592	0.0
147840284	827	hypothetical protein VITISV_016155 [Viti	0.952	0.747	0.573	0.0

>gi|359496521|ref|XP_002262970.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera]

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/691 (60%), Positives = 508/691 (73%), Gaps = 54/691 (7%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           +  L++LLS  C  F  AID+ +TS++ I DP+ ++SNGS FKLGFF+ ADS  RY+GIW
Sbjct: 9   VIALLLLLSVICFGFCTAIDT-MTSTRFIEDPETLVSNGSAFKLGFFSLADSTNRYVGIW 67

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y  PS   VIWVANRD PL DSSGI+TISEDGNL+++NGQKE++WSSNVSN   NS SAQ
Sbjct: 68  YSTPSLSTVIWVANRDKPLNDSSGIVTISEDGNLLVMNGQKEIVWSSNVSNASANS-SAQ 126

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           LLDSGNLVL+DN + +I WES Q P+ S LP M    D  TG+KV LTSWKS SDPS GS
Sbjct: 127 LLDSGNLVLQDN-SGSITWESIQHPSHSLLPNMKISTDTNTGEKVVLTSWKSPSDPSIGS 185

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------- 232
           FS G+   NIP+IF+WN S PYWRSGPW+ QIFIGIP++ SVY  R  F           
Sbjct: 186 FSLGMNPLNIPQIFIWNGSHPYWRSGPWSSQIFIGIPDMDSVY--RSGFQVVDDKEGTVY 243

Query: 233 -TFGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQ 289
            TF  AN   + ++ LT+QG L +      K+ W V + + ++ECDVYG CGAFGICNS 
Sbjct: 244 ATFTEANSSIFLYYVLTSQGSLVQTDREYGKEEWGVTWRSNKSECDVYGTCGAFGICNSG 303

Query: 290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVP 349
             PICSCL G+EPK  EEW+RGNWTSGC+R++ LQCER N +G+ GK DGF +L  +KVP
Sbjct: 304 TSPICSCLRGYEPKYTEEWSRGNWTSGCVRKTTLQCERTNSSGQQGKIDGFFRLTTVKVP 363

Query: 350 DFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRV 409
           D+ +W S A EDECRE+CLKNCSCIAY++  GIGCM+W S +LID+Q+    G DLYIR+
Sbjct: 364 DYADW-SLAHEDECREECLKNCSCIAYSYYSGIGCMLW-SGSLIDLQKFTKRGADLYIRL 421

Query: 410 ANSDVDEKGKKDVFV---SPLIKGMFALAICTLFLWRWIA------KRKEVIAK------ 454
           A+S++  K K+D+ V     ++ G  A+AICT FLWRWI       K KE++        
Sbjct: 422 AHSELG-KNKRDMKVIISVTIVIGTIAIAICTYFLWRWIGRQAVKEKSKEILPSDRGHAY 480

Query: 455 ------LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI 508
                 +   NVN VKL++LPL  FE+LA ATNNF  ++KLGQGGFGPVY G L  GQ+I
Sbjct: 481 QNYDMNMLGDNVNRVKLEELPLLDFEKLAAATNNFHEANKLGQGGFGPVYRGNLPGGQKI 540

Query: 509 AVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG-C----------CVEGEEKMLIYE 557
           AVKRLS+AS QG EEFMNE++VISK+QHRNLVRLLG C          C+EG+EK+LIYE
Sbjct: 541 AVKRLSRASAQGQEEFMNEMIVISKIQHRNLVRLLGFCIEGDVRLLGFCIEGDEKLLIYE 600

Query: 558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD 617
           YMPN+SLDA LFDPLK+E LDWR+RF+IIEGI RGLLYLHRDSRL+IIHRDLKASNILLD
Sbjct: 601 YMPNKSLDAFLFDPLKRESLDWRRRFSIIEGIGRGLLYLHRDSRLKIIHRDLKASNILLD 660

Query: 618 EELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           E+LN KISDFGMA+IFG NQDQA+T RVVGT
Sbjct: 661 EDLNAKISDFGMARIFGSNQDQANTMRVVGT 691

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114125|ref|XP_002316674.1| predicted protein [Populus trichocarpa] gi|222859739|gb|EEE97286.1| predicted protein [Populus trichocarpa]

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/679 (58%), Positives = 493/679 (72%), Gaps = 40/679 (5%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           I  L ++L CFCL+F  +ID+ I+ SQ IRDP+ I+S G  F+LGFF+P +S  RY+ IW
Sbjct: 9   IIALHLILYCFCLEFGASIDT-ISLSQFIRDPETIVSAGKKFELGFFSPVNSTNRYVAIW 67

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y   S    +WVANR+ PL DSSGI+TISEDGNLV++NGQKE LWSSNVS  +N+S  AQ
Sbjct: 68  YSNISITTPVWVANRNKPLNDSSGIMTISEDGNLVVLNGQKETLWSSNVSTGMNDS-RAQ 126

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           L+D GNLVL  + N   +W+SFQEP+D+++P M    + RTGKK  LTSWKS SDPS GS
Sbjct: 127 LMDDGNLVLGGSENGNSLWQSFQEPSDTYIPKMRLTANPRTGKKTPLTSWKSPSDPSIGS 186

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------T 233
           FS G+   +IPE+ +WN SRP WR+GPWNGQ+FIG+PE+ SVYL   N           +
Sbjct: 187 FSLGIDPSSIPEVVLWNDSRPIWRTGPWNGQVFIGVPEMNSVYLDGFNLADDGNGGFTLS 246

Query: 234 FGFAND--WTFFALTAQGILEERIWI-----KWKDNWEVGFLNLRTECDVYGKCGAFGIC 286
            GFA++   T F L+++G   +  W       W+  WE    +++ ECDVYGKCG+F  C
Sbjct: 247 VGFADESYITNFVLSSEGKFGQVFWDDMNEGSWRYQWE----SVQDECDVYGKCGSFASC 302

Query: 287 NSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKM 346
           +++  PICSCL+GFEPKNA+EWN  NWT GC+RR  ++CER    G++GKEDGFSKL ++
Sbjct: 303 DAKNTPICSCLKGFEPKNADEWNSRNWTHGCVRRKAMRCERIQNGGELGKEDGFSKLERV 362

Query: 347 KVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLY 406
           KVP F EW+S  TE +CR+ C  NCSCIAYA+  GI CM+W+  NL DI++   GG DLY
Sbjct: 363 KVPGFAEWSSSITEQKCRDDCWNNCSCIAYAYYTGIYCMLWKG-NLTDIKKFSSGGADLY 421

Query: 407 IRVANSDVDEK--GKKDVFVSPLIKGMFALAICTLFLWRWI-----------AKRKEVI- 452
           IR+A +++D K    K +    ++ G  A+AIC  + WRWI            KRK  I 
Sbjct: 422 IRLAYTELDNKKINMKVIISLTVVVGAIAIAICVFYSWRWIERKRTSKKVLLPKRKHPIL 481

Query: 453 --AKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAV 510
               +   N+N VKLQ+LPLF  + L  AT+NF  ++KLGQGGFGPVY G+  DGQEIA+
Sbjct: 482 LDENVIQDNLNHVKLQELPLFSLQMLIVATDNFNTANKLGQGGFGPVYKGKFPDGQEIAL 541

Query: 511 KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
           KRLS+ASGQG EEFM EV+VISKLQH NLVRLLGCCVEGEEKML+YEYMPNRSLDA LFD
Sbjct: 542 KRLSRASGQGQEEFMTEVVVISKLQHMNLVRLLGCCVEGEEKMLVYEYMPNRSLDAFLFD 601

Query: 571 PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           P +K+ LDW+KRFNI+EGI RGLLYLHRDSRLRIIHRDLKASNILLD+ELNPKISDFGMA
Sbjct: 602 PSRKQLLDWKKRFNIVEGICRGLLYLHRDSRLRIIHRDLKASNILLDQELNPKISDFGMA 661

Query: 631 KIFGGNQDQADTGRVVGTL 649
           +IFG N+DQADTGRVVGT 
Sbjct: 662 RIFGRNEDQADTGRVVGTF 680

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114137|ref|XP_002316677.1| predicted protein [Populus trichocarpa] gi|222859742|gb|EEE97289.1| predicted protein [Populus trichocarpa]

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/676 (58%), Positives = 495/676 (73%), Gaps = 35/676 (5%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           IA L+IL  CFC +F  ++D+ ITSSQ I+DP+ I+S G+ FKLGFF+P +S  RY  IW
Sbjct: 10  IAFLLILY-CFCWEFGASVDT-ITSSQYIKDPEDIVSAGNKFKLGFFSPVNSTNRYAAIW 67

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y   S    +WVANR+ PL DSSGI+TISEDGNLV++NGQKE+LWSSNVS  +N+S  AQ
Sbjct: 68  YSNISITTPVWVANRNMPLNDSSGIMTISEDGNLVVLNGQKEILWSSNVSTGMNDS-RAQ 126

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           L+D GNLVL  + N   +W+SFQEP+D+++P M    + RTGKK  L SW S+SDPS GS
Sbjct: 127 LMDDGNLVLGGSENGNSLWQSFQEPSDTYMPKMRLTANSRTGKKTLLKSWTSVSDPSIGS 186

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHN----------FT 233
            S G+    IP+ ++WN SRP WR+GPWNGQ+FIGIPE+ SVYL   N           +
Sbjct: 187 ISGGIDPSRIPQFYIWNGSRPIWRTGPWNGQVFIGIPEMVSVYLDGFNIADEGNGTFTLS 246

Query: 234 FGFANDWTF--FALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
            GFAN+     + L+++G   + +W   + +W   +   + ECDVYGKCG+FG CN ++ 
Sbjct: 247 VGFANESLISNYILSSEGKFGKVLWDDTEGSWRYEWKFPKDECDVYGKCGSFGSCNPKDS 306

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
           PICSCL+GFEPKNA+EWN GNWT+GC+RR +LQCER    G+VGKEDGF KL +MKVPDF
Sbjct: 307 PICSCLKGFEPKNADEWNNGNWTNGCVRRRELQCERTQNGGQVGKEDGFLKLERMKVPDF 366

Query: 352 TEWTSPATEDECREQCLK-NCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVA 410
           +EW S  +E  C+ +CL  NCSCIAY++  G GCM+WR  NL D+++ P    DLYIR+A
Sbjct: 367 SEWLSSTSEHTCKNECLNINCSCIAYSYYPGFGCMLWRG-NLTDLKKFPIKAADLYIRLA 425

Query: 411 NSDVDEK--GKKDVFVSPLIKGMFALAICTLFLWR-----------WIAKRKEVIAKLS- 456
           +S++D K    K +    ++ G  A+AIC  + WR           +++KRK     LS 
Sbjct: 426 DSELDNKKINLKVIISLTVVVGAIAIAICVFYSWRRIDRKRKSKKVFLSKRKVGYPILSD 485

Query: 457 ----ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKR 512
                 N+N VKLQ+LPLF  + L  AT+NF  ++KLGQGGFGPVY G L DGQEIAVKR
Sbjct: 486 ENMIQDNLNHVKLQELPLFSLQTLIAATDNFNTANKLGQGGFGPVYKGNLSDGQEIAVKR 545

Query: 513 LSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL 572
           LS++SGQGLEEFMNEV+VISKLQHRNLVR+LGCCVEGEEKMLIYEYMPN+SLDA LFD L
Sbjct: 546 LSRSSGQGLEEFMNEVVVISKLQHRNLVRILGCCVEGEEKMLIYEYMPNKSLDAFLFDSL 605

Query: 573 KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           +K+ LDW+ RF I+EGI RGLLYLHRDSRLRIIHRDLKASNILLD+ELNPKISDFGMA+I
Sbjct: 606 RKQLLDWKNRFKIVEGICRGLLYLHRDSRLRIIHRDLKASNILLDQELNPKISDFGMARI 665

Query: 633 FGGNQDQADTGRVVGT 648
           FG ++DQA+T RVVGT
Sbjct: 666 FGNHEDQANTRRVVGT 681

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497280|ref|XP_003635472.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Vitis vinifera]

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/642 (61%), Positives = 474/642 (73%), Gaps = 35/642 (5%)

Query: 38  ILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNL 97
           ++SNGS FKLGFF PADS  RY+GIWY  PS   VIWVANRD PL D SGI+TISEDGNL
Sbjct: 229 LVSNGSAFKLGFFTPADSTNRYVGIWYSTPSLSTVIWVANRDKPLTDFSGIVTISEDGNL 288

Query: 98  VLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMH 157
           +++NGQK ++WSSN+SN   NS SAQLLDSGNLVLRDN  R I WES Q P+ SFLP M 
Sbjct: 289 LVMNGQKVIVWSSNLSNAAPNS-SAQLLDSGNLVLRDNSGR-ITWESIQHPSHSFLPKMK 346

Query: 158 HGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFI 217
              +  TG+KV LTSWKS SDPS GSFSAG+   NIP++FVWN S PYWRSGPWNGQIFI
Sbjct: 347 ISTNTHTGEKVVLTSWKSPSDPSIGSFSAGINPLNIPQVFVWNGSHPYWRSGPWNGQIFI 406

Query: 218 GIPELKSVYL------------FRHNFTFGFANDWTFFALTAQGILEERIWIKWKDNWEV 265
           G+PE+ SV+L                FT   ++ + ++ LT +G + +      K+ W+V
Sbjct: 407 GVPEMNSVFLNGFQVVDDKEGTVYETFTLANSSIFLYYVLTPEGTVVKTYREFGKEKWQV 466

Query: 266 GFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQC 325
            + + ++ECDVYG CGA GIC+S   PIC+CL+G++PK  EEW+RGNWT GC+R++ LQC
Sbjct: 467 AWKSNKSECDVYGTCGASGICSSGNSPICNCLKGYKPKYMEEWSRGNWTRGCVRKTPLQC 526

Query: 326 ERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCM 385
           ER N +G+ GK DGF +L  +KVPDF +W S A EDECR+QC KNCSC+AY++   IGCM
Sbjct: 527 ERTNSSGQQGKIDGFFRLTSVKVPDFADW-SLALEDECRKQCFKNCSCVAYSYYSSIGCM 585

Query: 386 VWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKDVFVS-PLIKGMFALAICTLFLWRW 444
            W S N+ID Q+   GG DLYIR+A S++D+K      +S  ++ G  A  ICT F WRW
Sbjct: 586 SW-SGNMIDSQKFTQGGADLYIRLAYSELDKKRDMKAIISVTIVIGTIAFGICTYFSWRW 644

Query: 445 --------------IAKRKEVI----AKLSATNVNTVKLQDLPLFQFEELATATNNFQLS 486
                         ++ R +V       +   + N VK ++LPL   E+LATATNNF  +
Sbjct: 645 RGKQTVKDKSKGILLSDRGDVYQIYDKNMLGDHANQVKFEELPLLALEKLATATNNFHEA 704

Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           + LGQGGFGPVY G+L  GQEIAVKRLS+AS QGLEEFMNEVMVISK+QHRNLVRLLGCC
Sbjct: 705 NMLGQGGFGPVYRGKLPGGQEIAVKRLSRASAQGLEEFMNEVMVISKIQHRNLVRLLGCC 764

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           +EG+EK+LIYEYMPN+SLDA LFDPLK+E LDWRKRF+IIEGI RGLLYLHRDSRLRIIH
Sbjct: 765 IEGDEKLLIYEYMPNKSLDAFLFDPLKREFLDWRKRFSIIEGIGRGLLYLHRDSRLRIIH 824

Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           RDLKASNILLDE+LN KISDFGMA+IFG NQDQA+T RVVGT
Sbjct: 825 RDLKASNILLDEDLNAKISDFGMARIFGSNQDQANTMRVVGT 866

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112032|ref|XP_002332843.1| predicted protein [Populus trichocarpa] gi|222833304|gb|EEE71781.1| predicted protein [Populus trichocarpa]

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/678 (57%), Positives = 492/678 (72%), Gaps = 36/678 (5%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           +A L +LL CFC     A+D+ ITSSQ I+DP+A++S G+ FKLGFF+P +S  RY+GIW
Sbjct: 1   MAALRLLLCCFCWQLGAAVDT-ITSSQYIKDPEAVVSAGNKFKLGFFSPGNSTNRYVGIW 59

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y   S    +W+ANR+ PL DSSGI+TISEDGN+V+++G+KE+LWSSNVSN V+NS SAQ
Sbjct: 60  YSNISVTTPVWIANRNKPLNDSSGIMTISEDGNIVVLDGRKEILWSSNVSNGVSNS-SAQ 118

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           L D GN++LR       +W+SFQEP+D+F+  M    ++RTGKK Q+TSWKS SDPS GS
Sbjct: 119 LTDDGNVILRGGEIGNSLWQSFQEPSDTFMLKMRLTANRRTGKKTQITSWKSPSDPSVGS 178

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------T 233
           FS+G+   +IPE+FVWN SRP+WRSGPWNGQ FIGIPE+ SVYL  +N           +
Sbjct: 179 FSSGIEPSSIPEVFVWNDSRPFWRSGPWNGQAFIGIPEMNSVYLNGYNLVQDGDGTFSLS 238

Query: 234 FGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
            G AN+   T FAL+ +G   E  W    + WE        +CD+YGKCG FG CN+Q  
Sbjct: 239 VGLANESYITNFALSYEGRFGEMYWDSANERWEHKKQYPGDDCDIYGKCGPFGFCNTQNS 298

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
            IC CL+GFEPKN++EWNR NWT+GC+RR +L+CER    G+V KED F KL+K+KVPDF
Sbjct: 299 LICRCLKGFEPKNSDEWNRRNWTNGCVRRRELKCERTQSDGQVPKEDEFLKLDKVKVPDF 358

Query: 352 TEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN 411
           +EW+S A+E  C+++CL NCSCIAY++  GIGCM+WR   L DI++   GG +LY+R+A+
Sbjct: 359 SEWSSSASEQNCKDECLNNCSCIAYSYHTGIGCMLWRG-KLTDIRKFSSGGANLYVRLAD 417

Query: 412 SDVDE-KGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKE-------------------- 450
            +  + +  K V    ++ G   +A+   F WR +AK +E                    
Sbjct: 418 LEFGKNRDMKAVICITVVTGAIIVAVGAFFWWRRMAKYRERKRESERILSSRRKKGYPIF 477

Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAV 510
               L   ++N VK Q+LPLF+ + L  AT+ F  ++KLG+GGFGPVY G L DGQEIAV
Sbjct: 478 FNGNLIQESMNQVKFQELPLFKLQMLIAATDYFDAANKLGEGGFGPVYRGNLPDGQEIAV 537

Query: 511 KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
           KRLS+ASGQG EEFMNEV+VIS+LQHRNLVRLLGCCVEG+EKML+YEYMPN+SLDA LFD
Sbjct: 538 KRLSRASGQGQEEFMNEVVVISELQHRNLVRLLGCCVEGDEKMLVYEYMPNKSLDASLFD 597

Query: 571 PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           P++KE LDW+KRFNI++GI RGLLYLHRDSRLRIIHRDLK SNILLD+ELNPKISDFGMA
Sbjct: 598 PVRKEVLDWKKRFNIVDGICRGLLYLHRDSRLRIIHRDLKPSNILLDQELNPKISDFGMA 657

Query: 631 KIFGGNQDQADTGRVVGT 648
           +IFGGN+D   T RVVGT
Sbjct: 658 RIFGGNEDHVKTRRVVGT 675

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114141|ref|XP_002316678.1| predicted protein [Populus trichocarpa] gi|222859743|gb|EEE97290.1| predicted protein [Populus trichocarpa]

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/678 (56%), Positives = 492/678 (72%), Gaps = 36/678 (5%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           +A L +LL CFC     A+D+ ITSSQ I+DP+A++S G+ FKLGFF+P +S  RY+GIW
Sbjct: 1   MAALRLLLCCFCWQLGAAVDT-ITSSQYIKDPEAVVSAGNKFKLGFFSPGNSTNRYVGIW 59

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y   S    +W+ANR+ PL DSSGI+TISEDGN+V+++G+KE+LWSSNVSN V+NS SAQ
Sbjct: 60  YSNISVTTPVWIANRNKPLNDSSGIMTISEDGNIVVLDGRKEILWSSNVSNGVSNS-SAQ 118

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           L D GN++LR       +W+SFQEP+D+F+  M    ++RTGKK Q+TSWKS SDPS GS
Sbjct: 119 LTDDGNVILRGGEIGNSLWQSFQEPSDTFMLKMRLTANRRTGKKTQITSWKSPSDPSVGS 178

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------T 233
           FS+G+   +IPE+FVWN SRP+WRSGPWNGQ FIGIPE+ SVYL  +N           +
Sbjct: 179 FSSGIEPSSIPEVFVWNDSRPFWRSGPWNGQAFIGIPEMNSVYLNGYNLVQDGDGTFSLS 238

Query: 234 FGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEK 291
            G AN+   T FAL+ +G   E  W    + WE        +CD+YGKCG FG CN+Q  
Sbjct: 239 VGLANESYITNFALSYEGRFGEMYWDSANERWEHKKQYPGDDCDIYGKCGPFGFCNTQNS 298

Query: 292 PICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDF 351
            IC CL+GFEPKN++EWNR NWT+GC+RR +L+CER    G+V KED F KL+K+KVPDF
Sbjct: 299 LICRCLKGFEPKNSDEWNRRNWTNGCVRRRELKCERTQSDGQVPKEDEFLKLDKVKVPDF 358

Query: 352 TEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVAN 411
           +EW+S A+E  C+++CL NCSCIAY++  GIGCM+WR   L DI++   GG +LY+R+A+
Sbjct: 359 SEWSSSASEQNCKDECLNNCSCIAYSYHTGIGCMLWRG-KLTDIRKFSSGGANLYVRLAD 417

Query: 412 SDVDE-KGKKDVFVSPLIKGMFALAICTLFLWRWIAKRKE-------------------- 450
            +  + +  K V    ++ G   +A+   F WR +AK +E                    
Sbjct: 418 LEFGKNRDMKAVICITVVTGAIIVAVGAFFWWRRMAKYRERKRESERILSSRRKKGYPIF 477

Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAV 510
               L   ++N VK Q+LPLF+ + L  AT+ F  ++KLG+GGFGPVY G L DGQEIAV
Sbjct: 478 FNGNLIQESMNQVKFQELPLFKLQMLIAATDYFDAANKLGEGGFGPVYRGNLPDGQEIAV 537

Query: 511 KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
           KRLS+ASGQG EEFMNEV+VIS+LQH+NLVRLLGCCVEG+EKML+YEYMPN+SLDA LFD
Sbjct: 538 KRLSRASGQGQEEFMNEVVVISELQHKNLVRLLGCCVEGDEKMLVYEYMPNKSLDASLFD 597

Query: 571 PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           P++KE LDW+KRFNI++GI RGLLYLHRDSRLRIIHRDLK SNILLD+ELNPKISDFGMA
Sbjct: 598 PVRKEVLDWKKRFNIVDGICRGLLYLHRDSRLRIIHRDLKPSNILLDQELNPKISDFGMA 657

Query: 631 KIFGGNQDQADTGRVVGT 648
           +IFGGN+D   T RVVGT
Sbjct: 658 RIFGGNEDHVKTRRVVGT 675

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078778|ref|XP_002305625.1| predicted protein [Populus trichocarpa] gi|222848589|gb|EEE86136.1| predicted protein [Populus trichocarpa]

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/676 (58%), Positives = 492/676 (72%), Gaps = 34/676 (5%)

Query: 2   IPIALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMG 61
           I +ALL+ L S FC++   AID+ ITS+Q ++DP+AI+SNG+ + LGFF+P +S  RY+G
Sbjct: 8   ISVALLL-LTSSFCVEIITAIDT-ITSTQFLKDPEAIVSNGNIYTLGFFSPVNSTDRYVG 65

Query: 62  IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTS 121
           IW++       IWVANR+NPL DSSGI+ IS+DG LV++NGQ+E+LWS+NVSN V+NS S
Sbjct: 66  IWFNEVPVVTAIWVANRNNPLNDSSGILAISKDGALVVLNGQQEILWSTNVSNFVSNS-S 124

Query: 122 AQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPST 181
           AQL D+GNLVLRDN N  I+WESFQ P+D+F   M    ++RTG K  +TSWKS +DPS 
Sbjct: 125 AQLSDTGNLVLRDNNNEEIMWESFQYPSDTFFSNMKLSANKRTGGKTLITSWKSATDPSI 184

Query: 182 GSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF--------- 232
           GSFSAGL H +IPEIF+W  + PY+RSGPWN  +FIG+P + S  +   N          
Sbjct: 185 GSFSAGLNHLDIPEIFIWKDNYPYFRSGPWNRLVFIGVPYMNSAAVDGLNLVDDGEGTID 244

Query: 233 -TFGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQ 289
            TF +AN    + F LT+QG LE+  W    ++  V +     +C+ YG+CG FG CN+Q
Sbjct: 245 LTFSYANQSIMSSFVLTSQGQLEQTRWEHGMEDRIVLWSVPMFDCEFYGRCGLFGSCNAQ 304

Query: 290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCER-RNITGKVGKEDGFSKLNKMKV 348
             PICSCL GFEP N EEW  GNWT GCIRR  LQCER ++ +   GK D F KL  MKV
Sbjct: 305 ASPICSCLRGFEPNNPEEWYVGNWTGGCIRRKSLQCERVKSESEAAGKNDVFLKLGNMKV 364

Query: 349 PDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIR 408
           PD  +W S  TE EC+++CL NCSCIAYA+D GIGCM W   +LID+Q  P GG DLYIR
Sbjct: 365 PDLAQW-SRLTEIECKDKCLTNCSCIAYAYDSGIGCMSWIG-DLIDVQEFPTGGADLYIR 422

Query: 409 VANSDVDEKGKKDVFV--SPLIKGMFALAICTLFLWRWIAK-RKEVIAK----------- 454
           +A S++D   +K V V  S +I  + +  IC L  WR+++K R E +             
Sbjct: 423 MAYSELDGNHRKKVIVIVSAVIGTITSAMICALLTWRFMSKHRGEKLHSDTNEKHPSFLD 482

Query: 455 --LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKR 512
             ++  +++ VKLQ+LPLF  E L  AT+ F LS+KLGQGGFGPVY G+L DG+EIAVKR
Sbjct: 483 RDMAGDSMDHVKLQELPLFSLESLTAATDGFDLSNKLGQGGFGPVYKGKLSDGKEIAVKR 542

Query: 513 LSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL 572
           LS+ASGQGL+EFMNEV VISKLQHRNLVRLLGCCVEGEEK+L+YEYMPN+SLDA L+DPL
Sbjct: 543 LSRASGQGLKEFMNEVEVISKLQHRNLVRLLGCCVEGEEKLLVYEYMPNKSLDAFLYDPL 602

Query: 573 KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           +K+ LDW+KRFNIIEGI RGLLYLHRDSRLRIIHRDLKASNILLD EL PKISDFG A+I
Sbjct: 603 RKQLLDWKKRFNIIEGICRGLLYLHRDSRLRIIHRDLKASNILLDPELKPKISDFGAARI 662

Query: 633 FGGNQDQADTGRVVGT 648
           FGG++DQA+T RVVGT
Sbjct: 663 FGGDEDQANTIRVVGT 678

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496519|ref|XP_002263029.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Vitis vinifera]

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/704 (57%), Positives = 495/704 (70%), Gaps = 66/704 (9%)

Query: 4   IALLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
           +  L++LLS  C  F  AID+ +TS++ I DP+ ++S+GS FKLGFF+ ADS  RY+GIW
Sbjct: 9   VIALLLLLSVICFGFCTAIDT-MTSTRFIEDPETLVSDGSAFKLGFFSLADSTNRYVGIW 67

Query: 64  YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQ 123
           Y  PS   +IWVANRD PL DSSG++TISEDGNL+++NGQKE+ WS+NVSN   NS SAQ
Sbjct: 68  YSTPSLSTIIWVANRDKPLNDSSGLVTISEDGNLLVMNGQKEIFWSTNVSNAAANS-SAQ 126

Query: 124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
           LLDSGNLVLRDN  R I WES Q P+ SFLP M    D  +G+KV LTSWKS SDPS GS
Sbjct: 127 LLDSGNLVLRDNSGR-ITWESIQHPSHSFLPKMKISADTDSGEKVVLTSWKSPSDPSIGS 185

Query: 184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIG-----IPELKSVYLFRHNF------ 232
           FS G+   NIP+ FVWN S PYWRSGPWNGQIFIG     +P++ SV+L    F      
Sbjct: 186 FSLGMNPLNIPQAFVWNGSHPYWRSGPWNGQIFIGQIYIGVPKMNSVFLNGFGFQVVDDK 245

Query: 233 ------TFGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFG 284
                 TF  AN   + ++ LT QG + E      K+ WEV + +  +ECDVYG CGAFG
Sbjct: 246 AGTVYETFTLANSSIFLYYVLTPQGTVVETYREDGKEEWEVTWRSNNSECDVYGTCGAFG 305

Query: 285 ICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLN 344
           ICNS   PICSCL G+EPK  EEW+RGNWTSGC+R++ LQCER N +G+ GK DGF +L 
Sbjct: 306 ICNSGNSPICSCLRGYEPKYIEEWSRGNWTSGCVRKTPLQCERTNSSGQQGKLDGFFRLT 365

Query: 345 KMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTD 404
            +KVPDF +W S A EDECREQCLKNCSC+AY++  GIGCM W S NLID+ +   GG D
Sbjct: 366 TVKVPDFADW-SLALEDECREQCLKNCSCMAYSYYSGIGCMSW-SGNLIDLGKFTQGGAD 423

Query: 405 LYIRVANSDVD-----------------EKGKKDVFVSPLIKGMFALAICTLFLWRWIAK 447
           LYIR+ANS+++                 ++  K +    ++ G  A+ I T F WRW  +
Sbjct: 424 LYIRLANSELEWNMRTPKLIKHLMATYKKRDMKAIISVTIVIGTIAIGIYTYFSWRW--R 481

Query: 448 RKEVIAKLS--------------------ATNVNTVKLQDLPLFQFEELATATNNFQLSS 487
           RK+ +   S                      N N  KL++LPL   E+L TATNNF  ++
Sbjct: 482 RKQTVKDKSKEILLSDRGDAYQIYDMNRLGDNANQFKLEELPLLALEKLETATNNFHEAN 541

Query: 488 KLGQGGFGPVY---WGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           KLGQGGFGPVY    G+L  GQEIAVKRLS+AS QGLEEF NEV+VISK+QHRNLVRLLG
Sbjct: 542 KLGQGGFGPVYRVMLGKLPGGQEIAVKRLSRASAQGLEEFGNEVVVISKIQHRNLVRLLG 601

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
            C+EG+EK+LIYEYMPN+SLD+ LFDPLK++ LDWR+RFNIIEGI RGLLYLHRDSR RI
Sbjct: 602 YCIEGDEKLLIYEYMPNKSLDSFLFDPLKRDFLDWRRRFNIIEGIGRGLLYLHRDSRFRI 661

Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           IHRDLKASNILLDE+L  KISDFG+A+I GGNQDQA+T RVVGT
Sbjct: 662 IHRDLKASNILLDEDLTAKISDFGIARIVGGNQDQANTMRVVGT 705

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084622|emb|CBI25710.3| unnamed protein product [Vitis vinifera]

 Score =  761 bits (1966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/662 (59%), Positives = 489/662 (73%), Gaps = 26/662 (3%)

Query: 9   ILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPS 68
           +LL+CF   F  +   +ITS+  I+DP+ I+S+G  FKLGFF+   S  RY+GIWY+  S
Sbjct: 11  LLLTCFWFVFGCSAIDTITSTHFIKDPETIVSSGRVFKLGFFSLDGSSNRYVGIWYNTTS 70

Query: 69  EKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSG 128
              +IWVAN+D PL DSSG++TISEDGN+ ++NG+KE+LWSSNVSN    ++SAQL DSG
Sbjct: 71  LLTIIWVANKDRPLNDSSGVLTISEDGNIQVLNGRKEILWSSNVSNPAAVNSSAQLQDSG 130

Query: 129 NLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGL 188
           NLVLRD  N   VWES Q P+ SF+P M    + RT  +  LTSWKS SDPS GSF+AG+
Sbjct: 131 NLVLRDK-NGVSVWESLQNPSHSFVPQMKISTNTRTRVRKVLTSWKSSSDPSMGSFTAGV 189

Query: 189 IHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF----------TFGFAN 238
              NIP++F+WN SRPYWRSGPW+GQI  G+ ++K + L   N           TF    
Sbjct: 190 EPLNIPQVFIWNGSRPYWRSGPWDGQILTGV-DVKWITLDGLNIVDDKEGTVYVTFAHPE 248

Query: 239 DWTFFA--LTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSC 296
              F+A  LT +GIL E    K  ++WE  +     EC++YGKCG FG CNS++ PICSC
Sbjct: 249 SGFFYAYVLTPEGILVETSRDKRNEDWERVWTTKENECEIYGKCGPFGHCNSRDSPICSC 308

Query: 297 LEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTS 356
           L+G+EPK+ +EWNRGNWT GC+R++ LQCER     +  K DGF KL  MKVPDF E  S
Sbjct: 309 LKGYEPKHTQEWNRGNWTGGCVRKTPLQCERTKNGSEEAKVDGFLKLTNMKVPDFAE-QS 367

Query: 357 PATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDE 416
            A ED+CR+QCL+NCSCIAY++  GIGCM W S +LIDIQ+L   G +L+IRVA+S++ +
Sbjct: 368 YALEDDCRQQCLRNCSCIAYSYYTGIGCMWW-SGDLIDIQKLSSTGANLFIRVAHSELKQ 426

Query: 417 KGKKDV---FVSPLIKGMFALAICTLFLWRWIAKRKE--VIAKLS-----ATNVNTVKLQ 466
             K+D     +  +I G  A+A+CT FL RWIA+++   +I K S        VN VKL+
Sbjct: 427 DRKRDARVIVIVTVIIGTIAIALCTYFLRRWIARQRGNLLIGKFSDPSVPGDGVNQVKLE 486

Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
           +LPL  F +LATATNNF  ++KLGQGGFGPVY G+L +GQ+IAVKRLS+AS QGLEEFMN
Sbjct: 487 ELPLIDFNKLATATNNFHEANKLGQGGFGPVYRGKLAEGQDIAVKRLSRASTQGLEEFMN 546

Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           EV+VISKLQHRNLVRL+GCC+EG+EKMLIYE+MPN+SLDA LFDP+K++ LDWR RF II
Sbjct: 547 EVVVISKLQHRNLVRLIGCCIEGDEKMLIYEFMPNKSLDASLFDPVKRQILDWRTRFKII 606

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
           EGI RGLLYLHRDSRLRIIHRDLKASNILLDE+LNPKISDFGMA+IFG NQDQA+T RVV
Sbjct: 607 EGIGRGLLYLHRDSRLRIIHRDLKASNILLDEDLNPKISDFGMARIFGSNQDQANTKRVV 666

Query: 647 GT 648
           GT
Sbjct: 667 GT 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147840284|emb|CAN63987.1| hypothetical protein VITISV_016155 [Vitis vinifera]

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/677 (57%), Positives = 475/677 (70%), Gaps = 59/677 (8%)

Query: 12  SCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKA 71
           S  C  F  A D+ ITS+Q I+DP+ ++SNGS FK+GFF+P +S  RY GIWY+  S   
Sbjct: 17  SGLCFQFCTATDT-ITSTQFIKDPETMVSNGSLFKMGFFSPGNSTKRYFGIWYNSTSLFT 75

Query: 72  VIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLV 131
           VIW+ANR+NPL DSSGI+ +SEDGNL+++N QKE+ WSSNVSN   NS  AQLLDSGNLV
Sbjct: 76  VIWIANRENPLNDSSGIVMVSEDGNLLVLNDQKEIFWSSNVSNAALNS-RAQLLDSGNLV 134

Query: 132 LRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQ 191
           L+D  +  I W+SFQ P+ +FL  M    + +TG+K  LTSWKS SDPS GSFS G+   
Sbjct: 135 LQDKNSGRITWQSFQHPSHAFLQKMELSENMKTGEKQGLTSWKSPSDPSVGSFSTGIDPS 194

Query: 192 NIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFR----------HNFTFGFANDWT 241
           +IPEIFVWN SRP+WRSGPWNGQ  IG+P++  +  F             F   +A+   
Sbjct: 195 DIPEIFVWNGSRPFWRSGPWNGQTLIGVPDMNYLNGFHIVNDKEGNVSVTFEHAYASILW 254

Query: 242 FFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFE 301
           ++ L+ QG + E        NWE+ + + +TECDVYGKCGAFGICN++  PICSCL G+E
Sbjct: 255 YYVLSPQGTIVEIYSDDGMKNWEITWQSRKTECDVYGKCGAFGICNAKNSPICSCLRGYE 314

Query: 302 PKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATED 361
           P+N EEW+RGNWT GC+R++  QCE+ N + + G+ DGF +L  +KVPDF EW S A ED
Sbjct: 315 PRNIEEWSRGNWTGGCVRKTPFQCEKINGSMEEGEADGFIRLTTVKVPDFAEW-SLALED 373

Query: 362 ECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDEKGKKD 421
           +C+E CLKNCSCIAYA+  GIGCM W S NL D+Q+    G DLYIRV  S++       
Sbjct: 374 DCKEFCLKNCSCIAYAYYTGIGCMSW-SRNLTDVQKFSSNGADLYIRVPYSEL------- 425

Query: 422 VFVSPLIKGMFALAICTLFLWRWI---------------AKRKEVIAKLSATNV-----N 461
                   G   +A+   F  RWI               + R +V   +S  N+     N
Sbjct: 426 --------GTIFVAVFIYFSRRWITKRRAKNKKRKEMLSSDRGDVHLNVSDANILGDRMN 477

Query: 462 TVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----------WGRLKDGQEIAVK 511
            VKL++LPL  F +L TATNNF  ++KLGQGGFG VY           GRL +GQEIAVK
Sbjct: 478 QVKLEELPLVDFGKLVTATNNFDEANKLGQGGFGSVYRVMLAHLELHGGRLPEGQEIAVK 537

Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
           RLS+AS QGLEEFMNEV+VISKLQHRNLVRLLGCC+EG+EKMLIYEYMP +SLDALLFDP
Sbjct: 538 RLSRASAQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLIYEYMPKKSLDALLFDP 597

Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L++E LDW+KRF+IIEGI RGLLYLHRDSRLRIIHRDLKASNILLD  LNPKISDFGMA+
Sbjct: 598 LRQETLDWKKRFSIIEGIGRGLLYLHRDSRLRIIHRDLKASNILLDXNLNPKISDFGMAR 657

Query: 632 IFGGNQDQADTGRVVGT 648
           IFGGNQDQA+T RVVGT
Sbjct: 658 IFGGNQDQANTIRVVGT 674

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	649
TAIR|locus:2200888	804	AT1G61500 [Arabidopsis thalian	0.964	0.778	0.448	3.4e-141
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.973	0.785	0.434	4.3e-141
TAIR|locus:2197664	804	AT1G61490 [Arabidopsis thalian	0.976	0.788	0.440	1.1e-140
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.967	0.783	0.430	4.9e-140
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.286	0.219	0.704	1.7e-139
TAIR|locus:2197744	807	AT1G61420 [Arabidopsis thalian	0.970	0.780	0.437	7.2e-139
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.628	0.521	0.377	1.9e-138
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.662	0.505	0.360	2.4e-138
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.691	0.532	0.336	6.5e-138
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.972	0.779	0.430	2.8e-137

TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
 Identities = 297/662 (44%), Positives = 407/662 (61%)

Query:    10 LLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSN-FKLGFFNPADSPYRYMGIWYDMPS 68
             L + F         S++ +++        LS+ +  ++LGFF+P ++  +Y+GIW+    
Sbjct:    10 LFTMFLFTLLSGSSSAVITTESPLSMGQTLSSANEVYELGFFSPNNTQDQYVGIWFKDTI 69

Query:    69 EKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQLLDSG 128
              + V+WVANR+ P+ DS+  + IS  G+L+L+NG K                 A+L DSG
Sbjct:    70 PRVVVWVANREKPVTDSTAYLAISSSGSLLLLNG-KHGTVWSSGVTFSSSGCRAELSDSG 128

Query:   129 NLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGL 188
             NL + DN++   +W+SF    D+ L       +  T +K  LTSWKS +DPS G F  G 
Sbjct:   129 NLKVIDNVSERALWQSFDHLGDTLLHTSSLTYNLATAEKRVLTSWKSYTDPSPGDF-LGQ 187

Query:   189 IHQNIP-EIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYL--FR-HNFTFG------FAN 238
             I   +P + FV   S PYWRSGPW    F GIP +   Y   F  H    G      F  
Sbjct:   188 ITPQVPSQGFVMRGSTPYWRSGPWAKTRFTGIPFMDESYTGPFTLHQDVNGSGYLTYFQR 247

Query:   239 DWTF--FALTAQGILEERIWIKWKDN---WEVGFLNLRTECDVYGKCGAFGICNSQEKPI 293
             D+      LT++G ++      ++DN   WE+ +   +  CD YG CG FG+C     P+
Sbjct:   248 DYKLSRITLTSEGSIK-----MFRDNGMGWELYYEAPKKLCDFYGACGPFGLCVMSPSPM 302

Query:   294 CSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTE 353
             C C  GF PK+ EEW RGNWT GC+R ++L C   N TG+    D F ++  +K PDF E
Sbjct:   303 CKCFRGFVPKSVEEWKRGNWTGGCVRHTELDC-LGNSTGE--DADDFHQIANIKPPDFYE 359

Query:   354 WTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSD 413
             + S    +EC ++C+ NCSC+A+A+  GIGC+VW   +L+D  +    G  L IR+A S+
Sbjct:   360 FASSVNAEECHQRCVHNCSCLAFAYIKGIGCLVWNQ-DLMDAVQFSATGELLSIRLARSE 418

Query:   414 VD-EKGKKDVFVSPLIKGMFALAICTLF-LWRWIAKRKEVIAKLSATN-VNTVKLQDLPL 470
             +D  K KK +  S +   +F +   T F +WR    R E IA +S     N +K QD+P 
Sbjct:   419 LDGNKRKKTIVASIVSLTLFMILGFTAFGVWRC---RVEHIAHISKDAWKNDLKPQDVPG 475

Query:   471 FQFEELAT---ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE 527
               F ++ T   ATNNF LS+KLGQGGFG VY G+L+DG+EIAVKRLS +SGQG EEFMNE
Sbjct:   476 LDFFDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNE 535

Query:   528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++ISKLQHRNLVR+LGCC+E EEK+LIYE+M N+SLD  LFD  K+  +DW KRF+II+
Sbjct:   536 IVLISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDTFLFDSRKRLEIDWPKRFDIIQ 595

Query:   588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
             GI+RGLLYLH DSRLR+IHRDLK SNILLDE++NPKISDFG+A+++ G + Q +T RVVG
Sbjct:   596 GIARGLLYLHHDSRLRVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVG 655

Query:   648 TL 649
             TL
Sbjct:   656 TL 657

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
 Identities = 291/669 (43%), Positives = 415/669 (62%)

Query:     1 MIPIALLIILLSCFCLDFAVAIDSSITSSQL-IRDPDAILSNGSNFKLGFFNPADSPYRY 59
             M+  A L++L+      +A AI+   TSS L IR    + S G  ++LGFF+P ++  +Y
Sbjct:     3 MVLFACLLLLIIFPTCGYA-AIN---TSSPLSIRQ--TLSSPGGFYELGFFSPNNTQNQY 56

Query:    60 MGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXX 119
             +GIW+     + V+WVANRD P+  S+  +TIS +G+L+L++G K+              
Sbjct:    57 VGIWFKKIVPRVVVWVANRDTPVTSSAANLTISSNGSLILLDG-KQDVIWSTGKAFTSNK 115

Query:   120 TSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDP 179
               A+LLD+GN V+ D+++   +W+SF+   ++ LP      D   GKK  LT+WKS SDP
Sbjct:   116 CHAELLDTGNFVVIDDVSGNKLWQSFEHLGNTMLPQSSLMYDTSNGKKRVLTTWKSNSDP 175

Query:   180 STGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYL--FR-------- 229
             S G FS  +  Q   +  +   S PYWR GPW    F GI  + + Y+  F         
Sbjct:   176 SPGEFSLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGIDASYVSPFSVVQDTAAG 235

Query:   230 -HNFTFGFANDW--TFFALTAQGILEERIWIKWKD--NWEVGFLNLRTECDVYGKCGAFG 284
               +F++    ++  ++  LT +G ++    I W D  NW++        CD+YG+CG +G
Sbjct:   236 TGSFSYSTLRNYNLSYVTLTPEGKMK----ILWDDGNNWKLHLSLPENPCDLYGRCGPYG 291

Query:   285 ICNSQEKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKE-DGFSKL 343
             +C   + P C CL+GF PK+ EEW +GNWTSGC+RR+KL C+ ++     GK+ D F ++
Sbjct:   292 LCVRSDPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQAKSSMKTQGKDTDIFYRM 351

Query:   344 NKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGT 403
               +K PD  ++ S    ++C + CL NCSC A+A+  GIGC+VW    L D  +    G 
Sbjct:   352 TDVKTPDLHQFASFLNAEQCYQGCLGNCSCTAFAYISGIGCLVWNG-ELADTVQFLSSGE 410

Query:   404 DLYIRVANSDVDEKGKKDVFVSPLIK-GMFALAI-CTLFLWRWIAKRKEVIAK-LSATNV 460
              L+IR+A+S++    ++ + V   +   +F + +   + LWR+ AK+ +         +V
Sbjct:   411 FLFIRLASSELAGSSRRKIIVGTTVSLSIFLILVFAAIMLWRYRAKQNDAWKNGFERQDV 470

Query:   461 NTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG 520
             + V       F+   + TATNNF  S+KLGQGGFGPVY G+L DG+EI VKRL+ +SGQG
Sbjct:   471 SGVNF-----FEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQG 525

Query:   521 LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
              EEFMNE+ +ISKLQHRNLVRLLG C++GEEK+LIYE+M N+SLD  +FDP  K  LDW 
Sbjct:   526 TEEFMNEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWP 585

Query:   581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
             KRFNII+GI+RGLLYLHRDSRLR+IHRDLK SNILLD+ +NPKISDFG+A++F G Q Q 
Sbjct:   586 KRFNIIQGIARGLLYLHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQD 645

Query:   641 DTGRVVGTL 649
             +T RVVGTL
Sbjct:   646 NTRRVVGTL 654

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]

 Score = 1376 (489.4 bits), Expect = 1.1e-140, P = 1.1e-140
 Identities = 290/659 (44%), Positives = 403/659 (61%)

Query:     8 IILLSCFCLDFAVAIDSS---ITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWY 64
             I+  +C  L F V +  S   IT+   +     + S+   ++LGFF+P +S   Y+GIW+
Sbjct:     6 IVFFACLLL-FTVLLRFSYAGITTESPLSVEQTLSSSNGIYELGFFSPNNSQNLYVGIWF 64

Query:    65 DMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQL 124
                  + V+WVANR+ P  D+S  + IS +G+L+L NG K               + A+L
Sbjct:    65 KGIIPRVVVWVANRETPTTDTSANLAISSNGSLLLFNG-KHGVVWSIGENFASNGSRAEL 123

Query:   125 LDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSF 184
              D+GNLV+ DN +   +WESF+   D+ LP      +  TG+K  LTSWK+ +DPS G F
Sbjct:   124 TDNGNLVVIDNASGRTLWESFEHFGDTMLPFSSLMYNLATGEKRVLTSWKTDTDPSPGVF 183

Query:   185 SAGLIHQNIP-EIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGFANDWTFF 243
               G I   +P ++ +   S  Y+R+GPW    F GIP +   Y    +     AN   FF
Sbjct:   184 -VGQITPQVPSQVLIMRGSTRYYRTGPWAKTRFTGIPLMDDTYASPFSLQQD-ANGSGFF 241

Query:   244 ALTAQGILEERIWI-------KWKDN---WEVGFLNLRTECDVYGKCGAFGICNSQEKPI 293
                 +     RI I       +++ N   WE+ ++     CD+YG CG FG+C       
Sbjct:   242 TYFDRSFKLSRIIISSEGSMKRFRHNGTDWELSYMAPANSCDIYGVCGPFGLCIVSVPLK 301

Query:   294 CSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTE 353
             C CL+GF P + EEW RGNWT GC R ++L C+  N TGK    + F  +  +K+PDF E
Sbjct:   302 CKCLKGFVPHSTEEWKRGNWTGGCARLTELHCQG-NSTGK--DVNIFHPVTNVKLPDFYE 358

Query:   354 WTSPATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSD 413
             + S    +EC + CL NCSC+A+A+  GIGC++W   NL+D  +   GG  L IR+A+S+
Sbjct:   359 YESSVDAEECHQSCLHNCSCLAFAYIHGIGCLIWNQ-NLMDAVQFSAGGEILSIRLAHSE 417

Query:   414 VD-EKGKKDVFVSPLIKGMFALAICTLF-LWRWIAKRKEVIAKLSATN-VNTVKLQDLPL 470
             +   K  K +  S +   +F +     F  WR+  K K    K +  N + + ++  L  
Sbjct:   418 LGGNKRNKIIVASTVSLSLFVILTSAAFGFWRYRVKHKAYTLKDAWRNDLKSKEVPGLEF 477

Query:   471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMV 530
             F+   + TATNNF LS+KLGQGGFG VY G+L+DG+EIAVK+LS +SGQG EEFMNE+++
Sbjct:   478 FEMNTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKQLSSSSGQGKEEFMNEIVL 537

Query:   531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
             ISKLQHRNLVR+LGCC+EGEEK+LIYE+M N+SLD  +FD  KK  +DW KRF+I++GI+
Sbjct:   538 ISKLQHRNLVRVLGCCIEGEEKLLIYEFMLNKSLDTFVFDARKKLEVDWPKRFDIVQGIA 597

Query:   591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
             RGLLYLHRDSRL++IHRDLK SNILLDE++NPKISDFG+A+++ G Q Q  T RVVGTL
Sbjct:   598 RGLLYLHRDSRLKVIHRDLKVSNILLDEKMNPKISDFGLARMYEGTQCQDKTRRVVGTL 656

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 284/660 (43%), Positives = 408/660 (61%)

Query:    10 LLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSE 69
             L S   L F+ A   +IT +  +     + S    F+LGFF+P +S   Y+GIW+     
Sbjct:     8 LFSTLLLSFSYA---AITPTSPLSIGQTLSSPNGIFELGFFSPNNSRNLYVGIWFKGIIP 64

Query:    70 KAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQLLDSGN 129
             + V+WVANR+N + D++  + IS +G+L+L +G K               +SA+L DSGN
Sbjct:    65 RTVVWVANRENSVTDATADLAISSNGSLLLFDG-KHSTVWSTGETFASNGSSAELSDSGN 123

Query:   130 LVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLI 189
             L++ D ++   +W+SF+   D+ LP      +  TG+K  L+SWKS +DP  G F   + 
Sbjct:   124 LLVIDKVSGITLWQSFEHLGDTMLPYSSLMYNPGTGEKRVLSSWKSYTDPLPGEFVGYIT 183

Query:   190 HQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFTFGF-ANDWTFFA---- 244
              Q  P+ F+   S+PYWRSGPW    F G+P     Y   H F+    AN   +F+    
Sbjct:   184 TQVPPQGFIMRGSKPYWRSGPWAKTRFTGVPLTDESYT--HPFSVQQDANGSVYFSHLQR 241

Query:   245 --------LTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSC 296
                     LT++G L  ++      +W +        CD YG CG FG+C     P C C
Sbjct:   242 NFKRSLLVLTSEGSL--KVTHHNGTDWVLNIDVPANTCDFYGVCGPFGLCVMSIPPKCKC 299

Query:   297 LEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTS 356
              +GF P+ +EEW RGNWT GC+RR++L C+  N TG+    + F  +  +K PDF E+ S
Sbjct:   300 FKGFVPQFSEEWKRGNWTGGCVRRTELLCQG-NSTGR--HVNVFHPVANIKPPDFYEFVS 356

Query:   357 PATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDE 416
               + +EC + CL NCSC+A+A+  GIGC++W    L+D+ +   GG  L IR+A+S++  
Sbjct:   357 SGSAEECYQSCLHNCSCLAFAYINGIGCLIWNQ-ELMDVMQFSVGGELLSIRLASSEMGG 415

Query:   417 KGKKDVFVSPLIK-GMFA-LAICTLFLWRWIAKRKEVIAKLSATNV--NTVKLQDLPLFQ 472
               +K   ++ ++   +F  LA      WR+  K   +++K+S      N +K +D+    
Sbjct:   416 NQRKKTIIASIVSISLFVTLASAAFGFWRYRLKHNAIVSKVSLQGAWRNDLKSEDVSGLY 475

Query:   473 FEELAT---ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVM 529
             F E+ T   ATNNF L +KLGQGGFGPVY G+L+DG+EIAVKRLS +SGQG EEFMNE++
Sbjct:   476 FFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIL 535

Query:   530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
             +ISKLQH NLVR+LGCC+EGEE++L+YE+M N+SLD  +FD  K+  +DW KRF+II+GI
Sbjct:   536 LISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFDSRKRVEIDWPKRFSIIQGI 595

Query:   590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
             +RGLLYLHRDSRLRIIHRD+K SNILLD+++NPKISDFG+A+++ G + Q +T R+VGTL
Sbjct:   596 ARGLLYLHRDSRLRIIHRDVKVSNILLDDKMNPKISDFGLARMYEGTKYQDNTRRIVGTL 655

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 700 (251.5 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 131/186 (70%), Positives = 159/186 (85%)

Query:   463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
             V   +LP+F    +A ATN+F   ++LG+GGFGPVY G L+DG+EIAVKRLS  SGQG++
Sbjct:   509 VNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVD 568

Query:   523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
             EF NE+++I+KLQHRNLVRLLGCC EGEEKML+YEYMPN+SLD  LFD  K+  +DW+ R
Sbjct:   569 EFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLR 628

Query:   583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
             F+IIEGI+RGLLYLHRDSRLRIIHRDLK SN+LLD E+NPKISDFGMA+IFGGNQ++A+T
Sbjct:   629 FSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGGNQNEANT 688

Query:   643 GRVVGT 648
              RVVGT
Sbjct:   689 VRVVGT 694

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
 Identities = 289/660 (43%), Positives = 400/660 (60%)

Query:     9 ILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPS 68
             +LLS F   F  +  + IT    +     + S+   ++LGFFN  +S  +Y+GIW+    
Sbjct:    12 LLLSSF---FISSSSAGITKESPLPIGQTLSSSNGFYELGFFNFNNSQNQYVGIWFKGII 68

Query:    69 EKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQLLDSG 128
              + V+WVANR+ P+ DS+  + IS +G+L+L NG K               + A+L D+G
Sbjct:    69 PRVVVWVANREKPVTDSTANLAISNNGSLLLFNG-KHGVAWSSGEALVSNGSRAELSDTG 127

Query:   129 NLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGL 188
             NL++ DN +   +W+SF    D+ LP      +  TG+K  L+SWKS +DPS G F   +
Sbjct:   128 NLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPSVGDFVLQI 187

Query:   189 IHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLF----------RHNFTFGFAN 238
               Q   ++ V   S PY+RSGPW    F GIP +   +              + T+   N
Sbjct:   188 TPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDTFTGPVSVQQDTNGSGSLTYLNRN 247

Query:   239 D-WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCL 297
             D      LT++G  +E  W    D W + F+     CD YG CG FG+C     P C+C 
Sbjct:   248 DRLQRTMLTSKGT-QELSWHNGTD-WVLNFVAPEHSCDYYGVCGPFGLCVKSVPPKCTCF 305

Query:   298 EGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSP 357
             +GF PK  EEW RGNWT GC+RR++L C+  N TGK      F  + ++K PDF E+ S 
Sbjct:   306 KGFVPKLIEEWKRGNWTGGCVRRTELYCQG-NSTGKYANV--FHPVARIKPPDFYEFASF 362

Query:   358 ATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVD-E 416
                +EC++ CL NCSC+A+A+  GIGC++W   +L+D  +   GG  L IR+A S++   
Sbjct:   363 VNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQ-DLMDAVQFSEGGELLSIRLARSELGGN 421

Query:   417 KGKKDVFVSPLIKGMFALAICTLF-LWRWIAKRKEVIAKLSATNV---NTVKLQDLP--- 469
             K KK +  S +   +  +     F  WR+  K    I    A+ V   N +K QD+P   
Sbjct:   422 KRKKAITASIVSLSLVVIIAFVAFCFWRYRVKHNADITT-DASQVSWRNDLKPQDVPGLD 480

Query:   470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVM 529
              F    + TATNNF +S+KLGQGGFGPVY G+L+DG+EIAVKRLS +SGQG EEFMNE++
Sbjct:   481 FFDMHTIQTATNNFSISNKLGQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIV 540

Query:   530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
             +ISKLQH+NLVR+LGCC+EGEEK+LIYE+M N SLD  LFD  K+  +DW KR +II+GI
Sbjct:   541 LISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGI 600

Query:   590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
             +RG+ YLHRDS L++IHRDLK SNILLDE++NPKISDFG+A+++ G + Q +T RVVGTL
Sbjct:   601 ARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTL 660

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 762 (273.3 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
 Identities = 167/442 (37%), Positives = 251/442 (56%)

Query:     6 LLIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYD 65
             L+I L S   L  A A D  I ++Q ++D D I+S G +F++GFF+P  S  RY+GIWY 
Sbjct:    10 LIISLFSTILL--AQATDILI-ANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYK 66

Query:    66 MPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTS---- 121
               S + V+WVANRD+PL D SG + +SE+G+L L N +                +     
Sbjct:    67 KISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPI 126

Query:   122 AQLLDSGNLVLRDN-INRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS 180
              Q+LD+GNLV+R++  ++  +W+S   P D FLPGM +G++  TG    LTSW+++ DPS
Sbjct:   127 VQILDTGNLVVRNSGDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPS 186

Query:   181 TGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNF-------- 232
             TG+++  +    +P+ F+   S   +R+GPWNG  F G+P LK   ++R+ +        
Sbjct:   187 TGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTEEEVY 246

Query:   233 -TFGFAND--WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQ 289
              T+   N    T   L   G L+   W+    +W      +   CD Y  CG++G CN  
Sbjct:   247 YTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSCNIN 306

Query:   290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVP 349
             E P C CL+GF  K  + W  G+W+ GC+RR KL C      GK G EDGF K++K+K+P
Sbjct:   307 ESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDC------GK-G-EDGFLKISKLKLP 358

Query:   350 DF-TEWTSPATE-DECREQCLKNCSCIAYA-FD---GGIGCMVWRSINLIDIQRLPFGGT 403
             D  T W     + +EC++ CL+NC+C AY+ FD   GG GC++W   +LIDI+     G 
Sbjct:   359 DTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFG-DLIDIREYNENGQ 417

Query:   404 DLYIRVANSDVDEKGKKDVFVS 425
             DLY+R+A+S+++   ++   VS
Sbjct:   418 DLYVRLASSEIETLQRESSRVS 439

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 2.4e-138, Sum P(2) = 2.4e-138
 Identities = 170/472 (36%), Positives = 259/472 (54%)

Query:     7 LIILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPA-DSPYRYMGIWYD 65
             L+IL   + +    A   S + S  I   + I+S G+ F+LGFF P  DS + Y+GIWY 
Sbjct:    18 LLILFPAYSIS---ANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRW-YLGIWYK 73

Query:    66 MPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTS--AQ 123
               S++  +WVANRD PL  S G + IS D NLV+++ Q +              +   A+
Sbjct:    74 AISKRTYVWVANRDTPLSSSIGTLKIS-DSNLVVLD-QSDTPVWSTNLTGGDVRSPLVAE 131

Query:   124 LLDSGNLVLRDNINRA---IVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS 180
             LLD+GN VLRD+ N A   ++W+SF  PTD+ LP M  G D +TG    + SWKS  DPS
Sbjct:   132 LLDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPS 191

Query:   181 TGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFT------- 233
             +G FS  L  +  PEIF+WN     +RSGPWNG  F G+PE++       NFT       
Sbjct:   192 SGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVT 251

Query:   234 FGFA---ND-WTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQ 289
             + F    +D ++  ++++ G+L+   WI+   NW   +   + +CD Y +CG +G C+S 
Sbjct:   252 YSFRITKSDVYSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSN 311

Query:   290 EKPICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVP 349
               P+C+C++GF+P+N + W   + + GC+R++ L C         G  DGF +L KMK+P
Sbjct:   312 TSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSC---------GGGDGFVRLKKMKLP 362

Query:   350 DFTEWTSPAT--EDECREQCLKNCSCIAYA-FD---GGIGCMVWRSINLIDIQRLPFGGT 403
             D T  +        EC ++CL++C+C A+A  D    G GC+ W    L DI+    GG 
Sbjct:   363 DTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTG-ELFDIRNYAKGGQ 421

Query:   404 DLYIRVANSDVDEKGKKDVFV--SPL-IKGMFALAICTLFLWRWIAKRKEVI 452
             DLY+R+A +D+++K  +   +  S + +  +  L+    FLW+   KR  +I
Sbjct:   422 DLYVRLAATDLEDKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILI 473

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
 Identities = 163/484 (33%), Positives = 261/484 (53%)

Query:     5 ALLIILLSCFCLDFAVAIDS-SITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIW 63
             +  I L+    L F+V+ ++ S T S  I     I+S    F+LGFFNPA S   Y+GIW
Sbjct:    10 SFFIFLILILFLAFSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIW 69

Query:    64 YDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQ 123
             Y +   +  +WVANRDNPL  S+G + IS +  ++     +                +A+
Sbjct:    70 YKIIPIRTYVWVANRDNPLSSSNGTLKISGNNLVIFDQSDRPVWSTNITGGDVRSPVAAE 129

Query:   124 LLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGS 183
             LLD+GN +LRD+ NR ++W+SF  PTD+ L  M  G DQ+TG    L SWK+  DPS+G 
Sbjct:   130 LLDNGNFLLRDSNNR-LLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGE 188

Query:   184 FSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYLFRHNFT-------FGF 236
             FS  L     PE ++ +     +RSGPWNG  F  +P    V    +NFT       + +
Sbjct:   189 FSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSY 248

Query:   237 ----ANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKP 292
                  N ++   L + G+L+   W +   +W+  + + +  CD Y  CG FG C+S   P
Sbjct:   249 RINKTNLYSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLP 308

Query:   293 ICSCLEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFT 352
              C C++GF+P N + W+  + ++GC+R+++L C+ R         DGF++L +MK+PD T
Sbjct:   309 NCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGR---------DGFTRLKRMKLPDTT 359

Query:   353 EWTSPATE---DECREQCLKNCSCIAYAF----DGGIGCMVWRSINLIDIQRLPFGGTDL 405
               T    E     C+E+CL++C+C A+A     +GG GC++W    ++D++    GG DL
Sbjct:   360 A-TIVDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTR-EILDMRNYAKGGQDL 417

Query:   406 YIRVANSDVDEKG-KKDVFVSPLIKGMFALAICTLFLWR-WIAKRKEVIAKLSATNVNTV 463
             Y+R+A +++++K  K +  +   I G+  L + +  ++  W  K+K  I  +   NV+ V
Sbjct:   418 YVRLAAAELEDKRIKNEKIIGSSI-GVSILLLLSFVIFHFWKRKQKRSIT-IQTPNVDQV 475

Query:   464 KLQD 467
             + QD
Sbjct:   476 RSQD 479

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
 Identities = 285/662 (43%), Positives = 408/662 (61%)

Query:     8 IILLSCFCLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMP 67
             ++L++ F L F+ A    IT    +     + S+   ++LGFF+  +S  +Y+GIW+   
Sbjct:    12 LLLITIF-LSFSYA---GITRESPLSIGKTLSSSNGVYELGFFSFNNSQNQYVGIWFKGI 67

Query:    68 SEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEXXXXXXXXXXXXXXTSAQLLDS 127
               + V+WVANR+ P+ DS+  +TIS +G+L+L N +                + A+L D+
Sbjct:    68 IPRVVVWVANREKPVTDSAANLTISSNGSLLLFN-ENHSVVWSIGETFASNGSRAELTDN 126

Query:   128 GNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAG 187
             GNLV+ DN +   +WESF+   D+ LP  +   +  TG+K  LTSWKS +DPS G F+  
Sbjct:   127 GNLVVIDNNSGRTLWESFEHFGDTMLPFSNLMYNLATGEKRVLTSWKSHTDPSPGDFTVQ 186

Query:   188 LIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVYL--FR--------HNFTFGFA 237
             +  Q   +      S+ YWRSGPW    F GIP +   Y   F          +FT+   
Sbjct:   187 ITPQVPSQACTMRGSKTYWRSGPWAKTRFTGIPVMDDTYTSPFSLQQDTNGSGSFTYFER 246

Query:   238 N-DWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSC 296
             N   ++  +T++G L  +I+     +WE+ F      CD+YG CG FGIC     P C C
Sbjct:   247 NFKLSYIMITSEGSL--KIFQHNGMDWELNFEAPENSCDIYGFCGPFGICVMSVPPKCKC 304

Query:   297 LEGFEPKNAEEWNRGNWTSGCIRRSKLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTS 356
              +GF PK+ EEW RGNWT GC+R ++L C+  N  GK    +GF  +  +K PDF E+ S
Sbjct:   305 FKGFVPKSIEEWKRGNWTDGCVRHTELHCQG-NTNGKT--VNGFYHVANIKPPDFYEFAS 361

Query:   357 PATEDECREQCLKNCSCIAYAFDGGIGCMVWRSINLIDIQRLPFGGTDLYIRVANSDVDE 416
                 + C + CL NCSC+A+A+  GIGC++W   +L+D  +   GG  L IR+A+S++  
Sbjct:   362 FVDAEGCYQICLHNCSCLAFAYINGIGCLMWNQ-DLMDAVQFSAGGEILSIRLASSELGG 420

Query:   417 KGKKDVFVSPLIK-GMFA-LAICTLFLWRWIAKR--KEVIAKLSATNV--NTVKLQD--- 467
               +  + V+ ++   +F  LA       R+  K      I+K+++     N ++ QD   
Sbjct:   421 NKRNKIIVASIVSLSLFVILAFAAFCFLRYKVKHTVSAKISKIASKEAWNNDLEPQDVSG 480

Query:   468 LPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE 527
             L  F+   + TAT+NF LS+KLGQGGFG VY G+L+DG+EIAVKRLS +SGQG EEFMNE
Sbjct:   481 LKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNE 540

Query:   528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++ISKLQH+NLVR+LGCC+EGEE++L+YE++ N+SLD  LFD  K+  +DW KRFNIIE
Sbjct:   541 IVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDTFLFDSRKRLEIDWPKRFNIIE 600

Query:   588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
             GI+RGL YLHRDS LR+IHRDLK SNILLDE++NPKISDFG+A+++ G + Q +T RV G
Sbjct:   601 GIARGLHYLHRDSCLRVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVAG 660

Query:   648 TL 649
             TL
Sbjct:   661 TL 662

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00010996001 SubName- Full=Chromosome undetermined scaffold_298, whole genome shotgun sequence; (813 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	649
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-43
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-43
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-38
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-38
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-38
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-37
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	7e-37
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-33
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-32
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	6e-31
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-29
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	2e-29
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	6e-29
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-27
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-26
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-24
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	2e-24
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	8e-24
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-23
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-23
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-23
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-23
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-23
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	7e-23
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-22
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-22
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-22
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-22
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	5e-22
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-22
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-21
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-21
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-21
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-21
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-20
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-20
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-20
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-20
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-19
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-19
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-19
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-19
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-19
pfam08276	66	pfam08276, PAN_2, PAN-like domain	1e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-18
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-18
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-18
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-18
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-18
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-18
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-18
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	6e-18
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-17
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-17
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-17
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-17
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-17
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	6e-17
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-17
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-17
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-17
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	9e-17
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-16
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-16
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-16
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-16
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-16
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-16
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-16
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-16
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-16
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-16
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-16
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-16
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	5e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-16
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	8e-16
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	9e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-15
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-15
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-15
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-15
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-15
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-15
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-15
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-15
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-15
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-15
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-15
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-15
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-15
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	8e-15
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	9e-15
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	9e-15
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-14
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-14
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-14
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-14
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-14
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	4e-14
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-14
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-14
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-14
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	6e-14
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-14
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	7e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	7e-14
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-13
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-13
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-13
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-13
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-13
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-13
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-13
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-13
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-13
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-13
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-13
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	5e-13
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	7e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-13
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-12
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-12
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-12
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-12
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-12
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	6e-12
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-12
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	7e-12
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	7e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	8e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	9e-12
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	9e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-11
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-11
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-11
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-11
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-11
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-11
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-11
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-11
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-11
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-11
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-11
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-10
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-10
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-10
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-10
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-10
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-10
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-10
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-10
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-10
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-10
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-10
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-10
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-09
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-09
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	9e-09
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-08
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-08
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-08
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-08
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-08
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-08
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	3e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	4e-08
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-08
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	7e-08
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	8e-08
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-07
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-07
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-07
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-07
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	3e-07
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-07
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-07
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-07
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	4e-07
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-06
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-06
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	4e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-06
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	6e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	7e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	7e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	7e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	4e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-05
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	7e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	7e-05
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-04
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	3e-04
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	4e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	4e-04
COG1718	268	COG1718, RIO1, Serine/threonine protein kinase inv	4e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	6e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	7e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.001
cd00129	80	cd00129, PAN_APPLE, PAN/APPLE-like domain; present	0.001
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	0.002
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.002
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.002
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.003
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.003
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.003
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	0.003

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  156 bits (396), Expect = 2e-43
 Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 11/154 (7%)

Query: 484 QLSSKLGQGGFGPVYWGRLKD-----GQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHR 537
            L  KLG+G FG VY G+LK        E+AVK L + AS Q +EEF+ E  ++ KL H 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+LLG C E E   ++ EYM    L + L     + +L      +    I+RG+ YL 
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRK--NRPKLSLSDLLSFALQIARGMEYLE 119

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  IHRDL A N L+ E L  KISDFG+++
Sbjct: 120 ---SKNFIHRDLAARNCLVGENLVVKISDFGLSR 150

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  154 bits (392), Expect = 7e-43
 Identities = 64/153 (41%), Positives = 84/153 (54%), Gaps = 10/153 (6%)

Query: 485 LSSKLGQGGFGPVYWGRLKDG-----QEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRN 538
           L  KLG+G FG VY G LK        E+AVK L + AS Q +EEF+ E  ++ KL H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+LLG C E E  M++ EYMP   L   L    + + L      +    I+RG+ YL  
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKN-RPKELSLSDLLSFALQIARGMEYLE- 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 IHRDL A N L+ E L  KISDFG+++
Sbjct: 121 --SKNFIHRDLAARNCLVGENLVVKISDFGLSR 151

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  143 bits (362), Expect = 1e-38
 Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 14/155 (9%)

Query: 488 KLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRL 542
           KLG+G FG VY G+LK       E+AVK L + AS +  ++F+ E  V+ KL H N+VRL
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNIIEGISRGLLYL 596
           LG C E E   L+ EYM    L   L      F   +K  L  +   +    I++G+ YL
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 + +HRDL A N L+ E+L  KISDFG+++
Sbjct: 122 A---SKKFVHRDLAARNCLVGEDLVVKISDFGLSR 153

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  141 bits (358), Expect = 1e-38
 Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 10/164 (6%)

Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           LG+GGFG VY  R  K G+++A+K + K  S   LEE + E+ ++ KL H N+V+L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
            +     L+ EY    SL  LL +   + +L   +   I+  I  GL YLH      IIH
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKE--NEGKLSEDEILRILLQILEGLEYLH---SNGIIH 115

Query: 607 RDLKASNILLDE-ELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           RDLK  NILLD      K++DFG++K+   ++    T  +VGT 
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGTP 157

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  142 bits (361), Expect = 2e-38
 Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 11/155 (7%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-----GQEIAVKRL-SKASGQGLEEFMNEVMVISKLQH 536
            +L  KLG+G FG VY G LK        ++AVK L   AS +  EEF+ E  ++ KL H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N+VRLLG C +GE   ++ EYMP   L   L      E+L  +    +   I++G+ YL
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRK--HGEKLTLKDLLQMALQIAKGMEYL 118

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                   +HRDL A N L+ E L  KISDFG+++
Sbjct: 119 E---SKNFVHRDLAARNCLVTENLVVKISDFGLSR 150

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  139 bits (353), Expect = 2e-37
 Identities = 61/170 (35%), Positives = 82/170 (48%), Gaps = 11/170 (6%)

Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNL 539
           ++L  KLG G FG VY  + K  G+ +AVK L K     +  +    E+ ++ +L H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           VRL+    + +   L+ EY     L   L    +   L   +   I   I RGL YLH  
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHS- 116

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               IIHRDLK  NILLDE    KI+DFG+AK    +     T   VGT 
Sbjct: 117 --NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT--FVGTP 162

Length = 260

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score =  132 bits (335), Expect = 7e-37
 Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 5/113 (4%)

Query: 69  EKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSG 128
            + V+WVANR NPL DSS  + +  DGNLVL +G   V+WSSN S   +    A L D G
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSG-CVAVLQDDG 59

Query: 129 NLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRT-GKKVQLTSWKSLSDPS 180
           NLVL DN +  ++W+SF  PTD+ LPG          G   +LTSWKS +DPS
Sbjct: 60  NLVLYDN-SGKVLWQSFDHPTDTLLPGQ--KDGNVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  129 bits (326), Expect = 1e-33
 Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 19/176 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN 538
            +     LG+G FG VY    KD G+ +AVK   LS  S + LE    E+ ++S LQH N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 539 LVRLLGCCVEGEEKML-IY-EYMPNRSLDALL--FDPLKKERLDWRKRF--NIIEGISRG 592
           +VR  G   + E+  L I+ EY+   SL +LL  F  L +  +   +++   I+EG++  
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVI---RKYTRQILEGLA-- 115

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             YLH      I+HRD+K +NIL+D +   K++DFG AK  G  +    TG V GT
Sbjct: 116 --YLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGT 166

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  125 bits (316), Expect = 2e-32
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 13/170 (7%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLV 540
           +++  KLG+G FG VY  R K  G+ +A+K + K   +   E  + E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLYLHRD 599
           RL     + ++  L+ EY     L  LL    K+ RL     RF  +  I   L YLH  
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLL---KKRGRLSEDEARF-YLRQILSALEYLHS- 115

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               I+HRDLK  NILLDE+ + K++DFG+A+     + +  T   VGT 
Sbjct: 116 --KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGE-KLTT--FVGTP 160

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score =  116 bits (293), Expect = 6e-31
 Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 29  SQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGI 88
           S  +     ++S+GS F+LGFF        Y  I Y   S + V+WVANRDNP   SS  
Sbjct: 1   SNPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYK-GSSRTVVWVANRDNP-SGSSCT 58

Query: 89  ITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEP 148
           +T+  DGNLV+ +G   V+WSSN + +  N     LLD GNLVL D+    + W+SF  P
Sbjct: 59  LTLQSDGNLVIYDGSGTVVWSSNTTRVNGN-YVLVLLDDGNLVLYDSDGNFL-WQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  116 bits (294), Expect = 2e-29
 Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 15/172 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQHRN 538
           N+QL   +G+G FG VY G  L+ G  +A+K++S  K   + L+  M E+ ++  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYL 596
           +V+ +G     +   +I EY  N SL  ++  F P   E L     + +++G    L YL
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFP-ESLVAVYVYQVLQG----LAYL 115

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           H      +IHRD+KA+NIL  ++   K++DFG+A           +  VVGT
Sbjct: 116 HEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGT 162

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  111 bits (281), Expect = 2e-29
 Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 19/114 (16%)

Query: 206 WRSGPWNGQIFIGIPELKSVYLFRHNF---------TFGFANDWTF--FALTAQGILEER 254
           WRSGPWNG  F GIPE++ +  + +NF         T+   N+  +    L+++G LE  
Sbjct: 1   WRSGPWNGIRFSGIPEMQKLSYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSLERF 60

Query: 255 IWIK----WKDNWEVGFLNLRTECDVYGKCGAFGICNSQEKPICSCLEGFEPKN 304
            WI     W   W       + +CDVYG+CG +G C+    P C+C++GF PKN
Sbjct: 61  TWIPNSQDWNLFWSAP----KDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score =  110 bits (278), Expect = 6e-29
 Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 5/117 (4%)

Query: 29  SQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGI 88
           S  +     ++S  S F+LGFF        Y  I Y   S + V+WVANRDNP+ DS   
Sbjct: 1   SNTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILYK-SSSRTVVWVANRDNPVSDS-CT 57

Query: 89  ITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF 145
           +T+  DGNLVL +G   V+WSSN +   N +    LLD GNLV+ D+ +   +W+SF
Sbjct: 58  LTLQSDGNLVLYDGDGRVVWSSNTTG-ANGNYVLVLLDDGNLVIYDS-DGNFLWQSF 112

Length = 114

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  110 bits (277), Expect = 4e-27
 Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 18/158 (11%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           F++  K+G+GGFG VY  R  + G+E+A+K +   S +  E+ +NE+ ++ K +H N+V+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRGLLY 595
             G  ++ +E  ++ E+    SL  LL            +         + + + +GL Y
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLL--------KSTNQTLTESQIAYVCKELLKGLEY 113

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           LH      IIHRD+KA+NILL  +   K+ DFG++   
Sbjct: 114 LHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  106 bits (267), Expect = 9e-26
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           F L  KLG G FG V+ G  K+   +A+K L        ++F  EV  + +L+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
              C  GE   +I E M   SL A L  P  +  L      ++   ++ G+ YL      
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQV-LPVASLIDMACQVAEGMAYLEEQ--- 123

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKI 632
             IHRDL A NIL+ E+L  K++DFG+A++
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARL 153

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  103 bits (258), Expect = 2e-24
 Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 13/159 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQ 535
           + +   +LG+G FG V   R        G+++AVK L+ +   Q   +F  E+ ++  L 
Sbjct: 5   HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD 64

Query: 536 HRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           H N+V+  G C +  G    LI EY+P+ SL   L     +++++ ++       I +G+
Sbjct: 65  HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYL--QRHRDQINLKRLLLFSSQICKGM 122

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
            YL      R IHRDL A NIL++ E   KISDFG+AK+
Sbjct: 123 DYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKV 158

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 96.7 bits (241), Expect = 2e-24
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 8/90 (8%)

Query: 322 KLQCERRNITGKVGKEDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFD-G 380
            L C         G  DGF KL  +K+PD     +  + +ECRE CL NCSC AYA++ G
Sbjct: 2   PLNCGGD------GSTDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNG 55

Query: 381 GIGCMVWRSINLIDIQRLPFGGTDLYIRVA 410
             GC++W    L +++ L  GG  LY+R+A
Sbjct: 56  SGGCLLWNG-LLNNLRSLSSGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  100 bits (252), Expect = 8e-24
 Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 7/164 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+ G      ++AVK L K      E F+ E  ++ KL+H  LV
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +L   C E E   ++ EYM   SL D L     KK RL   +  ++   I+ G+ YL   
Sbjct: 65  QLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLP--QLVDMAAQIAEGMAYLES- 121

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
                IHRDL A NIL+ E L  KI+DFG+A++   ++  A  G
Sbjct: 122 --RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  100 bits (251), Expect = 1e-23
 Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 14/165 (8%)

Query: 489 LGQGGFGPVY---WGRLKDGQEI--AVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY   W    +  +I  A+K L + +  +  +E ++E  V++ + H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           LG C+   +  LI + MP   L   + +   K+ +  +   N    I++G+ YL      
Sbjct: 75  LGICL-SSQVQLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYL---EEK 128

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           R++HRDL A N+L+    + KI+DFG+AK+   ++ +  A+ G+V
Sbjct: 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV 173

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  100 bits (251), Expect = 2e-23
 Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 20/176 (11%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF----MNEVMVISKLQHR 537
           ++  +++G+G +G VY  R  K G+ +A+K++   + +  E F    + E+ ++ KL+H 
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK--EGFPITAIREIKLLQKLRHP 58

Query: 538 NLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRF--NIIEGISRGL 593
           N+VRL        +    +++EYM +  L  LL  P  K      K +   ++EG+    
Sbjct: 59  NIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQ--- 114

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
            YLH +    I+HRD+K SNIL++ +   K++DFG+A+ +        T RV+ TL
Sbjct: 115 -YLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  102 bits (254), Expect = 2e-23
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH-R 537
           ++++  KLG+G FG VY    +D + +A+K L+K      + +E F+ E+ +++ L H  
Sbjct: 1   SYRILRKLGEGSFGEVY--LARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+L     +     L+ EY+   SL+ LL    +K  L   +   I+  I   L YLH
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 598 RDSRLRIIHRDLKASNILLDEELN-PKISDFGMAKIFGGNQD 638
                 IIHRD+K  NILLD +    K+ DFG+AK+      
Sbjct: 119 ---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157

Length = 384

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 99.3 bits (248), Expect = 3e-23
 Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 20/165 (12%)

Query: 489 LGQGGFGPVYWG--RLKDGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           LG G FG V  G   +K G+E+  AVK L +     G +EF+ E  V+++L H  +VRL+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLHRDS 600
           G C +GE  ML+ E  P   L  LL   LKK R       ++ E    ++ G+ YL    
Sbjct: 63  GVC-KGEPLMLVMELAP---LGPLL-KYLKKRRE--IPVSDLKELAHQVAMGMAYLESK- 114

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD--QADTG 643
               +HRDL A N+LL      KISDFGM++  G   D  +A T 
Sbjct: 115 --HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 98.8 bits (246), Expect = 5e-23
 Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 12/166 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L  KLG G FG V+ G      ++A+K L + S    E F+ E  ++ +LQH  LV
Sbjct: 6   ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLV 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEGISRGLLYLH 597
           RL    V  E   +I EYM N SL     D LK     +L   K  ++   I+ G+ ++ 
Sbjct: 65  RLYAV-VTQEPIYIITEYMENGSL----VDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R +    IHRDL+A+NIL+ E L  KI+DFG+A++   N+  A  G
Sbjct: 120 RKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 98.2 bits (245), Expect = 7e-23
 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 16/163 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L + +G+G FG V  G  + GQ++AVK L K      + F+ E  V++ L+H NLV
Sbjct: 6   KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLV 63

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK-KER----LDWRKRFNIIEGISRGLLY 595
           +LLG  ++G    ++ EYM   SL     D L+ + R    L  +  F +   +  G+ Y
Sbjct: 64  QLLGVVLQGNPLYIVTEYMAKGSL----VDYLRSRGRAVITLAQQLGFAL--DVCEGMEY 117

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           L        +HRDL A N+L+ E+L  K+SDFG+AK     QD
Sbjct: 118 LEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD 157

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 18/172 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            N +   K+G+G  G VY       G+E+A+K++ +   Q  E  +NE++++   +H N+
Sbjct: 22  KNLE---KIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNI 77

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNIIEGISRGLLYL 596
           V      + G+E  ++ EYM   SL  ++   F  + + ++ +     +   + +GL YL
Sbjct: 78  VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAY-----VCREVLQGLEYL 132

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           H      +IHRD+K+ NILL ++ + K++DFG A      + + ++  VVGT
Sbjct: 133 HS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS--VVGT 179

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 96.5 bits (241), Expect = 3e-22
 Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 21/176 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQHRN 538
           ++ +    LGQG  G VY  R K  G+  A+K++      +  ++ + E+  +   +   
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN--IIEGISR----G 592
           +V+  G   +  E  ++ EYM   SL  LL    KK       +    ++  I+R    G
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLL----KK-----VGKIPEPVLAYIARQILKG 111

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           L YLH      IIHRD+K SN+L++ +   KI+DFG++K+     DQ +T   VGT
Sbjct: 112 LDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT--FVGT 163

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 96.8 bits (241), Expect = 4e-22
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSK-ASGQGLEEFMNEVMVISKL 534
             +   +LG+G FG VY G L           +A+K L + A  +  +EF  E  ++S L
Sbjct: 6   AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL 65

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DPLKKERLDWRK 581
           QH N+V LLG C + +   +++EY+ +  L   L              D   K  LD   
Sbjct: 66  QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSD 125

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +I   I+ G+ YL   S    +HRDL A N L+ E L  KISDFG+++
Sbjct: 126 FLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 96.4 bits (240), Expect = 4e-22
 Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 12/159 (7%)

Query: 487 SKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
            +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  E+ ++  LQH N+V+
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69

Query: 542 LLGCCVE-GEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
             G C   G   + L+ EY+P  SL   L     +ERLD RK       I +G+ YL   
Sbjct: 70  YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK--HRERLDHRKLLLYASQICKGMEYL--- 124

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              R +HRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 125 GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 95.7 bits (239), Expect = 4e-22
 Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 18/167 (10%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   R KD G+  A+K L K      + +E  + E  ++S++ H  +V+L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSR 601
              + EEK+ L+ EY P   L    F  L KE    + R RF   E I   L YLH    
Sbjct: 60  YAFQTEEKLYLVLEYAPGGEL----FSHLSKEGRFSEERARFYAAE-IVLALEYLHS--- 111

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           L II+RDLK  NILLD + + K++DFG+AK       + +T    GT
Sbjct: 112 LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FCGT 156

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 95.6 bits (238), Expect = 5e-22
 Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G FG VY G LK   E+AVK         L  +F+ E  ++ +  H N+V+L+G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           V+ +   ++ E +P  SL  L F   KK RL  +K   +    + G+ YL  +S+   IH
Sbjct: 62  VQKQPIYIVMELVPGGSL--LTFLRKKKNRLTVKKLLQMSLDAAAGMEYL--ESK-NCIH 116

Query: 607 RDLKASNILLDEELNPKISDFGMAK 631
           RDL A N L+ E    KISDFGM++
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 94.9 bits (237), Expect = 8e-22
 Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 19/170 (11%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           ++G+G FG VY  R   DG+   +K   LS  S +  E+ +NEV ++ KL H N+++   
Sbjct: 7   QIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE 66

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF---NIIE---GISRGLLYLHR 598
              E  +  ++ EY     L   +     K++    K F    I++    +   L YLH 
Sbjct: 67  SFEEKGKLCIVMEYADGGDLSQKI-----KKQKKEGKPFPEEQILDWFVQLCLALKYLH- 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            SR +I+HRD+K  NI L      K+ DFG++K+     D A T  VVGT
Sbjct: 121 -SR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGT 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 94.9 bits (236), Expect = 1e-21
 Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 15/173 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRN 538
           +F++ +K+G+G FG V+    K D +  A+K+  LSK + +  EE ++E  V++KL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK---ERLDWRKRFNIIEGISRGLLY 595
           ++R     ++  +  ++ EY  N  L  LL     +   E   WR        I  GL +
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWR----FFIQILLGLAH 116

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LH     +I+HRD+K+ N+ LD   N KI D G+AK+   N + A+T  +VGT
Sbjct: 117 LHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGT 164

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 95.2 bits (237), Expect = 1e-21
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)

Query: 489 LGQGGFGPVYWGR---LKDGQE---IAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVR 541
           LG+G FG V+ G    L+   +   +AVK L + +     + F  E  +++  QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLKKERLDWRKRFNIIEGIS 590
             G C EG+  ++++EYM +  L+  L                   L   +   I   I+
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            G++YL   +    +HRDL   N L+  +L  KI DFGM++
Sbjct: 133 SGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR 170

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 94.7 bits (236), Expect = 1e-21
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 10/159 (6%)

Query: 489 LGQGGFGPVYWGRLK--DGQEI--AVKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G FG V  GRLK    +EI  A+K L + +S +   +F+ E  ++ +  H N++RL 
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G   +    M+I EYM N SLD  L +     +    +   ++ GI+ G+ YL   S + 
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFLRE--NDGKFTVGQLVGMLRGIASGMKYL---SEMN 126

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            +HRDL A NIL++  L  K+SDFG+++    ++    T
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTT 165

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 93.1 bits (232), Expect = 3e-21
 Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 10/167 (5%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           F +  KLG+G +G VY    K+ GQ +A+K +     + L+E + E+ ++ +     +V+
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
             G   +  +  ++ EY    S+  ++   +  + L   +   I+    +GL YLH    
Sbjct: 63  YYGSYFKNTDLWIVMEYCGAGSVSDIM--KITNKTLTEEEIAAILYQTLKGLEYLHS--- 117

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            + IHRD+KA NILL+EE   K++DFG++        + +T  V+GT
Sbjct: 118 NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGT 162

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 91.9 bits (229), Expect = 1e-20
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRNL 539
           F L   +G+G FG VY    K   Q +A+K   L +A  + +E+   E+  +S+ +   +
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDE-IEDIQQEIQFLSQCRSPYI 61

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
            +  G  ++G +  +I EY    S      D LK  +LD      I+  +  GL YLH +
Sbjct: 62  TKYYGSFLKGSKLWIIMEYCGGGSC----LDLLKPGKLDETYIAFILREVLLGLEYLHEE 117

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
                IHRD+KA+NILL EE + K++DFG++        + +T   VGT
Sbjct: 118 ---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT--FVGT 161

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 90.9 bits (226), Expect = 2e-20
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 11/166 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + QL  KLG G FG V+ G   +   +AVK L K      ++F+ E  ++ KL+H  L+
Sbjct: 6   TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLI 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L   C   E   ++ E M   SL     + L+       K   +I+    ++ G+ YL 
Sbjct: 65  QLYAVCTLEEPIYIVTELMKYGSL----LEYLQGGAGRALKLPQLIDMAAQVASGMAYLE 120

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
             +    IHRDL A N+L+ E    K++DFG+A++   +  +A  G
Sbjct: 121 AQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 90.1 bits (223), Expect = 4e-20
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 11/166 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+ G   +  ++AVK L K     ++ F+ E  ++  LQH  LV
Sbjct: 6   ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEGISRGLLYLH 597
           RL     + E   +I EYM   SL     D LK +   ++   K  +    I+ G+ Y+ 
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSL----LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R +    IHRDL+A+N+L+ E L  KI+DFG+A++   N+  A  G
Sbjct: 121 RKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 89.8 bits (223), Expect = 5e-20
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 16/151 (10%)

Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLS-----KASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  L DG   AVK +S     +   + +++   E+ ++SKLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           LG   E +   +  E +P  SL  LL  +    +  +           I  GL YLH   
Sbjct: 68  LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIR-----LYTRQILLGLEYLH--D 120

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           R   +HRD+K +NIL+D     K++DFGMAK
Sbjct: 121 R-NTVHRDIKGANILVDTNGVVKLADFGMAK 150

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 89.6 bits (222), Expect = 8e-20
 Identities = 56/151 (37%), Positives = 75/151 (49%), Gaps = 15/151 (9%)

Query: 489 LGQGGFGPVYWGRLK-----DGQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVRL 542
           LG+G FG V            G+ +AVK L +  GQ     +  E+ ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC E   K   LI EY+P  SL     D L K +L+  +     + I  G+ YLH   
Sbjct: 72  KGCCSEQGGKGLQLIMEYVPLGSL----RDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ- 126

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHRDL A N+LLD +   KI DFG+AK
Sbjct: 127 --HYIHRDLAARNVLLDNDRLVKIGDFGLAK 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 88.4 bits (219), Expect = 2e-19
 Identities = 58/169 (34%), Positives = 83/169 (49%), Gaps = 19/169 (11%)

Query: 489 LGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G +G VY  R    Q  IA+K + +   + ++    E+ + S L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 548 EGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNII---EGISRGLLYLHRDSR 601
           E     +  E +P  SL ALL   + PLK           II   + I  GL YLH    
Sbjct: 76  ENGFFKIFMEQVPGGSLSALLRSKWGPLKD------NEQTIIFYTKQILEGLKYLH---D 126

Query: 602 LRIIHRDLKASNILLDEELNP-KISDFGMAKIFGGNQDQADTGRVVGTL 649
            +I+HRD+K  N+L++      KISDFG +K   G     +T    GTL
Sbjct: 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET--FTGTL 173

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 5e-19
 Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFM-NEVMVISKLQ---H 536
           ++  +++G+G +G VY  R L  G+ +A+K++    S +G+      E+ ++ +L+   H
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60

Query: 537 RNLVRLLGCC----VEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
            N+VRLL  C     + E K+ L++E++ ++ L   L     K  L      +++  + R
Sbjct: 61  PNIVRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYL-SKCPKPGLPPETIKDLMRQLLR 118

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           G+ +LH     RI+HRDLK  NIL+  +   KI+DFG+A+I+ 
Sbjct: 119 GVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 86.7 bits (215), Expect = 6e-19
 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 6/143 (4%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE 548
           LG G FG V+ G+ +   ++A+K + + +    ++F+ E  V+ KL H NLV+L G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRD 608
                ++ EYM N  L   L +   K   +W    ++   +   + YL  +     IHRD
Sbjct: 71  QRPIFIVTEYMANGCLLNYLRERKGKLGTEW--LLDMCSDVCEAMEYLESNG---FIHRD 125

Query: 609 LKASNILLDEELNPKISDFGMAK 631
           L A N L+ E+   K+SDFG+A+
Sbjct: 126 LAARNCLVGEDNVVKVSDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.4 bits (214), Expect = 8e-19
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 16/159 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKR-----LSKASGQGLEEFMNEVMVISKL 534
            N++    LGQG FG VY     D G+E+AVK+      S  + + +     E+ ++  L
Sbjct: 2   TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL 61

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DAL-LFDPLKKERLDWRKRFNIIEGISRG 592
           QH  +V+  GC  + E   +  EYMP  S+ D L  +  L  E +  +    I+EG+   
Sbjct: 62  QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALT-ETVTRKYTRQILEGVE-- 118

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             YLH +    I+HRD+K +NIL D   N K+ DFG +K
Sbjct: 119 --YLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 152

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 87.4 bits (217), Expect = 9e-19
 Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 31/189 (16%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF----MNEVMVIS 532
           +   ++++  KLG+G FG VY  R +K G+ +A+K++   + +  + F    + E+ ++ 
Sbjct: 5   SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILK 62

Query: 533 KLQHRNLVRLLGCCVE-----GEEKMLIYEYMP--NRSLDALLFDPLKKERLDWRKRF-- 583
           KL+H N+V L+   VE       ++  +Y   P  +  L  LL +P          +   
Sbjct: 63  KLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENP--------SVKLTE 114

Query: 584 ----NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
                 +  +  G+ YLH +    I+HRD+KA+NIL+D +   KI+DFG+A+ + G    
Sbjct: 115 SQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPN 171

Query: 640 ADTGRVVGT 648
              G   GT
Sbjct: 172 PKGGGGGGT 180

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score = 80.0 bits (198), Expect = 1e-18
 Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)

Query: 335 GKEDGFSKLNKMKVPDFTEWT--SPATEDECREQCLKNCSCIAYAFD---GGIGCMVWRS 389
           G  DGF +L  MK+PD T           EC ++CL NCSC AYA+    GG GC++W  
Sbjct: 2   GGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRGGSGCLIWTG 61

Query: 390 INLIDI 395
             L+D+
Sbjct: 62  -ELVDM 66

Length = 66

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 86.0 bits (214), Expect = 1e-18
 Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 19/169 (11%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF----MNEVMVISKLQHRNLVRL 542
           KLG+G +G VY  R  K G+ +A+K++        E      + E+ ++ +L+H N+V+L
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHPNIVKL 63

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRGLLYLHRDS 600
           L       +  L++EY  +  L   L         +  K   + ++    RGL Y H   
Sbjct: 64  LDVIHTERKLYLVFEYC-DMDLKKYLDKRPGPLSPNLIKSIMYQLL----RGLAYCHSH- 117

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
             RI+HRDLK  NIL++ +   K++DFG+A+ F G   +  T  VV TL
Sbjct: 118 --RILHRDLKPQNILINRDGVLKLADFGLARAF-GIPLRTYTHEVV-TL 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 6/160 (3%)

Query: 485 LSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NLV+LL
Sbjct: 10  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLL 68

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C       +I E+M   +L   L +   ++ ++      +   IS  + YL + +   
Sbjct: 69  GVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKN--- 124

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 125 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 19/170 (11%)

Query: 483 FQLSSKLGQGGFGPVYWGRLK--DG--QEIAVK--RLSKASGQGLEEFMNEVMVISKLQH 536
            +L   LG+G FG V  G+L   DG   ++AVK  +L   +   +EEF++E   +    H
Sbjct: 1   LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH 60

Query: 537 RNLVRLLGCCVEGEEK------MLIYEYMPNRSLDALLFDP---LKKERLDWRKRFNIIE 587
            N+++L+G C E          M+I  +M +  L + L         E+L  +     + 
Sbjct: 61  PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMV 120

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGGN 636
            I+ G+ YL   S    IHRDL A N +L E++   ++DFG++ KI+ G+
Sbjct: 121 DIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGD 167

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 85.2 bits (211), Expect = 3e-18
 Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 19/165 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWG----RLKDGQEIAVK---RLSKASGQGLEEFMNEVMVISKL 534
           +  L   LG G FG VY G    R  D  E+ V         S Q   +F+ E +++SK 
Sbjct: 7   SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF 66

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VRL+G   E   + ++ E M    L + L +    P +   L  +        ++
Sbjct: 67  NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAK 631
           +G  YL  +     IHRD+ A N LL  +  P    KI+DFGMA+
Sbjct: 127 KGCKYLEEN---HFIHRDIAARNCLLTCK-GPGRVAKIADFGMAR 167

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 84.2 bits (208), Expect = 4e-18
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           L  ++G G FG V+ G   + +++A+K + + +    E+F+ E  V+ KL H  LV+L G
Sbjct: 8   LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYG 66

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
            C E     L++E+M +  L   L    ++ +        +   +  G+ YL   +   +
Sbjct: 67  VCTERSPICLVFEFMEHGCLSDYL--RAQRGKFSQETLLGMCLDVCEGMAYLESSN---V 121

Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           IHRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 85.1 bits (210), Expect = 4e-18
 Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 19/167 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
           +N  L  +LG+G FG V+          +D   +AVK L  AS    ++F  E  +++ L
Sbjct: 5   HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 64

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD----------ALLFDPLKKERLDWRKRFN 584
           QH ++V+  G CVEG+  ++++EYM +  L+           L+ +  +   L   +  +
Sbjct: 65  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           I + I+ G++YL   +    +HRDL   N L+ E L  KI DFGM++
Sbjct: 125 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 168

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 84.6 bits (210), Expect = 4e-18
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 13/164 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEF-MNEVMVISKL-Q 535
           ++F+    +G+G F  V   + K   +E A+K L K     +   ++   E  V+++L  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           H  +++L     + EE +  + EY PN  L   +    K   LD +        I   L 
Sbjct: 61  HPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYI---RKYGSLDEKCTRFYAAEILLALE 116

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           YLH      IIHRDLK  NILLD++++ KI+DFG AK+   N  
Sbjct: 117 YLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 84.1 bits (208), Expect = 6e-18
 Identities = 56/161 (34%), Positives = 82/161 (50%), Gaps = 22/161 (13%)

Query: 489 LGQGGFGPVYWGRLKD-------GQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLV 540
           LG G FG VY G   D          +AVK L K A+ Q  +EF+ E  ++S   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----LDWRKRFNIIEGISRGLLY 595
           +LLG C+  E + +I E M    L + L D  + ER     L  ++  +I   +++G +Y
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDA-RVERFGPPLLTLKELLDICLDVAKGCVY 121

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNP-----KISDFGMAK 631
           L    ++  IHRDL A N L+ E+        KI DFG+A+
Sbjct: 122 LE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 83.7 bits (207), Expect = 6e-18
 Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 28/159 (17%)

Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKR--LSKASGQG-------LEEFMNEVMVISKLQHRN 538
           +G G FG VY G     G+ +AVK+  L   S          L+    E+ ++ +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLF------DPLKKERLDWRKRFNIIEGISRG 592
           +V+ LG  ++ +   +  EY+P  S+ ALL       + L +         N +  I +G
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR---------NFVRQILKG 118

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L YLH  +R  IIHRD+K +NIL+D +   KISDFG++K
Sbjct: 119 LNYLH--NR-GIIHRDIKGANILVDNKGGIKISDFGISK 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 83.8 bits (207), Expect = 6e-18
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 28/170 (16%)

Query: 489 LGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G FG V  GRLK    +EI V   +  +G   +   +F++E  ++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK---RFNIIE------GISRGLL 594
           G   + +  M++ EYM N SLDA L           RK   +F +I+      GI+ G+ 
Sbjct: 72  GVVTKSKPVMIVTEYMENGSLDAFL-----------RKHDGQFTVIQLVGMLRGIASGMK 120

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 121 YL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 21/165 (12%)

Query: 485 LSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           L  +LG+G FG V+          +D   +AVK L +AS    ++F  E  +++ LQH++
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 539 LVRLLGCCVEGEEKMLIYEYMP----NRSL-----DALLFDPLKKE---RLDWRKRFNII 586
           +VR  G C EG   ++++EYM     NR L     DA +    +     +L   +   I 
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             I+ G++YL   + L  +HRDL   N L+ + L  KI DFGM++
Sbjct: 129 SQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 170

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 82.3 bits (204), Expect = 3e-17
 Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 23/175 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRN 538
            +++  ++G+G  G V+  +  + G+ +A+K+  L +  G    + + E+  +   QH  
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD---PLKKERLDWRKRFNIIEGISRGLL- 594
           +V+LL     G   +L+ EYMP   L  +L D   PL +           ++   R LL 
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEA---------QVKSYMRMLLK 110

Query: 595 ---YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
              Y+H      I+HRDLK +N+L+  +   KI+DFG+A++F   + +  + +V 
Sbjct: 111 GVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVA 162

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 81.6 bits (201), Expect = 4e-17
 Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 12/165 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV+
Sbjct: 7   SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ 65

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER---LDWRKRFNIIEGISRGLLYLHR 598
           L     E E   ++ EYM   SL     D LK E    L   +  ++   I+ G+ Y+ R
Sbjct: 66  LYAVVSE-EPIYIVTEYMSKGSL----LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 121 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 81.4 bits (201), Expect = 5e-17
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 26/183 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS----KASGQG--LEEFMNEVMVISKL 534
            +    +LG G F   Y  R +K G  +AVK+++     +S Q   +E    E+ ++++L
Sbjct: 1   EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRG 592
            H +++R+LG   E     L  E+M   S+  LL  +   K+  +      N  E + RG
Sbjct: 61  NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVI-----INYTEQLLRG 115

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA-----KIFGGNQDQADTGRVV 646
           L YLH +   +IIHRD+K +N+L+D      +I+DFG A     K  G  + Q   G+++
Sbjct: 116 LSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQ---GQLL 169

Query: 647 GTL 649
           GT+
Sbjct: 170 GTI 172

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 81.8 bits (202), Expect = 5e-17
 Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 29/177 (16%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR---LKDGQE---IAVKRLSK-ASGQGLEEFMNEVMVISK 533
           NN +    +GQG FG V+  R   L   +    +AVK L + AS     +F  E  ++++
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-------------------PLKK 574
             H N+V+LLG C  G+   L++EYM    L+  L                      L  
Sbjct: 65  FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124

Query: 575 ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             L   ++  I + ++ G+ YL   S  + +HRDL   N L+ E +  KI+DFG+++
Sbjct: 125 LPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 178

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 80.8 bits (199), Expect = 6e-17
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
              + QL  KLG G FG V+ G      ++AVK L K      E F+ E  ++ KL+H  
Sbjct: 4   PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDK 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           LV+L     E E   ++ EYM   SL   L D  +   L      ++   ++ G+ Y+ R
Sbjct: 63  LVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              +  IHRDL+++NIL+ + L  KI+DFG+A++   N+  A  G
Sbjct: 121 ---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 80.8 bits (199), Expect = 6e-17
 Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 10/150 (6%)

Query: 489 LGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G FG V+ G LK  G++   +A+K L    + +  ++F++E  ++ +  H N++RL 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G   + +  M+I EYM N +LD  L D          +   ++ GI+ G+ YL   S + 
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYL---SDMN 127

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIF 633
            +HRDL A NIL++  L  K+SDFG++++ 
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVL 157

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 80.5 bits (199), Expect = 6e-17
 Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 488 KLGQGGFGPVYWGRLKDGQ----EIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRL 542
           KLG G FG V  G           +AVK L        +++F+ E  ++  L H NL+RL
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW---RKRFNIIEGISRGLLYLHRD 599
            G  V     M++ E  P  SL     D L+K+ L         +    I+ G+ YL   
Sbjct: 62  YGV-VLTHPLMMVTELAPLGSL----LDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              R IHRDL A NILL  +   KI DFG+ +    N+D
Sbjct: 117 ---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 80.3 bits (198), Expect = 9e-17
 Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 6/144 (4%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V+ G+ +   ++A+K +++ +    E+F+ E  V+ KL H  LV+L G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           + +   ++ E+M N  L  L +   ++ +L      ++ + +  G+ YL R+S    IHR
Sbjct: 70  QQKPLYIVTEFMENGCL--LNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHR 124

Query: 608 DLKASNILLDEELNPKISDFGMAK 631
           DL A N L+      K+SDFGM +
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTR 148

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 80.5 bits (199), Expect = 9e-17
 Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 27/170 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
               L  +LGQG FG VY G  K          +A+K +++ AS +   EF+NE  V+ +
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKE 65

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL------------FDPLKKERLDWRK 581
               ++VRLLG    G+  +++ E M    L + L              P   ++     
Sbjct: 66  FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKF---- 121

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              +   I+ G+ YL      + +HRDL A N ++ E+L  KI DFGM +
Sbjct: 122 -IQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 81.3 bits (200), Expect = 9e-17
 Identities = 54/165 (32%), Positives = 97/165 (58%), Gaps = 14/165 (8%)

Query: 489 LGQGGFGPVYWG-RLKDGQEI----AVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + +G+ +    A+K L++ +G +   EFM+E ++++ + H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           LG C+    + L+ + MP+  L  L +    K+ +  +   N    I++G++YL      
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCL--LDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER--- 128

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           R++HRDL A N+L+    + KI+DFG+A++  G++ +  AD G++
Sbjct: 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 173

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN--EVMVISKLQHRNL 539
           +Q   K+G+G +G VY  R    G+ +A+K++               E+ ++ +L H N+
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLH 597
           ++LL       +  L++E+M     D  L+  +K  +  L      + +  + +GL + H
Sbjct: 61  IKLLDVFRHKGDLYLVFEFM-----DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH 115

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                 I+HRDLK  N+L++ E   K++DFG+A+ FG    
Sbjct: 116 SH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 80.0 bits (197), Expect = 1e-16
 Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 6/144 (4%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G FG V+ G LKD   +AVK   +   Q L+ +F++E  ++ +  H N+V+L+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           + +   ++ E +P    D L F   KK+ L  ++        + G+ YL   +    IHR
Sbjct: 63  QRQPIYIVMELVPGG--DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHR 117

Query: 608 DLKASNILLDEELNPKISDFGMAK 631
           DL A N L+ E    KISDFGM++
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 79.9 bits (197), Expect = 2e-16
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 10/148 (6%)

Query: 489 LGQGGFGPVYWGRLK----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G FG V  GRLK        +A+K L    + +   +F++E  ++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G   +    M+I E+M N +LD+ L       +    +   ++ GI+ G+ YL   S + 
Sbjct: 72  GVVTKSRPVMIITEFMENGALDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---SEMN 126

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAK 631
            +HRDL A NIL++  L  K+SDFG+++
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSR 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 6/144 (4%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+ KL H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     ++ EYM N  L   L +  K  R    +   + + +  G+ YL      + IHR
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHR 124

Query: 608 DLKASNILLDEELNPKISDFGMAK 631
           DL A N L+D++   K+SDFG+++
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSR 148

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 16/156 (10%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMN--EVMVISKLQ-HRN 538
           +++  +LG G FG VY  R K+  E+ A+K++ K      EE MN  EV  + KL  H N
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER---LDWRKRFNIIEGISRGLLY 595
           +V+L     E +E   ++EYM     +  L+  +K  +          +II  I +GL +
Sbjct: 60  IVKLKEVFRENDELYFVFEYM-----EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAH 114

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +H+       HRDLK  N+L+      KI+DFG+A+
Sbjct: 115 IHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAR 147

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 12/154 (7%)

Query: 487 SKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN-----EVMVISKLQHRNLV 540
            KLG+G +  VY  R  + G+ +A+K++     +  ++ +N     E+ ++ +L+H N++
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            LL          L++E+M    L+ ++ D  K   L      + +    RGL YLH + 
Sbjct: 66  GLLDVFGHKSNINLVFEFMET-DLEKVIKD--KSIVLTPADIKSYMLMTLRGLEYLHSNW 122

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
              I+HRDLK +N+L+  +   K++DFG+A+ FG
Sbjct: 123 ---ILHRDLKPNNLLIASDGVLKLADFGLARSFG 153

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 16/170 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLE-EFMNEVMVISKLQHRN 538
                 S+LG+G  G V   RLK+   I A+K ++      L+ + + E+ +    +   
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60

Query: 539 LVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLY 595
           +V+  G  ++     +    EY    SLD++     K+  R+  +    I E + +GL Y
Sbjct: 61  IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQ 637
           LH  SR +IIHRD+K SNILL  +   K+ DFG        +A  F G  
Sbjct: 121 LH--SR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTS 167

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 78.6 bits (193), Expect = 3e-16
 Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + +L  KLGQG FG V+ G      ++A+K L K      E F+ E  ++ KL+H  LV 
Sbjct: 7   SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVP 65

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK---ERLDWRKRFNIIEGISRGLLYLHR 598
           L     E E   ++ E+M   SL     D LK+   + L   +  ++   I+ G+ Y+ R
Sbjct: 66  LYAVVSE-EPIYIVTEFMGKGSL----LDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              +  IHRDL+A+NIL+ + L  KI+DFG+A++   N+  A  G
Sbjct: 121 ---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 4e-16
 Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 10/154 (6%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            + +++  +LG G FG VY  + K+ G   A K +   S + LE+FM E+ ++S+ +H N
Sbjct: 4   NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN 63

Query: 539 LVRLLGCCV-EGEEKMLIYEYMPNRSLDALLFDPLKKER-LDWRKRFNIIEGISRGLLYL 596
           +V L      E +  +LI E+    +LD+++   L+ ER L   +   +   +   L +L
Sbjct: 64  IVGLYEAYFYENKLWILI-EFCDGGALDSIM---LELERGLTEPQIRYVCRQMLEALNFL 119

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           H     ++IHRDLKA NILL  + + K++DFG++
Sbjct: 120 HSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 13/158 (8%)

Query: 484 QLSSKLGQGGFGPVYWG-RLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           Q  +K+G G FG VY    L  G+ +AVK  R+     + ++E  +E+ V+  L+H NLV
Sbjct: 3   QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLV 62

Query: 541 RLLGCCVEGEEKMLIY-EYMPNRSLDALL-FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +  G  V   EK+ I+ EY    +L+ LL    +  E +       ++EG++    YLH 
Sbjct: 63  KYYGVEVH-REKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLA----YLHS 117

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
                I+HRD+K +NI LD     K+ DFG A     N
Sbjct: 118 H---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 78.1 bits (192), Expect = 4e-16
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + +L  KLG G FG V+        ++AVK + K     +E F+ E  V+  LQH  LV+
Sbjct: 7   SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK 65

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEGISRGLLYLHR 598
           L    V  E   +I E+M   SL     D LK +   +    K  +    I+ G+ ++ +
Sbjct: 66  L-HAVVTKEPIYIITEFMAKGSL----LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +    IHRDL+A+NIL+   L  KI+DFG+A++   N+  A  G
Sbjct: 121 RN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 79.3 bits (195), Expect = 5e-16
 Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 14/165 (8%)

Query: 489 LGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ + + ++ RL
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           LG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ YL      
Sbjct: 75  LGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER--- 128

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD--QADTGRV 645
           R++HRDL A N+L+    + KI+DFG+AK+ G ++    A+ G+V
Sbjct: 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKV 173

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 78.9 bits (194), Expect = 5e-16
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 10/149 (6%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG VY+ R +++ + +A+K++S   K S +  ++ + EV  + KL+H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           GC +      L+ EY    + D L    + K+ L   +   +  G  +GL YLH  +   
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKI 632
           +IHRD+KA NILL E    K+ DFG A I
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASI 164

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 77.8 bits (192), Expect = 7e-16
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKR--LSKASGQGLEEFMNEVMVISKLQHR 537
           ++++L   +G G    VY        E +A+KR  L K     ++E   EV  +S+  H 
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK-CQTSVDELRKEVQAMSQCNHP 59

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+     V G+E  L+  Y+   SL  ++     +  LD      +++ + +GL YLH
Sbjct: 60  NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGR-VVGT 648
            + +   IHRD+KA NILL E+ + KI+DFG+ A +  G        +  VGT
Sbjct: 120 SNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGT 169

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 78.1 bits (192), Expect = 8e-16
 Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 28/176 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE---------------IAVKRL-SKASGQGLEEF 524
              +L  KLG+G FG V+    +   E               +AVK L +  +     +F
Sbjct: 5   QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDF 64

Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E+ ++S+L++ N++RLLG CV  +   +I EYM N  L+  L    ++E        N
Sbjct: 65  LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLS---QREIESTFTHAN 121

Query: 585 IIEGISRG-LLYLHRD--------SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            I  +S   LLY+           + L  +HRDL   N L+      KI+DFGM++
Sbjct: 122 NIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSR 177

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 77.3 bits (190), Expect = 9e-16
 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)

Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           A      +L   +G+G FG V  G  + G ++AVK + + A+ Q    F+ E  V+++L+
Sbjct: 2   ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 57

Query: 536 HRNLVRLLGCCVEGEEKMLIY-EYMPNRSLDALLFDPLK---KERLDWRKRFNIIEGISR 591
           H NLV+LLG  VE +  + I  EYM   SL     D L+   +  L           +  
Sbjct: 58  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL----VDYLRSRGRSVLGGDCLLKFSLDVCE 113

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            + YL  ++    +HRDL A N+L+ E+   K+SDFG+ K     QD  
Sbjct: 114 AMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 15/170 (8%)

Query: 482 NFQLSSKLGQGGFGPVYW-GRLKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRN 538
           +F++  KLG+G +G VY   RL D Q  A+K   L   S +  E+ +NE+ +++ + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-----DWRKRFNIIEGISRGL 593
           ++      ++G +  ++ EY P   L   +    KK +L      WR    I   + RGL
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWR----IFIQLLRGL 116

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
             LH     +I+HRDLK++NILL      KI D G++K+   N  +   G
Sbjct: 117 QALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIG 163

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 77.2 bits (190), Expect = 2e-15
 Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRN 538
           F    ++G G FG VY+ R ++  + +A+K++S   K S +  ++ + EV  + +L+H N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            +   GC +      L+ EY    + D L  +  KK  L   +   I  G  +GL YLH 
Sbjct: 77  TIEYKGCYLREHTAWLVMEYCLGSASDIL--EVHKKP-LQEVEIAAICHGALQGLAYLHS 133

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
             R   IHRD+KA NILL E    K++DFG A +
Sbjct: 134 HER---IHRDIKAGNILLTEPGTVKLADFGSASL 164

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 29/168 (17%)

Query: 488 KLGQGGFGPVYWGR--------LKDGQE---------IAVKRLSK-ASGQGLEEFMNEVM 529
           KLG+G FG V+            K   E         +AVK L   AS    E+F+ EV 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL--------FDPLKKERLDWRK 581
           ++S+L   N+ RLLG C       +I EYM N  L+  L              + L +  
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST 131

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
              +   I+ G+ YL     L  +HRDL   N L+ +    KI+DFGM
Sbjct: 132 LLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGM 176

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 77.4 bits (191), Expect = 2e-15
 Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 14/157 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNEVMVISKLQH 536
            +FQ+ +++GQGG+G V+  + KD  EI A+KR+ K+    L E    + E  +++  + 
Sbjct: 1   KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP--LKKERLDWRKRFNIIEGISRGLL 594
             LV+LL    + E   L  EY+P      LL +   L ++      RF + E     + 
Sbjct: 61  EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDH----ARFYMAEMFE-AVD 115

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            LH    L  IHRDLK  N L+D   + K++DFG++K
Sbjct: 116 ALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSK 149

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 22/166 (13%)

Query: 485 LSSKLGQGGFGPVYWGR------LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           L  +LG+G FG V+          KD   +AVK L   +    ++F  E  +++ LQH +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLK-KERLDWRKRFNI 585
           +V+  G C +G+  ++++EYM +  L         DA++     P + K  L   +  +I
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              I+ G++YL   +    +HRDL   N L+   L  KI DFGM++
Sbjct: 129 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 171

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 11/164 (6%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE---FMNEVMVISKLQHRNLVRLLGC 545
           +G+G FG V+  R K  Q++ + +         +E     NE  V+  L H N++     
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
            +E +  M++ EY P  +L     + ++K          I+    + LL LH      I+
Sbjct: 68  FLEDKALMIVMEYAPGGTL----AEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123

Query: 606 HRDLKASNILLDEELNP-KISDFGMAKIFGGNQDQADTGRVVGT 648
           HRDLK  NILLD+     KI DFG++KI   ++ +A T  VVGT
Sbjct: 124 HRDLKTQNILLDKHKMVVKIGDFGISKIL-SSKSKAYT--VVGT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 25/175 (14%)

Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLS-KASGQGLEEFMNE 527
           E+  +T  F    +LG+  FG VY G L      +  Q +A+K L  KA G   EEF +E
Sbjct: 1   EINLSTVRFM--EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DPLKK 574
            M+ S+LQH N+V LLG   + +   +I+ Y  +  L   L              D   K
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK 118

Query: 575 ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
             L+     +I+  I+ G+ +L   S   ++H+DL   N+L+ ++LN KISD G+
Sbjct: 119 STLEPADFVHIVTQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGL 170

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 76.1 bits (188), Expect = 3e-15
 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 12/175 (6%)

Query: 483 FQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQHRNL 539
           +++   +G+G FG V    R  DG+ +  K +     + +  ++ ++EV ++ +L+H N+
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDAL--LFDPLKKER--LDWRKRFNIIEGISRGLLY 595
           VR     ++      +Y  M       L  L    KKER  ++    + I+  +   L  
Sbjct: 62  VRYYDRIID-RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYE 120

Query: 596 LHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            H   D    ++HRDLK +NI LD   N K+ DFG+AKI G +   A T   VGT
Sbjct: 121 CHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT--YVGT 173

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 76.7 bits (188), Expect = 3e-15
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG VY+ R ++  + +A+K++S   K S +  ++ + EV  + +++H N +   
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           GC +      L+ EY    + D L    + K+ L   +   I  G  +GL YLH  +   
Sbjct: 92  GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAITHGALQGLAYLHSHN--- 145

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKI 632
           +IHRD+KA NILL E    K++DFG A I
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFGSASI 174

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.8 bits (186), Expect = 3e-15
 Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 24/163 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRL-----SKASGQGLEEFMNEVMVISKLQ 535
           N++L   LG+G FG VY     D G+E+AVK++     S+ + + +     E+ ++  L+
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62

Query: 536 HRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-----KERLDWRKRFNIIEG 588
           H  +V+  GC  + EEK L    EYMP  S+     D LK      E +  R    I++G
Sbjct: 63  HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIK----DQLKAYGALTENVTRRYTRQILQG 118

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +S    YLH +    I+HRD+K +NIL D   N K+ DFG +K
Sbjct: 119 VS----YLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 76.1 bits (187), Expect = 3e-15
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 13/151 (8%)

Query: 489 LGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V   R        G+++AVK L   SG   + +   E+ ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            G C E       LI E++P+ SL   L  P  K +++ +++      I +G+ YL   S
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PRNKNKINLKQQLKYAVQICKGMDYL--GS 127

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           R + +HRDL A N+L++ E   KI DFG+ K
Sbjct: 128 R-QYVHRDLAARNVLVESEHQVKIGDFGLTK 157

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 76.0 bits (187), Expect = 3e-15
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 21/183 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDG-------QEIAVKRLS-----KASGQGLEEFMNEVM 529
            + +   LG G FG VY  R K+        +EI V   +     +   + + + ++EV 
Sbjct: 1   EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60

Query: 530 VISK-LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK--KERLDWRKRFNII 586
           +I + L+H N+VR     +E +   ++ + +    L    F+ LK  K+R    + +NI 
Sbjct: 61  IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPL-GEHFNSLKEKKQRFTEERIWNIF 119

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
             +   L YLH++ R  I+HRDL  +NI+L E+    I+DFG+AK     Q ++    VV
Sbjct: 120 VQMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAK---QKQPESKLTSVV 174

Query: 647 GTL 649
           GT+
Sbjct: 175 GTI 177

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 75.8 bits (186), Expect = 4e-15
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 20/176 (11%)

Query: 485 LSSKLGQGGFGPVYWGRLKDGQEI---AVKRLSKA--SGQGLEEFMNEVMVISKLQHRNL 539
           L   LG+G FG V  G+L     I   AVK +  A  +   +E+F++E + + +  H N+
Sbjct: 3   LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV 62

Query: 540 VRLLGCCVEGEEK------MLIYEYMPNRSLDA-LLFDPL--KKERLDWRKRFNIIEGIS 590
           +RL+G C++  E       ++I  +M +  L + LL+  L    + L  +     +  I+
Sbjct: 63  MRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIA 122

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGGNQDQADTGRV 645
            G+ YL   S    IHRDL A N +L+E +N  ++DFG++ KI+ G  D    GR+
Sbjct: 123 SGMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG--DYYRQGRI 173

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 75.5 bits (186), Expect = 5e-15
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 21/157 (13%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE------FMNEVMVISKLQHRNLV 540
           K+G+G +G VY GR  K GQ +A+K++   S    EE       + E+ ++ +LQH N+V
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLES----EEEGVPSTAIREISLLKELQHPNIV 62

Query: 541 RLLGCCVEGEEKMLIYEYMP---NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
            L    ++     LI+E++     + LD+L         L     + I++GI    L+ H
Sbjct: 63  CLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGI----LFCH 118

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
                R++HRDLK  N+L+D +   K++DFG+A+ FG
Sbjct: 119 SR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 75.1 bits (184), Expect = 7e-15
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRL-----SKASGQGLEEFMNEVMVISKLQ 535
           N++L   LGQG FG VY     D G+E+AVK++     S  + + +     E+ ++  L 
Sbjct: 3   NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62

Query: 536 HRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLKK-----ERLDWRKRFNIIEG 588
           H  +V+  GC  +  E+ L    E+MP  S+     D LK      E +  +    I+EG
Sbjct: 63  HERIVQYYGCLRDPMERTLSIFMEHMPGGSIK----DQLKSYGALTENVTRKYTRQILEG 118

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +S    YLH +    I+HRD+K +NIL D   N K+ DFG +K
Sbjct: 119 VS----YLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 74.6 bits (183), Expect = 8e-15
 Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 16/151 (10%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLS------KASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G +G VY G    GQ IAVK++        A+ +  E+   EV ++  L+H N+V+ 
Sbjct: 8   LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           LG C++     +  E++P  S+ ++L  F PL  E +  +    I++G++    YLH + 
Sbjct: 68  LGTCLDDNTISIFMEFVPGGSISSILNRFGPL-PEPVFCKYTKQILDGVA----YLHNNC 122

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              ++HRD+K +N++L      K+ DFG A+
Sbjct: 123 ---VVHRDIKGNNVMLMPNGIIKLIDFGCAR 150

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (184), Expect = 8e-15
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 20/156 (12%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           ++L  ++G G +G VY  R +  G+ +A+K +    G   E    E+ ++ + +H N+V 
Sbjct: 5   YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA 64

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDAL---LFDPLKKERLDWRKRFNIIEGISR----GLL 594
             G  +  ++  ++ EY    SL  +      PL + +         I  + R    GL 
Sbjct: 65  YFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQ---------IAYVCRETLKGLA 115

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           YLH       IHRD+K +NILL E+ + K++DFG++
Sbjct: 116 YLHE---TGKIHRDIKGANILLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 74.2 bits (182), Expect = 9e-15
 Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 25/168 (14%)

Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           L   +G+G FG V  G    GQ++AVK +    + Q    F+ E  V++KL H+NLVRLL
Sbjct: 10  LGEIIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTAQA---FLEETAVMTKLHHKNLVRLL 65

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE------GISRGLLYLH 597
           G  +      ++ E M   +L   L       R   R   ++I+       ++ G+ YL 
Sbjct: 66  GVILH-NGLYIVMELMSKGNLVNFL-------RTRGRALVSVIQLLQFSLDVAEGMEYLE 117

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
                +++HRDL A NIL+ E+   K+SDFG+A++        D  ++
Sbjct: 118 SK---KLVHRDLAARNILVSEDGVAKVSDFGLARV---GSMGVDNSKL 159

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 74.8 bits (184), Expect = 9e-15
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 16/163 (9%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N Q  + LG+G FG V+  + K  +E      + VK L K   + L+ EF  E+ +  KL
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNIIEG 588
            H+N+VRLLG C E E   +I EY     L   L       + LK   L  +++  +   
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           I+ G+ +L   S  R +HRDL A N L+  +   K+S   ++K
Sbjct: 126 IALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSK 165

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 14/158 (8%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGL-EEFMNEVMVISKLQHRNL 539
           +Q   K+G+G +G VY  R    G+ +A+K++  +   +G+    + E+ ++ +L H N+
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI 60

Query: 540 VRLLGCCVEGEEKMLIYEYMP---NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           VRLL       +  L++E++     + +D+     L    +   K +  +  + +G+ Y 
Sbjct: 61  VRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLI---KSY--LYQLLQGIAYC 115

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           H  S  R++HRDLK  N+L+D E   K++DFG+A+ FG
Sbjct: 116 H--SH-RVLHRDLKPQNLLIDREGALKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 23/170 (13%)

Query: 489 LGQGGFG-PVYWGRLKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRNLVRLLGC 545
           LG+G FG    + R +D   +  K   L++ S +   + +NE++++S LQH N++     
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNH 67

Query: 546 CVEGEEKMLIYEYMPNRSL-------DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            ++    ++  EY    +L          LF+   +E + W      +  I   + Y+H+
Sbjct: 68  FMDDNTLLIEMEYANGGTLYDKIVRQKGQLFE---EEMVLW-----YLFQIVSAVSYIHK 119

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
                I+HRD+K  NI L +    K+ DFG++KI G     A+T  VVGT
Sbjct: 120 AG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 75.1 bits (185), Expect = 1e-14
 Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 23/184 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF----MNEVMVISKLQ 535
           + ++  +K+GQG FG V+  R K  ++I A+K++        E F    + E+ ++  L+
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKV--LMENEKEGFPITALREIKILQLLK 69

Query: 536 HRNLVRLLGCC-----VEGEEKMLIYEYMP--NRSLDALLFDPLKKERLDWRKRFNIIEG 588
           H N+V L+  C          K   Y         L  LL +   K  L   K+  +++ 
Sbjct: 70  HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKK--VMKM 127

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD---TGRV 645
           +  GL Y+HR+   +I+HRD+KA+NIL+ ++   K++DFG+A+ F  +++      T RV
Sbjct: 128 LLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRV 184

Query: 646 VGTL 649
           V TL
Sbjct: 185 V-TL 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 23/173 (13%)

Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLS---------KASGQGLEEFMN-EVMVISKLQHR 537
           +G+G +G VY    +  G+ +AVK++           +  + + + +  E+  +  L H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 538 NLVRLLGCCVEGEEKMLIY-EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           N+V+ LG     EE + I+ EY+P  S+ + L    + E     + F   E +  GL YL
Sbjct: 69  NIVQYLGF-ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEE-QLVRFFT--EQVLEGLAYL 124

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK----IFGGNQDQADTGRV 645
           H      I+HRDLKA N+L+D +   KISDFG++K    I+  +Q+ +  G V
Sbjct: 125 HSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSV 174

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 73.7 bits (182), Expect = 2e-14
 Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 28/169 (16%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA----SGQGLEEFMNEVMVISKLQ 535
           ++F+    LG G FG V   R K   +  A+K LSKA      Q +E  +NE  ++  ++
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQSIR 59

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR---- 591
           H  LV L G   +     L+ EY+P   L    F  L+K       RF   E ++R    
Sbjct: 60  HPFLVNLYGSFQDDSNLYLVMEYVPGGEL----FSHLRKSG-----RFP--EPVARFYAA 108

Query: 592 ----GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
                L YLH    L I++RDLK  N+LLD +   KI+DFG AK   G 
Sbjct: 109 QVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 15/170 (8%)

Query: 483 FQLSSKLGQGGFGPVYWG---RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           F    ++G+G FG VY G   R K+   I +  L +A  + +E+   E+ V+S+     +
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYI 64

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            R  G  ++G +  +I EY+   S LD L   PL++  +       I+  I +GL YLH 
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHS 119

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   R IHRD+KA+N+LL E+ + K++DFG+A      Q + +T   VGT
Sbjct: 120 E---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 164

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 72.7 bits (178), Expect = 3e-14
 Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 7/146 (4%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           ++G+G FG V+ GRL+ D   +AVK   +     L+ +F+ E  ++ +  H N+VRL+G 
Sbjct: 2   RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           C + +   ++ E +  +  D L F   +  RL  ++   ++E  + G+ YL        I
Sbjct: 62  CTQKQPIYIVMELV--QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CI 116

Query: 606 HRDLKASNILLDEELNPKISDFGMAK 631
           HRDL A N L+ E+   KISDFGM++
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSR 142

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 29/173 (16%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRL-KDG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+ KDG   + A+KR+ + AS     +F  E+ V+ KL  
Sbjct: 7   NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 66

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
           H N++ LLG C       L  EY P+ +L     D L+K R                 L 
Sbjct: 67  HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 122

Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++  +    ++RG+ YL   S+ + IHRDL A NIL+ E    KI+DFG+++
Sbjct: 123 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 172

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 14/153 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +++  +LG G FG VY  + K+ G   A K +   S + LE++M E+ +++   H  +V+
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVK 73

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLH 597
           LLG      +  ++ E+ P  ++DA++ +      LD       I+ I R +L    YLH
Sbjct: 74  LLGAFYWDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVICRQMLEALQYLH 127

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
               ++IIHRDLKA N+LL  + + K++DFG++
Sbjct: 128 S---MKIIHRDLKAGNVLLTLDGDIKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 12/163 (7%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V   R K  G+++AVK +     Q  E   NEV+++   QH+N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + GEE  ++ E++   +L     D + + RL+  +   + E + + L YLH      +IH
Sbjct: 88  LVGEELWVLMEFLQGGALT----DIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIH 140

Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ +ILL  +   K+SDFG  A+I   ++D      +VGT
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKSLVGT 180

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 73.4 bits (180), Expect = 4e-14
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 37/178 (20%)

Query: 488 KLGQGGFGPVYWGRLKDGQE-----------------IAVKRL-SKASGQGLEEFMNEVM 529
           KLG+G FG V+   + + Q+                 +AVK L   A+     +F+ EV 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER------------- 576
           ++S+L+  N++RLLG CV+ +   +I EYM N  L+  L      ++             
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHC 131

Query: 577 ---LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              + +    ++   I+ G+ YL   S L  +HRDL   N L+ E L  KI+DFGM++
Sbjct: 132 LPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSR 186

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 72.9 bits (179), Expect = 4e-14
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 24/164 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN 538
           NFQ   K+G+G +G VY  R    G+ +A+K  RL   +       + E+ ++ +L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 539 LVRLLGCCVEGEEKM-LIYEYMPN---RSLDAL----LFDPLKKERLDWRKRFNIIEGIS 590
           +V+LL   +  E K+ L++E++     + +DA     +  PL K  L     F +++G++
Sbjct: 61  IVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYL-----FQLLQGLA 114

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 115 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 73.5 bits (180), Expect = 4e-14
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 488 KLGQGGFGPVYWGRLKDGQEI-AVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG VY+       E+ AVK++S   K + +  ++ + EV  + +L+H N +   
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           GC ++     L+ EY    + D L    + K+ L   +   I  G  +GL YLH  +   
Sbjct: 88  GCYLKEHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAITHGALQGLAYLHSHN--- 141

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKI 632
           +IHRD+KA NILL E    K++DFG A  
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASK 170

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 72.7 bits (179), Expect = 5e-14
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 23/176 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN----EVMVISKLQ 535
           N +++   +G+G +G V   R K  G+ +A+K+  K S +  E+       EV V+ +L+
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKF-KES-EDDEDVKKTALREVKVLRQLR 58

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGIS 590
           H N+V L           L++EY+    L+ L        P       W+    +++ I+
Sbjct: 59  HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ----LLQAIA 114

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
               Y H      IIHRD+K  NIL+ E    K+ DFG A+          T  V 
Sbjct: 115 ----YCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA 163

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 66.8 bits (163), Expect = 6e-14
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 337 EDGFSKLNKMKVPDFTE-WTSPATEDECREQCLK-NCSCIAYAFD-GGIGCMVWRSINLI 393
           +D F +L   K+P F+    S A+ +EC  +CL  NCSC ++ ++ G  GC++W   +L 
Sbjct: 3   DDCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLG 62

Query: 394 DIQRLPFGGTDLYIRV 409
           D +  P GG DLY ++
Sbjct: 63  DARLFPSGGVDLYEKI 78

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 72.7 bits (179), Expect = 7e-14
 Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 32/172 (18%)

Query: 483 FQLSSKLGQGGFGPVYWGRLK---DGQEIAVKRL--SKASGQGLEE-FMNEVMVISKLQH 536
           +++   +G+G +G VY  + K   DG+E A+K+    K    G+ +    E+ ++ +L+H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 537 RNLVRLLGCCVEGEEKM--LIYEYMP---------NRSLDALLFDPLKKERLDWRKRFNI 585
            N+V L+   +E  +K   L+++Y           +R    +   P   + L W+     
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ----- 116

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIF 633
              I  G+ YLH +    ++HRDLK +NIL+  E       KI D G+A++F
Sbjct: 117 ---ILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 11/149 (7%)

Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DGQ+I  AVK L++ +  + +E+F+ E +++    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   +        +     F +   +++G+ YL   +  
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGL--QVAKGMEYL---ASK 117

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE    K++DFG+A+
Sbjct: 118 KFVHRDLAARNCMLDESFTVKVADFGLAR 146

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 72.2 bits (177), Expect = 7e-14
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)

Query: 488 KLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+K+++       E  +NE++V+ + +H N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLHRDSRL 602
           + G+E  ++ EY+   SL  ++ +    E          I  + R  L    +LH +   
Sbjct: 86  LVGDELWVVMEYLAGGSLTDVVTETCMDE--------GQIAAVCRECLQALEFLHSN--- 134

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           ++IHRD+K+ NILL  + + K++DFG        Q +  T  +VGT
Sbjct: 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 71.1 bits (174), Expect = 1e-13
 Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 11/164 (6%)

Query: 488 KLGQGGFGPVYWG--RLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           +LG G FG V  G  +++  Q ++A+K L   + + + +E M E  ++ +L +  +VR++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C E E  ML+ E      L+  L    KK+ +       ++  +S G+ YL   +   
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGKN--- 115

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            +HRDL A N+LL  +   KISDFG++K  G + D     R  G
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGAD-DSYYKARSAG 158

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 71.3 bits (174), Expect = 1e-13
 Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRL-----SKASGQGLEEFMNEVMVISKLQ 535
           N++    LGQG FG VY     D G+E+A K++     S  + + +     E+ ++  LQ
Sbjct: 3   NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62

Query: 536 HRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-----KERLDWRKRFNIIEG 588
           H  +V+  GC  +  EK L    EYMP  S+     D LK      E +  +    I+EG
Sbjct: 63  HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVK----DQLKAYGALTESVTRKYTRQILEG 118

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +S    YLH +    I+HRD+K +NIL D   N K+ DFG +K
Sbjct: 119 MS----YLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 25/159 (15%)

Query: 488 KLGQGGFGPVYWGRLKDGQE-IAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           K+G+G +G VY  R +   E IA+K  RL +         + E+ ++ ++QH N+VRL  
Sbjct: 9   KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEG----ISRGLLYL 596
             V  E+++ L++EY+    LD      LKK      D+ K   +I+     I RG+ Y 
Sbjct: 69  V-VHSEKRLYLVFEYL---DLD------LKKHMDSSPDFAKNPRLIKTYLYQILRGIAYC 118

Query: 597 HRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFG 634
           H  S  R++HRDLK  N+L+D   N  K++DFG+A+ FG
Sbjct: 119 H--SH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154

Length = 294

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 70.7 bits (173), Expect = 2e-13
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIA---VKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG V  G    G   A   VK L + A+      F+ EV    +L H N+++ L
Sbjct: 2   EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCL 61

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF--NIIEGISRGLLYLHRDSR 601
           G C+E    +L+ E+ P   L   L           +K     +   ++ GLL+LH   +
Sbjct: 62  GQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---Q 118

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMA 630
              IH DL   N  L  +L+ KI D+G+A
Sbjct: 119 ADFIHSDLALRNCQLTADLSVKIGDYGLA 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 29/170 (17%)

Query: 488 KLGQGGFGPVYWGRLKDGQE-----------------IAVKRL-SKASGQGLEEFMNEVM 529
           KLG+G FG V+    +  ++                 +AVK L   A+     +F+ E+ 
Sbjct: 12  KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF------DPLKKER--LDWRK 581
           ++S+L+  N++RLL  C+  +   +I EYM N  L+  L          K +   + +  
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              +   I+ G+ YL   S L  +HRDL   N L+ +    KI+DFGM++
Sbjct: 132 LIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSR 178

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 31/178 (17%)

Query: 482 NFQLSSKLGQGGFGPVYWG---RLKDG---QEIAVKRLSKASGQG-LEEFMNEVMVISKL 534
           N  L   LG+G FG V      RLK       +AVK L + +    L + ++E  ++ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK--------------------- 573
            H ++++L G C +    +LI EY    SL + L +  K                     
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +  L      +    ISRG+ YL   + ++++HRDL A N+L+ E    KISDFG+++
Sbjct: 121 ERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)

Query: 487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLG 544
            +LG G  G V     +  G+ +AVK +     + ++ + + E+ ++ K     +V   G
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYG 66

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                 +  +  EYM   SLD +L     + R+  R    I   + +GL YLH     +I
Sbjct: 67  AFYNNGDISICMEYMDGGSLDKIL--KEVQGRIPERILGKIAVAVLKGLTYLHEK--HKI 122

Query: 605 IHRDLKASNILLDEELNPKISDFG--------MAKIFGG 635
           IHRD+K SNIL++     K+ DFG        +AK F G
Sbjct: 123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVG 161

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 17/167 (10%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWG----RLKDGQE--IAVKRLSK-ASGQGLEEFMNEVMVI 531
           A     +S +LGQG FG VY G     +KD  E  +A+K +++ AS +   EF+NE  V+
Sbjct: 4   AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63

Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------WRKRFN 584
            +    ++VRLLG   +G+  ++I E M    L + L     +   +        +K   
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 124 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V     K  G+++AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L +LH      +IH
Sbjct: 86  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIH 138

Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 139 RDIKSDSILLTSDGRVKLSDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)

Query: 483 FQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQ 535
           F L   LG+G FG V   +LK      Q++AVK L KA   S   +EEF+ E   + +  
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEFD 59

Query: 536 HRNLVRLLGCCVEGEEK------MLIYEYMPNRSLDA-LLFDPLKKE--RLDWRKRFNII 586
           H N+++L+G  +    K      M+I  +M +  L   LL   + +E   L  +     +
Sbjct: 60  HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM 119

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGGN 636
             I+ G+ YL   S    IHRDL A N +L+E +   ++DFG++ KI+ G+
Sbjct: 120 IDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGD 167

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 70.5 bits (172), Expect = 3e-13
 Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 10/162 (6%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G V+    +  GQE+A+K+++       E  +NE++V+ +L++ N+V  L   
Sbjct: 26  KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF 85

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 86  LVGDELFVVMEYLAGGSLT----DVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIH 138

Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           RD+K+ N+LL  + + K++DFG        Q +  T  +VGT
Sbjct: 139 RDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 24/164 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGL-EEFMNEVMVISKLQHRNL 539
           NF+   KLG+G +  VY GR +   EI A+K +   + +G     + E+ ++ +L+H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 540 VRLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKK------ER--LDWRKRFNIIEGIS 590
           VRL    +  E K ML++EYM            LKK       R  LD     +    + 
Sbjct: 61  VRLHDV-IHTENKLMLVFEYMDK---------DLKKYMDTHGVRGALDPNTVKSFTYQLL 110

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +G+ + H +   R++HRDLK  N+L+++    K++DFG+A+ FG
Sbjct: 111 KGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 69.6 bits (170), Expect = 4e-13
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 25/157 (15%)

Query: 488 KLGQGGFGPVYWGRLKDG---QEIAVKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG V  G +  G    ++ VK L   AS Q   +F+ E      LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 544 GCCVEGEEKMLIYEYMP----------NRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           G C E    +L+ E+ P           R  + +  DP   +R+           I+ GL
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACE--------IALGL 113

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L+LH+++    IH DL   N LL  +L  KI D+G++
Sbjct: 114 LHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLS 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 14/160 (8%)

Query: 481 NNFQLSSKLGQGGFGPVY----WGRLKDGQ--EIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN      LG G FG V     +G  K     ++AVK L   A     E  M+E+ ++S 
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-LDWRKRFNIIEGISR 591
           L  H N+V LLG C  G   ++I EY      D L F   K+E  L      +    +++
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYC--CYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           G+ +L   +    IHRDL A N+LL      KI DFG+A+
Sbjct: 153 GMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 69.6 bits (170), Expect = 5e-13
 Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 16/153 (10%)

Query: 489 LGQGGFGPVYWG-RLKDGQEI----AVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG V+ G  + +G  I    A+K +   SG Q  +E  + ++ +  L H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
           LG C  G    L+ +  P  SL     D +++ R  LD ++  N    I++G+ YL    
Sbjct: 75  LGIC-PGASLQLVTQLSPLGSL----LDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH- 128

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
             R++HR+L A NILL  +   +I+DFG+A + 
Sbjct: 129 --RMVHRNLAARNILLKSDSIVQIADFGVADLL 159

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 69.0 bits (169), Expect = 7e-13
 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDG-----QEIAVKRLSK-ASGQGLEEFMNEVMVISKLQH 536
             LS  L +G FG +++G L D      +E+ VK +   AS   +   + E  ++  L H
Sbjct: 8   VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH 67

Query: 537 RNLVRLLGCCVEGEEK-MLIYEYMPNRSLDALLFDP-----LKKERLDWRKRFNIIEGIS 590
           +N++ +L  C+E  E   ++Y YM   +L   L           + L  ++  ++   I+
Sbjct: 68  QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIA 127

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISD 626
            G+ YLH+     +IH+D+ A N ++DEEL  KI+D
Sbjct: 128 CGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD 160

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 68.8 bits (169), Expect = 7e-13
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 19/167 (11%)

Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
           L   T  F+L   +G+G +G VY  R  K GQ +A+K +        EE   E  ++ K 
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIM-DIIEDEEEEIKEEYNILRKY 59

Query: 535 -QHRNLVRLLGC------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN--- 584
             H N+    G           ++  L+ E     S+  L+    KK +   R +     
Sbjct: 60  SNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGK---RLKEEWIA 116

Query: 585 -IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
            I+    RGL YLH +   ++IHRD+K  NILL +    K+ DFG++
Sbjct: 117 YILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVS 160

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 23/164 (14%)

Query: 488 KLGQGGFGPVYWGRL-----KDGQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVR 541
           +LG+  FG +Y G L        Q +A+K L    + Q   EF  E  ++++L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLF--------------DPLKKERLDWRKRFNIIE 587
           LLG   + +   +++EY+    L   L               D   K  LD     +I  
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            I+ G+ YL   S    +H+DL A NIL+ E+L+ KISD G+++
Sbjct: 132 QIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 30/178 (16%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQG---LEEFMNEVMVISKLQHRNLVRLLG 544
           + +G +G V+  + K  G   A+K + KA       +++ + E  ++S+ Q   +V+L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY- 59

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
              +G++ + L+ EY+P   L +LL      D       D  +    I  I   L YLH 
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDE------DVAR--IYIAEIVLALEYLHS 111

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-------ADTGRVVGTL 649
                IIHRDLK  NIL+D   + K++DFG++K  G  + Q        +  R+VGT 
Sbjct: 112 ---NGIIHRDLKPDNILIDSNGHLKLTDFGLSK-VGLVRRQINLNDDEKEDKRIVGTP 165

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 18/167 (10%)

Query: 489 LGQGGFGPVYWG-RLKDGQEI----AVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + DG+ +    A+K L +  S +  +E ++E  V++ +    + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLK--KERLDWRKRFNIIEGISRGLLYLHRDS 600
           LG C+    + L+ + MP       L D ++  K+R+  +   N    I++G+ YL    
Sbjct: 75  LGICLTSTVQ-LVTQLMPY----GCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE-- 127

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
            +R++HRDL A N+L+    + KI+DFG+A++   ++ +  AD G+V
Sbjct: 128 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 173

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 17/158 (10%)

Query: 488 KLGQGGFGPVYWGRLKD---GQ---EIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLV 540
           +LGQG FG VY G  +D   G+    +AVK +++ AS +   EF+NE  V+      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 541 RLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           RLLG   +G+  +++ E M +       RSL     +   +     ++   +   I+ G+
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 133 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 68.0 bits (166), Expect = 3e-12
 Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 13/154 (8%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   RLK  G+  AVK L K        +E  M E  ++S  ++   +  L 
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRFNIIEGISRGLLYLHRDSRLR 603
           CC +  +++       N     L+F   K  R D  R RF   E  S  L++LH      
Sbjct: 63  CCFQTPDRLFFVMEFVNGG--DLMFHIQKSRRFDEARARFYAAEITS-ALMFLHDKG--- 116

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAK--IFGG 635
           II+RDLK  N+LLD E + K++DFGM K  IF G
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG 150

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 18/178 (10%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRL-------SKASGQGLEEFMNEVMVI 531
             NF++  K+G+G F  VY    L DG+ +A+K++       +KA     ++ + E+ ++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKAR----QDCLKEIDLL 56

Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGIS 590
            +L H N+++ L   +E  E  ++ E      L  ++    K++RL   R  +     + 
Sbjct: 57  KQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L ++H  S+ RI+HRD+K +N+ +      K+ D G+ + F      A +  +VGT
Sbjct: 117 SALEHMH--SK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 14/171 (8%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG-LEEFMNEVMVISKLQH---R 537
           +Q    +G+G +G VY G+ +  G+ +A+K ++  +    + +   EV ++S+L+     
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+ +  G  ++G    +I EY    S+  L+    K   +  +    II  +   L Y+H
Sbjct: 63  NITKYYGSYLKGPRLWIIMEYAEGGSVRTLM----KAGPIAEKYISVIIREVLVALKYIH 118

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +     +IHRD+KA+NIL+    N K+ DFG+A +   N  +  T   VGT
Sbjct: 119 KVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST--FVGT 164

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 67.1 bits (163), Expect = 4e-12
 Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 10/162 (6%)

Query: 488 KLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+K+++       E  +NE++V+ + ++ N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 86  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIH 138

Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG        Q +  T  +VGT
Sbjct: 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 42/150 (28%), Positives = 84/150 (56%), Gaps = 9/150 (6%)

Query: 488 KLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEF-MNEVMVISKLQHRNLVRLLG 544
           K+G+G +G V+  + ++  EI A+KR+      +G+    + E+ ++ +L+H+N+VRL  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                ++  L++EY  ++ L    FD    + +D     + +  + +GL + H      +
Sbjct: 67  VLHSDKKLTLVFEYC-DQDLKKY-FDSCNGD-IDPEIVKSFMFQLLKGLAFCHSH---NV 120

Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +HRDLK  N+L+++    K++DFG+A+ FG
Sbjct: 121 LHRDLKPQNLLINKNGELKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 66.7 bits (163), Expect = 6e-12
 Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 9/161 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FMNEVMVISKLQHR 537
             ++    +G+G +G V   + K+ GQ +A+K+  ++    + +   M E+ ++ +L+H 
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           NLV L+      +   L++E++ +  LD L   P   +    RK    +  I RG+ + H
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRK---YLFQILRGIEFCH 117

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +   IIHRD+K  NIL+ +    K+ DFG A+      +
Sbjct: 118 SHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 67.2 bits (164), Expect = 6e-12
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 11/155 (7%)

Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
             A+  + +   L  G  G V+    K GQ   V  + K  GQ     + E M++  + H
Sbjct: 62  VVASLGYTVIKTLTPGSEGRVFVAT-KPGQPDPV--VLKI-GQKGTTLI-EAMLLQNVNH 116

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            +++R+    V G    ++   +P+ S D   +   +   L   +   I + I  GL YL
Sbjct: 117 PSVIRMKDTLVSGAITCMV---LPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYL 173

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           H     RIIHRD+K  NI +++     I D G A+
Sbjct: 174 HA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQ 205

Length = 357

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 65.8 bits (161), Expect = 6e-12
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 22/166 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
           +F+L   +G+G FG V   + +D +++ A+K ++K        +   +NE  ++ +L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLD-WRKRFNIIEGISR 591
            LV L     + EE M    Y+    +D LL     +   +K +    + +F I E I  
Sbjct: 61  FLVNLWYS-FQDEENM----YL---VVDLLLGGDLRYHLSQKVKFSEEQVKFWICE-IVL 111

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            L YLH      IIHRD+K  NILLDE+ +  I+DF +A     + 
Sbjct: 112 ALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 66.3 bits (161), Expect = 7e-12
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 87  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139

Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG  A+I     +Q+    +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVGT 179

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 66.5 bits (162), Expect = 7e-12
 Identities = 57/175 (32%), Positives = 90/175 (51%), Gaps = 28/175 (16%)

Query: 481 NNFQLSSKLGQGGFGPVY----WGRLKDGQE----IAVKRLS-KASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V     +G  K   +    +AVK L   A+ + L + ++E M +
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISE-MEL 70

Query: 532 SKL--QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KER 576
            KL  +H+N++ LLG C +     +I EY    +L   L           FD  K  +E+
Sbjct: 71  MKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130

Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L ++   +    ++RG+ YL  +SR R IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 131 LSFKDLVSCAYQVARGMEYL--ESR-RCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 66.2 bits (161), Expect = 7e-12
 Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 15/170 (8%)

Query: 483 FQLSSKLGQGGFGPVYWG---RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           F    ++G+G FG V+ G   R +    I +  L +A  + +E+   E+ V+S+     +
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYV 64

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            +  G  ++G +  +I EY+   S LD L   P  + ++       +++ I +GL YLH 
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLHS 119

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           + +   IHRD+KA+N+LL E+ + K++DFG+A      Q + +T   VGT
Sbjct: 120 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 164

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 66.3 bits (162), Expect = 8e-12
 Identities = 49/181 (27%), Positives = 95/181 (52%), Gaps = 27/181 (14%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEF----MNEVMVISKLQHR 537
           F +  ++G+G +G VY  R KD G+ +A+K++   + +  E F    + E+ ++ +L HR
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHR 66

Query: 538 NLVRLLGCCVEGEEKM----------LIYEYMPNRSLDALLFDPLKKERLDWRKRFN--I 585
           N+V L     + ++ +          L++EYM     D  L   L+   + + +      
Sbjct: 67  NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYM-----DHDLMGLLESGLVHFSEDHIKSF 121

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           ++ +  GL Y H+ + L   HRD+K SNILL+ +   K++DFG+A+++   + +  T +V
Sbjct: 122 MKQLLEGLNYCHKKNFL---HRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKV 178

Query: 646 V 646
           +
Sbjct: 179 I 179

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 65.8 bits (160), Expect = 9e-12
 Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 8/150 (5%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAV-KRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +++  +LG G FG VY  + K+   +A  K +   S + LE++M E+ +++   H N+V+
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 66

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII-EGISRGLLYLHRDS 600
           LL          ++ E+    ++DA++   L+ ER     +  ++ +     L YLH + 
Sbjct: 67  LLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTEPQIRVVCKQTLEALNYLHEN- 122

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
             +IIHRDLKA NIL   + + K++DFG++
Sbjct: 123 --KIIHRDLKAGNILFTLDGDIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 65.8 bits (160), Expect = 9e-12
 Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 11/153 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           ++++L  ++G G +G VY  R L  G+  AVK +    G        E+ ++ + +H N+
Sbjct: 9   HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI 68

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDAL--LFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           V   G  +  E+  +  EY    SL  +  +  PL + ++ +  R  +     +GL YLH
Sbjct: 69  VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETL-----QGLAYLH 123

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
              ++   HRD+K +NILL +  + K++DFG+A
Sbjct: 124 SKGKM---HRDIKGANILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 488 KLGQGGFGPV---YWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V    +   K  + +AVK L   +      +E + E  V+ +L +  +VR+
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    K + +  +    ++  +S G+ YL   +  
Sbjct: 62  IGIC-EAESWMLVMELAELGPLNKFL---QKNKHVTEKNITELVHQVSMGMKYLEETN-- 115

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K  G +++
Sbjct: 116 -FVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN 150

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 30/163 (18%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN--EVMVISKLQ-HRN 538
           +++  K+G+G F  V   +  K G+  A+K + K   + LE+  N  E+  + +L  H N
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLREIQALRRLSPHPN 59

Query: 539 LVRLLGCCVEGEEK----------MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
           ++RL+    + +            M +YE +  R           K  L  ++  + +  
Sbjct: 60  ILRLIEVLFDRKTGRLALVFELMDMNLYELIKGR-----------KRPLPEKRVKSYMYQ 108

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + + L ++HR+    I HRD+K  NIL+ +++  K++DFG  +
Sbjct: 109 LLKSLDHMHRNG---IFHRDIKPENILIKDDI-LKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 15/167 (8%)

Query: 485 LSSKLGQGGFGPVYW---------GRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ 535
           L  +LG+G FG VY           RLK  +EI V  L+        +   E  ++SKL 
Sbjct: 4   LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNE---TVQANQEAQLLSKLD 60

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H  +V+     +E +   +I EY   R LD  L +     +     +  + E   + LL 
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQ--VCEWFIQLLLG 118

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           +H   + RI+HRDLKA NI L   L  KI DFG++++  G+ D A T
Sbjct: 119 VHYMHQRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 19/176 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVK--RLSKASGQGLEEFMNEVMVISKLQHRN 538
            F+  +++G+G +G VY  R     EI A+K  R+           + E+ ++  L+H N
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67

Query: 539 LVRLLGCCV--EGEEKMLIYEYMPNRSLDALLFD---PLKKERLDWRKRFNIIEGISRGL 593
           +V L    V    +   L+ EY   + L +LL +   P  + ++       ++  + RGL
Sbjct: 68  IVELKEVVVGKHLDSIFLVMEYC-EQDLASLLDNMPTPFSESQVK-----CLMLQLLRGL 121

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
            YLH +    IIHRDLK SN+LL ++   KI+DFG+A+ + G   +  T +VV TL
Sbjct: 122 QYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY-GLPAKPMTPKVV-TL 172

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 65.7 bits (161), Expect = 2e-11
 Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 34/165 (20%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMN---------EVMVIS 532
           +++  KLG+G +G V+    +  +E+ A+K++  A       F N         E+M + 
Sbjct: 9   YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDA-------FRNATDAQRTFREIMFLQ 61

Query: 533 KL-QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERL-DWRKRFNII 586
           +L  H N+V+LL   V   E      L++EYM     +  L   ++   L D  KR+ I+
Sbjct: 62  ELGDHPNIVKLLN--VIKAENDKDIYLVFEYM-----ETDLHAVIRANILEDVHKRY-IM 113

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             + + L Y+H  S   +IHRDLK SNILL+ +   K++DFG+A+
Sbjct: 114 YQLLKALKYIH--SG-NVIHRDLKPSNILLNSDCRVKLADFGLAR 155

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 13/152 (8%)

Query: 483 FQLSSKLGQGGFGPVYWG---RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           F    K+G+G FG V+ G   R +    I +  L +A  + +E+   E+ V+S+     +
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYV 64

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            +  G  ++  +  +I EY+   S LD L   PL + ++       I+  I +GL YLH 
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHS 119

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           + +   IHRD+KA+N+LL E    K++DFG+A
Sbjct: 120 EKK---IHRDIKAANVLLSEHGEVKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 8/142 (5%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V     K  G+++AVK++     Q  E   NEV+++    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + R L YLH      +IH
Sbjct: 89  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 141

Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFG 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 65.0 bits (159), Expect = 3e-11
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 33/173 (19%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN---------EVMVISKLQHRN 538
           +G G +G V        G+++A+K+LS         F +         E+ ++  + H N
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLS-------RPFQSAIHAKRTYRELRLLKHMDHEN 75

Query: 539 LVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYL 596
           ++ LL             + Y+    + A L + +K ++L D   +F ++  I RGL Y+
Sbjct: 76  VIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQF-LVYQILRGLKYI 134

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD---TGRVV 646
           H      IIHRDLK SNI ++E+   KI DFG+A+         D   TG V 
Sbjct: 135 HS---AGIIHRDLKPSNIAVNEDCELKILDFGLAR-------HTDDEMTGYVA 177

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 24/164 (14%)

Query: 489 LGQGGFGPVYWGRLKD------GQEIAVKRL-SKASGQGLEEFMNEVMVISKL-QHRNLV 540
           LG+G FG V                +AVK L   A+ + L + ++E+ ++  + +H+N++
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79

Query: 541 RLLGCCVEGEEKMLIYEYM-------------PNRSLDALLFDPLKKERLDWRKRFNIIE 587
            LLG C +     ++ EY              P     +       +E L  +   +   
Sbjct: 80  NLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY 139

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++RG+ +L   S+ + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 140 QVARGMEFL--ASK-KCIHRDLAARNVLVTEDHVMKIADFGLAR 180

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 17/157 (10%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKL-QHRNLVRLL 543
           LG+G FG V    LK   E+ AVK L K        +E  M E  V++   +H  L +L 
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLH 62

Query: 544 GCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDW-RKRFNIIEGISRGLLYLHRDSR 601
             C + ++++  + EY+    L   +F   +  R D  R RF   E I  GL +LH    
Sbjct: 63  -SCFQTKDRLFFVMEYVNGGDL---MFHIQRSGRFDEPRARFYAAE-IVLGLQFLHERG- 116

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK--IFGGN 636
             II+RDLK  N+LLD E + KI+DFGM K  I GG 
Sbjct: 117 --IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV 151

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 16/158 (10%)

Query: 487 SKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ---HRNLV 540
           +++G G +G VY  R    G  +A+K +   + + GL    + EV ++ +L+   H N+V
Sbjct: 6   AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIV 65

Query: 541 RLLGCC----VEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           RL+  C     + E K+ L++E++ ++ L   L D +    L      +++    RGL +
Sbjct: 66  RLMDVCATSRTDRETKVTLVFEHV-DQDLRTYL-DKVPPPGLPAETIKDLMRQFLRGLDF 123

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           LH +    I+HRDLK  NIL+      K++DFG+A+I+
Sbjct: 124 LHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 489 LGQGGFGPVYWGRLK--DGQE--IAVKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           LG G FG +  G LK    +E  +A+  L +  S +    F+ E + + +  H N+VRL 
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G    G   M++ EYM N +LD+ L    K E +L   +   ++ G++ G+ YL   S +
Sbjct: 73  GVITRGNTMMIVTEYMSNGALDSFL---RKHEGQLVAGQLMGMLPGLASGMKYL---SEM 126

Query: 603 RIIHRDLKASNILLDEELNPKISDFG 628
             +H+ L A  +L++ +L  KIS F 
Sbjct: 127 GYVHKGLAAHKVLVNSDLVCKISGFR 152

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 13/149 (8%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+G FG V    LK   E+ A+K L K        ++  M E  +++       +  L 
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 545 CCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDW-RKRFNIIEGISRGLLYLHRDSRL 602
           CC + ++++  + EY+    L   +F   +  + D  R RF   E ++  L++LHR    
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDL---MFQIQRSRKFDEPRSRFYAAE-VTLALMFLHRHG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            +I+RDLK  NILLD E + K++DFGM K
Sbjct: 117 -VIYRDLKLDNILLDAEGHCKLADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 64.8 bits (158), Expect = 3e-11
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 16/170 (9%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQH 536
           TN +     +G G FG V   R    GQ +A+K++ K  ++    +    E+ ++  L+H
Sbjct: 9   TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH 68

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWRKRFNIIEGISRGLLY 595
            N++ L    +   E +     +    L  LL   PL+K+ + +      +  I RGL Y
Sbjct: 69  ENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQY-----FLYQILRGLKY 123

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           +H      ++HRDLK SNIL++E  + KI DFG+A+I    QD   TG V
Sbjct: 124 VHSAG---VVHRDLKPSNILINENCDLKICDFGLARI----QDPQMTGYV 166

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 64.0 bits (156), Expect = 3e-11
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 11/152 (7%)

Query: 485 LSSKLGQGGFGPVYWG--RLKDGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKLQHRNL 539
           L   +G+G FG VY G     + ++I  AVK      S    E+F+ E  ++ +  H ++
Sbjct: 10  LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI 69

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+L+G   E     ++ E  P   L + L   + K  LD          +S  L YL   
Sbjct: 70  VKLIGVITE-NPVWIVMELAPLGELRSYL--QVNKYSLDLASLILYSYQLSTALAYLES- 125

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              R +HRD+ A N+L+      K+ DFG+++
Sbjct: 126 --KRFVHRDIAARNVLVSSPDCVKLGDFGLSR 155

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +F+L  ++G G +G VY  R +  G+  A+K +    G+       E++++   +H N+V
Sbjct: 10  DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDAL--LFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
              G  +  ++  +  E+    SL  +  +  PL + ++ +  R  +     +GL YLH 
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETL-----QGLYYLHS 124

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
             +   +HRD+K +NILL +  + K++DFG++
Sbjct: 125 KGK---MHRDIKGANILLTDNGHVKLADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 10/147 (6%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V   ++K  G+  A K+L K      +G +  +NE  ++ K+  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
              E ++ + L+   M    L   +++  +    + R  F   + I  GL +LH+    R
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQ-IICGLEHLHQ---RR 115

Query: 604 IIHRDLKASNILLDEELNPKISDFGMA 630
           I++RDLK  N+LLD+  N +ISD G+A
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 4e-11
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 22/171 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA----SGQGLEEFMNE--VMVISK 533
           ++F++   +G+G FG V+  R KD  ++ A+K L K+      Q       E  ++  + 
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAH-VRAERDILADAD 59

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLD--WRKRFNIIEGIS 590
                +V+L     + EE + L+ EYMP   L  LL   ++K+        RF I E + 
Sbjct: 60  --SPWIVKLY-YSFQDEEHLYLVMEYMPGGDLMNLL---IRKDVFPEET-ARFYIAELV- 111

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
              L L    +L  IHRD+K  NIL+D + + K++DFG+ K     +D+  
Sbjct: 112 ---LALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 64.1 bits (157), Expect = 5e-11
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 35/183 (19%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVMVIS 532
           ++L   +G G +G V      + G+++A+K++S         F +         E+ ++ 
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNV-------FDDLIDAKRILREIKLLR 54

Query: 533 KLQHRNLVRLLGCCV-EGEEKM----LIYEYMPNRSLDALLFD--PLKKERLDWRKRFNI 585
            L+H N++ LL        E      ++ E M    L  ++    PL  + + +      
Sbjct: 55  HLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQY-----F 108

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD--TG 643
           +  I RGL YLH  +   +IHRDLK SNIL++   + KI DFG+A+    ++D+    T 
Sbjct: 109 LYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTE 165

Query: 644 RVV 646
            VV
Sbjct: 166 YVV 168

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 63.1 bits (153), Expect = 7e-11
 Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 20/179 (11%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLS-KASGQGLE-EFMNEVMVISKLQ--- 535
           ++  +++G+G +G V+  R LK+G   +A+KR+  +   +G+    + EV V+  L+   
Sbjct: 3   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 62

Query: 536 HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           H N+VRL   C     + E K+ L++E++ ++ L   L D + +  +      +++  + 
Sbjct: 63  HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLL 120

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+     Q     VV TL
Sbjct: 121 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTL 173

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 62.8 bits (152), Expect = 8e-11
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 21/160 (13%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLV 540
           F+L   +G G +G VY GR +K GQ  A+K +   +G   EE   E+ ++ K   HRN+ 
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIA 66

Query: 541 RLLGCCVE------GEEKMLIYEYMPNRSLDALLFDP----LKKERLDWRKRFNIIEGIS 590
              G  ++       ++  L+ E+    S+  L+ +     LK+E + +     I   I 
Sbjct: 67  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----ICREIL 121

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           RGL +LH+    ++IHRD+K  N+LL E    K+ DFG++
Sbjct: 122 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 158

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 31/191 (16%)

Query: 464 KLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVKRLS- 514
           +L + P ++F     + +   L   LG+G FG V           + K+   +AVK L  
Sbjct: 3   ELPEDPRWEF-----SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKD 57

Query: 515 KASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL----- 568
            A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L     
Sbjct: 58  DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 117

Query: 569 ------FD--PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL 620
                 +D   +  E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+ E  
Sbjct: 118 PGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENN 174

Query: 621 NPKISDFGMAK 631
             KI+DFG+A+
Sbjct: 175 VMKIADFGLAR 185

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 23/166 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL---SKASGQGLEEF----MNEVMVISK 533
            ++  +++ +G +G VY  R K   EI A+K+L    +  G     F    + E+ ++ K
Sbjct: 6   EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG-----FPITSLREINILLK 60

Query: 534 LQHRNLVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           LQH N+V +    V G     IY   EY+ +  L +L+     K+     +   ++  + 
Sbjct: 61  LQHPNIVTVKEVVV-GSNLDKIYMVMEYVEH-DLKSLMET--MKQPFLQSEVKCLMLQLL 116

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
            G+ +LH +    I+HRDLK SN+LL+     KI DFG+A+ +G  
Sbjct: 117 SGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 14/170 (8%)

Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKASGQGLEEFMNEV 528
           +   E L   T+ +++   +G+G +G VY     KDG   AVK L   S    EE   E 
Sbjct: 11  MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEY 69

Query: 529 MVISKL-QHRNLVRLLGC------CVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWR 580
            ++  L  H N+V+  G        V G+   L+ E     S+  L+   L   +RLD  
Sbjct: 70  NILQSLPNHPNVVKFYGMFYKADKLVGGQ-LWLVLELCNGGSVTELVKGLLICGQRLDEA 128

Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
               I+ G   GL +LH +   RIIHRD+K +NILL  E   K+ DFG++
Sbjct: 129 MISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVS 175

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEE-FMNEVMVISKLQHRNLVRLLG 544
           LG GGFG V   ++K   +  A+K + K      G +E   +E  ++ +  H  +V+L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRL 602
              + +   ++ EY     L    +  L+   L  ++  RF  I  +     YLH     
Sbjct: 61  TFKDKKYIYMLMEYCLGGEL----WTILRDRGLFDEYTARF-YIACVVLAFEYLHN---R 112

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            II+RDLK  N+LLD     K+ DFG AK     Q
Sbjct: 113 GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 62.4 bits (151), Expect = 1e-10
 Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 29/165 (17%)

Query: 489 LGQGGFGPVYWGRLK-DGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLL 543
           +G+G FG V   R+K DG  +  A+KR+ + AS     +F  E+ V+ KL  H N++ LL
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LDWRKRFNII 586
           G C       L  EY P+ +L     D L+K R                 L  ++  +  
Sbjct: 63  GACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             ++RG+ YL   S+ + IHRDL A NIL+ E    KI+DFG+++
Sbjct: 119 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 160

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)

Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    +K  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 87  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLKALSVLHAQG---VIH 139

Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 29/165 (17%)

Query: 489 LGQGGFGPVYWGRLK-DGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLL 543
           +G+G FG V    +K DG ++  A+K L + AS     +F  E+ V+ KL  H N++ LL
Sbjct: 10  IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LDWRKRFNII 586
           G C       +  EY P  +L     D L+K R                 L  ++     
Sbjct: 70  GACENRGYLYIAIEYAPYGNL----LDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             ++ G+ YL   S  + IHRDL A N+L+ E L  KI+DFG+++
Sbjct: 126 SDVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSR 167

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 61.1 bits (148), Expect = 3e-10
 Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 24/178 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRN 538
            +++  K+G+G FG +Y  + K D +   +K   L+K   +  E    EV++++K++H N
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSL-------DALLFDPLKKERLDWRKRFNIIEGISR 591
           +V       E     ++ EY     L         +LF   + + L W  +      IS 
Sbjct: 61  IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFS--EDQILSWFVQ------ISL 112

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           GL ++H     +I+HRD+K+ NI L +  +  K+ DFG+A+    + + A T   VGT
Sbjct: 113 GLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGT 165

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 62.0 bits (150), Expect = 3e-10
 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 26/170 (15%)

Query: 485 LSSKLGQGGFGPVYWG--------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V           +      +AVK L   A+ + L + ++E+ ++  + 
Sbjct: 16  LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG 75

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     ++ EY    +L   L           FD  K  +E+L ++ 
Sbjct: 76  KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKD 135

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 136 LVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 61.0 bits (148), Expect = 4e-10
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 18/170 (10%)

Query: 482 NFQLSSKLGQGGFGPVYW----GRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISK 533
           NF+L   LG G +G V+     G    G+  A+K L KA+     +  E    E  V+  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDW-RKRFNIIEGISR 591
           ++    +  L    + + K+ LI +Y+    L   L+   ++E       R  I E I  
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLY---QREHFTESEVRVYIAE-IVL 116

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF-GGNQDQA 640
            L +LH+   L II+RD+K  NILLD E +  ++DFG++K F    +++A
Sbjct: 117 ALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 61.3 bits (149), Expect = 4e-10
 Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 28/162 (17%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL----- 542
           LG G  G V+     D  + +AVK++     Q ++  + E+ +I +L H N+V++     
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72

Query: 543 ---------LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISR 591
                    +G   E     ++ EYM     +  L + L++  L  +  + F  +  + R
Sbjct: 73  PSGSDLTEDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLSEEHARLF--MYQLLR 125

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKI 632
           GL Y+H  +   ++HRDLK +N+ ++ E+L  KI DFG+A+I
Sbjct: 126 GLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARI 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 60.8 bits (148), Expect = 4e-10
 Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 19/160 (11%)

Query: 487 SKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE-------FMNEVMVISKLQHRN 538
           SK+G+G +G V+  R ++ GQ +A+K+  ++     E+        + E+ ++ +L+H N
Sbjct: 7   SKIGEGSYGVVFKCRNRETGQIVAIKKFVES-----EDDPVIKKIALREIRMLKQLKHPN 61

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           LV L+       +  L++EY  +  L+ L  +P        +K   II    + + + H+
Sbjct: 62  LVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKK---IIWQTLQAVNFCHK 118

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                 IHRD+K  NIL+ ++   K+ DFG A+I  G  D
Sbjct: 119 ---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 60.8 bits (147), Expect = 6e-10
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 8/146 (5%)

Query: 488 KLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  VY GR K     +A+K +     +G     + EV ++  L+H N+V L   
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
               +   L++EY+ ++ L   L D      +   K F  +  + RGL Y HR    +++
Sbjct: 73  IHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLF--LFQLLRGLNYCHRR---KVL 126

Query: 606 HRDLKASNILLDEELNPKISDFGMAK 631
           HRDLK  N+L++E    K++DFG+A+
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 60.8 bits (147), Expect = 6e-10
 Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 488 KLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  V+ GR K  +  +A+K +     +G     + EV ++  L+H N+V L   
Sbjct: 13  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
               +   L++EY+ ++ L   + D      +   K F  +  I RGL Y HR    +++
Sbjct: 73  VHTDKSLTLVFEYL-DKDLKQYMDDCGNIMSMHNVKIF--LYQILRGLAYCHRR---KVL 126

Query: 606 HRDLKASNILLDEELNPKISDFGMAK 631
           HRDLK  N+L++E    K++DFG+A+
Sbjct: 127 HRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 26/170 (15%)

Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  K+      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 22  LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 81

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDP--LKKERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P  + +E+L ++ 
Sbjct: 82  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKD 141

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 142 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 188

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 60.6 bits (147), Expect = 7e-10
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 16/125 (12%)

Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF--N 584
           E+ ++  + H N+V+         E  ++ E+M   SL+               ++F  +
Sbjct: 122 EIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG---------THIADEQFLAD 172

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           +   I  G+ YLHR     I+HRD+K SN+L++   N KI+DFG+++I     D  ++  
Sbjct: 173 VARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSS- 228

Query: 645 VVGTL 649
            VGT+
Sbjct: 229 -VGTI 232

Length = 353

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 60.5 bits (147), Expect = 8e-10
 Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 14/156 (8%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA---SGQGLEEFMNE---VMVISKLQ 535
           F+  + LG+G FG V     K  G+  A+K L K    +   +E  M E       +  +
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H  LV L  C    +    + EY     L   +   +  E    R  F     +  GL Y
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEP---RAVFYAAC-VVLGLQY 116

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           LH +   +I++RDLK  N+LLD E   KI+DFG+ K
Sbjct: 117 LHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCK 149

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 60.4 bits (147), Expect = 1e-09
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 19/160 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNL 539
            +Q  S +G+G +G V        G ++A+K++S    Q   +  + E+ ++ + +H N+
Sbjct: 6   RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI 65

Query: 540 VRLLGC-CVEGEEKM----LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
           + +L        E      ++ E M        L+  +K + L  D  + F  +  I RG
Sbjct: 66  IGILDIIRPPSFESFNDVYIVQELMETD-----LYKLIKTQHLSNDHIQYF--LYQILRG 118

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           L Y+H  +   ++HRDLK SN+LL+   + KI DFG+A+I
Sbjct: 119 LKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISK-LQHRNLVRLL 543
           +G+G FG V   + K DG+  AVK L K +    +E    M E  V+ K ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSR 601
                 ++   + +Y+    L    F  L++ER   + R RF   E I+  L YLH    
Sbjct: 63  YSFQTADKLYFVLDYVNGGEL----FFHLQRERSFPEPRARFYAAE-IASALGYLHS--- 114

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L II+RDLK  NILLD + +  ++DFG+ K
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 59.0 bits (143), Expect = 2e-09
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 26/162 (16%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
           + +    +G G FG V+  R +  +   A+K ++       +  +   NE  V+ ++ H 
Sbjct: 2   DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61

Query: 538 NLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG------I 589
            ++RL     E +++ L  + EY+P   L    F  L+        RF+   G      I
Sbjct: 62  FIIRLF--WTEHDQRFLYMLMEYVPGGEL----FSYLRN-----SGRFSNSTGLFYASEI 110

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              L YLH      I++RDLK  NILLD+E + K++DFG AK
Sbjct: 111 VCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAK 149

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 18/176 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHR 537
           NFQ+  K+G+G F  VY    L D + +A+K++        +  ++ + E+ ++ +L H 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-----WRKRFNIIEGISRG 592
           N+++ L   +E  E  ++ E      L  ++    K++RL      W+    +   +   
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE-- 120

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
               H  SR R++HRD+K +N+ +      K+ D G+ + F      A +  +VGT
Sbjct: 121 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISK-LQHRNLVRLL 543
           +G+G FG V   + K DG   AVK L K +    +E    M E  V+ K L+H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLH 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSR 601
                 E+   + +Y+    L    F  L++ER  L+ R RF   E ++  + YLH    
Sbjct: 63  YSFQTAEKLYFVLDYVNGGEL----FFHLQRERCFLEPRARFYAAE-VASAIGYLHS--- 114

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           L II+RDLK  NILLD + +  ++DFG+ K   G + +  T    GT
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCK--EGVEPEETTSTFCGT 159

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 58.7 bits (142), Expect = 3e-09
 Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 18/152 (11%)

Query: 489 LGQGGFGPVYWGRLK----DGQEIAVKRLSKASGQGLEEF--MNEVMVISKLQHRNLVRL 542
           LGQG FG V+  R       GQ  A+K L KA+ +  +      E  +++++ H  +V+L
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63

Query: 543 LGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRD 599
                + E K+ LI +++  R  D  LF  L KE +  +   +F + E ++  L +LH  
Sbjct: 64  -HYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALALDHLHS- 116

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             L II+RDLK  NILLDEE + K++DFG++K
Sbjct: 117 --LGIIYRDLKPENILLDEEGHIKLTDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 21/160 (13%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLV 540
           F+L   +G G +G VY GR +K GQ  A+K +     +  EE   E+ ++ K   HRN+ 
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-EEIKLEINMLKKYSHHRNIA 76

Query: 541 RLLGCCVE------GEEKMLIYEYMPNRSLDALLF----DPLKKERLDWRKRFNIIEGIS 590
              G  ++       ++  L+ E+    S+  L+     + LK++ + +     I   I 
Sbjct: 77  TYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY-----ICREIL 131

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           RGL +LH     ++IHRD+K  N+LL E    K+ DFG++
Sbjct: 132 RGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 58.2 bits (141), Expect = 4e-09
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 32/171 (18%)

Query: 484 QLSSKLGQGGFGPVYWGR-LKDGQEIAVKR--LSKASGQGLEEFMN------------EV 528
           Q  + LG+G +G V        G+ +A+K+  + + S    ++               E+
Sbjct: 12  QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLREL 71

Query: 529 MVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDA--LLFDPLKKERLDWRKRF 583
            ++++++H N++ L+   VEG+   L+ + M +   + +D    L +   K         
Sbjct: 72  KIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVK--------- 122

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            I+  I  GL  LH+      +HRDL  +NI ++ +   KI+DFG+A+ +G
Sbjct: 123 CILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYG 170

Length = 335

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 57.9 bits (140), Expect = 5e-09
 Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 15/150 (10%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVIS-KLQHRNLVRLL 543
           LG+G FG V    LK   E  A+K L K        +E  M E  V++   +H  L  L 
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62

Query: 544 GCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLYLHRDSR 601
            C  + +E +  + EY+    L   +F      R D  R RF   E I  GL +LH+   
Sbjct: 63  -CTFQTKEHLFFVMEYLNGGDL---MFHIQSSGRFDEARARFYAAEIIC-GLQFLHKKG- 116

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
             II+RDLK  N+LLD++ + KI+DFGM K
Sbjct: 117 --IIYRDLKLDNVLLDKDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 57.0 bits (138), Expect = 9e-09
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 14/150 (9%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRL-SKASGQGLEEFMNEVMVISKLQH-RNLVRLLGC 545
           +G+G FG V     K  G  +AVKR+ S    +  +  + ++ V+ +      +V+  G 
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71

Query: 546 CV-EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----RGLLYLHRDS 600
              EG+  + + E M + SLD   F     E L       I+  I+    + L YL  + 
Sbjct: 72  LFREGDCWICM-ELM-DISLD--KFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE- 126

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
            L+IIHRD+K SNILLD   N K+ DFG++
Sbjct: 127 -LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 57.2 bits (138), Expect = 9e-09
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 20/166 (12%)

Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLG- 544
           +G G +G V      + G+++A+K+LS+   S    +    E+ ++  +QH N++ LL  
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 545 --CCVEGEEKMLIYEYMP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               V G+E    Y  MP     L  ++  PL ++++ +     ++  +  GL Y+H   
Sbjct: 83  FTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQY-----LVYQMLCGLKYIHSAG 137

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
              IIHRDLK  N+ ++E+   KI DFG+A+    + D   TG VV
Sbjct: 138 ---IIHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV 176

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 56.9 bits (137), Expect = 1e-08
 Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 15/157 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+G FG V    LK  G+  AVK L K        +E  M E  V++       +  L 
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62

Query: 545 CCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLYLHRDSRL 602
           C  + +E +  + E++    L   +F    K R D +R  F   E I  GL +LH     
Sbjct: 63  CTFQTKEHLFFVMEFLNGGDL---MFHIQDKGRFDLYRATFYAAE-IVCGLQFLHSKG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK--IFGGNQ 637
            II+RDLK  N++LD + + KI+DFGM K  +FG N+
Sbjct: 117 -IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR 152

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 22/153 (14%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  V+ GR K     +A+K +     +G     + EV ++  L+H N+V L   
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS-------RGLLYLHR 598
                   L++EY     LD+ L     K+ LD       +  +        RGL Y H+
Sbjct: 72  IHTERCLTLVFEY-----LDSDL-----KQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK 121

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               +I+HRDLK  N+L++E+   K++DFG+A+
Sbjct: 122 R---KILHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 2e-08
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 32/158 (20%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  VY GR K  GQ +A+K +     +G     + E  ++  L+H N+V  L  
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV-TLHD 70

Query: 546 CVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKR-----------FNIIEGISRGL 593
            +  ++ + L++EY+ +  L         K+ +D               F ++    RGL
Sbjct: 71  IIHTKKTLTLVFEYL-DTDL---------KQYMDDCGGGLSMHNVRLFLFQLL----RGL 116

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            Y H+    R++HRDLK  N+L+ E    K++DFG+A+
Sbjct: 117 AYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  VY G  + +GQ +A+K +S  + +G+    + E  ++  L+H N+V L   
Sbjct: 12  KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDI 71

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK-RFNIIEGISRGLLYLHRDSRLRI 604
               E    ++EYM       ++  P      + R   F ++    RGL Y+H      I
Sbjct: 72  IHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLL----RGLAYIHGQ---HI 124

Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
           +HRDLK  N+L+      K++DFG+A+
Sbjct: 125 LHRDLKPQNLLISYLGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 15/167 (8%)

Query: 489 LGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG+GGFG V        G++   +++  KR+ K  G+ +   +NE  ++ K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA--LNEKQILEKVNSRFVVSL 65

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                  +   L+   M    L   ++   +    + R  F   E I  GL  LH++   
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAE-ICCGLEDLHQE--- 121

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           RI++RDLK  NILLD+  + +ISD G+A      + Q   GR VGT+
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHV--PEGQTIKGR-VGTV 165

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 55.2 bits (133), Expect = 3e-08
 Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 14/150 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V   +++  G+  A K+L+K      +G E  M E  +++K+  R +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL-A 59

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDW---RKRFNIIEGISRGLLYLHRDS 600
              + +  + L+   M    L   +++ + +E   +   R  F   + IS GL +LH+  
Sbjct: 60  YAFQTKTDLCLVMTIMNGGDLRYHIYN-VDEENPGFPEPRACFYTAQIIS-GLEHLHQR- 116

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
             RII+RDLK  N+LLD + N +ISD G+A
Sbjct: 117 --RIIYRDLKPENVLLDNDGNVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 19/171 (11%)

Query: 483 FQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKLQH 536
           +Q  + +G G +G V   Y  RL+  Q++AVK+LS+   Q L        E+ ++  ++H
Sbjct: 17  YQNLTPVGSGAYGSVCSAYDTRLR--QKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKH 73

Query: 537 RNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
            N++ LL             E Y+    + A L + +K ++L D   +F +I  + RGL 
Sbjct: 74  ENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQF-LIYQLLRGLK 132

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           Y+H      IIHRDLK SN+ ++E+   +I DFG+A+      D   TG V
Sbjct: 133 YIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR----QADDEMTGYV 176

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 55.5 bits (133), Expect = 3e-08
 Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
           ++++   KLG+G +  VY G+ K +G+ +A+K  RL +  G      + E  ++  L+H 
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTA-IREASLLKGLKHA 63

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V L       E   L++EY+       +   P      +  K F  +  + RGL Y+H
Sbjct: 64  NIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHP-GGLHPENVKLF--LFQLLRGLSYIH 120

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +     I+HRDLK  N+L+ +    K++DFG+A+
Sbjct: 121 QRY---ILHRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 21/158 (13%)

Query: 489 LGQGGFGPVYWG---RLKDGQ-----EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           LGQG F  ++ G    + D       E+ +K L K+     E F     ++S+L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
              G CV G+E +++ EY+   SLD  L        + W  +  + + ++  L +L    
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLEDKG 120

Query: 601 RLRIIHRDLKASNILLDEEL-----NP---KISDFGMA 630
              + H ++ A N+LL  E      NP   K+SD G++
Sbjct: 121 ---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 54.8 bits (132), Expect = 3e-08
 Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 27/174 (15%)

Query: 487 SKLGQGGFGPVYWGRLK-DGQEIAVKRL--SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
            K+G+G FG     + K DG++  +K +  SK S +  EE   EV V+S ++H N+V+  
Sbjct: 6   KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQ 65

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER---------LDWRKRFNIIEGISRGLL 594
               E     ++ +Y     L    +  +  +R         LDW  +      I   L 
Sbjct: 66  ESFEENGNLYIVMDYCEGGDL----YKKINAQRGVLFPEDQILDWFVQ------ICLALK 115

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           ++H     +I+HRD+K+ NI L ++   K+ DFG+A++     + A T   +GT
Sbjct: 116 HVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART--CIGT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+G FG V+   LK   Q  A+K L K        +E  M E  V+S       +  L 
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62

Query: 545 CCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDW-RKRFNIIEGISRGLLYLHRDSRL 602
           C  + +E +  + EY+    L   +F      + D  R  F   E I  GL +LH     
Sbjct: 63  CTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAE-IICGLQFLHSKG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            I++RDLK  NILLD + + KI+DFGM K
Sbjct: 117 -IVYRDLKLDNILLDTDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 56.4 bits (136), Expect = 4e-08
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 467 DLPLFQFEELATATNNFQLSSK-----LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG 520
           +L  F  +   + T N  LSS      + +G  G  Y G+ +K+G +  VK ++  +   
Sbjct: 671 ELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP 730

Query: 521 LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
             E  +    + KLQH N+V+L+G C   +   LI+EY+  ++L  +L        L W 
Sbjct: 731 SSEIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL------RNLSWE 780

Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI 624
           +R  I  GI++ L +LH      ++  +L    I++D +  P +
Sbjct: 781 RRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824

Length = 968

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 55.4 bits (133), Expect = 4e-08
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNL 539
           +Q  S +G G +G V      K G  +AVK+LS+   S    +    E+ ++  ++H N+
Sbjct: 19  YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 78

Query: 540 VRLLGCCVEGEE-KMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYLH 597
           + LL         +     Y+    + A L + +K ++L D   +F +I  I RGL Y+H
Sbjct: 79  IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIH 137

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
                 IIHRDLK SN+ ++E+   KI DFG+A+    + D   TG V
Sbjct: 138 SAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYV 178

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 54.6 bits (131), Expect = 4e-08
 Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 18/176 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHR 537
           NF++  K+G+G F  VY    L DG  +A+K++        +   + + E+ ++ +L H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKK---ERLDWRKRFNIIEGISRG 592
           N+++     +E  E  ++ E      L  ++  F   K+   E+  W+    +   +   
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE-- 120

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
               H  SR R++HRD+K +N+ +      K+ D G+ + F      A +  +VGT
Sbjct: 121 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 56.0 bits (135), Expect = 5e-08
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 32/165 (19%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMNEVMVISKLQHRN--- 538
           F +   + +G FG VY GR K+  ++ AVK + KA      + +N+ MV      R+   
Sbjct: 6   FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKA------DMINKNMVHQVQAERDALA 59

Query: 539 ------LVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIE 587
                 +V L           L+ EY+    + +LL     FD    E +       I E
Sbjct: 60  LSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFD----EEM---AVKYISE 112

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
            ++  L YLHR     IIHRDLK  N+L+  E + K++DFG++K+
Sbjct: 113 -VALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 55.0 bits (133), Expect = 5e-08
 Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 3/43 (6%)

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + RGL Y+H  +   +IHRDLK SN+L++E+   +I DFGMA+
Sbjct: 116 LLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR 155

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 54.8 bits (132), Expect = 6e-08
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 20/159 (12%)

Query: 489 LGQGGFGPVYWGRLKDGQE----IAVKRLSKA----SGQGLEEFMNEVMVISKLQHRNLV 540
           LG+GG+G V+  R   G +     A+K L KA    + +       E  ++  ++H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHR 598
            L+     G +  LI EY+    L    F  L++E   ++    F + E IS  L +LH+
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGEL----FMHLEREGIFMEDTACFYLSE-ISLALEHLHQ 118

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK--IFGG 635
                II+RDLK  NILLD + + K++DFG+ K  I  G
Sbjct: 119 ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 54.1 bits (130), Expect = 7e-08
 Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 12/154 (7%)

Query: 483 FQLSSKLGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
           F+    LG+GGFG V        G++   +++  KR+ K  G+ +   +NE  ++ K+  
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNS 59

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           R +V L       +   L+   M    L   +++       + R  F   E I+ GL  L
Sbjct: 60  RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAE-ITCGLEDL 118

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           HR+   RI++RDLK  NILLD+  + +ISD G+A
Sbjct: 119 HRE---RIVYRDLKPENILLDDYGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 54.2 bits (130), Expect = 8e-08
 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 19/166 (11%)

Query: 489 LGQGGFGPV-YWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLLGC 545
           +G G +G V      + G ++A+K+L +     L  +    E+ ++  ++H N++ LL  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLD- 81

Query: 546 CVEGEEKML-----IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            V   +  L      Y  MP    D  L   +K E+L   +   ++  + +GL Y+H   
Sbjct: 82  -VFTPDLSLDRFHDFYLVMPFMGTD--LGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG 138

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
              IIHRDLK  N+ ++E+   KI DFG+A+      D   TG VV
Sbjct: 139 ---IIHRDLKPGNLAVNEDCELKILDFGLAR----QTDSEMTGYVV 177

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   R K   +  A+K L K      +E    + E  V+   +H  L  L  
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKY 62

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRL 602
                +    + EY     L    F  L +ER+  + R RF   E +S  L YLH     
Sbjct: 63  SFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS-ALGYLHSCD-- 115

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            +++RDLK  N++LD++ + KI+DFG+ K
Sbjct: 116 -VVYRDLKLENLMLDKDGHIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 557 EYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           E+M   SLD +     P+  E L       I   +  GL YL+  +  RI+HRD+K SNI
Sbjct: 83  EFMDCGSLDRIYKKGGPIPVEILG-----KIAVAVVEGLTYLY--NVHRIMHRDIKPSNI 135

Query: 615 LLDEELNPKISDFGMA 630
           L++     K+ DFG++
Sbjct: 136 LVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 15/150 (10%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNEVMVISK-LQHRNLVRLL 543
           +G+G FG V   R K  ++  AVK L K +    +E    M+E  V+ K ++H  LV L 
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSR 601
                 ++   + +Y+    L    F  L++ER  L+ R RF   E I+  L YLH    
Sbjct: 63  FSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAE-IASALGYLHS--- 114

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L I++RDLK  NILLD + +  ++DFG+ K
Sbjct: 115 LNIVYRDLKPENILLDSQGHIVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 31/166 (18%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           ++ ++  +LG+G +G V   R    G  +AVKR+ +A+            V S+ Q R L
Sbjct: 1   DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRI-RAT------------VNSQEQKRLL 47

Query: 540 VRL-----LGCCVE---------GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           + L        C            E  + I   + + SLD        K           
Sbjct: 48  MDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGK 107

Query: 586 IE-GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           I   I + L YLH  S+L +IHRD+K SN+L++     K+ DFG++
Sbjct: 108 IAVSIVKALEYLH--SKLSVIHRDVKPSNVLINRNGQVKLCDFGIS 151

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 31/163 (19%)

Query: 489 LGQGGFGPVYWGRLKD---------GQEIAVKR-LSKASGQGLEEFMNEVMVISKLQHRN 538
           LGQG F  +Y G L+          GQE++V   +  +  +    F     ++S+L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGISRGLL 594
           LV+L G CV  E  M + EY+    LD      L +E+    L W  + ++ + ++  L 
Sbjct: 63  LVKLYGVCVRDENIM-VEEYVKFGPLDVF----LHREKNNVSLHW--KLDVAKQLASALH 115

Query: 595 YLHRDSRLRIIHRDLKASNILL-----DEELNP--KISDFGMA 630
           YL      +++H ++   NIL+     +E   P  K+SD G+ 
Sbjct: 116 YLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 53.2 bits (128), Expect = 2e-07
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 13/161 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQHR 537
           +F     LG+G FG V     K   E+ A+K L K        +E  M E  V++     
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP 60

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             +  L  C +  +++  + EY+    L   ++   +  +            I+ GL +L
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGKFKEPHAVFYAAEIAIGLFFL 117

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK--IFGG 635
           H      II+RDLK  N++LD E + KI+DFGM K  IFGG
Sbjct: 118 HSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 15/158 (9%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G +G VY  + KDG++     L +  G G+      E+ ++ +L+H N++ L    
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 67

Query: 547 VEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRD 599
           +   ++   L+++Y  +     + F    K     +K   +  G+ + LLY     +H  
Sbjct: 68  LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHYL 124

Query: 600 SRLRIIHRDLKASNILL----DEELNPKISDFGMAKIF 633
               ++HRDLK +NIL+     E    KI+D G A++F
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 28/163 (17%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVM---VISKLQH 536
           N+ +   ++G G  G VY  R  K G  +AVK++ +   +  EE    +M   V+ K  H
Sbjct: 15  NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLK-SH 71

Query: 537 R--NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-------ERLDWRKRFNIIE 587
               +V+  G  +   +  +  E M      +   D L K       E +  +    I+ 
Sbjct: 72  DCPYIVKCYGYFITDSDVFICMELM------STCLDKLLKRIQGPIPEDILGKMTVAIV- 124

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
              + L YL    +  +IHRD+K SNILLD   N K+ DFG++
Sbjct: 125 ---KALHYL--KEKHGVIHRDVKPSNILLDASGNVKLCDFGIS 162

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 14/166 (8%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQHRNLVRLLGC 545
           +G+G +G V   R + DG++  +K+L+   AS +  +    E  ++S+L+H N+V     
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLHRDSRL 602
             EGE+ +L Y  M        L+  LK+++        ++E    I+  L YLH     
Sbjct: 68  W-EGEDGLL-YIVM-GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK--- 121

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            I+HRDLK  N+ L      K+ D G+A++     D A T  ++GT
Sbjct: 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST--LIGT 165

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G +G VY  + KDG++     L +  G G+      E+ ++ +L+H N++ L    
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67

Query: 547 VEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRD 599
           +   ++   L+++Y  +     + F    K     +K   +   + + LLY     +H  
Sbjct: 68  LSHSDRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPMQLPRSMVKSLLYQILDGIHYL 124

Query: 600 SRLRIIHRDLKASNILL----DEELNPKISDFGMAKIF 633
               ++HRDLK +NIL+     E    KI+D G A++F
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISK-LQHRNLVRLL 543
           +G+G FG V   + K DG+  AVK L K    + +  +  M E  V+ K ++H  LV L 
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLH 62

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSR 601
                 E+   + +++    L    F  L++ER   + R RF   E I+  L YLH    
Sbjct: 63  YSFQTTEKLYFVLDFVNGGEL----FFHLQRERSFPEPRARFYAAE-IASALGYLHS--- 114

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + I++RDLK  NILLD + +  ++DFG+ K
Sbjct: 115 INIVYRDLKPENILLDSQGHVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 15/149 (10%)

Query: 491 QGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMN----EVMVISKLQHRNLVRLLGC 545
           +G FG VY  + +  G   A+K L K+      +  N      +++ + +   + +L   
Sbjct: 6   KGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYS 65

Query: 546 CVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
               +   L+ EY+      +L+     L     DW K++  I  +  G+  LH+     
Sbjct: 66  FQSKDYLYLVMEYLNGGDCASLIKTLGGLP---EDWAKQY--IAEVVLGVEDLHQRG--- 117

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKI 632
           IIHRD+K  N+L+D+  + K++DFG+++ 
Sbjct: 118 IIHRDIKPENLLIDQTGHLKLTDFGLSRN 146

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 489 LGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG+GGFG V        G++   + +  KR+ K  G+ +   +NE  ++ K+  + +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMA--LNEKQILEKVNSQFVVNL 65

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                  +   L+   M    L   +++       + R  F   E I  GL  LHR++  
Sbjct: 66  AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAE-ILCGLEDLHREN-- 122

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA-KIFGGNQDQADTGRV 645
             ++RDLK  NILLD+  + +ISD G+A KI  G   +   G V
Sbjct: 123 -TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTV 165

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 52.3 bits (125), Expect = 4e-07
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQHR 537
           +F     LG+G FG V     K   E+ A+K L K        +E  M E  V++     
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP 60

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             +  L  C +  +++  + EY+   +   L++   +  +    +       IS GL +L
Sbjct: 61  PFLTQLHSCFQTVDRLYFVMEYV---NGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFL 117

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           HR     II+RDLK  N++LD E + KI+DFGM K
Sbjct: 118 HRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 53.3 bits (128), Expect = 4e-07
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 28/161 (17%)

Query: 505 GQEIAVKRLSKASGQGLEE---FMNEVMVISKLQHRNLVRLLGCCVEGEEKML-IYEYMP 560
           G E+A+K L   + +   +   F  E  + ++L H N+V LL         +  ++EY+P
Sbjct: 3   GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVP 62

Query: 561 NRSLDALL-----FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL 615
            R+L  +L         +  RL        +  +   L   H      I+HRDLK  NI+
Sbjct: 63  GRTLREVLAADGALPAGETGRL--------MLQVLDALACAHNQG---IVHRDLKPQNIM 111

Query: 616 L---DEELNPKISDFGMAKIFGGNQDQAD-----TGRVVGT 648
           +       + K+ DFG+  +  G +D        T  V+GT
Sbjct: 112 VSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGT 152

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 51.9 bits (124), Expect = 4e-07
 Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 14/149 (9%)

Query: 489 LGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG+GGFG V        G++   +++  KR+ K  G+ +   +NE  ++ K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKRILEKVNSRFVVSL 65

Query: 543 LGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
                E ++ + L+   M    L   +++ +     D ++       +  GL  L R+  
Sbjct: 66  -AYAYETKDALCLVLTIMNGGDLKFHIYN-MGNPGFDEQRAIFYAAELCCGLEDLQRE-- 121

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMA 630
            RI++RDLK  NILLD+  + +ISD G+A
Sbjct: 122 -RIVYRDLKPENILLDDRGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)

Query: 488 KLGQGGFGPVYWGRLKDGQEIA---VKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG V    +     +A   VK L + AS +   EF+ +      LQH N+++ L
Sbjct: 2   EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR-------GLLYL 596
           G CVE    +L++EY     L + L       +  W +R + +  + R       G+ ++
Sbjct: 62  GQCVEAIPYLLVFEYCELGDLKSYL------SQEQWHRRNSQLLLLQRMACEIAAGVTHM 115

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
           H   +   +H DL   N  L  +L  K+ D+G+
Sbjct: 116 H---KHNFLHSDLALRNCFLTSDLTVKVGDYGI 145

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 52.0 bits (125), Expect = 4e-07
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 29/158 (18%)

Query: 485 LSSKLGQG--GFGPVYWGRLKD-GQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRNL 539
           L + +G+       V+  + K     +AVK+  L   S + L+    E++   +LQH N+
Sbjct: 2   LLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNI 61

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF----------NIIEGI 589
           +  +   +   E  ++   M   S + LL           +  F           I++ +
Sbjct: 62  LPYVTSFIVDSELYVVSPLMAYGSCEDLL-----------KTHFPEGLPELAIAFILKDV 110

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF 627
              L Y+H       IHR +KAS+ILL  +    +S  
Sbjct: 111 LNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGL 145

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 51.6 bits (123), Expect = 4e-07
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 12/166 (7%)

Query: 473 FEELATATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVI 531
           F+     ++ +++   +G+G +G V+     K+G + AVK L        EE   E  ++
Sbjct: 10  FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID-EEIEAEYNIL 68

Query: 532 SKLQ-HRNLVRLLGC-----CVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFN 584
             L  H N+V+  G         G++  L+ E     S+  L+   LK+ ER++      
Sbjct: 69  KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAY 128

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           I+     GL +LH +   + IHRD+K +NILL  E   K+ DFG++
Sbjct: 129 ILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVS 171

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 51.5 bits (123), Expect = 5e-07
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKAS----GQGLEEFMNEVMVISK 533
           NF+L   LG G +G V+  R   G +     A+K L KA+     +  E    E  V+  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           ++    +  L    + + K+ LI +Y+    L   L    ++ER   ++       I   
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHL---SQRERFKEQEVQIYSGEIVLA 117

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           L +LH+   L II+RD+K  NILLD   +  ++DFG++K F
Sbjct: 118 LEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 51.4 bits (123), Expect = 6e-07
 Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 24/161 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHR 537
           +F++   LG G FG V   + K  G+  A+K L K      + ++    E  ++ +L H 
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHP 78

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF--NIIEGISRGLL 594
            +V ++ C  + E ++  + E++    +   LF  L+K       RF  ++ +     L+
Sbjct: 79  FIVNMM-CSFQDENRVYFLLEFV----VGGELFTHLRKA-----GRFPNDVAKFYHAELV 128

Query: 595 ----YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               YLH      II+RDLK  N+LLD + + K++DFG AK
Sbjct: 129 LAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166

Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (121), Expect = 1e-06
 Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +G+G FG V   R +D Q I A+K + KA   S   +   + E  V++++    +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLD-WRKRFNIIEGISRGLLYLHRDSRL 602
                E+  L+  ++    L    F  L++E R D  R RF   E +   L  LH+    
Sbjct: 61  SFQSPEKLYLVLAFINGGEL----FHHLQREGRFDLSRARFYTAE-LLCALENLHK---F 112

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            +I+RDLK  NILLD + +  + DFG+ K+   + D+ +T
Sbjct: 113 NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNT 152

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 44/179 (24%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGL-EEFMNEVMVISKLQHR 537
           + ++   K+G+G +G VY  R    G+ +A+K+   +   +G+    + E+ ++  L   
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES 60

Query: 538 N-LVRLLGCCVEGEEK-------MLIYEYM--------------PNRSLDALLFDPLKKE 575
             +VRLL   VE  E+        L++EY+              P R L A         
Sbjct: 61  IYIVRLL--DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTI------ 112

Query: 576 RLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
                K F  +  + +G+ + H+     ++HRDLK  N+L+D++    KI+D G+ + F
Sbjct: 113 -----KSF--MYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 50.1 bits (119), Expect = 2e-06
 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 16/166 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   R K  G+  A+K L K      +E    + E  V+   +H  L  L  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRL 602
                +    + EY+    L    F  L +ER+  + R RF   E +S  L YLH     
Sbjct: 63  SFQTKDRLCFVMEYVNGGEL----FFHLSRERVFSEDRTRFYGAEIVS-ALDYLHSG--- 114

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +I++RDLK  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 115 KIVYRDLKLENLMLDKDGHIKITDFGLCK--EGITDAATMKTFCGT 158

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 50.5 bits (121), Expect = 2e-06
 Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 37/197 (18%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK-ASGQGL--EEFMNEVMVISKLQHRN 538
           + +   +G+GG G VY        + +A+K++ +  S   L  + F+ E  + + L H  
Sbjct: 4   YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPG 63

Query: 539 LVRLLGCCVEGEEKMLIYEYMP---NRSLDALL-----FDPLKK---ERLDWRKRFNIIE 587
           +V +   C +G+    +Y  MP     +L +LL      + L K   E+       +I  
Sbjct: 64  IVPVYSICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD-QADT---- 642
            I   + Y+H  S+  ++HRDLK  NILL       I D+G A      ++   D     
Sbjct: 121 KICATIEYVH--SK-GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDE 177

Query: 643 -----------GRVVGT 648
                      G++VGT
Sbjct: 178 RNICYSSMTIPGKIVGT 194

Length = 932

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           +N Q    LG G FG V        G+  +   +AVK L + A     E  M+E+ ++S 
Sbjct: 38  DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSH 97

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY 558
           L QH+N+V LLG C  G   ++I EY
Sbjct: 98  LGQHKNIVNLLGACTHGGPVLVITEY 123

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 49.3 bits (118), Expect = 3e-06
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 16/176 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS----GQGLEEFMNEVMVISKLQ 535
           ++F+    +G+G FG V   + KD   I A+K+L K+      Q +     E  ++++  
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQ-VAHVRAERDILAEAD 59

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGL 593
           +  +V+L     + E  + LI EY+P   +  LL   +KK+   +   RF I E I    
Sbjct: 60  NPWVVKLY-YSFQDENYLYLIMEYLPGGDMMTLL---MKKDTFTEEETRFYIAETI---- 111

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           L +    +L  IHRD+K  N+LLD + + K+SDFG+      +        +   L
Sbjct: 112 LAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHAL 167

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 49.4 bits (118), Expect = 3e-06
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 35/182 (19%)

Query: 483 FQLSSKLGQGGFGPVYWGRL--KDGQEIAVKRLSKASGQGLEEFMN---------EVMVI 531
            +    +G G FG V W     +DG+ +A+K++          F N         E+ ++
Sbjct: 2   VEPDRPIGYGAFG-VVWSVTDPRDGKRVALKKMPNV-------FQNLVSCKRVFRELKML 53

Query: 532 SKLQHRNLVRLLGCCVEG-----EEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFN 584
              +H N++  L           EE  ++ E M    L  ++  P   + L  D  K F 
Sbjct: 54  CFFKHDNVLSALDILQPPHIDPFEEIYVVTELM-QSDLHKIIVSP---QPLSSDHVKVF- 108

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
            +  I RGL YLH      I+HRD+K  N+L++     KI DFG+A++   ++ +  T  
Sbjct: 109 -LYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQE 164

Query: 645 VV 646
           VV
Sbjct: 165 VV 166

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 8/147 (5%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +LG+G +G VY    +  G  +A+K  RL     +   + + E+ ++ K     +V   G
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK-FNQIIMELDILHKAVSPYIVDFYG 66

Query: 545 C-CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
              +EG   M + EYM   SLD L    +  E +       I   + +GL +L  +    
Sbjct: 67  AFFIEGAVYMCM-EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HN 123

Query: 604 IIHRDLKASNILLDEELNPKISDFGMA 630
           IIHRD+K +N+L++     K+ DFG++
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVS 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 49.2 bits (117), Expect = 4e-06
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 17/159 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQ--EIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
           +F     LG G FG V     K+     +A+KR  K+     + ++   +E  +++ + H
Sbjct: 31  DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH 90

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI---SRGL 593
              V L G   +     L+ E++    +    F  L++      KRF    G    ++ +
Sbjct: 91  PFCVNLYGSFKDESYLYLVLEFV----IGGEFFTFLRRN-----KRFPNDVGCFYAAQIV 141

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           L       L I++RDLK  N+LLD++   K++DFG AK+
Sbjct: 142 LIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180

Length = 340

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 21/104 (20%)

Query: 557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----RGLLYLHRDSRLRIIHRDLKAS 612
           E+M   SLD +L    KK     R   NI+  IS    RGL YL R+ + +I+HRD+K S
Sbjct: 79  EHMDGGSLDQVL----KKAG---RIPENILGKISIAVLRGLTYL-RE-KHKIMHRDVKPS 129

Query: 613 NILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
           NIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 130 NILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 173

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 48.9 bits (117), Expect = 4e-06
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 31/147 (21%)

Query: 505 GQEIAVKRLSKASGQGLEEFMN---------EVMVISKLQHRNLVRLLGCCV------EG 549
           GQ +A+K+LS+        F N         E++++  + H+N++ LL          E 
Sbjct: 41  GQNVAIKKLSRP-------FQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93

Query: 550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDL 609
           ++  L+ E M     DA L   ++ + LD  +   ++  +  G+ +LH      IIHRDL
Sbjct: 94  QDVYLVMELM-----DANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAG---IIHRDL 144

Query: 610 KASNILLDEELNPKISDFGMAKIFGGN 636
           K SNI++  +   KI DFG+A+  G +
Sbjct: 145 KPSNIVVKSDCTLKILDFGLARTAGTS 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 48.4 bits (115), Expect = 5e-06
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 12/148 (8%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG+GGFG V   ++K+ G+  A K     RL K SG+ +     E++   K+    +V L
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEIL--EKVNSPFIVNL 58

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                      L+   M    L   +++ + +  L+  +  +    I+ G+L+LH    +
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYN-VGERGLEMERVIHYSAQITCGILHLHS---M 114

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
            I++RD+K  N+LLD++ N ++SD G+A
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 48.5 bits (116), Expect = 5e-06
 Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           RGL Y+H  +   ++HRDLK SN+LL+   + KI DFG+A+
Sbjct: 119 RGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 48.4 bits (115), Expect = 6e-06
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 19/163 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKAS----GQGLEEFMNEVMVISK 533
           NF+L   LG G +G V+  R   G +     A+K L KA+     + +E    E  V+  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGIS 590
           ++    +  L    + E K+ LI +Y+    +   L+  D   ++ +    RF   E I 
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEV----RFYSGE-II 115

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
             L +LH+   L I++RD+K  NILLD E +  ++DFG++K F
Sbjct: 116 LALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 48.5 bits (115), Expect = 6e-06
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 17/135 (12%)

Query: 505 GQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV------EGEEKMLIY 556
           G  +AVK+LS+   +    +    E++++  + H+N++ LL          E ++  L+ 
Sbjct: 46  GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105

Query: 557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           E M + +L  ++   L  ER+ +     ++  +  G+ +LH      IIHRDLK SNI++
Sbjct: 106 ELM-DANLCQVIHMELDHERMSY-----LLYQMLCGIKHLHSAG---IIHRDLKPSNIVV 156

Query: 617 DEELNPKISDFGMAK 631
             +   KI DFG+A+
Sbjct: 157 KSDCTLKILDFGLAR 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 48.2 bits (115), Expect = 7e-06
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 15/163 (9%)

Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
           +  +L     +F +   +G+G FG V   R K  +++ A+K LSK       +   F  E
Sbjct: 34  KITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEE 93

Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
             +++      +V+L       ++K L  + EYMP   L  L+ +    E   W  RF  
Sbjct: 94  RDIMAHANSEWIVQL--HYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPE--KW-ARFYT 148

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            E +   L  +H    +  IHRD+K  N+LLD+  + K++DFG
Sbjct: 149 AE-VVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG 187

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 47.7 bits (113), Expect = 7e-06
 Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGLEEFMNEVMVISKLQHR 537
           N F++   +G+G +G V   R K+ +EI A+K+   S+ + +  E  + E+ ++  L+  
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V L        +  L++EY+    L+  L + +       + R  I + I + + + H
Sbjct: 61  NIVELKEAFRRRGKLYLVFEYVEKNMLE--LLEEMPNGVPPEKVRSYIYQLI-KAIHWCH 117

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           ++    I+HRD+K  N+L+      K+ DFG A+
Sbjct: 118 KND---IVHRDIKPENLLISHNDVLKLCDFGFAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 48.5 bits (115), Expect = 7e-06
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 25/149 (16%)

Query: 510 VKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE---YMPNRSLDA 566
           VK  S+A+ Q LE   NE++ + +L H N++++        E++L  E   YM  +  D 
Sbjct: 200 VKAGSRAAIQ-LE---NEILALGRLNHENILKI--------EEILRSEANTYMITQKYDF 247

Query: 567 LLFDPLKKERLDWRKR------FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL 620
            L+  +  E  DW+ R        I++ +   + Y+H     ++IHRD+K  NI L+ + 
Sbjct: 248 DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDG 304

Query: 621 NPKISDFGMAKIFGGNQDQADTGRVVGTL 649
              + DFG A  F   ++  D G  VGT+
Sbjct: 305 KIVLGDFGTAMPFEKEREAFDYGW-VGTV 332

Length = 501

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 47.7 bits (113), Expect = 9e-06
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +G+G +  V   RLK  + I   ++ K       + ++    E  V  +  +   +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 545 CCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYLHRDSRL 602
            C + E ++  + EY+    L   +F   ++ +L +   RF   E IS  L YLH     
Sbjct: 63  SCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALNYLHERG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            II+RDLK  N+LLD E + K++D+GM K
Sbjct: 117 -IIYRDLKLDNVLLDSEGHIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 16/166 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   R K  G+  A+K L K      +E    + E  V+   +H  L  L  
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 62

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRL 602
                +    + EY     L    F  L +ER+  + R RF   E +S  L YLH     
Sbjct: 63  AFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALEYLHSRD-- 115

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 116 -VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 158

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)

Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS--GQGLEEFMNEV 528
           +  +L     ++ +   +G+G FG V   R K  Q++ A+K LSK     +    F  E 
Sbjct: 34  KIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEE 93

Query: 529 MVISKLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             I    +   V  L C  + ++ + ++ EYMP   L  L+ +    E+  W K +    
Sbjct: 94  RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAKFYT--- 148

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
             +  +L L     + +IHRD+K  N+LLD+  + K++DFG
Sbjct: 149 --AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQ- 535
            ++L  +LGQG +G V   R     + + +A+K+++    + +  +  + E+ ++   + 
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60

Query: 536 HRNLVRLLGCCV---EGEEKMLIYEYMPNRSLDALLFD--PLKKERLDWRKRFNIIEGIS 590
           H+N+  L    +       ++ +YE +    L  ++    PL        + F  I  I 
Sbjct: 61  HKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHF---QSF--IYQIL 115

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            GL Y+H  +   ++HRDLK  N+L++ +   KI DFG+A+ F  N  +  
Sbjct: 116 CGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENA 163

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.2 bits (112), Expect = 2e-05
 Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 35/161 (21%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +G+G FG VY  R KD + I A+K LSK      +E + +  V   +  RN+   L   +
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSK------KEIVAKKEVAHTIGERNI---LVRTL 51

Query: 548 EGE---------------EKMLIYEYMPNRSLDALLFDPLKKE-RL-DWRKRFNIIEGIS 590
             E               +  L+ +YM    L    F  L+KE R  + R +F I E + 
Sbjct: 52  LDESPFIVGLKFSFQTDSDLYLVTDYMSGGEL----FWHLQKEGRFSEDRAKFYIAELV- 106

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             L +LH+     I++RDLK  NILLD   +  + DFG++K
Sbjct: 107 LALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 17/137 (12%)

Query: 506 QEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV------EGEEKMLIYE 557
           + +A+K+LS+   +    +    E++++  + H+N++ LL          E ++  L+ E
Sbjct: 43  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME 102

Query: 558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD 617
            M     DA L   ++ E LD  +   ++  +  G+ +LH      IIHRDLK SNI++ 
Sbjct: 103 LM-----DANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVK 153

Query: 618 EELNPKISDFGMAKIFG 634
            +   KI DFG+A+  G
Sbjct: 154 SDCTLKILDFGLARTAG 170

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 15/166 (9%)

Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQHRNLVRLLG 544
           LG+G FG V   + K  G+  A+K L K      +E    + E  V+   +H  L  L  
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 62

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRL 602
                +    + EY     L    F  L +ER+  + R RF   E +S  L YLH  S  
Sbjct: 63  SFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS-ALDYLH--SEK 115

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 116 NVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 159

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNEVMVISKLQH 536
            +F + S +G+G FG V   R K   +I A+K + K+     E    F  E  ++S    
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS 60

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNIIEGISRGL 593
             + +L     + +   L+ EY P   L +LL    D   ++      +F + E +    
Sbjct: 61  PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMA----QFYLAELV---- 112

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L +H   ++  +HRD+K  N+L+D   + K++DFG A
Sbjct: 113 LAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSA 149

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 46.4 bits (110), Expect = 3e-05
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 19/153 (12%)

Query: 483 FQLSSKLGQGGFGPVY----WGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           + + S L  G  G V+     G  +  +++ VK ++     G      E+ ++  + HR 
Sbjct: 94  YNILSSLTPGSEGEVFVCTKHGD-EQRKKVIVKAVTGGKTPG-----REIDILKTISHRA 147

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLH 597
           ++ L+        K  +   MP    D  LF  + +   L   +   I   +   L YLH
Sbjct: 148 IINLIHAY---RWKSTVCMVMPKYKCD--LFTYVDRSGPLPLEQAITIQRRLLEALAYLH 202

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
                 IIHRD+K  NI LDE  N  + DFG A
Sbjct: 203 GRG---IIHRDVKTENIFLDEPENAVLGDFGAA 232

Length = 392

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQHR 537
           +F     LG+G FG V     K   E+ A+K L K        +E  M E  V++     
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP 60

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             +  L  C +  +++  + EY+    L   ++   +  R            I+ GL +L
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYQIQQVGRFKEPHAVFYAAEIAIGLFFL 117

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           H      II+RDLK  N++LD E + KI+DFGM K
Sbjct: 118 HSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 46.0 bits (109), Expect = 4e-05
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 489 LGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQHRNLVRLLG 544
           +G+G +  V    LK  + I A+K + K      E+      E  V     +   +  L 
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH 62

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYLHRDSRL 602
            C + E ++  + E++    L   +F   ++ +L +   RF   E IS  L +LH     
Sbjct: 63  SCFQTESRLFFVIEFVSGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALNFLHERG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            II+RDLK  N+LLD E + K++D+GM K
Sbjct: 117 -IIYRDLKLDNVLLDAEGHIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 12/154 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN---EVMVISKLQH 536
           ++F+    +G+G FG V   + KD G   A+K L KA     E+  +   E  ++ +   
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLY 595
             +V++     +     LI E++P   +  LL   +KK+ L +   +F I E +    L 
Sbjct: 61  AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLL---MKKDTLSEEATQFYIAETV----LA 113

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
           +    +L  IHRD+K  N+LLD + + K+SDFG+
Sbjct: 114 IDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 46.2 bits (109), Expect = 4e-05
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 45/184 (24%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFMN-EVMVISKLQ 535
           +   +++L + +G G FG VY     D  E +A+K++ +       ++ N E++++  L 
Sbjct: 63  SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLN 117

Query: 536 HRNLVRLLGC----CVEGEEKML----IYEYMP-------------NRSLDALLFDPLKK 574
           H N++ L       C +  EK +    + E++P             N +L   L      
Sbjct: 118 HINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSY 177

Query: 575 ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
           +             + R L Y+H  S+  I HRDLK  N+L+D   +  K+ DFG AK  
Sbjct: 178 Q-------------LCRALAYIH--SKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221

Query: 634 GGNQ 637
              Q
Sbjct: 222 LAGQ 225

Length = 440

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 33/172 (19%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +          
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS--------- 52

Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWR-----------KRFNIIEGISR 591
               G+   ++       + D L F  D +    L +             RF   E I  
Sbjct: 53  ---TGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATE-IIL 108

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           GL ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 109 GLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V   + K    I  ++L     +     + + E+ V+ +     
Sbjct: 5   DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L +    +R+       +   + RGL YL  
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLRE 121

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 122 --KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 177

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)

Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +G+G +  V   RLK   +I   ++ K       + ++    E  V  +      +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 545 CCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYLHRDSRL 602
            C +   ++ L+ EY+    L   +F   ++ +L +   RF   E I   L +LH     
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDL---MFHMQRQRKLPEEHARFYAAE-ICIALNFLHERG-- 116

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
            II+RDLK  N+LLD + + K++D+GM K
Sbjct: 117 -IIYRDLKLDNVLLDADGHIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 12/153 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN---EVMVISKLQHR 537
           +F+    +G+G FG V   + KD G   A+K L KA     E+  +   E  ++ +    
Sbjct: 2   DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSL 61

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYL 596
            +V++     +     LI E++P   +  LL   +KK+ L +   +F I E +    L +
Sbjct: 62  WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLL---MKKDTLTEEETQFYIAETV----LAI 114

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
               +L  IHRD+K  N+LLD + + K+SDFG+
Sbjct: 115 DSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGL 147

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 11/134 (8%)

Query: 506 QEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG---EEKMLIYEYMP 560
           + +A+K+LS+   +    +    E++++  + H+N++ LL         EE   +Y  M 
Sbjct: 50  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM- 108

Query: 561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL 620
              +DA L   ++ E LD  +   ++  +  G+ +LH      IIHRDLK SNI++  + 
Sbjct: 109 -ELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC 163

Query: 621 NPKISDFGMAKIFG 634
             KI DFG+A+  G
Sbjct: 164 TLKILDFGLARTAG 177

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 489 LGQGGFGPVYWGRLKDG-QEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGC 545
           +G+G FG     +  +  Q+ A+K  RL K+S   +E+   E ++++K++H N+V     
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVEDSRKEAVLLAKMKHPNIVAFKES 66

Query: 546 CVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
             E +  + ++ EY         L   +K +R        I++   +  L +      R+
Sbjct: 67  -FEADGHLYIVMEYCD----GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV 121

Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIF 633
           +HRD+K+ NI L +    K+ DFG A++ 
Sbjct: 122 LHRDIKSKNIFLTQNGKVKLGDFGSARLL 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 45.1 bits (106), Expect = 1e-04
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 43/198 (21%)

Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE-----FMN 526
           ++++  +  N +++  K+G G FG V+  + K  QE    +    S +GL+E      + 
Sbjct: 4   KYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWK--AISYRGLKEREKSQLVI 61

Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           EV V+ +L+H+N+VR +   +    + L   Y+     DA     L +      K F  I
Sbjct: 62  EVNVMRELKHKNIVRYIDRFLNKANQKL---YILMEFCDA---GDLSRNIQKCYKMFGKI 115

Query: 587 E-----GISRGLL----YLHR----DSRLRIIHRDLKASNILLD-------------EEL 620
           E      I+R LL    Y H      +  R++HRDLK  NI L                L
Sbjct: 116 EEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL 175

Query: 621 N----PKISDFGMAKIFG 634
           N     KI DFG++K  G
Sbjct: 176 NGRPIAKIGDFGLSKNIG 193

Length = 1021

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 1e-04
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 18/158 (11%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQG---LEEFMNEVMVISKLQHRN 538
           F+    LG+G  G V+  RLK  G+  A+K L K        ++  + E  +++ L H  
Sbjct: 3   FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPF 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR-----KRFNIIEGISRGL 593
           L  L           L+ +Y P   L  LL     + +          RF   E +   L
Sbjct: 63  LPTLYASFQTETYLCLVMDYCPGGELFRLL-----QRQPGKCLSEEVARFYAAE-VLLAL 116

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            YLH    L I++RDLK  NILL E  +  +SDF ++K
Sbjct: 117 EYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSK 151

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 59/215 (27%), Positives = 83/215 (38%), Gaps = 70/215 (32%)

Query: 484 QLSSKLGQGGFGPVYW------GRLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           +L   LG+G FG V         +    + +AVK L + A+    +  M E+ ++  +  
Sbjct: 10  KLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGH 69

Query: 536 HRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDP---------------LK 573
           H N+V LLG C + G   M+I EY    +L   L      F P                K
Sbjct: 70  HLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGK 129

Query: 574 KERLDWR--------------KRFNIIEGIS-----------------------RGLLYL 596
           K+RLD                K  + +E                          RG+ +L
Sbjct: 130 KQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFL 189

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              SR + IHRDL A NILL E    KI DFG+A+
Sbjct: 190 --ASR-KCIHRDLAARNILLSENNVVKICDFGLAR 221

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 41/176 (23%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S      LV    
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------LVSTGD 55

Query: 545 C----CVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWR-----------KRFNIIE 587
           C    C       + Y +    + D L F  D +    L +             RF   E
Sbjct: 56  CPFIVC-------MSYAF---HTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAE 105

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            I  GL ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 106 -IILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    I  ++L     +     + + E+ V+ +     
Sbjct: 5   DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 121

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 122 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 177

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 23/112 (20%)

Query: 527 EVMVISKLQHRNLVRLLG--------CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD 578
           E  ++  + H ++++L G        C +    K  +Y Y+  +   A+  D L  ER  
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAIC-DILAIER-- 189

Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
                     + R + YLH +   RIIHRD+KA NI ++   +  + DFG A
Sbjct: 190 ---------SVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229

Length = 391

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 42.9 bits (102), Expect = 3e-04
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 16/166 (9%)

Query: 474 EELATATNNFQLSSKLG--QGGFGPVYWGRLKDGQEIAVKRLSKASG-QGLEEFMNEVMV 530
            EL     N ++  KL    G FG V   + K  Q++ V+++ KA     +E  ++++M 
Sbjct: 7   SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMK 66

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGI 589
                + N ++L       +  +LI +Y+     D  LFD LKKE +L   +   II  +
Sbjct: 67  ----DNPNFIKLYYSVTTLKGHVLIMDYIK----DGDLFDLLKKEGKLSEAEVKKIIRQL 118

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFG 634
              L  LH+     IIH D+K  N+L D   +   + D+G+ KI G
Sbjct: 119 VEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161

Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.3 bits (102), Expect = 3e-04
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
            +F     +G+G FG V   + KD G+  A+K L K+       L     E  V+++   
Sbjct: 1   EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS 60

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLL 594
             +V L     + +   LI E++P   L  +L  +D   ++      RF + E +    L
Sbjct: 61  PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDV----TRFYMAECV----L 112

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            +    +L  IHRD+K  NIL+D   + K+SDFG++  F    D A
Sbjct: 113 AIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 43.2 bits (102), Expect = 4e-04
 Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 38/179 (21%)

Query: 482 NFQLSSKLGQGGFGPVYWG-----RLKDGQEIAVKRLSKASGQG-LEEFMNEVM------ 529
           +F L  KLG+G FG VY       + K   +  +K   KA+  G +E +MNE +      
Sbjct: 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLK---KATEYGAVEIWMNERVRRACPN 189

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD---PLKKERLDWRK----- 581
             +   +  L  +     + +E  L++ Y    +L  L+     P   E     K     
Sbjct: 190 SCADFVYGFLEPVSS--KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLP 247

Query: 582 ----RFN-IIEGISRGLLY----LHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMA 630
               R N II+ I R +L+    LH      I+HRD+K  NI+  E     KI D G A
Sbjct: 248 KGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGAA 303

Length = 566

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 25/161 (15%)

Query: 489 LGQGGFGPVYWGRLKD---------GQEIAVKRLSKASGQGLEE----FMNEVMVISKLQ 535
           LG+G    +Y G L             E  +K + K       +    F     ++ ++ 
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H+++V L G CV   E +++ E++    LD  LF   K + L    +F + + ++  L Y
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLD--LFMHRKSDVLTTPWKFKVAKQLASALSY 120

Query: 596 LHRDSRLRIIHRDLKASNILL-----DEELNP--KISDFGM 629
           L  D  L  +H ++   NILL     D E  P  K+SD G+
Sbjct: 121 L-EDKDL--VHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|224632 COG1718, RIO1, Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 30/157 (19%)

Query: 497 VYWGRLKDGQEIAVK--RLSKASGQGLEE-------FMNEVMVISKLQH-------RNLV 540
           VY     DG+ +AVK  R S +  + +         F N      KL         RNL 
Sbjct: 64  VYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLK 123

Query: 541 RLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN-IIEGISRGL 593
           R     V           +L+ E++ +  L A     +  E  +    +  ++E + R  
Sbjct: 124 RAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRR-- 181

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           LY        ++H DL   NIL+ +   P I D   A
Sbjct: 182 LY----KEAGLVHGDLSEYNILVHDG-EPYIIDVSQA 213

Length = 268

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 42.5 bits (100), Expect = 5e-04
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 12/152 (7%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS---GQGLEEFMNEVMVISKLQHRN 538
           F     +G G FG V   R  D   + A+K L KA             E  ++++  +  
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEW 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L     + +    + +Y+P   + +LL    + +E L    RF I E ++  +  +H
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDL---ARFYIAE-LTCAIESVH 118

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
           +   +  IHRD+K  NIL+D + + K++DFG+
Sbjct: 119 K---MGFIHRDIKPDNILIDRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 42.2 bits (99), Expect = 6e-04
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 481 NNFQLSSKLGQGGFGPVY----WGRLKD--GQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           N       LG G FG V     +G  K      +AVK L   A     E  M+E+ V+S 
Sbjct: 35  NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 94

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY 558
           L  H N+V LLG C  G   ++I EY
Sbjct: 95  LGNHINIVNLLGACTVGGPTLVITEY 120

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 42.1 bits (99), Expect = 7e-04
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           R L Y+H  +   + HRDLK  NIL + +   KI DFG+A++
Sbjct: 114 RALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARV 152

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)

Query: 484 QLSSKLGQG--GFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN 538
           +L  ++G+G      VY  R    G  + V+   L   + + L+   NEV++    +H N
Sbjct: 1   ELQVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPN 60

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++        G    +I  +M   S ++LL  + P   E +      NI+ G  RGL YL
Sbjct: 61  IMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP---EGMSEALIGNILFGALRGLNYL 117

Query: 597 HRDSRLRIIHRDLKASNILLDEE 619
           H++     IHR++KAS+IL+  +
Sbjct: 118 HQNG---YIHRNIKASHILISGD 137

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|238074 cd00129, PAN_APPLE, PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 337 EDGFSKLNKMKVPDFT---EWTSPATEDECREQCLKN---CSCIAYAFDGGIGCMVWRSI 390
            D F K     +       + T   T DEC  +C KN    SC A+ F       +W   
Sbjct: 1   VDEFCKSAGTTLIKIALKIKTTKANTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPF 60

Query: 391 NLIDIQRLPFG-GTDLYIRV 409
           N +   R  F  G DLY   
Sbjct: 61  NSMSGVRKEFSHGFDLYENK 80

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. Length = 80

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 38/159 (23%)

Query: 487 SKLGQGGFGPVYWGRLK-----------------------DGQEIAV--KRLSKASGQGL 521
           + LGQG    +Y GRL+                       +G+E+ V  K L  +     
Sbjct: 1   AHLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIA 60

Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL---- 577
             F     ++S++ H +L  + G CV G E +++ E++ +  LD      L+KE+     
Sbjct: 61  LAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVC----LRKEKGRVPV 116

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
            W  +  + + ++  L YL   +   ++H ++ A NILL
Sbjct: 117 AW--KITVAQQLASALSYLEDKN---LVHGNVCAKNILL 150

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE 619
           P +  D L   PL  E L     F +    +RG+ +L   SR + IHRDL A NILL E 
Sbjct: 159 PPQETDDLWKSPLTMEDLICYS-FQV----ARGMEFLA--SR-KCIHRDLAARNILLSEN 210

Query: 620 LNPKISDFGMAK 631
              KI DFG+A+
Sbjct: 211 NVVKICDFGLAR 222

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 26/113 (23%)

Query: 526 NEVMVISKLQHRNLVRLLGCC------VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW 579
            E  +++K       R  G        V+ +  +++ EY+    L   L           
Sbjct: 48  REARILAKA------REAGVPVPIVYDVDPDNGLIVMEYIEGELLKDAL----------E 91

Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
             R +++  + R +  LH+     I+H DL  SNI+L         DFG+ + 
Sbjct: 92  EARPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGG-RIYFIDFGLGEF 140

Length = 204

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 12/152 (7%)

Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNL 539
           + Q    LG G  G VY    L   + +AVK +       L+ + M+E+ ++ K     +
Sbjct: 2   DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI 61

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +   G         +  E+M   SLD     P   E +  R    I   + +GL YL   
Sbjct: 62  IGFYGAFFVENRISICTEFMDGGSLDVYRKIP---EHVLGR----IAVAVVKGLTYLWS- 113

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             L+I+HRD+K SN+L++     K+ DFG++ 
Sbjct: 114 --LKILHRDVKPSNMLVNTRGQVKLCDFGVST 143

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 40.1 bits (93), Expect = 0.003
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 580 RKRFNIIEGISRGLLY-LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           ++  N+I+G+ R +L  L +  R+ I+HRD+K  N+L+  +   KI DFG A
Sbjct: 305 KRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAA 356

Length = 507

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
           +  +L     ++++   +G+G FG V   R K  +++ A+K LSK       +   F  E
Sbjct: 34  KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 93

Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++      +V+L     +     ++ EYMP   L  L+ +    E+  W  RF   E
Sbjct: 94  RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 150

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            +    L L     +  IHRD+K  N+LLD+  + K++DFG
Sbjct: 151 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           LL +H      +IHRD+K++NILL      K+ DFG +K++       D GR
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMY-AATVSDDVGR 203

Length = 496

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	649
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.97
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.96
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.95
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.95
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.95
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.95
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.94
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.94
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.94
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.94
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.94
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.93
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.93
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.93
KOG0198	313	consensus MEKK and related serine/threonine protei	99.93
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.93
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.93
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.93
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.93
KOG0605	550	consensus NDR and related serine/threonine kinases	99.92
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.92
KOG0578	550	consensus p21-activated serine/threonine protein k	99.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.92
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.92
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.92
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.91
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.91
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.91
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.91
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.91
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.91
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.91
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.91
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.91
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.91
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.91
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.91
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.91
PTZ00267	478	NIMA-related protein kinase; Provisional	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.91
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.91
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.9
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.9
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.9
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.9
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.9
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.9
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.9
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.9
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.9
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.9
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.9
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.9
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.9
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.9
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.9
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.9
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.9
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.9
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.9
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.9
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.9
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.9
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.9
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.89
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.89
KOG0589	426	consensus Serine/threonine protein kinase [General	99.89
PTZ00283	496	serine/threonine protein kinase; Provisional	99.89
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
PHA02988	283	hypothetical protein; Provisional	99.89
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.89
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.89
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.89
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.89
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.89
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.89
PHA03211	461	serine/threonine kinase US3; Provisional	99.89
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.89
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.89
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.89
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.89
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.89
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.89
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.89
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.89
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.89
KOG0586	596	consensus Serine/threonine protein kinase [General	99.88
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.88
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.88
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.88
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.88
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.88
KOG0610	459	consensus Putative serine/threonine protein kinase	99.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.88
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.88
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.88
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.88
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.88
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.88
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.88
KOG0584	632	consensus Serine/threonine protein kinase [General	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.88
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.88
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.88
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.88
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.88
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.88
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.88
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.88
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.88
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.88
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.88
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.88
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.88
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.88
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.88
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.87
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.87
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.87
PHA03209	357	serine/threonine kinase US3; Provisional	99.87
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.87
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.87
PHA03207	392	serine/threonine kinase US3; Provisional	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.87
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.87
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.87
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.87
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.87
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.87
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.87
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.87
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.87
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.87
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.87
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.87
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.87
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.87
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.87
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.87
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.87
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.87
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.87
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.87
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.87
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.87
PTZ00036	440	glycogen synthase kinase; Provisional	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.87
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.87
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.87
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.87
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.87
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.87
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.87
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.87
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.87
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.86
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.86
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.86
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.86
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.86
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.86
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.86
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.86
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.86
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.86
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.86
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.86
PRK09188	365	serine/threonine protein kinase; Provisional	99.86
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.86
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.86
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.86
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.86
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.86
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.86
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.86
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.86
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.86
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.86
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.86
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.86
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.86
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.86
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.86
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.86
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.86
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.86
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.86
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.86
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.86
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.86
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.86
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.86
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.85
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.85
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.85
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.85
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.85
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.85
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.85
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.85
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.85
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.85
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.85
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.85
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.85
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.85
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.85
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.85
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.85
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.85
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.85
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.84
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.84
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.84
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.84
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.84
PHA03210	501	serine/threonine kinase US3; Provisional	99.84
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.84
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.84
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
PLN00009	294	cyclin-dependent kinase A; Provisional	99.84
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.84
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.84
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.84
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.84
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.84
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.84
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.84
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.84
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.84
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.84
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.83
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.83
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.83
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.83
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.83
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.83
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.83
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.83
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.82
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.82
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.82
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.82
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.82
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.82
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.82
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.82
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.82
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.82
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.82
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.81
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.81
PHA02882	294	putative serine/threonine kinase; Provisional	99.81
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.81
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.81
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.81
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.81
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.81
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.81
KOG1152	772	consensus Signal transduction serine/threonine kin	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.81
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.8
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.8
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.8
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.8
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.8
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.8
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.8
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.79
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.79
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.79
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.78
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.78
PRK10345	210	hypothetical protein; Provisional	99.78
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.78
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.78
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.77
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.77
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.76
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.75
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.74
PRK14879	211	serine/threonine protein kinase; Provisional	99.73
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.73
smart00090	237	RIO RIO-like kinase.	99.73
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.73
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.73
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.72
PRK12274	218	serine/threonine protein kinase; Provisional	99.72
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.72
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.72
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.72
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.71
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.71
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.7
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.7
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.67
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.67
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.66
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.66
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.65
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.65
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.64
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.6
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.59
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.59
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.59
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.58
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.56
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.51
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.47
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.41
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.41
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.33
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.28
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.19
PLN00181	793	protein SPA1-RELATED; Provisional	99.19
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.18
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.17
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.1
KOG3087	229	consensus Serine/threonine protein kinase [General	99.07
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.01
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.01
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.95
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.87
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.82
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.82
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.79
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.76
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.67
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.62
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.61
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.57
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.53
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.52
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.51
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.47
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.44
PRK09902	216	hypothetical protein; Provisional	98.44
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.36
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.34
KOG1243	690	consensus Protein kinase [General function predict	98.32
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.3
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.26
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.21
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.21
PF01636	239	APH: Phosphotransferase enzyme family This family	98.2
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.12
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.12
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.11
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.06
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.05
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.93
PLN02876	822	acyl-CoA dehydrogenase	97.92
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.76
PRK10593	297	hypothetical protein; Provisional	97.75
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.74
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.66
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.58
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.55
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.49
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.48
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.45
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.42
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.1
PRK05231	319	homoserine kinase; Provisional	97.06
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.93
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.81
PLN02236	344	choline kinase	96.75
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.74
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.32
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.27
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.16
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.07
PLN02756	418	S-methyl-5-thioribose kinase	95.89
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.78
COG2334	331	Putative homoserine kinase type II (protein kinase	95.69
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.57
KOG2270	520	consensus Serine/threonine protein kinase involved	95.45
PRK12396	409	5-methylribose kinase; Reviewed	95.29
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.18
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.13
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.93

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-38  Score=333.80  Aligned_cols=167  Identities=54%  Similarity=0.906  Sum_probs=154.0

Q ss_pred             CCCCCCHHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEE
Q 006347          467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC  546 (649)
Q Consensus       467 ~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~  546 (649)
                      ....|++.+++.||++|+..+.||+|+||.||+|.+++|+.||||++.....+..++|.+|+.++.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56679999999999999999999999999999999999999999998764432167799999999999999999999999


Q ss_pred             EeCC-eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          547 VEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       547 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      .+.+ +++||||||++|+|.++|+..... +++|..|++||.++|+||+|||+.+.++||||||||+|||||+++++||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999875433 89999999999999999999999999999999999999999999999999


Q ss_pred             ecCCceeeC
Q 006347          626 DFGMAKIFG  634 (649)
Q Consensus       626 DFGla~~~~  634 (649)
                      |||||+...
T Consensus       220 DFGLa~~~~  228 (361)
T KOG1187|consen  220 DFGLAKLGP  228 (361)
T ss_pred             CccCcccCC
Confidence            999997653

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.2e-31  Score=272.69  Aligned_cols=161  Identities=32%  Similarity=0.572  Sum_probs=140.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..+|...++||+|+||+||+|++. ++.+||||.+.+.  .....+-+..|+.+|+.++|||||+|+.++.+++..+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            356778889999999999999987 6899999999765  4456677889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC------CceEEEecCCc
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE------LNPKISDFGMA  630 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~------~~~Ki~DFGla  630 (649)
                      |||.+|+|.+||+.   .+.+++.....++.|+|.||++||+++   ||||||||+||||+..      -.+||+|||+|
T Consensus        89 EyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            99999999999954   457999999999999999999999998   9999999999999865      45899999999


Q ss_pred             eeeCCCCCccccCceeecC
Q 006347          631 KIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       631 ~~~~~~~~~~~~~~~~GT~  649 (649)
                      |.+....   ...++.|||
T Consensus       163 R~L~~~~---~a~tlcGSp  178 (429)
T KOG0595|consen  163 RFLQPGS---MAETLCGSP  178 (429)
T ss_pred             hhCCchh---HHHHhhCCc
Confidence            9986433   223466664

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=9.6e-30  Score=268.35  Aligned_cols=159  Identities=36%  Similarity=0.603  Sum_probs=136.5

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccc--cHHHHHHHHHHHhcCCCCCccceEEEEEeCC-eEEEEEecCCCC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--GLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-EKMLIYEYMPNR  562 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~g  562 (649)
                      .+.||+|+||+||+|.++....||||++......  ..++|.+|+.++.+++|||||+++|+|.+.. ...||||||++|
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            3569999999999999994444999999754322  2569999999999999999999999999988 799999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCCCCCccc
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGGNQDQAD  641 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~~~~~~~  641 (649)
                      +|.++|++. .+..+++..+++||.+||+||.|||++..  ||||||||+|||++.+. ++||+|||+++......  ..
T Consensus       126 sL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~  200 (362)
T KOG0192|consen  126 SLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS  200 (362)
T ss_pred             cHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence            999999764 46789999999999999999999999864  99999999999999997 99999999999875432  22


Q ss_pred             cCceeecC
Q 006347          642 TGRVVGTL  649 (649)
Q Consensus       642 ~~~~~GT~  649 (649)
                      .+...||+
T Consensus       201 ~~~~~GT~  208 (362)
T KOG0192|consen  201 MTSVAGTY  208 (362)
T ss_pred             ccCCCCCc
Confidence            22356664

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.3e-29  Score=257.45  Aligned_cols=160  Identities=29%  Similarity=0.458  Sum_probs=136.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-------cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-------GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      +.|-+.+.||+|+||.|-+|... +|+.||||.+++....       ......+|+++|++|+|||||++++++...+..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            45677899999999999999865 7999999999764211       122346999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCC
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGM  629 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGl  629 (649)
                      ||||||+++|+|.+++-   .++.+.+..-..+++|++.|+.|||+.+   |+||||||+|||+..+   ..+||+||||
T Consensus       252 YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             EEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccch
Confidence            99999999999999984   3456777777889999999999999998   9999999999999765   8899999999


Q ss_pred             ceeeCCCCCccccCceeecC
Q 006347          630 AKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       630 a~~~~~~~~~~~~~~~~GT~  649 (649)
                      |+..+..+   .+.+..|||
T Consensus       326 AK~~g~~s---fm~TlCGTp  342 (475)
T KOG0615|consen  326 AKVSGEGS---FMKTLCGTP  342 (475)
T ss_pred             hhccccce---ehhhhcCCc
Confidence            99986322   355688886

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.5e-29  Score=266.35  Aligned_cols=161  Identities=32%  Similarity=0.494  Sum_probs=147.8

Q ss_pred             cCcccceeeccCCcEEEEEEEe-cCCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..|...+.||+|||++||+++. ..|+.||+|++.+.   .....+...+||++.++|+|||||+++++|.+.++.|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5688889999999999999998 78999999999763   3456778999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+|++++|..+++   +.+++++.++..+..||+.||.|||+.+   |||||||..|++|++++++||+|||||..+..+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999999995   4577999999999999999999999988   999999999999999999999999999999877


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      ..+..|  +.|||
T Consensus       172 ~Erk~T--lCGTP  182 (592)
T KOG0575|consen  172 GERKKT--LCGTP  182 (592)
T ss_pred             ccccce--ecCCC
Confidence            666665  89996

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=264.85  Aligned_cols=152  Identities=36%  Similarity=0.647  Sum_probs=137.7

Q ss_pred             cccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      ++..++||+|-||.|+.|.++....||||.++.. ....+.|.+|+.+|++|+|+|||+++|+|..+++.+||||||+.|
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            4456899999999999999998789999999653 345689999999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      +|.+||++ .....+...+.+.++.|||+||+||++++   +|||||.++|||++++..+||+||||||.+..++..
T Consensus       287 sLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~  359 (468)
T KOG0197|consen  287 SLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT  359 (468)
T ss_pred             cHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence            99999976 24567899999999999999999999988   999999999999999999999999999977665543

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.96  E-value=1.8e-30  Score=229.38  Aligned_cols=111  Identities=46%  Similarity=0.768  Sum_probs=81.4

Q ss_pred             CCcEEEEecCCCCCCCC--cceEEEeeCCcEEEEcCCceEEEEe-cCcccccccccceeecccCeEEeeCCCCceEeeec
Q 006347           69 EKAVIWVANRDNPLKDS--SGIITISEDGNLVLVNGQKEVLWSS-NVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF  145 (649)
Q Consensus        69 ~~~~vW~Anr~~pv~~~--~~~l~~~~~G~L~l~~~~~~~~Wss-~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSF  145 (649)
                      ++||||+|||+.|+..+  ..+|.|+.||+|+|++..++++|++ ++.+.+..+..|+|+|+|||||++. .+.+|||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~-~~~~lW~Sf   79 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS-SGNVLWQSF   79 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET-TSEEEEEST
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee-cceEEEeec
Confidence            37999999999999543  3889999999999999999999999 5553222478999999999999995 688999999


Q ss_pred             CCCcccccCCCcccccccCCceeEEEEcccCCCCC
Q 006347          146 QEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPS  180 (649)
Q Consensus       146 D~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps  180 (649)
                      ||||||+||||+|+.+..++.+..++||++.+|||
T Consensus        80 ~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   80 DYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             TSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999999988887767899999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.2e-28  Score=254.24  Aligned_cols=159  Identities=29%  Similarity=0.475  Sum_probs=138.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  556 (649)
                      .|..+++||+|.||.|||++.. +|+.||+|++....  +....-..+||.+|++|+||||++|.+...+.  ...|||+
T Consensus       118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVF  197 (560)
T KOG0600|consen  118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVF  197 (560)
T ss_pred             HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEE
Confidence            4666789999999999999854 79999999997543  34456677999999999999999999999987  6899999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |||++ +|..++..  ..-.++..++..++.|++.||+|+|..+   |+|||||.+|||||.++.+||+|||||+++...
T Consensus       198 eYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  198 EYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             ecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            99976 78777743  2346899999999999999999999998   999999999999999999999999999999888


Q ss_pred             CCccccCcee
Q 006347          637 QDQADTGRVV  646 (649)
Q Consensus       637 ~~~~~~~~~~  646 (649)
                      +....|++++
T Consensus       272 ~~~~~T~rVv  281 (560)
T KOG0600|consen  272 GSAPYTSRVV  281 (560)
T ss_pred             CCcccccceE
Confidence            8777777654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-28  Score=252.02  Aligned_cols=159  Identities=35%  Similarity=0.548  Sum_probs=139.6

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhc--CCCCCccceEEEEEeCC----eEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK--LQHRNLVRLLGCCVEGE----EKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV  555 (649)
                      ...+.+.+|+|+||.||||.+. ++.||||++.   .++.+.|.+|-.+...  ++|+||+++++.-..+.    +.+||
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            3455679999999999999998 5999999985   4566788888877665  47999999999977665    78999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD------SRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      +||.++|+|.+||.    ...++|.+..+|+..+++||+|||+.      .+++|+|||||.+|||+.+|+++.|+||||
T Consensus       287 t~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             eeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            99999999999994    46799999999999999999999975      456899999999999999999999999999


Q ss_pred             ceeeCCCCCccccCceeec
Q 006347          630 AKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       630 a~~~~~~~~~~~~~~~~GT  648 (649)
                      |.++.....+..+..-+||
T Consensus       363 Al~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             eEEecCCCCCcchhhhhhh
Confidence            9999887777777667887

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.95  E-value=2.7e-28  Score=246.31  Aligned_cols=154  Identities=32%  Similarity=0.434  Sum_probs=135.1

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-eEEEEEecCCCC
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-EKMLIYEYMPNR  562 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~g  562 (649)
                      .+.||+|..|+|||+.++ +++.+|+|.+... .+...+++.+|++++.+.+||+||+++|.|.... +..|+||||.+|
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG  163 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG  163 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence            478999999999999987 6889999999543 3455689999999999999999999999999998 599999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCcccc
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT  642 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~  642 (649)
                      ||++++..   .+.+++...-+|+.+|++||.|||+..  .||||||||+|||++..+.+||+|||.++.+.+.    ..
T Consensus       164 SLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a  234 (364)
T KOG0581|consen  164 SLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IA  234 (364)
T ss_pred             CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hc
Confidence            99999953   356899999999999999999999732  3999999999999999999999999999998554    23


Q ss_pred             Cceeec
Q 006347          643 GRVVGT  648 (649)
Q Consensus       643 ~~~~GT  648 (649)
                      ++.+||
T Consensus       235 ~tfvGT  240 (364)
T KOG0581|consen  235 NTFVGT  240 (364)
T ss_pred             cccccc
Confidence            346776

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.95  E-value=2.9e-28  Score=246.01  Aligned_cols=162  Identities=31%  Similarity=0.432  Sum_probs=143.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||+||.++.. +++.+|+|.+++..   ..+.+..+.|..+|.+++||.||+++-.+.+.+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            457999999999999999999876 68899999997642   34567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +||+.||.|..+|.   ++..+++.....++.+|+.||.|||+.+   ||||||||+|||||++|++||+||||++....
T Consensus       104 ld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            99999999999993   4567889988889999999999999998   99999999999999999999999999997644


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      ...  .+.++.||+
T Consensus       178 ~~~--~t~tfcGT~  189 (357)
T KOG0598|consen  178 DGD--ATRTFCGTP  189 (357)
T ss_pred             CCC--ccccccCCc
Confidence            433  344588885

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.95  E-value=4.5e-28  Score=262.03  Aligned_cols=166  Identities=31%  Similarity=0.569  Sum_probs=143.9

Q ss_pred             CCCHHHHHHHhcC---------cccceeeccCCcEEEEEEEec----CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCC
Q 006347          470 LFQFEELATATNN---------FQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQ  535 (649)
Q Consensus       470 ~~~~~~l~~~~~~---------f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~  535 (649)
                      .++||+.-.|...         .++.+.||.|.||.|++|.++    ....||||.|+.. .++.+++|+.|+.||+++.
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            4556655444443         355678999999999999987    2357999999754 4567889999999999999


Q ss_pred             CCCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       536 H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                      ||||++|.|+.......+||.|||+||+|+.||+.+  ...+++.++.-++++||.||.||.+.+   +|||||.++|||
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~--DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNIL  763 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQN--DGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNIL  763 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhc--CCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhhee
Confidence            999999999999999999999999999999999763  455999999999999999999999887   999999999999


Q ss_pred             EcCCCceEEEecCCceeeCCCCCcc
Q 006347          616 LDEELNPKISDFGMAKIFGGNQDQA  640 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~~~~~~~  640 (649)
                      ++.+..+||+||||+|.+.++....
T Consensus       764 VNsnLvCKVsDFGLSRvledd~~~~  788 (996)
T KOG0196|consen  764 VNSNLVCKVSDFGLSRVLEDDPEAA  788 (996)
T ss_pred             eccceEEEeccccceeecccCCCcc
Confidence            9999999999999999997666433

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-27  Score=249.22  Aligned_cols=148  Identities=32%  Similarity=0.568  Sum_probs=131.7

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ...+.++||+|.||.|..+....+..||||+++.... ...++|.+|+++|.+++|||||+|+|+|..++..++|+|||+
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE  618 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME  618 (807)
T ss_pred             heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence            3455689999999999999999889999999986544 345899999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|+|.+||..+.. ..+.-....+|+.|||.||+||.+..   +|||||.++|+|+|.++++||+|||++|-+
T Consensus       619 nGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  619 NGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNL  687 (807)
T ss_pred             cCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCccccccc
Confidence            9999999965321 22455667789999999999999876   999999999999999999999999999954

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=2.2e-27  Score=261.77  Aligned_cols=153  Identities=33%  Similarity=0.577  Sum_probs=135.3

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGE  550 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  550 (649)
                      ..+.+....++||+|+||+||+|+..      +.+.||||.++..... ..++|++|+++++.++|||||+|+|+|.+++
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            33445566789999999999999854      3457999999876554 7889999999999999999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCC-------C----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC
Q 006347          551 EKMLIYEYMPNRSLDALLFDPL-------K----KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE  619 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~  619 (649)
                      ..++|+|||..|+|.+||+.+.       .    ..+|+..+.+.||.|||.||+||-++.   +|||||..+|+|+.++
T Consensus       563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGEN  639 (774)
T ss_pred             eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccc
Confidence            9999999999999999997321       1    234889999999999999999999887   9999999999999999


Q ss_pred             CceEEEecCCceee
Q 006347          620 LNPKISDFGMAKIF  633 (649)
Q Consensus       620 ~~~Ki~DFGla~~~  633 (649)
                      ..+||+||||+|-+
T Consensus       640 l~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  640 LVVKISDFGLSRDI  653 (774)
T ss_pred             eEEEecccccchhh
Confidence            99999999999965

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.4e-28  Score=238.37  Aligned_cols=166  Identities=25%  Similarity=0.444  Sum_probs=140.9

Q ss_pred             CcccceeeccCCcEEEEEEEe-cCCcEEEEEEecc--cccccHHHHHHHHHHHhcCCCCCccceEE-EEEeCCe-EEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLG-CCVEGEE-KMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g-~~~~~~~-~~lV~  556 (649)
                      +|.+.++||+|.||+|||+.. .+|..+|.|.+.-  ...+..+....|+.+|++|+|||||++++ -+.++.+ .+|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            477788999999999999974 5899999998863  24456788999999999999999999999 4555555 78999


Q ss_pred             ecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDS-RLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+..|+|..++... .+++.+++..++++..|+++||.++|..= +..|+||||||.||+|+.++.+|++||||+|.+.
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence            999999999998653 23567899999999999999999999831 2349999999999999999999999999999997


Q ss_pred             CCCCccccCceeecC
Q 006347          635 GNQDQADTGRVVGTL  649 (649)
Q Consensus       635 ~~~~~~~~~~~~GT~  649 (649)
                      ..+..+  .+.+|||
T Consensus       180 s~~tfA--~S~VGTP  192 (375)
T KOG0591|consen  180 SKTTFA--HSLVGTP  192 (375)
T ss_pred             chhHHH--HhhcCCC
Confidence            665443  4589996

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.94  E-value=4.1e-27  Score=246.66  Aligned_cols=156  Identities=34%  Similarity=0.483  Sum_probs=138.3

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      +...++|...+.||+|+|.+|++|+.. +++++|||++.+.   .+...+-...|-.+|.+| .||.|++|+-.|.+...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            334467888999999999999999866 6899999999763   234456677899999999 89999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      +|+|+||+++|+|.++|.+   -+.++......++.+|+.||+|||..+   ||||||||+|||||+|+++||+|||-|+
T Consensus       149 LYFvLe~A~nGdll~~i~K---~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK  222 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKK---YGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK  222 (604)
T ss_pred             eEEEEEecCCCcHHHHHHH---hCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence            9999999999999999954   467899888999999999999999998   9999999999999999999999999999


Q ss_pred             eeCCCCC
Q 006347          632 IFGGNQD  638 (649)
Q Consensus       632 ~~~~~~~  638 (649)
                      ++.+.+.
T Consensus       223 ~l~~~~~  229 (604)
T KOG0592|consen  223 ILSPSQK  229 (604)
T ss_pred             cCChhhc
Confidence            9865443

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=7e-27  Score=225.38  Aligned_cols=150  Identities=29%  Similarity=0.531  Sum_probs=133.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|...++||+|.||.||+|... +|+.||||+++....  .-.....+|+..|+.++|+||+.|++++.+.+..-||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            4666789999999999999865 799999999975422  2245678999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+ .+|...+++  +...++..+...++.++.+||+|||++.   |+||||||.|+|+++++.+||+||||||.++...
T Consensus        83 m~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   83 MP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             cc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            95 589999976  4567899999999999999999999988   9999999999999999999999999999997543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.94  E-value=1e-26  Score=227.31  Aligned_cols=158  Identities=35%  Similarity=0.447  Sum_probs=140.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .+|...+.||.|+||+|..++.+ +|.-+|+|++++..   -.+.+...+|..+|+.+.||++++|++.+.+.+..+|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            35677789999999999999977 68899999997643   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||.++|.|.++|++   .+.++......+|.+|+.||+|||+.+   |++|||||+|||||.+|.+||+|||+|+.+.+.
T Consensus       124 eyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  124 EYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             eccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            99999999999954   456889999999999999999999988   999999999999999999999999999998544


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                           |-++.|||
T Consensus       198 -----T~TlCGTP  205 (355)
T KOG0616|consen  198 -----TWTLCGTP  205 (355)
T ss_pred             -----EEEecCCc
Confidence                 34578885

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=2.9e-26  Score=204.09  Aligned_cols=115  Identities=43%  Similarity=0.734  Sum_probs=101.4

Q ss_pred             CCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCCceEEEE
Q 006347           30 QLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWS  109 (649)
Q Consensus        30 ~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Ws  109 (649)
                      +.|.++++|+|+++.|++|||.+......+.+|||.+.+ .++||.|||+.|. ...+.|.|+.||+|+|+|.+|.++|+
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~-~~~~~l~l~~dGnLvl~~~~g~~vW~   79 (116)
T cd00028           2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPS-GSSCTLTLQSDGNLVIYDGSGTVVWS   79 (116)
T ss_pred             cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCC-CCCEEEEEecCCCeEEEcCCCcEEEE
Confidence            578899999999999999999987554478999999877 7899999999984 45688999999999999999999999


Q ss_pred             ecCcccccccccceeecccCeEEeeCCCCceEeeecCCC
Q 006347          110 SNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEP  148 (649)
Q Consensus       110 s~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~P  148 (649)
                      +++.+ .....+|+|+|+|||||++. .+.+||||||||
T Consensus        80 S~~~~-~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~P  116 (116)
T cd00028          80 SNTTR-VNGNYVLVLLDDGNLVLYDS-DGNFLWQSFDYP  116 (116)
T ss_pred             ecccC-CCCceEEEEeCCCCEEEECC-CCCEEEcCCCCC
Confidence            99874 34567899999999999985 478999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=8.2e-27  Score=249.57  Aligned_cols=148  Identities=38%  Similarity=0.570  Sum_probs=131.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecC--C---cEEEEEEecc---cccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD--G---QEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~--g---~~vAVK~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      ++..+.++||+|+||.||+|++..  +   ..||||..+.   ......++|.+|+++|++++|||||+++|++.+..+.
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            344455899999999999999762  2   2389999874   3356778999999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +||||+|+||+|+++|.+.  ...++..+++.++.++|+||+|||++.   +|||||.++|+|+..+..+||+||||++.
T Consensus       237 ~ivmEl~~gGsL~~~L~k~--~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKN--KKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRA  311 (474)
T ss_pred             EEEEEecCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccC
Confidence            9999999999999999653  236999999999999999999999998   99999999999999999999999999886


Q ss_pred             e
Q 006347          633 F  633 (649)
Q Consensus       633 ~  633 (649)
                      -
T Consensus       312 ~  312 (474)
T KOG0194|consen  312 G  312 (474)
T ss_pred             C
Confidence            4

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.94  E-value=6.8e-27  Score=228.90  Aligned_cols=148  Identities=25%  Similarity=0.424  Sum_probs=129.1

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .|+...++|+|++|.|||++.+ +|+.||||++.....  .-.+-.++|++.|++++|+|+|.|+.+|......+||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4666779999999999999987 699999999865332  2234567999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++..-|++.-+   ....++.....+++.|+++|+.|+|++.   +|||||||+|||+..++.+||+|||+||.+..
T Consensus        83 ~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   83 CDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             cchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            98876665542   2345788899999999999999999998   99999999999999999999999999999874

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.93  E-value=1.1e-26  Score=243.22  Aligned_cols=160  Identities=30%  Similarity=0.487  Sum_probs=142.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+..  +++.+.+++|++++++++|||||.++.++....+.++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            56778899999999999999876 68899999997643  3456779999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+.+ +|..+|.   ..+.+++..+..|+.++..||.|||+.+   |+|||+||+||||+.++.+|++|||+||.++.+.
T Consensus        82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9976 9999994   4567999999999999999999999987   9999999999999999999999999999986533


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                        ...+++.|||
T Consensus       155 --~vltsikGtP  164 (808)
T KOG0597|consen  155 --SVLTSIKGTP  164 (808)
T ss_pred             --eeeeeccCcc
Confidence              3456788886

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=7.3e-27  Score=241.24  Aligned_cols=153  Identities=29%  Similarity=0.455  Sum_probs=134.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCC-CCCccceEEEEEeCC-eEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGE-EKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lV  555 (649)
                      .++|.+.++||.|.||.||+|+-. +++.||||++++.-. .++-.=++|+..|++|+ |||||+|..++.+.+ ..++|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            357888899999999999999865 789999999975432 22233468999999998 999999999999988 89999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||||+ -+|.++++++  +..+++..+..|+.||++||+|+|.++   +.|||+||+|||+.....+||+||||||.+..
T Consensus        89 fE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen   89 FEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             HHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence            99995 4899999774  678999999999999999999999998   99999999999999999999999999999865


Q ss_pred             CCC
Q 006347          636 NQD  638 (649)
Q Consensus       636 ~~~  638 (649)
                      .+.
T Consensus       163 kpP  165 (538)
T KOG0661|consen  163 KPP  165 (538)
T ss_pred             CCC
Confidence            443

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=1.1e-26  Score=234.47  Aligned_cols=149  Identities=28%  Similarity=0.544  Sum_probs=135.9

Q ss_pred             cCcccceeeccCCcEEEEEEEe-cCCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .+|.+.+.||+|.+|.|-++.. ..|+.||||.+++.   ++++.-.+++|+++|..|+||||+.++.+|...+...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            3577778999999999999986 47999999999765   3456677899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||..+|.|.+|+.   ..+.|++.+..++++||..|+.|+|.+.   ++|||||.+|||||.++++||+||||+-++..
T Consensus       133 EYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  133 EYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence            9999999999994   4567999999999999999999999987   99999999999999999999999999988744

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-25  Score=230.71  Aligned_cols=164  Identities=33%  Similarity=0.479  Sum_probs=137.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC--eEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE--EKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~E  557 (649)
                      .++...+.||+|+||.||++... +|+..|||.+........+.+.+|+.+|.+++|||||+.+|.....+  ..+|.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            34666789999999999999987 48999999987653333677899999999999999999999855555  5889999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++|+|.+++.+...  .+++..+.++..||++||+|||+++   ||||||||+|||++. ++.+||+|||+|+.....
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            9999999999965322  6999999999999999999999988   999999999999999 799999999999988641


Q ss_pred             CCc-cccCceeecC
Q 006347          637 QDQ-ADTGRVVGTL  649 (649)
Q Consensus       637 ~~~-~~~~~~~GT~  649 (649)
                      ... .....++||+
T Consensus       172 ~~~~~~~~~~~Gtp  185 (313)
T KOG0198|consen  172 GTKSDSELSVQGTP  185 (313)
T ss_pred             cccccccccccCCc
Confidence            111 2233467764

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-25  Score=231.78  Aligned_cols=165  Identities=32%  Similarity=0.488  Sum_probs=135.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--------------cccHHHHHHHHHHHhcCCCCCccceE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--------------GQGLEEFMNEVMVISKLQHRNLVRLL  543 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--------------~~~~~~f~~E~~~l~~l~H~niv~l~  543 (649)
                      ..|+|++.++||+|.||.|-+|... +++.||||.+.+..              ....+..++|+.+|++++|+|||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            4478999999999999999999876 78999999996521              01235788999999999999999999


Q ss_pred             EEEEeC--CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          544 GCCVEG--EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       544 g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      .+.-+.  +..|||+|||..|.+...-   .....++..+..++++++..||+|||.++   ||||||||+|+||+++++
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~  248 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGT  248 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCc
Confidence            997654  4789999999998885443   12223899999999999999999999998   999999999999999999


Q ss_pred             eEEEecCCceeeCCC---CCccccCceeecC
Q 006347          622 PKISDFGMAKIFGGN---QDQADTGRVVGTL  649 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~---~~~~~~~~~~GT~  649 (649)
                      +||+|||.+-.....   .......+.+|||
T Consensus       249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTP  279 (576)
T KOG0585|consen  249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTP  279 (576)
T ss_pred             EEeeccceeeecccCCccccHHHHhhcCCCc
Confidence            999999999877222   1222344578886

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.9e-25  Score=236.35  Aligned_cols=164  Identities=28%  Similarity=0.476  Sum_probs=139.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc----cc-ccHHHHHHHHHHHhcCC-CCCccceEEEEEeCC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA----SG-QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGE  550 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~----~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~  550 (649)
                      ...++|.+.+.||+|.||.|+.|... +++.||||.+++.    .. ...+.+.+|+.++++++ ||||++++.+.....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            34467889999999999999999765 7899999977653    11 23456668999999998 999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCC
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGM  629 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGl  629 (649)
                      ..++||||+.+|+|.+++.+   ...+.+.+...++.|++.|++|+|+.+   |+||||||+|||+|.+ +++||+|||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence            99999999999999999954   466888999999999999999999988   9999999999999999 9999999999


Q ss_pred             ceeeCCCCCccccCceeecC
Q 006347          630 AKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       630 a~~~~~~~~~~~~~~~~GT~  649 (649)
                      +......  .....+..||+
T Consensus       168 s~~~~~~--~~~l~t~cGsp  185 (370)
T KOG0583|consen  168 SAISPGE--DGLLKTFCGSP  185 (370)
T ss_pred             ccccCCC--CCcccCCCCCc
Confidence            9988411  12233456664

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.93  E-value=4.6e-26  Score=241.47  Aligned_cols=152  Identities=36%  Similarity=0.636  Sum_probs=134.9

Q ss_pred             HHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       474 ~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ++.+...+.+.+.+.||+|+||+||+|.+.  ..||||+++...  ....++|++|+..+++.+|.||+-+.|+|..+..
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            444444455667789999999999999998  369999997543  4577899999999999999999999999998877


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                       .||..+|++-+|..+|+..  +..++..+...||.|||+||.|||.++   |||||||..||+|.+++.+||+|||||.
T Consensus       463 -AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             -eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccccee
Confidence             9999999999999999763  456899999999999999999999998   9999999999999999999999999997


Q ss_pred             ee
Q 006347          632 IF  633 (649)
Q Consensus       632 ~~  633 (649)
                      .-
T Consensus       537 vk  538 (678)
T KOG0193|consen  537 VK  538 (678)
T ss_pred             ee
Confidence            64

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.93  E-value=1.5e-25  Score=222.34  Aligned_cols=150  Identities=29%  Similarity=0.447  Sum_probs=129.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV  555 (649)
                      ++|...+.|++|.||.||+|+.. +++.||+|+++...+  ...-.-++||.+|.+++|||||.+-.+.+..  +..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            35777889999999999999976 688999999975432  1223457899999999999999999887743  478999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||||++ +|...+..  -.+++...+...+..|+++|++|||..-   |+||||||+|+|+.+.|.+||+||||||.++.
T Consensus       156 Me~~Eh-DLksl~d~--m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMET--MKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGS  229 (419)
T ss_pred             HHHHHh-hHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcC
Confidence            999965 78888854  2367899999999999999999999987   99999999999999999999999999999976


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       230 p  230 (419)
T KOG0663|consen  230 P  230 (419)
T ss_pred             C
Confidence            5

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.92  E-value=2.9e-25  Score=233.04  Aligned_cols=149  Identities=29%  Similarity=0.428  Sum_probs=136.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ..++|.++..||+|+||.||.++.+ +|..+|+|++++..   ..+.+..+.|-.+|....++.||+|+..|.+.+..||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            4568999999999999999999876 69999999998753   3456788899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||||+|||++..+|.   +...|+......++.+++.|+.-||+.+   +|||||||+|+|||..|++||+||||++-+
T Consensus       219 iMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             EEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchh
Confidence            999999999999994   5678999988899999999999999988   999999999999999999999999999755

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.2e-25  Score=228.65  Aligned_cols=164  Identities=27%  Similarity=0.440  Sum_probs=138.9

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC--CCCCccceEEEEEeCC----
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL--QHRNLVRLLGCCVEGE----  550 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~~----  550 (649)
                      +...++..+.+.||+|.||.|++|.++ |+.||||++..   .+++.+.+|.++.+.+  +|+||+.+++.-..++    
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence            344467788899999999999999999 89999999953   4567788888887764  9999999998866544    


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-----DSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      .++||.+|.++|||.+||.    ...++-...++++..+|.||+|||-     ++++.|.|||||+.|||+.+++.+.|+
T Consensus       283 QLwLvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA  358 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  358 (513)
T ss_pred             EEEEeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence            5799999999999999993    4678999999999999999999996     488899999999999999999999999


Q ss_pred             ecCCceeeCCCCCc--cccCceeec
Q 006347          626 DFGMAKIFGGNQDQ--ADTGRVVGT  648 (649)
Q Consensus       626 DFGla~~~~~~~~~--~~~~~~~GT  648 (649)
                      |+|||.....+...  ...+.-+||
T Consensus       359 DLGLAv~h~~~t~~idi~~N~rVGT  383 (513)
T KOG2052|consen  359 DLGLAVRHDSDTDTIDIPPNPRVGT  383 (513)
T ss_pred             eceeeEEecccCCcccCCCCCccce
Confidence            99999998655322  234455666

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.4e-25  Score=237.23  Aligned_cols=159  Identities=35%  Similarity=0.543  Sum_probs=142.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .|...++||+|+.|.||.+... +++.||||++........+-+++|+.+|+..+|+|||+++..+...++.|+|||||+
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            3555679999999999999754 788999999987655556678899999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCcc
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA  640 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  640 (649)
                      +|+|.+.+.    ...+++.++..|++++++||+|||.++   |||||||.+|||++.++.+||+|||++..+...+.+.
T Consensus       354 ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  354 GGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             CCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            999999984    345899999999999999999999998   9999999999999999999999999999998888765


Q ss_pred             ccCceeecC
Q 006347          641 DTGRVVGTL  649 (649)
Q Consensus       641 ~~~~~~GT~  649 (649)
                      .+  ++|||
T Consensus       427 ~T--mVGTP  433 (550)
T KOG0578|consen  427 ST--MVGTP  433 (550)
T ss_pred             cc--ccCCC
Confidence            54  89996

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.92  E-value=4.8e-25  Score=234.06  Aligned_cols=153  Identities=31%  Similarity=0.458  Sum_probs=129.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC-
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE-  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~-  550 (649)
                      .++|.+.++||+|+||.||+|...      +++.||||++.... ....+.+.+|+.++.++ +||||++++++|.+.+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            457888899999999999999742      35689999986533 23456799999999999 8999999999987654 


Q ss_pred             eEEEEEecCCCCChhhhhcCCCC---------------------------------------------------------
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLK---------------------------------------------------------  573 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~---------------------------------------------------------  573 (649)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            57899999999999999864211                                                         


Q ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          574 --KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       574 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                        ...+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~  226 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  226 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeeccccccccc
Confidence              134788899999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=9e-26  Score=214.82  Aligned_cols=150  Identities=33%  Similarity=0.507  Sum_probs=134.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|.+.+.||+|.||.||.|..+ ++..||+|++.+..   .+-.+++++|+++-..|+||||+++++++.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            357888899999999999999976 67899999997642   34457899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||.+.|+|...|.+. ....++......++.|+|.||.|+|..+   +|||||||+|+|++.++..||+|||.+..-
T Consensus       101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~  174 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA  174 (281)
T ss_pred             EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeec
Confidence            9999999999999642 3455788888899999999999999887   999999999999999999999999998864

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.92  E-value=6.7e-25  Score=221.58  Aligned_cols=150  Identities=31%  Similarity=0.520  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCC-ccceEEEEEeCC------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRN-LVRLLGCCVEGE------  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~------  550 (649)
                      ..|...++||+|.||+||+|+.. +|+.||+|++.-..+  .-.....+|+.++.+++|+| ||+|++++.+.+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            34556678999999999999876 789999999975433  23345689999999999999 999999999887      


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ..++|+||+ .-+|..++...... ..++...+..++.||++||+|||+++   |+||||||+|||+++.+.+||+|||+
T Consensus        91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence            788999999 45899998653322 45777889999999999999999998   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      ||.++
T Consensus       167 Ara~~  171 (323)
T KOG0594|consen  167 ARAFS  171 (323)
T ss_pred             HHHhc
Confidence            99775

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.92  E-value=9.3e-25  Score=193.88  Aligned_cols=113  Identities=42%  Similarity=0.712  Sum_probs=99.6

Q ss_pred             CCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCCceEEEE
Q 006347           30 QLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWS  109 (649)
Q Consensus        30 ~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Ws  109 (649)
                      +.|..++.|+|+++.|++|||.+... ..+.+|||+..+ .++||+|||+.|+.+ ++.|.|+.||+|+|+|.+|.++|+
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q-~dgnlV~~~~~~-~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~vW~   78 (114)
T smart00108        2 NTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILYKSSS-RTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRVVWS   78 (114)
T ss_pred             cccCCCCEEecCCCcEeeeccccCCC-CCEEEEEEECCC-CcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCEEEE
Confidence            56889999999999999999998754 578899999877 889999999999865 488999999999999999999999


Q ss_pred             ecCcccccccccceeecccCeEEeeCCCCceEeeecCC
Q 006347          110 SNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQE  147 (649)
Q Consensus       110 s~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~  147 (649)
                      |++. .+....+|+|+|+|||||++. .++++||||||
T Consensus        79 S~t~-~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~~  114 (114)
T smart00108       79 SNTT-GANGNYVLVLLDDGNLVIYDS-DGNFLWQSFDY  114 (114)
T ss_pred             eccc-CCCCceEEEEeCCCCEEEECC-CCCEEeCCCCC
Confidence            9986 334567899999999999985 46799999997

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=1.2e-24  Score=227.50  Aligned_cols=152  Identities=32%  Similarity=0.541  Sum_probs=131.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-----------------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccce
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-----------------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRL  542 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-----------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l  542 (649)
                      ++|.+.++||+|+||.||++..++                 +..||||.+.... .....+|.+|+.++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            467888999999999999997532                 3469999986542 3345689999999999999999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCChhhhhcCCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 006347          543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPL----------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH  606 (649)
Q Consensus       543 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH  606 (649)
                      ++++.+.+..++||||+++|+|.+++....                ....++|..+++++.||+.||.|||+.+   |+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence            999999999999999999999999985321                1134788999999999999999999987   999


Q ss_pred             cCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          607 RDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       607 rDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||||+|||+++++.+||+|||+++.+..
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~  190 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYA  190 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceeccc
Confidence            99999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=2e-24  Score=232.31  Aligned_cols=150  Identities=25%  Similarity=0.332  Sum_probs=133.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ..++|++.+.||+|+||.||++... +++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            3467889999999999999999986 5789999998642   22344568899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++..    ..+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus       121 v~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         121 VMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence            9999999999999843    34788889999999999999999987   9999999999999999999999999999874


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       194 ~  194 (370)
T cd05621         194 E  194 (370)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3e-24  Score=227.60  Aligned_cols=148  Identities=29%  Similarity=0.445  Sum_probs=133.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. +++.||||++++..   ....+.+..|+.++..++|+||+++++++.+++..+|||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46888999999999999999987 58899999987532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++++|.+++..   ...+++.....++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||+|+...
T Consensus        81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~  152 (333)
T cd05600          81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIV  152 (333)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence            99999999999943   346889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=2.7e-24  Score=230.77  Aligned_cols=148  Identities=26%  Similarity=0.384  Sum_probs=132.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||++... +++.+|||.+.+..   ......+..|+.++.+++|+||+++++.+.+....+|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            46888899999999999999876 68899999996532   233467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            99999999999853   356899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.6e-24  Score=230.87  Aligned_cols=148  Identities=26%  Similarity=0.398  Sum_probs=133.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+++.. +++.||||++....   ......+.+|+.++..++|+||+++++.+.+++..+|||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            46888999999999999999976 68999999996532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            99999999999853   346899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.91  E-value=4.5e-24  Score=225.34  Aligned_cols=141  Identities=28%  Similarity=0.322  Sum_probs=126.6

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.||+|+||.||+++.. +|+.+|||.+++..   ......+.+|+.++.+++||||+++++.+.+++..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999875 68999999987532   234467889999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            99999853   456899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=8.3e-25  Score=249.66  Aligned_cols=149  Identities=36%  Similarity=0.642  Sum_probs=133.3

Q ss_pred             CcccceeeccCCcEEEEEEEec--CCc----EEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK--DGQ----EIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~--~g~----~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +.+..+.||+|+||.||+|.+.  ++.    .||||.+++. +.++..+|++|..+|++++|||||+++|.|.+....+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            3455678999999999999976  243    4999999775 45677899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          555 IYEYMPNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ++|||++|+|..||++.+    +...++..+++.|+.|||+|+.||++++   .|||||.++|+||++...+||+|||||
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchh
Confidence            999999999999998642    2456899999999999999999999988   999999999999999999999999999


Q ss_pred             eee
Q 006347          631 KIF  633 (649)
Q Consensus       631 ~~~  633 (649)
                      |.+
T Consensus       850 rDi  852 (1025)
T KOG1095|consen  850 RDI  852 (1025)
T ss_pred             Hhh
Confidence            944

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.9e-24  Score=230.73  Aligned_cols=147  Identities=27%  Similarity=0.374  Sum_probs=131.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.++||+|+||.||++... +++.||||++.+..   ....+++.+|+.++.+++||||+++++++.+++..+|||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            46888899999999999999875 68899999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999999853   356888889999999999999999987   999999999999999999999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.91  E-value=3.9e-24  Score=231.07  Aligned_cols=146  Identities=24%  Similarity=0.347  Sum_probs=131.0

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .|...+.||+|+||+||+|+.. +++.+|||++.+..   ....+.+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5788899999999999999875 68899999996532   2345678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+++|+|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+++.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            9999999999853   346888888999999999999999987   999999999999999999999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.91  E-value=4e-25  Score=222.92  Aligned_cols=149  Identities=32%  Similarity=0.507  Sum_probs=122.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE-----EEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK-----MLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-----~lV  555 (649)
                      .|...+.+|.|+||.||+|++. ++++||||++-...+    .--+|+++|+++.|||||+|.-++....+.     .||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            3566689999999999999987 568999999854332    234789999999999999999988754432     489


Q ss_pred             EecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~~~  633 (649)
                      |||||. +|.++++... .+..++...+.-+..||.+||+|||+.+   |+||||||+|+|+|.+ +.+||+|||-|+++
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999976 7888886421 2345677777789999999999999977   9999999999999976 89999999999998


Q ss_pred             CCCCC
Q 006347          634 GGNQD  638 (649)
Q Consensus       634 ~~~~~  638 (649)
                      ...+.
T Consensus       177 ~~~ep  181 (364)
T KOG0658|consen  177 VKGEP  181 (364)
T ss_pred             ccCCC
Confidence            65543

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.91  E-value=7.2e-24  Score=219.57  Aligned_cols=149  Identities=29%  Similarity=0.414  Sum_probs=131.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .|+..+.||+|+||.||++... +++.||||.+....   ......+.+|+.++.+++|+||+++++.+.+++..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            3677889999999999999875 78999999986432   2334568899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++|+|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            99999999888542 2346899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.91  E-value=5.5e-24  Score=226.24  Aligned_cols=149  Identities=26%  Similarity=0.395  Sum_probs=132.2

Q ss_pred             cCcccceeeccCCcEEEEEEEecC--CcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD--GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~--g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|....  +..||+|++.+..   ....+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            468888999999999999998653  3689999986432   23456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       110 ~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        110 LEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            999999999999953   346889999999999999999999987   99999999999999999999999999998643

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.91  E-value=5.6e-24  Score=225.18  Aligned_cols=149  Identities=27%  Similarity=0.401  Sum_probs=133.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+++.. +++.||||.+.+..   ....+.+.+|+.++.+++||||+++++.+.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            46888899999999999999986 68899999986432   234567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999999853   346788888999999999999999987   99999999999999999999999999998743

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5.3e-24  Score=218.64  Aligned_cols=165  Identities=27%  Similarity=0.419  Sum_probs=140.4

Q ss_pred             cCcccceeeccCCcEEEEEEEe-cCCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.|++.++||.|..++||+|.. +.++.||||++.-.. .....++++|+..+..++||||++++..|+.+.+.|+||.|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            5688889999999999999985 468999999997543 33468999999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      |.+||+.++++..-. ..+++..+..|.+++++||.|||.++   .||||||+.||||+++|.+||+|||....+-....
T Consensus       106 Ma~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence            999999999975433 34889999999999999999999998   99999999999999999999999997665532222


Q ss_pred             c--cccCceeecC
Q 006347          639 Q--ADTGRVVGTL  649 (649)
Q Consensus       639 ~--~~~~~~~GT~  649 (649)
                      +  ...+..+|||
T Consensus       182 R~~~rf~tfvgtp  194 (516)
T KOG0582|consen  182 RQVTRFNTFVGTP  194 (516)
T ss_pred             eeeEeeccccCcc
Confidence            2  1224567764

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.91  E-value=8.9e-25  Score=235.89  Aligned_cols=161  Identities=33%  Similarity=0.502  Sum_probs=138.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------eEEE
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------EKML  554 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~l  554 (649)
                      +...+.||+|+||.||+|+.+ +|+.||||..++.. ....+...+|++++++++|+|||++++.-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            445578999999999999965 79999999987643 345567789999999999999999999866544      5689


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc--CCC--ceEEEecCCc
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD--EEL--NPKISDFGMA  630 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~--~~~--~~Ki~DFGla  630 (649)
                      |||||++|||...|.+......|++.+.+.+..+++.||.|||+++   |+||||||.||++-  +++  .-||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            9999999999999988777788999999999999999999999988   99999999999984  333  4799999999


Q ss_pred             eeeCCCCCccccCceeecC
Q 006347          631 KIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       631 ~~~~~~~~~~~~~~~~GT~  649 (649)
                      |-+.+++   ...+++||+
T Consensus       172 rel~d~s---~~~S~vGT~  187 (732)
T KOG4250|consen  172 RELDDNS---LFTSLVGTE  187 (732)
T ss_pred             ccCCCCC---eeeeecCch
Confidence            9986655   455789984

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.91  E-value=7.4e-24  Score=224.21  Aligned_cols=141  Identities=29%  Similarity=0.346  Sum_probs=126.8

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.||+|+||.||++... +++.||||.+.+.   ......++.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999876 6899999999753   2334567889999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            99988843   346899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.3e-24  Score=222.89  Aligned_cols=149  Identities=28%  Similarity=0.385  Sum_probs=133.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||++... +++.||||++....   ....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36788899999999999999976 68899999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999999853   346889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.5e-24  Score=222.98  Aligned_cols=140  Identities=27%  Similarity=0.334  Sum_probs=126.1

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||.||++... +++.||+|.+.+.   .......+..|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999976 5789999998643   234456788999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~  144 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNM  144 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCc
Confidence            999853   346899999999999999999999987   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.91  E-value=4.4e-24  Score=229.67  Aligned_cols=150  Identities=26%  Similarity=0.338  Sum_probs=132.4

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ..++|++.+.||+|+||.||+++.. +++.+|||.+++.   .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            3457888999999999999999876 6889999998642   22344567899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++..    ..++......++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999999843    34778888889999999999999987   9999999999999999999999999998875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       194 ~  194 (370)
T cd05596         194 A  194 (370)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3e-24  Score=231.32  Aligned_cols=163  Identities=32%  Similarity=0.468  Sum_probs=141.4

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~  552 (649)
                      ...++|.....||+|.||+|+++.++ +++.+|||.+++..   ..+.+..+.|.+++... +||.|++|+.++...++.
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            34468999999999999999999987 67899999998753   45667788898888877 599999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +.||||..||++..+.    +...+++.....+|..|+.||.|||+++   ||+||||.+|||||.+|++||+||||+|.
T Consensus       445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence            9999999999954443    4467899999999999999999999998   99999999999999999999999999998


Q ss_pred             eCCCCCccccCceeecC
Q 006347          633 FGGNQDQADTGRVVGTL  649 (649)
Q Consensus       633 ~~~~~~~~~~~~~~GT~  649 (649)
                      -.....  .|+++.|||
T Consensus       518 ~m~~g~--~TsTfCGTp  532 (694)
T KOG0694|consen  518 GMGQGD--RTSTFCGTP  532 (694)
T ss_pred             cCCCCC--ccccccCCh
Confidence            654433  345689996

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.91  E-value=8.4e-24  Score=223.80  Aligned_cols=151  Identities=26%  Similarity=0.359  Sum_probs=134.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||++... +++.+|||+++...   ....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46888999999999999999876 68899999997532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            999999999999542  346899999999999999999999987   999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.91  E-value=1.7e-24  Score=190.64  Aligned_cols=99  Identities=47%  Similarity=0.957  Sum_probs=88.4

Q ss_pred             eecCCCCCccccccccceeeeEEeeeEEe---------c--cCCeEEEEEEccCCcEEEEEEcCCCCCeEEEEEeeccCC
Q 006347          206 WRSGPWNGQIFIGIPELKSVYLFRHNFTF---------G--FANDWTFFALTAQGILEERIWIKWKDNWEVGFLNLRTEC  274 (649)
Q Consensus       206 w~sg~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~l~~~G~l~~~~~~~~~~~W~~~~~~~~~~C  274 (649)
                      ||+|+|||..|.++|++.....+.+.|+.         .  ..+.++|++||++|+++++.|++..+.|.+.|++|.++|
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~C   80 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQC   80 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccCC
Confidence            89999999999999999855555555543         1  156789999999999999999999999999999999999


Q ss_pred             ccccccCCcccccCCCCCcccCCCCCccCC
Q 006347          275 DVYGKCGAFGICNSQEKPICSCLEGFEPKN  304 (649)
Q Consensus       275 ~~~~~CG~~g~C~~~~~~~C~C~~gf~~~~  304 (649)
                      |+|+.||+||+|+.+..|.|+||+||+|++
T Consensus        81 d~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   81 DVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            999999999999988889999999999984

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=9.3e-24  Score=234.69  Aligned_cols=164  Identities=19%  Similarity=0.238  Sum_probs=138.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-C-CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-D-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .|.+.+.||+|+||.||++... + ++.||+|.+..........+..|+.++++++|||||++++++.+++..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3888899999999999999865 3 6788999875544455567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          560 PNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       560 ~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      ++|+|.++|.+.. ....+++.+...++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+|+.+.....
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            9999999886432 2446889999999999999999999987   99999999999999999999999999998754433


Q ss_pred             ccccCceeec
Q 006347          639 QADTGRVVGT  648 (649)
Q Consensus       639 ~~~~~~~~GT  648 (649)
                      ........||
T Consensus       225 ~~~~~~~~gt  234 (478)
T PTZ00267        225 LDVASSFCGT  234 (478)
T ss_pred             cccccccCCC
Confidence            2223334555

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=6.9e-24  Score=229.21  Aligned_cols=146  Identities=25%  Similarity=0.365  Sum_probs=130.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .|+..++||+|+||+||+|... +++.+|||.+.+..   ....+.+.+|+.++++++|+||+++++.+.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5788899999999999999875 68899999986532   2345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+++|+|.+++.+   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            9999999999853   345788888899999999999999987   999999999999999999999999998644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.91  E-value=5.2e-24  Score=229.55  Aligned_cols=153  Identities=33%  Similarity=0.469  Sum_probs=132.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEe------cCCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~------~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .++|++.+.||+|+||.||+|+.      .++..||||+++... ....+.+.+|+.++..+ +||||++++++|.+++.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45688889999999999999974      245689999986432 33456788999999999 89999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC----------------------------------------------------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK----------------------------------------------------------  573 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  573 (649)
                      .++||||+++|+|.+++.....                                                          
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            9999999999999999854210                                                          


Q ss_pred             --------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          574 --------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       574 --------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                                    ...+++..+..++.||++||+|||+.+   |+||||||+|||++++..+||+|||+++.+..
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccC
Confidence                          125789999999999999999999987   99999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=8.3e-24  Score=228.06  Aligned_cols=147  Identities=24%  Similarity=0.361  Sum_probs=131.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+++.. +++.||||.+.+..   ....+.+.+|+.++.+++|+||+++++.+.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36888999999999999999876 68899999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999999954   345788888899999999999999987   999999999999999999999999998644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.3e-23  Score=222.49  Aligned_cols=150  Identities=25%  Similarity=0.326  Sum_probs=133.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||++... +++.||||.+.+.   .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46888899999999999999976 6889999998642   2234566889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++.+  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999999853  2345889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.91  E-value=8.1e-24  Score=227.69  Aligned_cols=156  Identities=24%  Similarity=0.324  Sum_probs=136.2

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ..++....++|++.+.||+|+||.||++... +++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++.+.+
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            3344455678999999999999999999976 6789999998642   22344567899999999999999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      ++..++||||+++|+|.+++..    ..++...+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG  187 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG  187 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCC
Confidence            9999999999999999999843    34788888899999999999999987   9999999999999999999999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +|+.+..
T Consensus       188 ~a~~~~~  194 (371)
T cd05622         188 TCMKMNK  194 (371)
T ss_pred             ceeEcCc
Confidence            9998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=7.2e-24  Score=223.79  Aligned_cols=141  Identities=28%  Similarity=0.327  Sum_probs=126.4

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.||+|+||.||++... +|+.||+|.++...   ......+.+|+.++.+++||||+++++.+.+.+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36999999999999875 68999999986532   234567788999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            99988843   346899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=1.2e-23  Score=222.92  Aligned_cols=151  Identities=23%  Similarity=0.297  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+++.. +++.+|||.+.+.   .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888999999999999999976 6788999998642   1233456888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++...  ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            999999999999642  346889999999999999999999987   999999999999999999999999999887543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.91  E-value=1.8e-23  Score=220.87  Aligned_cols=141  Identities=28%  Similarity=0.323  Sum_probs=125.6

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.||+|+||.||++... +++.||+|.+++..   .....++..|++++..++|+||+++++++.+.+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999875 68999999997532   234567788999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|..++..   ...+++..+..++.||+.||+|||+ .+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~  146 (325)
T cd05594          81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEG  146 (325)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence            99988843   3468999999999999999999997 55   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.91  E-value=5.7e-24  Score=220.95  Aligned_cols=156  Identities=32%  Similarity=0.496  Sum_probs=133.6

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      .+.||.|.||+||-|+++ +|+.||||.|++.  ..+++..+++|+.+|.+++||.||.|...|...+..++|||-+ +|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence            378999999999999876 7999999999764  3456688999999999999999999999999999999999999 45


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCCceeeCCCCCc
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGla~~~~~~~~~  639 (649)
                      +..++|.. .++..|+......++.||+.||.|||.++   |+|+||||+||||.+.   -.+||+|||+||+++..+.+
T Consensus       648 DMLEMILS-sEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  648 DMLEMILS-SEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             hHHHHHHH-hhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence            55455433 35667889888999999999999999998   9999999999999754   36999999999999765543


Q ss_pred             cccCceeecC
Q 006347          640 ADTGRVVGTL  649 (649)
Q Consensus       640 ~~~~~~~GT~  649 (649)
                         .+++|||
T Consensus       724 ---rsVVGTP  730 (888)
T KOG4236|consen  724 ---RSVVGTP  730 (888)
T ss_pred             ---hhhcCCc
Confidence               3478886

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.1e-23  Score=224.70  Aligned_cols=150  Identities=29%  Similarity=0.431  Sum_probs=135.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||+||++... +++.||||++++..   ....+.+..|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46888999999999999999977 68999999986532   245567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            999999999999542   56899999999999999999999987   999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.90  E-value=1.8e-23  Score=226.71  Aligned_cols=153  Identities=30%  Similarity=0.443  Sum_probs=131.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~  551 (649)
                      .++|.+.+.||+|+||.||+|+..      .+..||||+++... ....+.|.+|+.++.++. ||||++++++|.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            467888899999999999999863      23479999996543 234567999999999995 9999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC----------------------------------------------------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK----------------------------------------------------------  573 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  573 (649)
                      .+|||||+++|+|.++|.....                                                          
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            9999999999999998854210                                                          


Q ss_pred             -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC
Q 006347          574 -----------------------------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       574 -----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~  618 (649)
                                                         ...+++.++..++.|+++||+|||+.+   |+||||||+|||+++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence                                               124788889999999999999999987   999999999999999


Q ss_pred             CCceEEEecCCceeeCC
Q 006347          619 ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~  635 (649)
                      ++.+||+|||+++.+..
T Consensus       273 ~~~~kL~DfGla~~~~~  289 (400)
T cd05105         273 GKIVKICDFGLARDIMH  289 (400)
T ss_pred             CCEEEEEeCCcceeccc
Confidence            99999999999997643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.90  E-value=2.7e-23  Score=215.66  Aligned_cols=148  Identities=28%  Similarity=0.440  Sum_probs=130.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.++||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46888899999999999999876 68899999986432 23345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.+++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus        85 ~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          85 LD-SDLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CC-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            97 489888853  2345788999999999999999999987   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.90  E-value=2.9e-23  Score=220.06  Aligned_cols=149  Identities=23%  Similarity=0.298  Sum_probs=131.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.++||+|+||.||+++.. +++.+|+|.+.+.   .....+.+..|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            46888899999999999999977 5788999998642   1223456889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++|+|.+++.+.  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            999999999999642  345889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.90  E-value=1.2e-23  Score=226.59  Aligned_cols=153  Identities=32%  Similarity=0.494  Sum_probs=131.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .++|++.+.||+|+||.||++...      ++..||||++.... ....+.+.+|+.+++.+ +|+|||+++++|.+...
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            356888899999999999998742      34579999996543 23356788999999999 89999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCC-----------------------------------------------------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPL-----------------------------------------------------------  572 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~-----------------------------------------------------------  572 (649)
                      .++||||+++|+|.++++...                                                           
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            999999999999999985321                                                           


Q ss_pred             --------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          573 --------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       573 --------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                              ....+++.+..+|+.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence                    1124788999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=2.5e-24  Score=233.87  Aligned_cols=149  Identities=32%  Similarity=0.558  Sum_probs=131.7

Q ss_pred             ceeeccCCcEEEEEEEec-CC----cEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          486 SSKLGQGGFGPVYWGRLK-DG----QEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g----~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++||+|+||+||||.+- +|    -+||||.+... ..+.-++++.|+.+|.++.|+||+||+|+|.... ..||++||
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            468999999999999753 44    37899988654 3456789999999999999999999999999776 88999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      |.|.|.+|++.  .+..+..+..+.|..|||+||.|||++.   ++||||.++|+|+.+...+||.|||+|+++..+..+
T Consensus       780 P~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  780 PLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             ccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence            99999999975  4566888999999999999999999887   999999999999999999999999999999776554


Q ss_pred             c
Q 006347          640 A  640 (649)
Q Consensus       640 ~  640 (649)
                      .
T Consensus       855 y  855 (1177)
T KOG1025|consen  855 Y  855 (1177)
T ss_pred             c
Confidence            3

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=228.37  Aligned_cols=162  Identities=31%  Similarity=0.512  Sum_probs=142.9

Q ss_pred             HHHHHHhcCcccceeeccCCcEEEEEEEecC-CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       474 ~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      ++.+....+..+..+||-|.+|.||.|.++. .-.||||.++.. .-..++|+.|+.+|+.++|||+|+|+|+|......
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            4445555567777899999999999999873 568999999653 45679999999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      |||+|||.+|+|.+||++- .+..++.-.++.+|.||+.||.||..+.   +|||||.++|+|+.++..+||+||||+|+
T Consensus       339 YIiTEfM~yGNLLdYLRec-nr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl  414 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLREC-NRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL  414 (1157)
T ss_pred             EEEEecccCccHHHHHHHh-chhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence            9999999999999999763 3455777888999999999999999887   99999999999999999999999999999


Q ss_pred             eCCCCCcc
Q 006347          633 FGGNQDQA  640 (649)
Q Consensus       633 ~~~~~~~~  640 (649)
                      +.++...+
T Consensus       415 MtgDTYTA  422 (1157)
T KOG4278|consen  415 MTGDTYTA  422 (1157)
T ss_pred             hcCCceec
Confidence            98776543

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.90  E-value=3.1e-23  Score=219.04  Aligned_cols=144  Identities=31%  Similarity=0.465  Sum_probs=125.6

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHH---hcCCCCCccceEEEEEeCCeEEEE
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVI---SKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      |++.+.||+|+||.||++... +++.||||.+++..   ....+.+..|+.++   .+++||||+++++++.+++..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            567789999999999999876 68999999996532   23345667776655   566899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||+++++|..++.    ...+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            99999999988874    346899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=2.4e-23  Score=213.27  Aligned_cols=148  Identities=28%  Similarity=0.496  Sum_probs=131.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|.+.    .+..||+|.++... ....+.|.+|+.++.+++||||+++++++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            46788899999999999999864    35689999987543 23346789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||+++|+|.+++...  ...+++..++.++.|++.||+|||+.+   ++||||||+|||++.++.+|++|||++...
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          85 TEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            9999999999999642  346899999999999999999999987   999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=3.2e-23  Score=218.84  Aligned_cols=141  Identities=32%  Similarity=0.404  Sum_probs=124.9

Q ss_pred             eeeccCCcEEEEEEEec----CCcEEEEEEecccc----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.||+|+||.||++...    .++.||||.+++..    ......+.+|+.++++++||||+++++++.+++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            68999999999999853    57899999986532    23345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++++|.+++..   ...+.+.....++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        82 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          82 LSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             CCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            999999999843   345788888899999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.90  E-value=3.5e-23  Score=219.26  Aligned_cols=148  Identities=30%  Similarity=0.391  Sum_probs=130.0

Q ss_pred             CcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc----cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS----GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~  552 (649)
                      +|++.+.||+|+||.||+++..    +++.||+|.+.+..    ....+.+..|+.++.++ +|+||+++++++.+.+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4778899999999999998753    57899999986432    23345688999999999 599999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            999999999999999853   346889999999999999999999987   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       155 ~~~  157 (332)
T cd05614         155 FLS  157 (332)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.90  E-value=2.5e-23  Score=218.86  Aligned_cols=149  Identities=32%  Similarity=0.583  Sum_probs=129.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|++.+.||+|+||.||+|+.. +++    .||||.++... ....+++.+|+.+++.++|+||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            45888899999999999999864 333    48999986543 34567899999999999999999999999865 5679


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+||+++|+|.+++...  ...+++..++.++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence            99999999999999642  345889999999999999999999987   9999999999999999999999999999875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       161 ~  161 (316)
T cd05108         161 A  161 (316)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=5.8e-24  Score=227.35  Aligned_cols=147  Identities=33%  Similarity=0.482  Sum_probs=133.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +-|++.+.||.|+-|.|-.|++. +|+.+|||.+.+..   ......+.+|+.+|+.|.|||+++|+.++.+..++|||+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            34788899999999999999876 79999999997642   233466789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|.|.++|.   +++++.+.+..+++.||..|+.|+|..+   |+||||||+|+|||..+++||+|||||.+-
T Consensus        92 Eyv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen   92 EYVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLE  162 (786)
T ss_pred             EecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecc
Confidence            9999999999994   5678999999999999999999999887   999999999999999999999999999974

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=4.6e-23  Score=215.44  Aligned_cols=149  Identities=28%  Similarity=0.440  Sum_probs=130.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|.+.++||+|+||.||+|... +++.||||.+..... .....+.+|+.++++++|+||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            367888999999999999999986 688999999865432 234567889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++ ++|.+++..  ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus        84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence            995 678777753  2345888999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.90  E-value=4.1e-23  Score=218.06  Aligned_cols=146  Identities=30%  Similarity=0.404  Sum_probs=128.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~  556 (649)
                      +|++.+.||+|+||.||+|... +++.||||.+.+.   .....+.+..|++++..+.| ++|+++++++.+.+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4778899999999999999876 5789999998753   23455678899999999965 56889999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            99999999999853   345889999999999999999999987   999999999999999999999999999854

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.90  E-value=3.3e-23  Score=222.12  Aligned_cols=148  Identities=26%  Similarity=0.391  Sum_probs=132.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|+..+.||+|+||.||++... +++.||||.+....   ....+.+..|+.++.+++|+||+++++.+.+.+..+|||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            36888899999999999999876 68899999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            99999999999853   356889999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.90  E-value=4.1e-23  Score=218.59  Aligned_cols=141  Identities=30%  Similarity=0.387  Sum_probs=125.0

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||++... +++.+|+|.+++.   .....+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            47999999999999976 6789999999753   223445678899888877 899999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|..++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            999988843   356899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.90  E-value=4.1e-23  Score=217.97  Aligned_cols=146  Identities=31%  Similarity=0.409  Sum_probs=128.1

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +|.+.+.||+|+||.||+|... +++.||||.+.+..   ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4778899999999999999876 57899999987532   23345677788888877 6899999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            99999999988843   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=3.7e-23  Score=217.82  Aligned_cols=143  Identities=31%  Similarity=0.337  Sum_probs=126.8

Q ss_pred             eeeccCCcEEEEEEEe----cCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          487 SKLGQGGFGPVYWGRL----KDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~----~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      +.||+|+||.||++..    .+|+.+|||++.+..  ......+..|++++.+++|+||+++++++.+++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5899999999999875    357899999997532  2244567889999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +|+|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  150 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID  150 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence            9999999843   356899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.90  E-value=4.1e-23  Score=217.78  Aligned_cols=141  Identities=30%  Similarity=0.442  Sum_probs=125.0

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+|+.. +++.||||.+.+..   ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36999999999999876 57899999987532   33456678899998876 799999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591          81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceec
Confidence            999988853   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.90  E-value=6.9e-23  Score=217.05  Aligned_cols=150  Identities=27%  Similarity=0.351  Sum_probs=133.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||+++.. ++..+|+|.+.... ....+++.+|++++.+++|+||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            367888999999999999999976 68899999886542 2345679999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++++|.+++..   ...+++..+..++.|++.||.|||+.+  +|+||||||+|||+++++.+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            9999999999853   345889999999999999999999853  39999999999999999999999999998764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.90  E-value=4.6e-23  Score=217.67  Aligned_cols=146  Identities=32%  Similarity=0.426  Sum_probs=128.0

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +|...+.||+|+||+||++... +++.||||.+.+..   ....+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3667789999999999999876 68899999987532   234567888999998885 678889999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...+++.++..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEecccccccc
Confidence            99999999999843   356899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=233.73  Aligned_cols=152  Identities=28%  Similarity=0.444  Sum_probs=134.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecCC-cEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEE-EEe------C
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKDG-QEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGC-CVE------G  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~g-~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~-~~~------~  549 (649)
                      ...+.++.+.|.+|||+.||.+....+ .++|+|++-..++...+..++||++|++|. |+|||.+++. ...      .
T Consensus        35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            334567778999999999999998865 999999987778888999999999999996 9999999993 322      1


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      -+.+|.||||++|+|-+++..+.+.. |++.++++|+.++++|+++||.. ++||||||||.|||||..+++.||||||-
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS  192 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS  192 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence            26789999999999999997665554 99999999999999999999986 58999999999999999999999999998


Q ss_pred             cee
Q 006347          630 AKI  632 (649)
Q Consensus       630 a~~  632 (649)
                      |.-
T Consensus       193 att  195 (738)
T KOG1989|consen  193 ATT  195 (738)
T ss_pred             ccc
Confidence            864

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.90  E-value=5.2e-23  Score=212.96  Aligned_cols=149  Identities=24%  Similarity=0.417  Sum_probs=131.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||+++.. +++.+|||++....  ....+.+.+|+.++.+++|+||+++++++.+++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46888999999999999999986 67899999986532  2345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |++++.|..+..   ....+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            999887765542   2346889999999999999999999887   99999999999999999999999999998643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.90  E-value=3.6e-23  Score=221.17  Aligned_cols=143  Identities=27%  Similarity=0.436  Sum_probs=125.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      |...++||+|+||.||+++.. +++.||||.+..... ...+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            445679999999999999876 689999999865332 345678999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+..       ..++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence            99985432       3456778889999999999999987   99999999999999999999999999998743

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.90  E-value=5.8e-23  Score=216.82  Aligned_cols=141  Identities=30%  Similarity=0.383  Sum_probs=122.4

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHH-HHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVM-VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||+||++... +++.||||.+.+..   ....+++..|.. ++..++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            37999999999999986 68999999986532   223345556655 56788999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|.+++..   ...+++.....++.||++||.|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            999999853   456889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.90  E-value=5.9e-23  Score=216.15  Aligned_cols=142  Identities=33%  Similarity=0.426  Sum_probs=123.3

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+|... +++.||||.++...   ....+.+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999976 57899999986532   23445666777777654 899999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+...
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~  147 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENM  147 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence            999998853   346889999999999999999999987   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=5.4e-23  Score=217.68  Aligned_cols=140  Identities=28%  Similarity=0.374  Sum_probs=125.3

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||++... +++.||||.+++..   ....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36999999999999876 68899999997532   23456688999999998 799999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      |+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.
T Consensus        81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccc
Confidence            999988843   356899999999999999999999987   99999999999999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.90  E-value=5.6e-25  Score=214.67  Aligned_cols=159  Identities=26%  Similarity=0.494  Sum_probs=142.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      -|.+.++||+|++|.|||+.++ .|+.+|||++.-  +.+.+++.+|+.++++...+.+|+++|.+......+||||||-
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            3777899999999999999877 699999999854  4678999999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCcc
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA  640 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  640 (649)
                      .|+..++++-  ++++|++.++..++...++||+|||.-.   -||||||+.||||+-++.+|++|||.|..+...-.+.
T Consensus       112 AGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  112 AGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             CCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            9999999964  5678999999999999999999999865   8999999999999999999999999999885433333


Q ss_pred             ccCceeecC
Q 006347          641 DTGRVVGTL  649 (649)
Q Consensus       641 ~~~~~~GT~  649 (649)
                        +++.|||
T Consensus       187 --NTVIGTP  193 (502)
T KOG0574|consen  187 --NTVIGTP  193 (502)
T ss_pred             --CccccCc
Confidence              4488886

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.90  E-value=6e-23  Score=212.12  Aligned_cols=144  Identities=31%  Similarity=0.417  Sum_probs=126.8

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||+||++... +++.+|||.+....   ....+.+..|+.++++++|+||+++.+++.++...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999876 68899999986432   22346778999999999999999999999999999999999999999


Q ss_pred             hhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          565 DALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       565 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ..++.... ....+++..+..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence            98875422 3456899999999999999999999987   99999999999999999999999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.90  E-value=6.2e-23  Score=216.80  Aligned_cols=141  Identities=29%  Similarity=0.368  Sum_probs=122.6

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHH-HHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVM-VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||+||+++.. +|+.+|||++.+..   ....+++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            36999999999999875 68999999986532   233455666665 46778999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|..++..   ...+++.....++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            999988843   456899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.90  E-value=5.9e-23  Score=216.53  Aligned_cols=141  Identities=34%  Similarity=0.476  Sum_probs=125.2

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+++.. +++.||||.+.+.   .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            37999999999999976 6889999998653   233456778898888877 699999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590          81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            999998853   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=5.8e-23  Score=212.25  Aligned_cols=151  Identities=32%  Similarity=0.536  Sum_probs=131.1

Q ss_pred             cCcccceeeccCCcEEEEEEEe-----cCCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|++.+.||+|+||.||+|..     ..+..+|+|.+.... .+...+|.+|+.++++++|+||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            3567779999999999999985     246789999996432 3345788999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC
Q 006347          555 IYEYMPNRSLDALLFDPL--------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~  620 (649)
                      ||||+++++|.+++....              ....+++...+.++.|++.||.|||+.+   |+||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            999999999999985321              1235789999999999999999999987   99999999999999999


Q ss_pred             ceEEEecCCceeeC
Q 006347          621 NPKISDFGMAKIFG  634 (649)
Q Consensus       621 ~~Ki~DFGla~~~~  634 (649)
                      .+||+|||+++.+.
T Consensus       162 ~~kl~dfg~~~~~~  175 (283)
T cd05090         162 HVKISDLGLSREIY  175 (283)
T ss_pred             cEEecccccccccc
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.89  E-value=6.6e-23  Score=216.14  Aligned_cols=141  Identities=30%  Similarity=0.369  Sum_probs=121.7

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHH-HHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVM-VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+++.. +++.+|+|.+.+..   ....+++..|.. +++.++|+||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            37999999999999986 68899999986432   223345556654 57888999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|..++..   ...++......++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            999888843   355788888899999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.8e-23  Score=211.81  Aligned_cols=149  Identities=30%  Similarity=0.420  Sum_probs=131.6

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +|+..+.||+|+||+||++... +++.||||.+....   ......+.+|+.++++++|+||+++++.+.+++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4777899999999999999875 68899999986432   2234567889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++|+|.+++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            99999999888642 3346899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=9.5e-23  Score=207.96  Aligned_cols=150  Identities=31%  Similarity=0.505  Sum_probs=135.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|++.+.||+|++|.||+|...+++.||||.++.. ....+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            4568888999999999999999887889999998653 345678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++.... ...+++..+..++.+++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            9999999996532 346899999999999999999999987   9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=7.7e-23  Score=221.43  Aligned_cols=140  Identities=22%  Similarity=0.314  Sum_probs=125.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.++||+|+||.||++... +++.||||...      .+.+.+|+.++++++|||||++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            56899999999999999999875 68899999653      245788999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      . ++|..++..   ...+++.+++.|+.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+..
T Consensus       166 ~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        166 K-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             C-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            5 788888743   346889999999999999999999987   999999999999999999999999999864

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.89  E-value=4.8e-23  Score=219.35  Aligned_cols=161  Identities=31%  Similarity=0.470  Sum_probs=140.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc---cHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ---GLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~  553 (649)
                      ....|.+.++||+|.||.||+++.+ +|+.+|+|.+.+....   ....+.+|+.+|+++. |||||.+.+.+.+.+..+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            3456888899999999999999987 5999999999765433   3468999999999998 999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC----CceEEEecCC
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE----LNPKISDFGM  629 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~----~~~Ki~DFGl  629 (649)
                      +|||++.+|.|.+.+...    .+++.+...++.||+.++.|||+.+   |+||||||+|+|+...    +.+|++|||+
T Consensus       113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999999999998653    3899999999999999999999987   9999999999999643    4799999999


Q ss_pred             ceeeCCCCCccccCceeecC
Q 006347          630 AKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       630 a~~~~~~~~~~~~~~~~GT~  649 (649)
                      |+.... .  .....++|||
T Consensus       186 a~~~~~-~--~~~~~~~Gtp  202 (382)
T KOG0032|consen  186 AKFIKP-G--ERLHTIVGTP  202 (382)
T ss_pred             ceEccC-C--ceEeeecCCc
Confidence            999876 2  2344578875

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=5.4e-23  Score=210.04  Aligned_cols=145  Identities=43%  Similarity=0.702  Sum_probs=127.0

Q ss_pred             cceeeccCCcEEEEEEEec-----CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          485 LSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~-----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.+.||+|.||.||+|.+.     .+..|+||.++.. .....++|.+|++.+.+++||||++++|+|.+.+..++||||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4579999999999999987     3568999999653 233578999999999999999999999999988889999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++|+|.++|... ....+++..+..|+.||++||+|||+.+   ++|+||+++|||+++++.+||+|||+++..
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            9999999999753 2456899999999999999999999987   999999999999999999999999999987

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.89  E-value=7.3e-23  Score=208.18  Aligned_cols=148  Identities=31%  Similarity=0.538  Sum_probs=132.7

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||++...++..+|+|.+... ....++|.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            357778899999999999999988889999988643 3345789999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +|+|.+++...  ...+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++...
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccC
Confidence            99999998642  235899999999999999999999987   9999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=7.1e-24  Score=223.05  Aligned_cols=163  Identities=28%  Similarity=0.459  Sum_probs=142.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe-EEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE-KMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~  556 (649)
                      ++|...+.+|+|+||.++..+.+ +...+++|.+.-.  .....+...+|+.++++++|||||.+.+.+++++. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            46777899999999999988876 5778999988643  34455678999999999999999999999999888 89999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||++||+|.+.|.+. +...+++..+..++.|++.|+.|||++.   |+|||||+.||++..+..+||.|||+||+++.+
T Consensus        84 ~Y~eGg~l~~~i~~~-k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQ-KGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             eecCCCCHHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            999999999999763 3466889999999999999999999877   999999999999999999999999999999776


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      ...+  .+++|||
T Consensus       160 ~~~a--~tvvGTp  170 (426)
T KOG0589|consen  160 DSLA--STVVGTP  170 (426)
T ss_pred             hhhh--heecCCC
Confidence            5333  3489986

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=4.6e-23  Score=229.63  Aligned_cols=171  Identities=20%  Similarity=0.274  Sum_probs=139.5

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-  550 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-  550 (649)
                      +.....++|.+.+.||+|+||+||++... +++.||||.+...  .......+.+|+.++..++|+|+++++..+...+ 
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            33445578999999999999999999865 7899999998643  2345567889999999999999999988776433 


Q ss_pred             -------eEEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          551 -------EKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       551 -------~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                             ..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCE
Confidence                   3579999999999999986532 2356889999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeCCCCCccccCceeec
Q 006347          623 KISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       623 Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      ||+|||+++.+.............||
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt  208 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGT  208 (496)
T ss_pred             EEEecccCeeccccccccccccccCC
Confidence            99999999987543332222334454

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.89  E-value=9.2e-23  Score=216.30  Aligned_cols=150  Identities=27%  Similarity=0.355  Sum_probs=132.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||.||++... ++..+|+|.+.... ......+.+|++++.+++|+||+++++++.++++.++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            367888999999999999999987 68889999886532 2344678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++++|.+++..   ...+++.....++.+++.||.|||+.+  +|+||||||+|||+++++.+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            9999999999853   345888999999999999999999742  39999999999999999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=7.1e-23  Score=217.09  Aligned_cols=146  Identities=23%  Similarity=0.452  Sum_probs=126.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  553 (649)
                      +|++.+.||+|+||.||+|... +++.||||++...  ......++.+|+.++++++||||+++++++...+     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4778899999999999999976 6899999998643  2234567889999999999999999999986543     479


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||++ ++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 689888843   346899999999999999999999987   999999999999999999999999999875


Q ss_pred             C
Q 006347          634 G  634 (649)
Q Consensus       634 ~  634 (649)
                      .
T Consensus       154 ~  154 (338)
T cd07859         154 F  154 (338)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA02988 hypothetical protein; Provisional

Probab=99.89  E-value=9.5e-23  Score=211.14  Aligned_cols=157  Identities=18%  Similarity=0.330  Sum_probs=131.5

Q ss_pred             CCCCCCHHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccccccc---HHHHHHHHHHHhcCCCCCccceE
Q 006347          467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG---LEEFMNEVMVISKLQHRNLVRLL  543 (649)
Q Consensus       467 ~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~  543 (649)
                      ++...+.+++.     ......|++|++|.||+|.+. |+.||||+++......   .+.|.+|+.++.+++|||||+++
T Consensus        11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~   84 (283)
T PHA02988         11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY   84 (283)
T ss_pred             cceecCHHHcC-----CCCCeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            34445555552     222357999999999999984 8999999997643322   46788999999999999999999


Q ss_pred             EEEEe----CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcC
Q 006347          544 GCCVE----GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       544 g~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~  618 (649)
                      |++.+    ....++||||+++|+|.+++..   ...+++....+++.+++.||.|||+. +   ++||||||+|||+++
T Consensus        85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~  158 (283)
T PHA02988         85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTE  158 (283)
T ss_pred             eeEEecccCCCceEEEEEeCCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECC
Confidence            99987    3467899999999999999954   35689999999999999999999984 4   789999999999999


Q ss_pred             CCceEEEecCCceeeCC
Q 006347          619 ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~  635 (649)
                      ++.+||+|||+++.+..
T Consensus       159 ~~~~kl~dfg~~~~~~~  175 (283)
T PHA02988        159 NYKLKIICHGLEKILSS  175 (283)
T ss_pred             CCcEEEcccchHhhhcc
Confidence            99999999999997643

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=1e-22  Score=210.35  Aligned_cols=150  Identities=35%  Similarity=0.632  Sum_probs=132.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-----CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-----~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  553 (649)
                      ++|++.+.||+|+||.||++...     ++..||||++........+.|.+|++++.+++|+||+++++++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            46778899999999999999753     5789999999766666678899999999999999999999987643  4678


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++.+.  ...+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            999999999999998542  345899999999999999999999987   999999999999999999999999999976


Q ss_pred             CC
Q 006347          634 GG  635 (649)
Q Consensus       634 ~~  635 (649)
                      ..
T Consensus       159 ~~  160 (284)
T cd05081         159 PQ  160 (284)
T ss_pred             cC
Confidence            43

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.89  E-value=8.3e-23  Score=208.28  Aligned_cols=150  Identities=34%  Similarity=0.578  Sum_probs=135.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.++||+|+||.||+|...++..||+|.+... ....+.+.+|+.++++++|+||+++++.+.+++..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            568888999999999999999888889999998653 3346789999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++... ....+++..+..++.|+++||+|||+.+   ++||||||+||++++++.+||+|||+++.+..
T Consensus        85 ~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          85 KGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             CCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCC
Confidence            99999998643 2345889999999999999999999987   99999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.3e-23  Score=209.92  Aligned_cols=149  Identities=28%  Similarity=0.510  Sum_probs=130.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecc--cccccHHHHHHHHHHHhcCCCCCccceEEEEEe-----CCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-----GEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----~~~~  552 (649)
                      ..|...+.||+|++|.|.++... +|+.||||++..  ......++..+|+.+++.++|+||+.+...+..     -+..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            44555689999999999999876 789999999973  344567889999999999999999999998875     3467


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      |+|+|+| .-+|...++.   +..|+......++.|+++||.|+|+.+   |+||||||+|+|++.+...||+||||||.
T Consensus       102 YiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen  102 YLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             EEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceee
Confidence            9999999 6689999843   345888899999999999999999998   99999999999999999999999999999


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      ....
T Consensus       175 ~~~~  178 (359)
T KOG0660|consen  175 LDKF  178 (359)
T ss_pred             cccc
Confidence            8643

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.89  E-value=5.4e-23  Score=222.97  Aligned_cols=154  Identities=30%  Similarity=0.462  Sum_probs=131.6

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCC-CCCccceEEEEEeC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEG  549 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~  549 (649)
                      ...++|.+.++||+|+||.||+|++.      .+..||||+++.... ...+.+.+|+.++.++. |+|||+++++|.+.
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~  113 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG  113 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence            34456777899999999999999864      346899999975432 23457899999999997 99999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCC---------------------------------------------------------
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPL---------------------------------------------------------  572 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------  572 (649)
                      ...++||||+++|+|.++++...                                                         
T Consensus       114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (401)
T cd05107         114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ  193 (401)
T ss_pred             CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence            99999999999999999986421                                                         


Q ss_pred             --------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcE
Q 006347          573 --------------------------------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI  614 (649)
Q Consensus       573 --------------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NI  614 (649)
                                                            ....+++.....++.|++.||+|||+.+   |+||||||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~Ni  270 (401)
T cd05107         194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNV  270 (401)
T ss_pred             cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceE
Confidence                                                  1124678888999999999999999876   99999999999


Q ss_pred             EEcCCCceEEEecCCceeeC
Q 006347          615 LLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       615 Ll~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++++.+||+|||+++.+.
T Consensus       271 Ll~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         271 LICEGKLVKICDFGLARDIM  290 (401)
T ss_pred             EEeCCCEEEEEecCcceecc
Confidence            99999999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.89  E-value=1.1e-22  Score=215.26  Aligned_cols=141  Identities=28%  Similarity=0.371  Sum_probs=125.6

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||++... +++.+|||++++..   ....+.+..|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            37999999999999876 57899999997532   23456788999999888 699999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|..++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~  146 (327)
T cd05617          81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEG  146 (327)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceec
Confidence            999988843   356899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.89  E-value=1.3e-22  Score=233.46  Aligned_cols=150  Identities=25%  Similarity=0.406  Sum_probs=132.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.++||+|+||.||+|... +++.||||++....   ....++|.+|++++++++||||+++++++.+++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57888999999999999999876 58999999986532   223467999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          557 EYMPNRSLDALLFDPL--------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      ||+++++|.+++....        ....+++..++.++.||++||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            9999999999985311        1234677888999999999999999987   9999999999999999999999999


Q ss_pred             Cceee
Q 006347          629 MAKIF  633 (649)
Q Consensus       629 la~~~  633 (649)
                      +|+..
T Consensus       159 LAk~i  163 (932)
T PRK13184        159 AAIFK  163 (932)
T ss_pred             cceec
Confidence            99987

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.89  E-value=1.4e-22  Score=213.39  Aligned_cols=141  Identities=34%  Similarity=0.444  Sum_probs=123.9

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+|... +++.||||.++...   ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            37999999999999976 57899999987532   23445677788888765 899999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|.+++..   ...+++.+...++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            999999853   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.3e-22  Score=223.03  Aligned_cols=145  Identities=23%  Similarity=0.306  Sum_probs=128.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ...|.+.+.||+|+||.||++... .++.||||...      ...+.+|++++++++|+|||++++++..++..++|||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            457889999999999999999987 57889999642      23467899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      + .++|.+++...  ...++|..++.|+.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus       242 ~-~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        242 Y-RSDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            9 47888887542  346899999999999999999999987   999999999999999999999999999987543

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.89  E-value=1.7e-22  Score=206.68  Aligned_cols=148  Identities=28%  Similarity=0.471  Sum_probs=133.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.++||+|+||.||+|+.. +++.+|+|++..........+.+|+.++.+++|+||+++++.+..++..++||||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            46888899999999999999974 68899999987554455667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          89 GGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            99999999853   346889999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=1.6e-22  Score=211.85  Aligned_cols=148  Identities=28%  Similarity=0.464  Sum_probs=129.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.++||+|+||.||+|+.. +++.||||.++... ......+.+|+.++++++|+||+++++++.+++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            46888899999999999999876 67889999986443 23345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++ +|.+++...  ...+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus        86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecC
Confidence            975 888887542  345788999999999999999999987   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.89  E-value=1e-22  Score=208.72  Aligned_cols=144  Identities=28%  Similarity=0.444  Sum_probs=123.5

Q ss_pred             eeeccCCcEEEEEEEecC---CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD---GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~---g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      ++||+|+||.||+|....   ...+|+|.+.... .....+|.+|+.+++.++|+||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997653   3568888875432 234567889999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLK--KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|.+++.....  ....++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEecccccccc
Confidence            99999965322  233567888899999999999999987   999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.89  E-value=1.2e-22  Score=213.68  Aligned_cols=141  Identities=34%  Similarity=0.450  Sum_probs=124.0

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+++.. +++.||||.+++..   ....+.+..|..++... +|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            47999999999999986 68899999987532   23456677788888765 899999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|.+++..   ...+++.....++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence            999998843   346889999999999999999999987   999999999999999999999999999853

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=1.4e-22  Score=207.28  Aligned_cols=149  Identities=33%  Similarity=0.580  Sum_probs=132.7

Q ss_pred             cCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|....    ...||||.++... .....+|.+|+.++.+++|+||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            568888999999999999998752    4579999986543 33456899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   |+|+||||+|||+++++.+||+|||+++.+.
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          84 TEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            9999999999998542  346899999999999999999999987   9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=1.5e-22  Score=206.23  Aligned_cols=148  Identities=30%  Similarity=0.564  Sum_probs=132.6

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +|++.+.||+|+||+||++...++..+|||.+... .....+|.+|+.++.+++||||+++++++.+.+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            47778899999999999999887778999998643 33457899999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++|.+++...  ...+++..++.++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++....
T Consensus        84 ~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          84 GCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            9999998642  236899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.89  E-value=1e-22  Score=209.80  Aligned_cols=153  Identities=32%  Similarity=0.533  Sum_probs=131.8

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ..++|++.++||+|+||.||+|...      .+..||||++.... .....+|.+|+.+++.++|+||+++++++.++..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567899999999999999999753      35679999986432 2345678999999999999999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK-------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      .++||||+++++|.+++.+...       ...+++..+..++.|+++||+|||+.+   ++|+||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            9999999999999999854211       234688899999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeC
Q 006347          625 SDFGMAKIFG  634 (649)
Q Consensus       625 ~DFGla~~~~  634 (649)
                      +|||+++.+.
T Consensus       161 ~dfg~~~~~~  170 (277)
T cd05062         161 GDFGMTRDIY  170 (277)
T ss_pred             CCCCCccccC
Confidence            9999998653

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.89  E-value=6.2e-23  Score=209.09  Aligned_cols=152  Identities=34%  Similarity=0.566  Sum_probs=138.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +..+|++.++||+|+||.||+|...+++.+|+|.+.........++..|+.++++++|+||+++++++.+.+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34568888999999999999999988999999999776555677899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++.+. ....+++..+..++.+++.||.|||+.+   |+|+||||+||++++++.+||+|||+++.+.
T Consensus        84 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148          84 MEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             cccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcC
Confidence            9999999999653 3456899999999999999999999987   9999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.89  E-value=1.6e-22  Score=213.61  Aligned_cols=141  Identities=28%  Similarity=0.354  Sum_probs=120.7

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHH-HHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVM-VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||++... +++.+|+|.+.+..   ....+++..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            37999999999999976 57889999986432   223344555544 56788999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|.+++..   ...+.......++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+..
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            999999853   345778888889999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.89  E-value=1.6e-23  Score=190.87  Aligned_cols=148  Identities=26%  Similarity=0.487  Sum_probs=128.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..++||+|.+|+||||+.. +++.||+|+++-.  .+.-....++|+.+++.++|+|||+++.....+...-||+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            3455689999999999999976 5788999988643  233346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      | ..+|..|...  -++.++......++.|+.+||.|+|++.   +.|||+||+|.|++.+++.|++|||+||-++-
T Consensus        83 c-dqdlkkyfds--lng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   83 C-DQDLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             h-hHHHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            9 4578777632  3567899999999999999999999998   99999999999999999999999999998754

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=1.6e-22  Score=209.74  Aligned_cols=151  Identities=34%  Similarity=0.604  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|.+.+.||+|+||.||++...      ++..+|+|.+........+.+.+|++++.+++|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            46788899999999999999742      345799999876555567789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          555 IYEYMPNRSLDALLFDPL----------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      ||||+++++|.+++....          +...+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            999999999999986321          2235899999999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeC
Q 006347          625 SDFGMAKIFG  634 (649)
Q Consensus       625 ~DFGla~~~~  634 (649)
                      +|||+++.+.
T Consensus       162 ~dfg~~~~~~  171 (288)
T cd05093         162 GDFGMSRDVY  171 (288)
T ss_pred             ccCCcccccc
Confidence            9999998664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.89  E-value=2.9e-22  Score=207.72  Aligned_cols=150  Identities=28%  Similarity=0.485  Sum_probs=124.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec--CCcEEEEEEecccc--cccHHHHHHHHHHHhcC---CCCCccceEEEEEe-----
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKL---QHRNLVRLLGCCVE-----  548 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----  548 (649)
                      ++|++.+.||+|+||.||+|+..  +++.||||+++...  ......+.+|+.++..+   +||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888899999999999999863  46889999886432  22334667787777665   69999999999863     


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      ....++||||++ ++|.+++... ....+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence            345899999996 6899888543 2345899999999999999999999987   9999999999999999999999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +++....
T Consensus       156 ~~~~~~~  162 (290)
T cd07862         156 LARIYSF  162 (290)
T ss_pred             ceEeccC
Confidence            9998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.89  E-value=1.3e-22  Score=216.05  Aligned_cols=151  Identities=30%  Similarity=0.454  Sum_probs=128.2

Q ss_pred             cCcccceeeccCCcEEEEEEEe------cCCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeC-Ce
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG-EE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~------~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~  551 (649)
                      ++|++.+.||+|+||.||+|..      .+++.||||+++... ....+.+.+|+.++.++ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            5688889999999999999973      356789999996533 23456788999999999 789999999988754 46


Q ss_pred             EEEEEecCCCCChhhhhcCCCC----------------------------------------------------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK----------------------------------------------------------  573 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  573 (649)
                      .++||||+++|+|.+++.....                                                          
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            7899999999999999853210                                                          


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          574 ------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       574 ------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                            ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIY  230 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccc
Confidence                  124688889999999999999999987   9999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.89  E-value=1.8e-22  Score=206.93  Aligned_cols=145  Identities=31%  Similarity=0.446  Sum_probs=125.0

Q ss_pred             eeeccCCcEEEEEEEecC---CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD---GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~---g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.||+|+||.||+|...+   +..+|+|.++... ......+.+|+.++++++|+||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999998653   4579999886543 234467899999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          563 SLDALLFDPL--KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       563 sL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +|.+++....  .....++..+..++.|+++||+|||+.+   ++||||||+||++++++++||+|||+++...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCcccccccc
Confidence            9999986432  1234677888899999999999999987   9999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.89  E-value=1.9e-22  Score=217.15  Aligned_cols=147  Identities=26%  Similarity=0.430  Sum_probs=128.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  553 (649)
                      +|++.+.||+|+||.||++... +++.||||++...  .....+++.+|+.+++.++|+||+++++++.+.+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            4677899999999999999975 7899999998643  2234567899999999999999999999998876     789


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|+||+. ++|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+..
T Consensus        81 lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999996 578777743   456899999999999999999999987   999999999999999999999999999976


Q ss_pred             CC
Q 006347          634 GG  635 (649)
Q Consensus       634 ~~  635 (649)
                      ..
T Consensus       154 ~~  155 (372)
T cd07853         154 EP  155 (372)
T ss_pred             cc
Confidence            43

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.4e-23  Score=202.75  Aligned_cols=164  Identities=29%  Similarity=0.400  Sum_probs=139.1

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----c---ccHHHHHHHHHHHhcC-CCCCccceEEEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----G---QGLEEFMNEVMVISKL-QHRNLVRLLGCC  546 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~---~~~~~f~~E~~~l~~l-~H~niv~l~g~~  546 (649)
                      +..-++|...+.||+|..+.|-++.++ +|.+.|+|++....     +   .-.++-+.|+.+|+++ .||+|+++..++
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            334456777889999999999998776 78899999986321     1   1235567899999999 699999999999


Q ss_pred             EeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEe
Q 006347          547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISD  626 (649)
Q Consensus       547 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~D  626 (649)
                      ..+...++|+|.|+.|.|.++|.   +.-.+++++..+|++|+..|+.|||...   ||||||||+|||+|++.++||+|
T Consensus        93 es~sF~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD  166 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD  166 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence            99999999999999999999994   4567899999999999999999999988   99999999999999999999999


Q ss_pred             cCCceeeCCCCCccccCceeecC
Q 006347          627 FGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       627 FGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      ||+|..+.....   ...+.|||
T Consensus       167 FGFa~~l~~Gek---LrelCGTP  186 (411)
T KOG0599|consen  167 FGFACQLEPGEK---LRELCGTP  186 (411)
T ss_pred             cceeeccCCchh---HHHhcCCC
Confidence            999999865543   23356664

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.89  E-value=2.5e-22  Score=211.60  Aligned_cols=141  Identities=35%  Similarity=0.448  Sum_probs=125.3

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||+||++... +++.+|||.+++..   ......+..|.+++..+ +|+||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999886 57899999997532   33456778899999888 799999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|..++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  146 (318)
T cd05570          81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEG  146 (318)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeec
Confidence            999988843   346899999999999999999999987   999999999999999999999999999863

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=1.6e-22  Score=209.64  Aligned_cols=153  Identities=29%  Similarity=0.503  Sum_probs=130.8

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ..++|++.+.||+|+||.||+|...      .+..||+|.+.... .....++.+|+.++++++|+||+++++++.+++.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            3467888999999999999999753      24589999886433 2334578899999999999999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK-------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      .++||||+++|+|.+++.....       ...+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            9999999999999999964211       234577888999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeC
Q 006347          625 SDFGMAKIFG  634 (649)
Q Consensus       625 ~DFGla~~~~  634 (649)
                      +|||+++.+.
T Consensus       161 ~Dfg~~~~~~  170 (288)
T cd05061         161 GDFGMTRDIY  170 (288)
T ss_pred             CcCCcccccc
Confidence            9999998653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=1.4e-22  Score=208.63  Aligned_cols=141  Identities=27%  Similarity=0.417  Sum_probs=121.8

Q ss_pred             eeccCCcEEEEEEEecC-------------------------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccce
Q 006347          488 KLGQGGFGPVYWGRLKD-------------------------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL  542 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~~-------------------------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l  542 (649)
                      +||+|+||.||+|.+..                         ...||+|.+........++|.+|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997521                         13589999876544456789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC--
Q 006347          543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL--  620 (649)
Q Consensus       543 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~--  620 (649)
                      +++|.++...++||||+++|+|+.++..  ....+++..+..++.||++||+|||+.+   |+||||||+|||+++.+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence            9999999999999999999999999854  2346889999999999999999999887   99999999999998654  


Q ss_pred             -----ceEEEecCCceee
Q 006347          621 -----NPKISDFGMAKIF  633 (649)
Q Consensus       621 -----~~Ki~DFGla~~~  633 (649)
                           .+|++|||+++..
T Consensus       157 ~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             cCccceeeecCCcccccc
Confidence                 3799999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=1.1e-22  Score=217.03  Aligned_cols=151  Identities=30%  Similarity=0.482  Sum_probs=134.5

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ....|.+...||.|.|++|..+++. ++.+||||.+++..  ....+.+.+|+++|..++|||||+++.+.......|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            3467888899999999999999876 79999999998753  23446689999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+.+|.+.+||...   ......+...+..|+.+|++|||.++   |+|||||++||||+.++++||+|||++..+..
T Consensus       134 ~eya~~ge~~~yl~~~---gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKH---GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EEeccCchhHHHHHhc---ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc
Confidence            9999999999999643   34455777788999999999999998   99999999999999999999999999998853

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.88  E-value=2.5e-22  Score=207.25  Aligned_cols=149  Identities=32%  Similarity=0.538  Sum_probs=126.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|++.+.||+|+||.||+|... +++    .+++|.+..... ...+++..|+..++++.|+||+++++++. +...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            35677789999999999999874 344    478888754322 34467888898999999999999999875 455789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++||+++|+|.+++..  ....+++..+..++.||+.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        86 i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            9999999999999964  2346899999999999999999999987   9999999999999999999999999999764


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       161 ~  161 (279)
T cd05111         161 P  161 (279)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.6e-22  Score=210.35  Aligned_cols=151  Identities=30%  Similarity=0.513  Sum_probs=129.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecC---------------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD---------------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLG  544 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~---------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g  544 (649)
                      ++|++.++||+|+||.||++...+               ...||||.+.... ......|.+|++++.+++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            568888999999999999987542               2358999986542 334567999999999999999999999


Q ss_pred             EEEeCCeEEEEEecCCCCChhhhhcCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          545 CCVEGEEKMLIYEYMPNRSLDALLFDPL---------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       545 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                      ++...+..++||||+++++|.+++....         ....+++..++.++.|+++||+|||+.+   ++||||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence            9999999999999999999999985421         1124788999999999999999999987   999999999999


Q ss_pred             EcCCCceEEEecCCceeeC
Q 006347          616 LDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++.+||+|||+++.+.
T Consensus       162 l~~~~~~kl~dfg~~~~~~  180 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLY  180 (295)
T ss_pred             EcCCCcEEecccccccccc
Confidence            9999999999999998653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.88  E-value=2.1e-22  Score=207.38  Aligned_cols=151  Identities=30%  Similarity=0.581  Sum_probs=132.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecC------CcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|.+.+.||+|+||.||+|...+      ++.||||.++..... ..+.|.+|++++.+++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457778899999999999998643      478999998765443 4578999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          554 LIYEYMPNRSLDALLFDPL-----------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      +||||+++++|.+++....           ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence            9999999999999996421           2345789999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeC
Q 006347          623 KISDFGMAKIFG  634 (649)
Q Consensus       623 Ki~DFGla~~~~  634 (649)
                      ||+|||+++.+.
T Consensus       162 kl~d~g~~~~~~  173 (280)
T cd05049         162 KIGDFGMSRDVY  173 (280)
T ss_pred             EECCcccceecc
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.88  E-value=3e-22  Score=205.07  Aligned_cols=156  Identities=30%  Similarity=0.405  Sum_probs=134.8

Q ss_pred             HHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       476 l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++.+++++.....||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++|+||+++++++.+++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            3455667777789999999999999865 678899999876655667889999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~  633 (649)
                      |+||+++++|.+++.........++..+..++.||++||+|||+.+   |+||||||+||+++. ++.+||+|||++..+
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            9999999999999964322212278888899999999999999887   999999999999986 679999999999876


Q ss_pred             C
Q 006347          634 G  634 (649)
Q Consensus       634 ~  634 (649)
                      .
T Consensus       160 ~  160 (268)
T cd06624         160 A  160 (268)
T ss_pred             c
Confidence            4

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.88  E-value=3e-22  Score=230.65  Aligned_cols=149  Identities=30%  Similarity=0.439  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.++||+|+||.||+|... +++.||||+++...   ......+..|+.++..++|+||+++++++.+.+..+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            57888999999999999999987 68899999986532   223467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++..   ...+++...+.|+.||+.||.|||..+   ||||||||+|||++.++.+||+|||+++....
T Consensus        84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence            99999999999853   345788999999999999999999987   99999999999999999999999999997643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.5e-22  Score=204.40  Aligned_cols=147  Identities=31%  Similarity=0.542  Sum_probs=131.6

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +|++.+.||+|+||.||++...++..+|+|.+.+. .....+|.+|+.++++++|+||+++++++.+.+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            46777899999999999999887778999988643 23456788999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++|.+++...  ...+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++...
T Consensus        84 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059          84 GCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecc
Confidence            9999998642  236899999999999999999999987   9999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.88  E-value=2.8e-22  Score=208.22  Aligned_cols=152  Identities=30%  Similarity=0.557  Sum_probs=133.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|.+.+.||+|+||.||+++..      ++..+++|.+........+.+.+|++++++++|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            35777889999999999999743      345799999876555566789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          555 IYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      ||||+++++|.+++....             ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            999999999999986421             1235899999999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeCC
Q 006347          622 PKISDFGMAKIFGG  635 (649)
Q Consensus       622 ~Ki~DFGla~~~~~  635 (649)
                      +||+|||+++....
T Consensus       162 ~~l~dfg~a~~~~~  175 (291)
T cd05094         162 VKIGDFGMSRDVYS  175 (291)
T ss_pred             EEECCCCcccccCC
Confidence            99999999986543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.8e-22  Score=212.27  Aligned_cols=139  Identities=29%  Similarity=0.350  Sum_probs=120.4

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC---CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL---QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ||+|+||+||+|+.. +++.||||++.+..   ......+..|..++.+.   +||||++++..+.+.+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999876 68999999986432   12334455677766655   699999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586          81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            999988843   456899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=1.5e-22  Score=206.50  Aligned_cols=149  Identities=29%  Similarity=0.364  Sum_probs=133.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-CcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|.-|+||.+++.+ +..+|+|++.+..   .+...+...|.+||+.+.||.++.|++.+..+...+|||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            346667899999999999999984 5899999998653   445567788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||+||+|...+.+ +..+.++...+..+|.+|.-||+|||-.+   ||.|||||+||||-++|++.++||.|+...
T Consensus       157 eyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             ecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccC
Confidence            99999999988865 45667899999999999999999999887   999999999999999999999999998765

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.88  E-value=2.8e-22  Score=205.57  Aligned_cols=152  Identities=32%  Similarity=0.510  Sum_probs=132.8

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeC------
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG------  549 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~------  549 (649)
                      .+++.|+..+.||+|+||.||+|... +++.||+|.+... .....++..|+.++.++ +|+||+++++++.+.      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            45677888899999999999999876 5889999998653 34557889999999998 799999999998863      


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ...++||||+++++|.+++... ....+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence            4578999999999999998642 3346899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      ++.+.
T Consensus       158 ~~~~~  162 (272)
T cd06637         158 SAQLD  162 (272)
T ss_pred             ceecc
Confidence            98764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=3.4e-22  Score=204.96  Aligned_cols=148  Identities=31%  Similarity=0.577  Sum_probs=125.1

Q ss_pred             ccceeeccCCcEEEEEEEecC-Cc--EEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------eE
Q 006347          484 QLSSKLGQGGFGPVYWGRLKD-GQ--EIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------EK  552 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~~-g~--~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~  552 (649)
                      .+.+.||+|+||.||+|+... +.  .+|||.++..  .....+.+..|+.++.+++|+||+++++++.+..      ..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456799999999999999764 32  6899988643  2345678899999999999999999999986432      46


Q ss_pred             EEEEecCCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          553 MLIYEYMPNRSLDALLFDP---LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ++||||+++|+|.+++...   .....+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence            8999999999999887421   12345899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      ++.+.
T Consensus       159 ~~~~~  163 (272)
T cd05075         159 SKKIY  163 (272)
T ss_pred             ccccC
Confidence            99764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.88  E-value=5.6e-22  Score=207.84  Aligned_cols=149  Identities=27%  Similarity=0.334  Sum_probs=131.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||++... ++..+|+|.+.... .....++.+|++++.+++||||+++++.+.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36888899999999999999876 67889999886432 23446788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++..   ...+++..+..++.|+++||.|||+..  +++||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          81 MDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            999999999954   356889999999999999999999742  39999999999999999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.88  E-value=4.6e-22  Score=207.39  Aligned_cols=149  Identities=28%  Similarity=0.465  Sum_probs=134.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .+|++.+.||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            56888899999999999999964 78999999997655555677899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++++|.+++.+    ..+++..+..++.+++.||.|||+.+   |+||||||+||++++++.+||+|||+++.....
T Consensus        99 ~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~  168 (297)
T cd06656          99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (297)
T ss_pred             CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence            99999999843    45789999999999999999999987   999999999999999999999999999876433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.88  E-value=3.7e-22  Score=206.04  Aligned_cols=151  Identities=34%  Similarity=0.591  Sum_probs=131.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecC------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||.||+|....      ...||+|.+.... .....+|.+|+.++.+++|+||+++++++.+....+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            357778999999999999998652      2579999986433 234567899999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC
Q 006347          554 LIYEYMPNRSLDALLFDPLK-------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~  620 (649)
                      ++|||+++++|.+++.....             ...+++...+.++.|++.||+|||+.+   ++|+||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence            99999999999999864211             145889999999999999999999987   99999999999999999


Q ss_pred             ceEEEecCCceeeC
Q 006347          621 NPKISDFGMAKIFG  634 (649)
Q Consensus       621 ~~Ki~DFGla~~~~  634 (649)
                      .+||+|||+++...
T Consensus       162 ~~~L~dfg~~~~~~  175 (283)
T cd05048         162 TVKISDFGLSRDIY  175 (283)
T ss_pred             cEEECCCcceeecc
Confidence            99999999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.88  E-value=5.2e-22  Score=205.00  Aligned_cols=147  Identities=30%  Similarity=0.490  Sum_probs=132.3

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      |++.++||+|+||.||+|... ++..+++|.+........+.+.+|++++..++|+|++++++++.+++..++||||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            556688999999999999987 5778999998765556677899999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++|..++.+  ....+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  154 (282)
T cd06643          87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNT  154 (282)
T ss_pred             CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccc
Confidence            999988754  2356899999999999999999999987   9999999999999999999999999997653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=3.6e-22  Score=206.21  Aligned_cols=151  Identities=32%  Similarity=0.565  Sum_probs=132.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +++...++||+|+||.||++...      ++..+|+|.+........+.|.+|++++.+++|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            45667789999999999999642      356899999876666667889999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          555 IYEYMPNRSLDALLFDPLK------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      ||||+++++|.+++.....            ...+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            9999999999999864211            135889999999999999999999887   9999999999999999999


Q ss_pred             EEEecCCceeeC
Q 006347          623 KISDFGMAKIFG  634 (649)
Q Consensus       623 Ki~DFGla~~~~  634 (649)
                      ||+|||+++.+.
T Consensus       162 kL~dfg~~~~~~  173 (280)
T cd05092         162 KIGDFGMSRDIY  173 (280)
T ss_pred             EECCCCceeEcC
Confidence            999999998664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=4e-22  Score=203.72  Aligned_cols=150  Identities=33%  Similarity=0.553  Sum_probs=133.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .+|++.++||+|+||.||+|... .++.||+|.+... .....++.+|++++.+++|+||+++++++.+.+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            34777789999999999999876 5889999998653 345678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++... ....+++..++.++.|+++||+|||+.+   ++||||||+||++++++.+||+|||+++....
T Consensus        85 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          85 TYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            999999998542 2346899999999999999999999987   99999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.88  E-value=4.5e-22  Score=207.31  Aligned_cols=148  Identities=28%  Similarity=0.470  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.+.|+||+++++.+.++.+.++||||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            46888899999999999999864 68899999997655556678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++.+    ..+++.++..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus       100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            99999999843    35789999999999999999999987   99999999999999999999999999887543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=3.9e-22  Score=204.22  Aligned_cols=150  Identities=31%  Similarity=0.573  Sum_probs=131.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .+|++.+.||+|+||.||+|...    .+..+|+|.++... ....+.|.+|+.++.+++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            46778899999999999999864    23479999986532 23456899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++...  ...+++.+++.++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            9999999999999542  345899999999999999999999987   99999999999999999999999999997754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.88  E-value=2.1e-22  Score=213.90  Aligned_cols=152  Identities=32%  Similarity=0.481  Sum_probs=128.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccccc-ccHHHHHHHHHHHhcC-CCCCccceEEEEEeC-Ce
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG-EE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~  551 (649)
                      ++|++.+.||+|+||.||+|...      +++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            46888899999999999999643      357899999865332 3346788999999999 899999999988754 56


Q ss_pred             EEEEEecCCCCChhhhhcCCCC----------------------------------------------------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK----------------------------------------------------------  573 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  573 (649)
                      .+++|||+++++|.+++.....                                                          
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            7899999999999999853211                                                          


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       574 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ...++|..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~  225 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  225 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence            136899999999999999999999887   99999999999999999999999999997643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.88  E-value=2.4e-22  Score=207.52  Aligned_cols=151  Identities=32%  Similarity=0.505  Sum_probs=129.7

Q ss_pred             CcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +|.+.++||+|+||.||+|...      ++..||||+++..... ..++|.+|+.++.+++|+||+++++++.+.+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            3566789999999999999864      2478999999754322 34678899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          555 IYEYMPNRSLDALLFDP-------------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      ++||+++++|.+++...             .....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence            99999999999998421             11245889999999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeCC
Q 006347          622 PKISDFGMAKIFGG  635 (649)
Q Consensus       622 ~Ki~DFGla~~~~~  635 (649)
                      +||+|||+++.+..
T Consensus       163 ~kl~Dfg~~~~~~~  176 (283)
T cd05091         163 VKISDLGLFREVYA  176 (283)
T ss_pred             eEeccccccccccc
Confidence            99999999987643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.88  E-value=6.3e-22  Score=205.04  Aligned_cols=148  Identities=29%  Similarity=0.405  Sum_probs=130.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |+..+.||+|+||+||++... +++.+|+|.+....   ....+.+.+|+.++.+++|+|++++.+.+.+++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            566789999999999999876 68899999986432   22345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++...
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            9999999888642 2346899999999999999999999987   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.88  E-value=2.6e-22  Score=208.34  Aligned_cols=155  Identities=28%  Similarity=0.498  Sum_probs=133.7

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      ...++|++.+.||+|+||.||++...      ....+|+|.+... ......++.+|+.++.++ +|+||+++++++.++
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            34456888899999999999999864      2367999998653 233456789999999999 799999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDP-------------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +..++||||+++|+|.+++...             .....+++..++.++.|++.||+|||+.+   |+||||||+||++
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~  165 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV  165 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence            9999999999999999998532             12356899999999999999999999887   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCC
Q 006347          617 DEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++.+||+|||+++.+..
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         166 TEDHVMKIADFGLARDIHH  184 (293)
T ss_pred             cCCCeEEeCcccccccccc
Confidence            9999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.88  E-value=4.1e-22  Score=207.44  Aligned_cols=151  Identities=28%  Similarity=0.508  Sum_probs=130.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-----------------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccce
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-----------------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRL  542 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-----------------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l  542 (649)
                      ++|++.++||+|+||.||++...                 ++..+|+|.+.... ....++|.+|+.++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            56888899999999999998532                 23468999987542 3345789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCChhhhhcCCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcE
Q 006347          543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLK--------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI  614 (649)
Q Consensus       543 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NI  614 (649)
                      ++++.+++..++||||+++++|.+++.....        ...+++.....++.|++.||+|||+.+   ++||||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence            9999999999999999999999999864221        134788899999999999999999987   99999999999


Q ss_pred             EEcCCCceEEEecCCceeeC
Q 006347          615 LLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       615 Ll~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++++.+||+|||+++.+.
T Consensus       162 li~~~~~~~l~dfg~~~~~~  181 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             EEcCCCCEEeccCccccccc
Confidence            99999999999999998763

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=3.2e-23  Score=221.42  Aligned_cols=156  Identities=29%  Similarity=0.476  Sum_probs=132.4

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEec--c--cccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe--EEEEEec
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLS--K--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE--KMLIYEY  558 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~--~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lV~Ey  558 (649)
                      .++||+|+|-+||||... +|.+||--.++  +  ..+...++|..|+++|+.|+|+|||+++..+.+...  .-+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            479999999999999986 57788743222  1  234566899999999999999999999999998776  6799999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~~~  637 (649)
                      |..|+|..|+.+   .+.++.+....|++||++||.|||.+. +||||||||.+||+|+. -|.+||+|+|||+++....
T Consensus       125 ~TSGtLr~Y~kk---~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  125 FTSGTLREYRKK---HRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             ccCCcHHHHHHH---hccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            999999999954   356788999999999999999999985 89999999999999985 5889999999999985433


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                          ..+++|||
T Consensus       201 ----aksvIGTP  208 (632)
T KOG0584|consen  201 ----AKSVIGTP  208 (632)
T ss_pred             ----cceeccCc
Confidence                23489996

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.2e-22  Score=203.44  Aligned_cols=149  Identities=31%  Similarity=0.567  Sum_probs=128.2

Q ss_pred             cccceeeccCCcEEEEEEEecC----CcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe-----
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE-----  551 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----  551 (649)
                      |.+.+.||+|+||.||+|+...    +..||||+++...  .....++.+|+..+++++|+||+++++++.+.+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998752    3679999986432  2345689999999999999999999999877654     


Q ss_pred             -EEEEEecCCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          552 -KMLIYEYMPNRSLDALLFDPL---KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       552 -~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                       .++|+||+++++|..++....   ....+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence             689999999999999985432   2346899999999999999999999987   999999999999999999999999


Q ss_pred             CCceeeC
Q 006347          628 GMAKIFG  634 (649)
Q Consensus       628 Gla~~~~  634 (649)
                      |+++.+.
T Consensus       158 g~~~~~~  164 (273)
T cd05035         158 GLSKKIY  164 (273)
T ss_pred             cceeecc
Confidence            9999764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.88  E-value=4.2e-22  Score=208.20  Aligned_cols=153  Identities=29%  Similarity=0.523  Sum_probs=132.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      ..+|.+.+.||+|+||.||++...        ++..||+|.+.... ....+++.+|+.++..+ +|+||+++++++.+.
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            356788899999999999999742        34579999886432 34567899999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      ...++||||+++++|.+++.+..             ....+++.++..++.||++||.|||+.+   |+||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence            99999999999999999986531             1235789999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCC
Q 006347          617 DEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++.+||+|||+++.+..
T Consensus       171 ~~~~~~kl~D~g~~~~~~~  189 (304)
T cd05101         171 TENNVMKIADFGLARDVNN  189 (304)
T ss_pred             cCCCcEEECCCccceeccc
Confidence            9999999999999997643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=3.8e-22  Score=202.32  Aligned_cols=143  Identities=31%  Similarity=0.556  Sum_probs=127.5

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      +.||+|+||.||+|+.. +++.+|+|.+.... ......|.+|++++++++|+||+++++++.+....++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            47999999999999875 68899999876432 33456799999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .+++..  ....+++.++..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084          81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEE  145 (252)
T ss_pred             HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccc
Confidence            999853  2345899999999999999999999887   9999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.88  E-value=4.4e-22  Score=206.84  Aligned_cols=152  Identities=31%  Similarity=0.526  Sum_probs=132.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC-----------------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccc
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD-----------------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVR  541 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~-----------------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~  541 (649)
                      ..+|++.++||+|+||.||++...+                 +..||+|.+.... ....+++.+|++++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3568888999999999999997652                 2468999987543 235678999999999999999999


Q ss_pred             eEEEEEeCCeEEEEEecCCCCChhhhhcCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCc
Q 006347          542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPL--------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASN  613 (649)
Q Consensus       542 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~N  613 (649)
                      +++++..++..++|+||+++++|.+++.+..        ....+++..++.++.|++.||+|||+.+   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            9999999999999999999999999986532        1236899999999999999999999987   9999999999


Q ss_pred             EEEcCCCceEEEecCCceeeC
Q 006347          614 ILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++++++.+||+|||+++.+.
T Consensus       161 ili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             eeecCCCceEEccccceeecc
Confidence            999999999999999998753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.2e-22  Score=206.22  Aligned_cols=150  Identities=29%  Similarity=0.471  Sum_probs=135.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|.+.+.||+|+||.||++... +++.+|+|.+........+.|..|+.++++++|+||+++++.+.++...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            356888899999999999999976 6889999998765556667899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++.+.  ...+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++....
T Consensus        84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            9999999998542  346899999999999999999999987   9999999999999999999999999987653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=4.5e-22  Score=203.92  Aligned_cols=149  Identities=31%  Similarity=0.580  Sum_probs=131.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CC---cEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DG---QEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g---~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .|++.+.||+|+||.||+|... ++   ..||||.+... .....++|..|+.++++++||||+++++++.++...++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            4677899999999999999875 23   36999998654 3345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence            999999999998542  345899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.88  E-value=4.6e-22  Score=206.36  Aligned_cols=150  Identities=31%  Similarity=0.496  Sum_probs=129.3

Q ss_pred             CcccceeeccCCcEEEEEEEec------CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +|.+.+.||+|+||.||+|+..      ....+|+|.+..... ...+++.+|+.++++++||||+++++.+.+++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4667789999999999999853      235789998865432 345679999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCc
Q 006347          555 IYEYMPNRSLDALLFDPL---------------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASN  613 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~N  613 (649)
                      |+||+++++|.+++....                     ....+++..++.++.|++.||.|||+.+   |+||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            999999999999985321                     1235889999999999999999999887   9999999999


Q ss_pred             EEEcCCCceEEEecCCceeeC
Q 006347          614 ILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++++.+||+|||+++.+.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~  178 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVY  178 (290)
T ss_pred             EEEcCCCcEEecccccccccc
Confidence            999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=4.2e-22  Score=203.76  Aligned_cols=148  Identities=26%  Similarity=0.477  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.++||+|+||.||+++.. +++.+|+|.++.........+.+|+.++..++|+||+++++.+.+++..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            46777889999999999999875 68899999987654455567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++..   ...+++.+...++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.+.
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            99999999843   346899999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.88  E-value=4e-22  Score=205.52  Aligned_cols=153  Identities=29%  Similarity=0.507  Sum_probs=133.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC-----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD-----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~-----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~  552 (649)
                      .++|.+.+.||+|+||.||+|....     +..|++|++.... ....+.+.+|+.++.+++|+||+++++++.+ +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4678888999999999999999765     6889999886542 3346778999999999999999999999887 4678


Q ss_pred             EEEEecCCCCChhhhhcCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          553 MLIYEYMPNRSLDALLFDPLKK-----ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      ++++||+++++|.+++......     ..+++..+..++.+++.||+|||+.+   ++||||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999998643222     46899999999999999999999987   999999999999999999999999


Q ss_pred             CCceeeCC
Q 006347          628 GMAKIFGG  635 (649)
Q Consensus       628 Gla~~~~~  635 (649)
                      |+++.+..
T Consensus       162 g~~~~~~~  169 (280)
T cd05043         162 ALSRDLFP  169 (280)
T ss_pred             CCcccccC
Confidence            99987643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.88  E-value=7.6e-22  Score=200.19  Aligned_cols=150  Identities=30%  Similarity=0.464  Sum_probs=134.1

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|++|.||+++.. +++.+++|.+...  .....+++.+|++++++++|+|++++++++.+++..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4677789999999999999976 6889999988642  234567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++... ....+++..+..++.+++.||.|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~  153 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD  153 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence            9999999999653 2456899999999999999999999887   99999999999999999999999999998754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=3.8e-22  Score=205.14  Aligned_cols=153  Identities=31%  Similarity=0.495  Sum_probs=132.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|.+.+.||+|+||.||+|...      .+..||+|.+.... .....++.+|+.++..++|+||+++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            356888899999999999999865      24689999986443 23456789999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          553 MLIYEYMPNRSLDALLFDPLK-------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      ++||||+++++|.+++.....       ...+++..++.++.|++.||.|||+.+   |+||||||+||++++++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence            999999999999999864221       234789999999999999999999887   9999999999999999999999


Q ss_pred             ecCCceeeCC
Q 006347          626 DFGMAKIFGG  635 (649)
Q Consensus       626 DFGla~~~~~  635 (649)
                      |||+++.+..
T Consensus       162 dfg~~~~~~~  171 (277)
T cd05032         162 DFGMTRDIYE  171 (277)
T ss_pred             Ccccchhhcc
Confidence            9999987643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.2e-22  Score=201.79  Aligned_cols=148  Identities=34%  Similarity=0.615  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||++... ++.||||.++.... ..+++.+|+.++.+++|+||+++++++.+.+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            46778899999999999999876 78999999976543 56789999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|.+++... ....+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||+++...
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          84 KGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccc
Confidence            99999998643 2236899999999999999999999987   9999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.88  E-value=8.1e-22  Score=203.33  Aligned_cols=143  Identities=28%  Similarity=0.416  Sum_probs=125.3

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||.||++... +|+.+|+|.+....   ....+.+..|++++.+++||||+++++.+.++...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999876 68999999986422   12345567799999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      .+++... ....+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence            9888543 3345889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.88  E-value=8.5e-22  Score=204.57  Aligned_cols=148  Identities=31%  Similarity=0.509  Sum_probs=134.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.++||+|+||.||+|+.. +++.+|+|.+........+.+..|+.++++++|+||+++++.+..+...++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            45778899999999999999986 58899999997666666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++++|..++.+  ....+++..+..++.|+++||+|||+.+   ++||||||+||+++.++.+||+|||+++..
T Consensus        92 ~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          92 PGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceec
Confidence            99999888754  2346899999999999999999999887   999999999999999999999999998864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.88  E-value=6e-22  Score=202.43  Aligned_cols=149  Identities=34%  Similarity=0.561  Sum_probs=130.7

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|.+.++||+|+||.||+|+..+...||+|+++.. ....++|.+|+.++.+++|+||+++++++. .+..++||||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            468888999999999999999877778999999753 234568999999999999999999999874 456799999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +|+|.+++... ....+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED  154 (262)
T ss_pred             CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccc
Confidence            99999999642 2345789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.88  E-value=1.2e-21  Score=236.47  Aligned_cols=142  Identities=25%  Similarity=0.516  Sum_probs=123.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ..++..+.||+|+||.||+|+.. ++..||||+++.....    ...|++++++++|||||+++|+|.+.+..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            45677789999999999999974 7899999998653322    234688999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|+|.++++      .++|.++.+|+.|||+||+|||+.+..+|+||||||+||+++.++.+|+. ||+++..
T Consensus       766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            9999999994      38999999999999999999997766779999999999999999998886 7766543

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.88  E-value=4e-22  Score=202.58  Aligned_cols=145  Identities=37%  Similarity=0.604  Sum_probs=129.1

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccccc--HHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQG--LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      |++.+.||+|+||+||++... +++.+|+|.+.......  ......|+.++.+++|+||+++++++.+....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            567789999999999999987 56689999997654322  223456999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++++|.+++.   ....+++..+..++.|+++||+|||+.+   |+|+||||+||++++++.+||+|||.+..+
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccc---cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            9999999995   3456899999999999999999999987   999999999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.88  E-value=7.2e-22  Score=203.64  Aligned_cols=149  Identities=31%  Similarity=0.536  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|...+.||+|+||+||+|+.. +++    .||||.++.. .....+++.+|+.++..++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            46778899999999999999854 444    4899998643 23346788999999999999999999999975 45779


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++||+++|+|.++++..  ...+++..++.++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        86 ~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          86 VTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence            99999999999998642  346899999999999999999999987   9999999999999999999999999999875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       161 ~  161 (279)
T cd05109         161 I  161 (279)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=6.5e-22  Score=204.60  Aligned_cols=150  Identities=32%  Similarity=0.577  Sum_probs=130.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec-----CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  552 (649)
                      +.|++.++||+|+||.||++...     ++..||+|.++... ....+.+.+|+.++++++|+|++++++++.+.  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            34677899999999999999742     57889999986543 33456899999999999999999999999875  568


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence            8999999999999998542  235899999999999999999999987   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       159 ~~~  161 (284)
T cd05079         159 IET  161 (284)
T ss_pred             ccc
Confidence            643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.88  E-value=9.7e-22  Score=202.97  Aligned_cols=149  Identities=32%  Similarity=0.524  Sum_probs=131.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.+.||+|++|.||+|+.. +++.||||++....  ....+.+.+|+.++.+++|+||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4777899999999999999976 68999999986432  23346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.+++........+++..+..++.|+++||+|||+.+   |+|+||||+||++++++.+||+|||+++...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            97 689888855434467899999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.88  E-value=4.8e-22  Score=202.04  Aligned_cols=142  Identities=27%  Similarity=0.478  Sum_probs=123.4

Q ss_pred             eeeccCCcEEEEEEEecCCc-----------EEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          487 SKLGQGGFGPVYWGRLKDGQ-----------EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~-----------~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      +.||+|+||.||+|...+..           .+++|.+...... ..+|.+|+.++++++|+||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            47999999999999986432           5788877544332 6889999999999999999999999988 778999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-------ceEEEecC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-------NPKISDFG  628 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-------~~Ki~DFG  628 (649)
                      |||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence            9999999999999643  226899999999999999999999887   99999999999999888       79999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +++.+..
T Consensus       154 ~a~~~~~  160 (259)
T cd05037         154 IPITVLS  160 (259)
T ss_pred             ccccccc
Confidence            9997543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=5.9e-22  Score=202.66  Aligned_cols=143  Identities=24%  Similarity=0.407  Sum_probs=124.0

Q ss_pred             eeeccCCcEEEEEEEecC-------------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          487 SKLGQGGFGPVYWGRLKD-------------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-------------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      +.||+|+||.||+|+..+             ...||+|.+..........|.+|+.++..++||||+++++++.+....+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998542             2358999886655555668899999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc-------eEEEe
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN-------PKISD  626 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-------~Ki~D  626 (649)
                      +||||+++++|+.++..  ....+++..+++++.||++||+|||+.+   |+||||||+|||++.++.       +|++|
T Consensus        81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            99999999999998854  2346899999999999999999999987   999999999999987664       89999


Q ss_pred             cCCceeeC
Q 006347          627 FGMAKIFG  634 (649)
Q Consensus       627 FGla~~~~  634 (649)
                      ||++..+.
T Consensus       156 ~g~~~~~~  163 (262)
T cd05077         156 PGIPITVL  163 (262)
T ss_pred             CCCCcccc
Confidence            99998653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.88  E-value=8.7e-22  Score=204.36  Aligned_cols=150  Identities=35%  Similarity=0.480  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|++++++++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46888899999999999999876 68999999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+|+||+|+||++++++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            99999999999854   356899999999999999999999987   999999999999999999999999999986443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.88  E-value=9.4e-22  Score=203.77  Aligned_cols=148  Identities=29%  Similarity=0.409  Sum_probs=130.2

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |+..+.||+|+||.||++... +++.+|||.+....   ....+.+.+|+.++.+++|+|++++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            666789999999999999876 68899999986532   22345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++... ....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++....
T Consensus        82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630          82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence            9999999988542 2345889999999999999999999887   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.88  E-value=6e-22  Score=207.03  Aligned_cols=152  Identities=32%  Similarity=0.480  Sum_probs=132.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .++|.+.+.||+|+||.||++...      .+..||||+++... ....+.+.+|+.+++++ +|+||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            356888899999999999999742      34579999987543 23456789999999999 79999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+++|+|.+++... ....+++.++..++.+++.||+|||+.+   |+|+||||+|||++++..+|++|||+++
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence            99999999999999998642 2234899999999999999999999987   9999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       190 ~~~~  193 (302)
T cd05055         190 DIMN  193 (302)
T ss_pred             cccC
Confidence            7643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.87  E-value=8.3e-22  Score=201.72  Aligned_cols=150  Identities=32%  Similarity=0.594  Sum_probs=132.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CC---cEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DG---QEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g---~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|+..+.||+|+||.||+|+.. ++   ..+|||.++... ....+++..|++++.+++|+|++++.+++.+.+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            46778899999999999999875 23   379999986542 33457899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..  ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++....
T Consensus        85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          85 TEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            999999999999854  2356899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.87  E-value=1e-21  Score=198.77  Aligned_cols=143  Identities=31%  Similarity=0.527  Sum_probs=127.8

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChh
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD  565 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  565 (649)
                      +.||+|+||.||+|...++..+|+|.+..... .....|.+|+.++.+++|+||+++++++.+.+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999988889999999865433 23457899999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          566 ALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       566 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++...  ...+++..+..++.+++.||.|||+.+   ++||||||+||++++++.+||+|||+++...
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  144 (250)
T cd05085          81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQED  144 (250)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecc
Confidence            998542  345789999999999999999999987   9999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=1e-21  Score=202.95  Aligned_cols=146  Identities=36%  Similarity=0.570  Sum_probs=127.1

Q ss_pred             cccceeeccCCcEEEEEEEe-----cCCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEE
Q 006347          483 FQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKML  554 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  554 (649)
                      |+..+.||+|+||+||++..     .++..||+|.++... ......|.+|++++++++|+||+++++++.+.  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37778999999999988653     257789999986543 23467889999999999999999999998764  35789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++.+    ..+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence            9999999999999843    35899999999999999999999987   9999999999999999999999999998764


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       159 ~  159 (283)
T cd05080         159 E  159 (283)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.87  E-value=1.5e-21  Score=199.37  Aligned_cols=152  Identities=23%  Similarity=0.454  Sum_probs=134.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... +++.+|+|.++..   .....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888899999999999999987 7899999988632   2234678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++.+.. ....+++..+..++.++++||+|||+.+   |+|+||||+||++++++.+||+|||+++.+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            9999999999986422 2455899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=1.2e-21  Score=209.72  Aligned_cols=144  Identities=24%  Similarity=0.368  Sum_probs=126.7

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ....+|++.+.||+|+||.||+|+.. +++.||+|.....      ....|+.++.+++|+||+++++++.++...++|+
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            34467999999999999999999976 5678999975332      2356999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+ .++|.+++..  ....+++..+..|+.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus       137 e~~-~~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        137 PHY-SSDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             Ecc-CCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            999 4688888854  3456899999999999999999999987   999999999999999999999999999864

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.1e-21  Score=199.78  Aligned_cols=150  Identities=35%  Similarity=0.598  Sum_probs=135.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|.+.++||+|+||.||++...+++.+|||.+... ....+++.+|+.++++++|+||+++++++.+....++||||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            4678888999999999999999888889999998753 345678999999999999999999999999989999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++... ....+++..+..++.+++.||.|||+.+   ++|+||||+||++++++.+||+|||+++.+.
T Consensus        84 ~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034          84 SKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             CCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceecc
Confidence            999999999653 2346899999999999999999999987   9999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.87  E-value=5.7e-22  Score=203.33  Aligned_cols=143  Identities=25%  Similarity=0.431  Sum_probs=121.8

Q ss_pred             eeeccCCcEEEEEEEecCC---cEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKDG---QEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g---~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      ++||+|+||.||++...++   ..+++|.+.... ....+.|.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999976533   356677765432 345678999999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          563 SLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       563 sL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +|.+++.+... ....++.....++.||++||+|||+.+   ++||||||+|||++.++.+||+|||+++.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccc
Confidence            99999965321 234667778899999999999999987   99999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.87  E-value=8.7e-22  Score=201.34  Aligned_cols=152  Identities=22%  Similarity=0.435  Sum_probs=133.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. +++.||||.+...   .......+.+|++++++++||||+++++++.+.+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            46888899999999999999875 7899999987542   2234467899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++.... ....++...+..++.|+++||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999998885322 2345788999999999999999999987   99999999999999999999999999988643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=6.1e-22  Score=214.78  Aligned_cols=145  Identities=23%  Similarity=0.354  Sum_probs=127.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec---CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .+|.+.+.||+|+||.||++...   .+..||||.+...     +.+.+|+.++++++|+|||++++++......++|||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            46889999999999999999754   3578999988542     345689999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++. ++|.+++.   ....+++.+++.++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus       167 ~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~  239 (392)
T PHA03207        167 KYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP  239 (392)
T ss_pred             hcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence            995 68888883   3456899999999999999999999987   9999999999999999999999999998775443

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=5.5e-22  Score=207.42  Aligned_cols=149  Identities=34%  Similarity=0.600  Sum_probs=129.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc--EEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ--EIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~--~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|... ++.  .+|+|.++.. .....+++.+|++++.++ +|+||+++++++.+++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            46788899999999999999875 444  4688877643 234556889999999999 899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          556 YEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      |||+++++|.+++....             ....+++.+++.++.|+++||+|||+.+   |+||||||+|||+++++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence            99999999999986421             1235789999999999999999999887   9999999999999999999


Q ss_pred             EEEecCCcee
Q 006347          623 KISDFGMAKI  632 (649)
Q Consensus       623 Ki~DFGla~~  632 (649)
                      ||+|||+++.
T Consensus       164 kl~dfg~~~~  173 (303)
T cd05088         164 KIADFGLSRG  173 (303)
T ss_pred             EeCccccCcc
Confidence            9999999974

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=6.7e-22  Score=204.53  Aligned_cols=151  Identities=25%  Similarity=0.406  Sum_probs=132.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|++.+.||+|+||.||++... ++..+|+|.+... ......++.+|+.++.+++|+||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5777889999999999999986 7899999988643 2334568999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|..++........+++..+..++.++++||.|||+..  +|+|+||||+||++++++.+||+|||+++.+.
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  154 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV  154 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            99999999865333447899999999999999999999742  39999999999999999999999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.87  E-value=4.1e-23  Score=216.43  Aligned_cols=138  Identities=32%  Similarity=0.510  Sum_probs=125.0

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      .++-||.|+.|.||.|++. ++.||||+++...       ..+|.-|++|+|+||+.+.|+|.+..-.+||||||+.|.|
T Consensus       128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL  199 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL  199 (904)
T ss_pred             hhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence            3468999999999999998 7899999885432       2578889999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ...|+.   ..++.......+..+||.||.|||.+.   |||||||.-||||..+-.+||+|||-++.+...
T Consensus       200 ~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~  265 (904)
T KOG4721|consen  200 YEVLKA---GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK  265 (904)
T ss_pred             HHHHhc---cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence            999953   467888999999999999999999988   999999999999999999999999999988554

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.87  E-value=1.8e-21  Score=200.88  Aligned_cols=144  Identities=25%  Similarity=0.355  Sum_probs=127.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|+..+.||+|+||.||+|... +++.+|||.+... .....+++.+|+.++.+++|+||+++++++..++..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            5677789999999999999864 6889999998654 2334567999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|..+.       .+++..+..++.|++.||.|||+.+   |+|+||||+|||++.++.+||+|||++..+..
T Consensus        82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            999997553       3678888899999999999999987   99999999999999999999999999987643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.87  E-value=1.1e-21  Score=199.18  Aligned_cols=148  Identities=36%  Similarity=0.490  Sum_probs=131.9

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      +|+..+.||+|+||+||+|... +++.|++|.+....     .+..+++.+|+.++++++|+||+++++++.++...++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3666789999999999999987 78999999886432     23457899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++.+   ...+++..+..++.|+++||+|||+.+   |+|+||+|+||++++++.+||+|||+++....
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            999999999999853   345889999999999999999999987   99999999999999999999999999987644

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.3e-23  Score=217.91  Aligned_cols=155  Identities=35%  Similarity=0.541  Sum_probs=135.0

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |+.++.||.|+||.||-+... +.+.||||++.-.   +...++.++.|+..|.+++|||.+.+-|++......||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            666789999999999999865 6788999998643   334578899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      | -||-.++|.-  .++++..-++..|..+.++||+|||+..   .||||||+.||||.+.+.+|++|||-|.+..+.  
T Consensus       108 C-lGSAsDlleV--hkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--  179 (948)
T KOG0577|consen  108 C-LGSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--  179 (948)
T ss_pred             H-hccHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence            9 6687777732  3567888999999999999999999988   999999999999999999999999999987543  


Q ss_pred             ccccCceeecC
Q 006347          639 QADTGRVVGTL  649 (649)
Q Consensus       639 ~~~~~~~~GT~  649 (649)
                          ++++|||
T Consensus       180 ----nsFvGTP  186 (948)
T KOG0577|consen  180 ----NSFVGTP  186 (948)
T ss_pred             ----hcccCCc
Confidence                3477875

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.87  E-value=7.5e-22  Score=206.68  Aligned_cols=151  Identities=30%  Similarity=0.523  Sum_probs=131.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  550 (649)
                      ++|.+.+.||+|+||.||++...        +...+|+|.++... .....++..|+.++.++ +|+||+++++++.+.+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            56888899999999999999753        23579999987542 34456788999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      ..++||||+++|+|.+++....             ....+++.+++.++.|++.||+|||+.+   ++||||||+||+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEc
Confidence            9999999999999999996532             1235899999999999999999999887   99999999999999


Q ss_pred             CCCceEEEecCCceeeC
Q 006347          618 EELNPKISDFGMAKIFG  634 (649)
Q Consensus       618 ~~~~~Ki~DFGla~~~~  634 (649)
                      +++.+||+|||+++.+.
T Consensus       175 ~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         175 EDNVMKIADFGLARDIH  191 (307)
T ss_pred             CCCcEEECCCccccccc
Confidence            99999999999998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.3e-21  Score=201.84  Aligned_cols=149  Identities=32%  Similarity=0.569  Sum_probs=129.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|++.+.||+|+||.||+|... ++.    .+|+|.+..... ....++.+|+.++++++|+||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45677789999999999999865 233    689998865432 345789999999999999999999999987 78899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++...  ...+++..++.++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence            99999999999999642  345899999999999999999999977   9999999999999999999999999998765


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       161 ~  161 (279)
T cd05057         161 V  161 (279)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.87  E-value=1.5e-21  Score=201.47  Aligned_cols=150  Identities=27%  Similarity=0.449  Sum_probs=132.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|+..+.||+|+||.||++... +++.||+|++....  ....+.+.+|+.++++++|+|++++++++..+...++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            36788899999999999999987 68999999886432  2234678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |++++.|..++..   ...+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            9999988887643   345899999999999999999999987   999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.87  E-value=1.6e-21  Score=197.99  Aligned_cols=151  Identities=25%  Similarity=0.414  Sum_probs=133.9

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|+||.||.++.. +++.+++|.+...  .....+++.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            4778899999999999998865 6889999987643  244567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++|.+++... ....+++..+..++.|+++||+|||+.+   ++|+||||+||++++++.+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQ-KGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            9999999999653 2356899999999999999999999887   999999999999999999999999999987443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4.9e-23  Score=211.52  Aligned_cols=160  Identities=30%  Similarity=0.445  Sum_probs=140.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .|+..+.||+|.||.||||... .++.||+|.+.-. ...+.++..+|+.++..++|+||.+++|.+..+...+++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            4666689999999999999976 6889999999754 3445678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      .+|++.+.|..   ...+++....-|++++..||.|||.++   .+|||||+.|||+.+++.+|++|||.|..+.....+
T Consensus        94 ~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen   94 GGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR  167 (467)
T ss_pred             cCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence            99999999842   334477777788999999999999998   999999999999999999999999999999777666


Q ss_pred             cccCceeecC
Q 006347          640 ADTGRVVGTL  649 (649)
Q Consensus       640 ~~~~~~~GT~  649 (649)
                      .  .+++|||
T Consensus       168 r--~tfvGTP  175 (467)
T KOG0201|consen  168 R--KTFVGTP  175 (467)
T ss_pred             c--ccccccc
Confidence            5  4489996

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.87  E-value=9.2e-22  Score=205.00  Aligned_cols=149  Identities=31%  Similarity=0.551  Sum_probs=128.9

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-Cc--EEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-GQ--EIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-g~--~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|...+ +.  .+++|.++.. .....+.|.+|+.++.++ +||||+++++++.+.+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            467888999999999999998763 33  4788888642 234457899999999999 799999999999999999999


Q ss_pred             EecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          556 YEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      +||+++++|.+++....             ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            99999999999986421             1135889999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCcee
Q 006347          623 KISDFGMAKI  632 (649)
Q Consensus       623 Ki~DFGla~~  632 (649)
                      ||+|||+++.
T Consensus       159 kl~dfg~~~~  168 (297)
T cd05089         159 KIADFGLSRG  168 (297)
T ss_pred             EECCcCCCcc
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.87  E-value=1.3e-21  Score=199.48  Aligned_cols=149  Identities=37%  Similarity=0.611  Sum_probs=132.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|.+.++||+|+||.||+|...+++.+|+|.+.... ....++.+|+.++++++|+|++++++++ ..+..+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence            35688889999999999999998889999999987543 3457899999999999999999999986 456789999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++... ....+++.++..++.|++.||+|||+.+   ++||||||+||++++++.++|+|||+++...
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067          83 ENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             CCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            999999998543 2346899999999999999999999887   9999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.87  E-value=1.3e-21  Score=199.48  Aligned_cols=142  Identities=33%  Similarity=0.576  Sum_probs=123.4

Q ss_pred             eeccCCcEEEEEEEec---CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCC
Q 006347          488 KLGQGGFGPVYWGRLK---DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      .||+|+||.||+|...   ++..||+|.+..... ...++|.+|+.++++++|+||+++++++. .+..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999764   356799999865432 33567999999999999999999999875 457899999999999


Q ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       564 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |.+++..  ....+++..+++++.|+++||+|||+.+   ++||||||+|||++.+..+||+|||+++.+..
T Consensus        81 L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  147 (257)
T cd05115          81 LNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGA  147 (257)
T ss_pred             HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccC
Confidence            9999854  2356899999999999999999999987   99999999999999999999999999986643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.87  E-value=1.2e-21  Score=199.79  Aligned_cols=149  Identities=34%  Similarity=0.579  Sum_probs=131.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.++||+|+||.||++...++..+|+|.+.... ...+.|.+|+.++++++|+|++++++++. .+..+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            4577789999999999999998888899999986533 34578999999999999999999999875 556899999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++.+. ....+++..+..++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          84 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIED  154 (260)
T ss_pred             CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence            99999998642 2345899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.87  E-value=1.7e-21  Score=203.24  Aligned_cols=148  Identities=29%  Similarity=0.474  Sum_probs=130.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.++||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            46888899999999999999876 67899999986432 23345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.+++.+.  ...+++..+..++.|+++||+|||+.+   |+|+||||+||++++++.+||+|||+++...
T Consensus        86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            97 5898888542  345789999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.87  E-value=8.2e-22  Score=201.53  Aligned_cols=151  Identities=21%  Similarity=0.441  Sum_probs=132.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||++... +++.+|||.+...   ......++.+|+.+++.++|+||+++++++.+++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            35777889999999999999964 7899999987642   2234568899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++++|.+++.... ....+++..+..++.++++||.|||+.+   ++|+||||+||+++.++.+||+|||+++.+.
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            9999999999886422 2456899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.87  E-value=1.8e-21  Score=198.57  Aligned_cols=149  Identities=33%  Similarity=0.550  Sum_probs=130.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|.+.++||+|++|.||++....+..+|+|.+... ....+.+.+|+.++++++|+|++++++++. .+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            457788999999999999999887778999988643 234567899999999999999999999875 556889999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++... ....+++..+..++.+++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05069          84 KGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccC
Confidence            99999999653 2345889999999999999999999887   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.87  E-value=1.4e-21  Score=203.61  Aligned_cols=148  Identities=28%  Similarity=0.489  Sum_probs=133.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .+|+..+.||.|++|.||+|... +++.||+|.+........+.+.+|+.+++.++|+|++++++++.+.+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            45888899999999999999864 78999999987655555678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++.+    ..+++.++..++.++++||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence            99999998843    35899999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.87  E-value=1e-21  Score=203.39  Aligned_cols=152  Identities=30%  Similarity=0.547  Sum_probs=132.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|+..+.||+|+||.||++...      ++..+|+|.+.... ....++|.+|+.++.+++|+||+++++++.+++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            456888899999999999999864      46789999986542 23457799999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCc
Q 006347          553 MLIYEYMPNRSLDALLFDPL-------------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASN  613 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~N  613 (649)
                      ++||||+++++|.+++....                   ....+++..++.++.|++.||+|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            99999999999999986321                   1134788999999999999999999987   9999999999


Q ss_pred             EEEcCCCceEEEecCCceeeC
Q 006347          614 ILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++++++.+||+|||+++.+.
T Consensus       161 il~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             eEecCCCceEECccccceecc
Confidence            999999999999999998753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.6e-21  Score=198.77  Aligned_cols=148  Identities=33%  Similarity=0.515  Sum_probs=131.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|.+.+.||+|++|.||++... +++++|+|.+....     ....+.+.+|+.++.+++|+||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46888899999999999999865 68999999886432     1234578899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+||+++++|.+++..   ...+++.....++.+++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+.
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999999853   345788999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.87  E-value=1.7e-21  Score=197.71  Aligned_cols=147  Identities=39%  Similarity=0.635  Sum_probs=131.1

Q ss_pred             eeeccCCcEEEEEEEecC----CcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||++....    +..+|||.+...... ..+++.+|+..+.+++|+|++++++++.++...++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            479999999999999764    788999999764433 368899999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCC------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          562 RSLDALLFDPLK------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       562 gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++|.+++.....      ...+++..+..++.|+++||+|||+.+   ++|+||||+||++++++.+||+|||+++....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999965321      367899999999999999999999987   99999999999999999999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       158 ~  158 (262)
T cd00192         158 D  158 (262)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.87  E-value=5.9e-22  Score=213.59  Aligned_cols=149  Identities=28%  Similarity=0.395  Sum_probs=130.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-C-----CCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H-----RNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l  554 (649)
                      +|.+.+.||+|.||+|.||... +++.||||+++. ...-.++-..|+.+|..|+ |     -|+|++++++..+++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN-~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN-KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeecc-ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            6888999999999999999876 699999999965 3455677788999999996 4     489999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC--CceEEEecCCcee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE--LNPKISDFGMAKI  632 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~Ki~DFGla~~  632 (649)
                      |+|.+ .-+|.++|+.+ +...++...+..|+.||+.||.+||+.+   |||+||||+||||.+.  ..+||+|||.|..
T Consensus       266 VfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            99998 56999999764 4567999999999999999999999887   9999999999999864  4699999999987


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      ....
T Consensus       341 ~~q~  344 (586)
T KOG0667|consen  341 ESQR  344 (586)
T ss_pred             cCCc
Confidence            6443

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.2e-21  Score=197.53  Aligned_cols=149  Identities=28%  Similarity=0.500  Sum_probs=135.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|...+.||+|+||.||++... +++.+|+|.+........+.+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            57888899999999999999875 57889999987655556788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++...  ...++...+..++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++..+.
T Consensus        83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          83 GGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhh
Confidence            999999998542  256889999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.87  E-value=1.1e-21  Score=201.68  Aligned_cols=150  Identities=32%  Similarity=0.477  Sum_probs=131.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      .+|+..+.||+|+||.||+|+..      +...+++|.+...... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            46788899999999999999864      2467999988654333 4578999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          554 LIYEYMPNRSLDALLFDPLKK------ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +||||+++++|.+++......      ..+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            999999999999999653311      26899999999999999999999987   999999999999999999999999


Q ss_pred             CCceee
Q 006347          628 GMAKIF  633 (649)
Q Consensus       628 Gla~~~  633 (649)
                      |+++..
T Consensus       162 ~~~~~~  167 (275)
T cd05046         162 SLSKDV  167 (275)
T ss_pred             cccccc
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.87  E-value=1.2e-21  Score=215.49  Aligned_cols=148  Identities=24%  Similarity=0.383  Sum_probs=122.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--------C
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--------E  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~  550 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++....    ....+|+.++++++|+|||++++++...        .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            457999999999999999999875 68899999885422    2345799999999999999999887532        1


Q ss_pred             eEEEEEecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecC
Q 006347          551 EKMLIYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFG  628 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFG  628 (649)
                      ..++||||+++ +|.+++... .....+++.....++.||++||+|||+.+   |+||||||+|||++.+. .+||+|||
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG  216 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG  216 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence            35699999975 676666422 23456899999999999999999999987   99999999999999664 79999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +|+.+..
T Consensus       217 la~~~~~  223 (440)
T PTZ00036        217 SAKNLLA  223 (440)
T ss_pred             cchhccC
Confidence            9997643

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=3.4e-21  Score=195.72  Aligned_cols=150  Identities=21%  Similarity=0.368  Sum_probs=132.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|++.++||+|+||.||++... +++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+.+++..++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4677899999999999999876 6889999988543 2345577889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++... ....++......++.|+++||.|||+.+   |+|+||||+||++++++.++++|||+++.+..
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            999999988542 3345788999999999999999999987   99999999999999999999999999987743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=1.7e-21  Score=199.80  Aligned_cols=147  Identities=31%  Similarity=0.474  Sum_probs=129.0

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc----------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG----------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE  550 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~----------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  550 (649)
                      +|...+.||+|+||.||+|... +++.+|||.++....          ...+.+..|+.++.+++|+|++++++++..++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4667789999999999999865 688999998753211          11346888999999999999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..++||||+++++|.+++.+.   ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            999999999999999998542   56889999999999999999999987   999999999999999999999999999


Q ss_pred             eeeC
Q 006347          631 KIFG  634 (649)
Q Consensus       631 ~~~~  634 (649)
                      +...
T Consensus       156 ~~~~  159 (272)
T cd06629         156 KKSD  159 (272)
T ss_pred             cccc
Confidence            8754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.87  E-value=1.2e-21  Score=205.86  Aligned_cols=151  Identities=30%  Similarity=0.522  Sum_probs=130.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  550 (649)
                      .+|.+.++||+|+||.||+++..        ....+|+|.++... .....++..|+.++.++ +|+||+++++++.+.+
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            46778899999999999999742        24579999886432 34456789999999999 6999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      ..++||||+++|+|.+++....             ....+++.++..++.|++.||.|||+.+   |+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence            9999999999999999996421             1245899999999999999999999987   99999999999999


Q ss_pred             CCCceEEEecCCceeeC
Q 006347          618 EELNPKISDFGMAKIFG  634 (649)
Q Consensus       618 ~~~~~Ki~DFGla~~~~  634 (649)
                      +++.+||+|||+++.+.
T Consensus       169 ~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         169 EDNVMKIADFGLARGVH  185 (314)
T ss_pred             CCCcEEEcccccccccc
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.87  E-value=1.8e-21  Score=202.54  Aligned_cols=148  Identities=30%  Similarity=0.489  Sum_probs=131.0

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-----cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-----GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      +|+..+.||+|+||.||+|... +++.||||++......     ....+..|++++.+++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            3677789999999999999976 6899999999654322     345677899999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+ +++|.+++...  ...+++..+..++.||++||.|||+.+   |+|+||||+||+++.++.+||+|||+++....
T Consensus        81 ~e~~-~~~L~~~i~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDK--SIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 99999999542  236899999999999999999999987   99999999999999999999999999988754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.87  E-value=1.3e-21  Score=201.59  Aligned_cols=152  Identities=32%  Similarity=0.538  Sum_probs=131.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|.+.+.||+|+||.||+|....      +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4678888999999999999998753      5679999886433 23456799999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC---ceEEE
Q 006347          553 MLIYEYMPNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL---NPKIS  625 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~Ki~  625 (649)
                      ++||||+++++|.+++....    ....+++..+++++.||++||+|||+.+   ++||||||+||++++++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence            99999999999999986432    1235899999999999999999999987   99999999999998654   69999


Q ss_pred             ecCCceeeC
Q 006347          626 DFGMAKIFG  634 (649)
Q Consensus       626 DFGla~~~~  634 (649)
                      |||+++.+.
T Consensus       162 dfg~~~~~~  170 (277)
T cd05036         162 DFGMARDIY  170 (277)
T ss_pred             cCccccccC
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.87  E-value=1.1e-21  Score=202.88  Aligned_cols=159  Identities=29%  Similarity=0.438  Sum_probs=135.0

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEE---
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCV---  547 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~---  547 (649)
                      ++.+..+.++|++.+.||+|+||.||++... +++.+|+|.++.. .....++.+|+.++.++ +|+||+++++++.   
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            3455567789999999999999999999875 6789999988643 22346788999999999 6999999999885   


Q ss_pred             --eCCeEEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          548 --EGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       548 --~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                        .++..++||||+++++|.+++.... ....+++..+..++.|+++||.|||+.+   |+||||||+||++++++.+||
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEE
Confidence              3456899999999999999875322 2356889999999999999999999887   999999999999999999999


Q ss_pred             EecCCceeeCC
Q 006347          625 SDFGMAKIFGG  635 (649)
Q Consensus       625 ~DFGla~~~~~  635 (649)
                      +|||+++.+..
T Consensus       166 ~dfg~~~~~~~  176 (286)
T cd06638         166 VDFGVSAQLTS  176 (286)
T ss_pred             ccCCceeeccc
Confidence            99999987643

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.87  E-value=8.5e-22  Score=204.90  Aligned_cols=142  Identities=29%  Similarity=0.504  Sum_probs=128.5

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ...||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++.+..++..++||||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            468999999999999875 6889999998765555667899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .+++..    ..+++.++..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||++..+.
T Consensus       107 ~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (292)
T cd06658         107 TDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS  169 (292)
T ss_pred             HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcc
Confidence            998832    35889999999999999999999987   9999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.87  E-value=1.8e-21  Score=203.51  Aligned_cols=146  Identities=25%  Similarity=0.389  Sum_probs=131.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||++... .++.||+|.+....   ....+.+.+|+.+++.++|+||+++++.+.++++.++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888899999999999999876 57899999986543   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ||+++++|.+++..   ...+++..+..++.++++||.|||+.+   ++||||||+||++++++.+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            99999999999953   346899999999999999999999987   99999999999999999999999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=1.7e-21  Score=208.82  Aligned_cols=147  Identities=28%  Similarity=0.418  Sum_probs=125.8

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----  550 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----  550 (649)
                      ..++|++.+.||+|+||.||++... +++.||||.+...  .....+++.+|+.++..++|+||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            3478999999999999999999875 6899999998643  2334567889999999999999999999987543     


Q ss_pred             -eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          551 -EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       551 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                       ..++||||+++ +|.+.+.     ..+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence             47999999965 5655552     23788889999999999999999987   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      ++...
T Consensus       170 a~~~~  174 (359)
T cd07876         170 ARTAC  174 (359)
T ss_pred             ccccc
Confidence            98653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.87  E-value=1.7e-21  Score=198.32  Aligned_cols=142  Identities=32%  Similarity=0.550  Sum_probs=124.1

Q ss_pred             eeccCCcEEEEEEEec---CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          488 KLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +||+|+||.||+|..+   ++..+|+|+++...  ....+++.+|+.++++++|+||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            6899999999999753   57889999986433  234578999999999999999999999875 55778999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+...
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence            99999843   346899999999999999999999987   999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.87  E-value=1.6e-21  Score=206.73  Aligned_cols=152  Identities=29%  Similarity=0.515  Sum_probs=131.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  550 (649)
                      .+|.+.+.||+|+||.||++...        ....||+|.++... ....+++.+|+.++.++ +|+||+++++++.+++
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            35788899999999999999742        12468999886432 33467899999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      ..+++|||+++|+|.+++....             ....+++..+..++.|+++||+|||+.+   |+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence            9999999999999999986421             2345889999999999999999999987   99999999999999


Q ss_pred             CCCceEEEecCCceeeCC
Q 006347          618 EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       618 ~~~~~Ki~DFGla~~~~~  635 (649)
                      +++.+||+|||+++.+..
T Consensus       169 ~~~~~kL~Dfg~~~~~~~  186 (334)
T cd05100         169 EDNVMKIADFGLARDVHN  186 (334)
T ss_pred             CCCcEEECCcccceeccc
Confidence            999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.87  E-value=2.4e-21  Score=200.96  Aligned_cols=149  Identities=29%  Similarity=0.422  Sum_probs=129.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++++|.+.+.||+|+||.||+|... +++.+|||.+..... .....+.+|+.++++++|+||+++++++.+++..++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4578999999999999999999875 688999999865432 33456789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||++ ++|.+++...  ...+.+..+..++.|++.||+|||+.+   |+|+||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          83 EYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             eccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccccc
Confidence            9996 6777776432  345788888899999999999999987   999999999999999999999999999865

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2.6e-21  Score=197.83  Aligned_cols=146  Identities=36%  Similarity=0.590  Sum_probs=129.7

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc---------cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ---------GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~---------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      |.+...||+|+||.||+|... +++.+|+|.+......         ..+.+.+|+.++.+++|+||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            566789999999999999875 6789999988643221         235688999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   ++||||+|+||++++++.+||+|||+++.
T Consensus        82 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~  155 (267)
T cd06628          82 NIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK  155 (267)
T ss_pred             EEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence            999999999999999953   356888999999999999999999987   99999999999999999999999999988


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      +.
T Consensus       156 ~~  157 (267)
T cd06628         156 LE  157 (267)
T ss_pred             cc
Confidence            75

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=2.3e-21  Score=199.81  Aligned_cols=148  Identities=34%  Similarity=0.616  Sum_probs=131.0

Q ss_pred             CcccceeeccCCcEEEEEEEec-----CCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-----~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  553 (649)
                      .|+..+.||+|+||.||+++..     .+..+|||.+...... ..++|.+|+.++++++|+||+++++++..  +...+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4666789999999999999864     3678999999754432 46789999999999999999999999987  55789


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+
T Consensus        85 lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             EEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            999999999999999542  235899999999999999999999987   999999999999999999999999999987


Q ss_pred             C
Q 006347          634 G  634 (649)
Q Consensus       634 ~  634 (649)
                      .
T Consensus       160 ~  160 (284)
T cd05038         160 P  160 (284)
T ss_pred             c
Confidence            5

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.87  E-value=2e-21  Score=198.66  Aligned_cols=148  Identities=32%  Similarity=0.494  Sum_probs=128.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  552 (649)
                      ++|++.+.||+|+||.||++... ++..||||.+....     ....+.+.+|+.++.+++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            47888899999999999999876 58899999875321     12346788999999999999999999998764  457


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..   ...+++....+++.|++.||+|||+.+   |+|+||||+||+++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence            899999999999999853   245788889999999999999999987   99999999999999999999999999986


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      +.
T Consensus       156 ~~  157 (265)
T cd06652         156 LQ  157 (265)
T ss_pred             cc
Confidence            53

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.5e-21  Score=207.76  Aligned_cols=149  Identities=28%  Similarity=0.433  Sum_probs=128.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC------
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  549 (649)
                      ..++|.+.+.||+|+||.||++... +++.||||++....  ....+++.+|+.++.+++|+||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            3467888899999999999999865 67899999986532  23446788999999999999999999987643      


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ...++++|++ +++|.+++.    ...+++..+..++.||++||.|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence            3568999988 789988873    345899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      ++....
T Consensus       165 ~~~~~~  170 (343)
T cd07878         165 ARQADD  170 (343)
T ss_pred             ceecCC
Confidence            997643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.87  E-value=3e-21  Score=199.18  Aligned_cols=149  Identities=30%  Similarity=0.535  Sum_probs=131.9

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|+..++||+|++|.||+|+.. +++.||||.++.... .....+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4778899999999999999986 688999999875432 23567789999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ +|.+++........+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~  151 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFG  151 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence            85 88888865444456899999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.86  E-value=3.3e-21  Score=196.02  Aligned_cols=148  Identities=32%  Similarity=0.529  Sum_probs=129.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~  559 (649)
                      .+|.+.+.||+|+||.||++... +..+|+|.++..  ...+.|.+|+.++++++|+|++++++++.+ ++..++||||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            35778899999999999999876 788999988643  345689999999999999999999998654 45789999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++... ....+++..++.++.+++.||+|||+.+   ++||||||+||++++++.+||+|||+++....
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082          83 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccc
Confidence            999999998653 2345889999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.86  E-value=2.3e-21  Score=199.94  Aligned_cols=151  Identities=25%  Similarity=0.366  Sum_probs=127.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHH-HhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMV-ISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||++... +|+.||||+++... .....++..|+.+ ++.++|+||+++++++.+++..++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999976 68999999987542 2334566667765 556689999999999999999999999


Q ss_pred             cCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++ |+|.+++... .....+++..+..++.||+.||+|||++.  +++||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            996 7888887542 23356899999999999999999999862  39999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.86  E-value=3.2e-21  Score=196.64  Aligned_cols=150  Identities=31%  Similarity=0.539  Sum_probs=132.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|++.++||+|+||.||++...++..+|+|.+... ....+.|.+|+.++++++|+|++++++.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            3568888999999999999999887888999988643 3345789999999999999999999999887 7789999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++... ....+++..+..++.+++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          83 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             CCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            999999999653 2345789999999999999999999887   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.86  E-value=2.2e-21  Score=198.28  Aligned_cols=146  Identities=30%  Similarity=0.533  Sum_probs=130.0

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccc------cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      +|+..+.||+|+||+||+|...+++.+|||.++...      ....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            366778999999999999998889999999886422      12335688999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||+++++|.+++.+   ...+++..+..++.|++.||+|||+.+   |+|+||+|+||++++++.+||+|||+++..
T Consensus        81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            999999999999953   345789999999999999999999887   999999999999999999999999999865

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.86  E-value=2.1e-21  Score=197.34  Aligned_cols=144  Identities=33%  Similarity=0.489  Sum_probs=128.0

Q ss_pred             eeeccCCcEEEEEEEecC--C--cEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD--G--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~--g--~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|++|.||+|....  +  ..||||.+..... ...+++.+|+.++.+++|+||+++++.+.+ ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998753  2  3699999976554 567789999999999999999999999988 889999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++|.+++.+... ..+++.....++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccc
Confidence            999999965422 56899999999999999999999987   99999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.86  E-value=1.8e-21  Score=202.94  Aligned_cols=142  Identities=32%  Similarity=0.524  Sum_probs=128.2

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ..+||+|+||.||++... +++.||||.+........+.+.+|+.++..++||||+++++++..++..++||||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            358999999999999875 6899999998655445567788999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ..++.    ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus       106 ~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~  168 (297)
T cd06659         106 TDIVS----QTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQIS  168 (297)
T ss_pred             HHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcc
Confidence            99873    245889999999999999999999987   9999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.86  E-value=4.9e-22  Score=210.34  Aligned_cols=151  Identities=29%  Similarity=0.518  Sum_probs=131.6

Q ss_pred             CcccceeeccCCcEEEEEEEecC---C--cEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD---G--QEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~---g--~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .....++||+|-||.||+|++.+   |  -.||||.-+.. .....+.|+.|..+|++++|||||+|+|.|.+. ..+||
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv  468 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV  468 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence            34556789999999999998642   3  35899988764 345678899999999999999999999999764 78999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||.++-|.|..||..  ++..|+......++.||+.||+|||+..   .|||||.++|||+...-.+|++||||+|-+..
T Consensus       469 mEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  469 MELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             EecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            999999999999964  4556888999999999999999999987   99999999999999999999999999998865


Q ss_pred             CCC
Q 006347          636 NQD  638 (649)
Q Consensus       636 ~~~  638 (649)
                      +..
T Consensus       544 ~~y  546 (974)
T KOG4257|consen  544 DAY  546 (974)
T ss_pred             cch
Confidence            543

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.86  E-value=2.1e-21  Score=203.01  Aligned_cols=149  Identities=33%  Similarity=0.644  Sum_probs=126.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|+..+.||+|+||.||+|... +++    .+|+|.+..... ....++.+|+.++++++|+||+++++++.+. ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            45677789999999999999864 343    578998865432 3345789999999999999999999998754 4679


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++||+++|+|.+++...  ...+++..++.++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             eehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence            99999999999998542  345889999999999999999999987   9999999999999999999999999999765


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       161 ~  161 (303)
T cd05110         161 G  161 (303)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.86  E-value=1.5e-21  Score=200.94  Aligned_cols=146  Identities=32%  Similarity=0.504  Sum_probs=130.2

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      |+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+.++++++|+||+++++++..++..++||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            556678999999999999875 57899999886432 3445678999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++.    ...+++..+..++.++++||.|||+.+   ++|+||+|+||++++++.+||+|||+++.+..
T Consensus        86 ~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642          86 GGSALDLLK----PGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccC
Confidence            999999884    346889999999999999999999887   99999999999999999999999999987643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.86  E-value=1.6e-21  Score=201.37  Aligned_cols=149  Identities=28%  Similarity=0.456  Sum_probs=131.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|+..++||+|+||.||+|... +++.+|+|++.....  ...+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999986 589999998865322  234678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.++...   ...+++..+..++.||++||+|||+.+   |+|+||+|+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            9999999887642   345899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.86  E-value=3.2e-21  Score=200.67  Aligned_cols=148  Identities=29%  Similarity=0.480  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|...+.||+|+||.||++... ++..||+|.+........+.+.+|+.++++++|||++++++.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            57888899999999999999864 67899999986554455678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++.+    ..+++.++..++.++++||.|||+.+   ++|+||||+||++++++.+||+|||++..+..
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            99999999843    35789999999999999999999987   99999999999999999999999999886643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.86  E-value=2.7e-21  Score=200.62  Aligned_cols=160  Identities=33%  Similarity=0.453  Sum_probs=137.2

Q ss_pred             CCHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEe
Q 006347          471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE  548 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  548 (649)
                      +...++..++++|.+.+.||+|+||.||++... +++.+|+|.+... .....++.+|+.++.++ +|+|++++++++.+
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            445566677889999999999999999999875 6889999998643 23346778899999999 79999999999876


Q ss_pred             CC-----eEEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          549 GE-----EKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       549 ~~-----~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      .+     ..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence            43     5799999999999999885322 2356899999999999999999999887   9999999999999999999


Q ss_pred             EEEecCCceeeC
Q 006347          623 KISDFGMAKIFG  634 (649)
Q Consensus       623 Ki~DFGla~~~~  634 (649)
                      ||+|||+++.+.
T Consensus       168 kl~dfg~~~~~~  179 (291)
T cd06639         168 KLVDFGVSAQLT  179 (291)
T ss_pred             EEeecccchhcc
Confidence            999999998754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.86  E-value=3.9e-21  Score=195.86  Aligned_cols=148  Identities=33%  Similarity=0.485  Sum_probs=133.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|+||.||+|... +++.+|+|.++....  ...+++..|+.++++++|+||+++++.+.+.+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4777899999999999999875 688999999875543  3678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++..   ...+++..+..|+.++++||.|||+.+   |+|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence            999999999853   345788999999999999999999987   99999999999999999999999999988743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=3.1e-21  Score=203.78  Aligned_cols=143  Identities=21%  Similarity=0.243  Sum_probs=115.1

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec--CCcEEEEEEeccc-----ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKA-----SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG  549 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  549 (649)
                      ....++|.+.+.||+|+||+||+|...  +++.+|||++...     .....+.|.+|++++.+++|+|++..+..   .
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence            344567999999999999999999875  5777899987532     11235679999999999999999853322   2


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC-CCCcEEEcCCCceEEEecC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDL-KASNILLDEELNPKISDFG  628 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~Ki~DFG  628 (649)
                      ++.+|||||+++++|....    ...      ...++.+++++|.|||+.+   |+|||| ||+|||++.++.+||+|||
T Consensus        91 ~~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             CCcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECc
Confidence            5679999999999996321    111      1457889999999999987   999999 9999999999999999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +|+.+..
T Consensus       158 lA~~~~~  164 (365)
T PRK09188        158 LASVFRR  164 (365)
T ss_pred             cceeccc
Confidence            9998754

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.86  E-value=4.2e-21  Score=201.80  Aligned_cols=144  Identities=28%  Similarity=0.463  Sum_probs=119.5

Q ss_pred             ceeeccCCcEEEEEEEec---CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEEEEecCC
Q 006347          486 SSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKMLIYEYMP  560 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~  560 (649)
                      .++||+|+||.||+|...   +++.+|+|.+...  .....+.+|+.++++++||||+++++++.+  +...++||||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            368999999999999865   4678999998643  233567899999999999999999999865  446789999985


Q ss_pred             CCChhhhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE----cCCCceEEEecCCc
Q 006347          561 NRSLDALLFDPL------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMA  630 (649)
Q Consensus       561 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~Ki~DFGla  630 (649)
                       ++|.+++....      ....+++..+..++.||+.||.|||+.+   |+||||||+|||+    +..+.+||+|||+|
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             57877764211      1235888999999999999999999987   9999999999999    45678999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +.+..
T Consensus       160 ~~~~~  164 (317)
T cd07868         160 RLFNS  164 (317)
T ss_pred             eccCC
Confidence            98754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.86  E-value=3.1e-21  Score=197.85  Aligned_cols=149  Identities=27%  Similarity=0.453  Sum_probs=129.1

Q ss_pred             cCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|.+.+.||+|+||.||+|...+    ...||||...... ....+.+.+|+.++++++|+||+++++++.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            457778999999999999998653    2468999886544 3456789999999999999999999998875 567899


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++...  ...+++..+..++.++++||+|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence            9999999999999542  335899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=4e-21  Score=194.52  Aligned_cols=143  Identities=36%  Similarity=0.564  Sum_probs=128.8

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChh
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD  565 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  565 (649)
                      ++||+|+||.||++...+++.||+|.+...... ..+++.+|+.++++++|+||+++++++.+....++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            479999999999999877999999998754333 5678999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          566 ALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       566 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++...  ...+++..+..++.+++.||+|||+++   ++||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            998542  335789999999999999999999987   9999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.86  E-value=4.8e-21  Score=194.60  Aligned_cols=149  Identities=30%  Similarity=0.568  Sum_probs=132.5

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .+|++.+.||+|+||.||++...++..+|+|.+... .....+|.+|++++++++|+|++++++++.+....++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            356778999999999999999877889999988643 2345689999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++...  ...+++..+..++.+++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeeccc
Confidence            99999998542  345789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.86  E-value=3.5e-21  Score=199.64  Aligned_cols=147  Identities=29%  Similarity=0.474  Sum_probs=129.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|+..+.||+|++|.||+|... +++.||||.+..... .....+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            56888899999999999999976 688999999865332 2235677899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++ +|.+++.+.  ...+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++..
T Consensus        85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccccccc
Confidence            974 999888542  236889999999999999999999987   999999999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.86  E-value=5.2e-21  Score=197.52  Aligned_cols=149  Identities=28%  Similarity=0.526  Sum_probs=133.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.+.||+|+||.||+|... +++.||||++....  ....+.+.+|+.++++++|+||+++++++.++...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4778899999999999999975 68999999986543  33457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      + +++|.+++...  ...+++.++..++.||++||+|||+.+   ++|+||||+||++++++.+||+|||+++.....
T Consensus        81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9 99999998642  356899999999999999999999987   999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.86  E-value=4.1e-21  Score=197.11  Aligned_cols=143  Identities=34%  Similarity=0.588  Sum_probs=123.8

Q ss_pred             eeeccCCcEEEEEEEecC-Cc--EEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD-GQ--EIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-g~--~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+|...+ +.  .+|+|.++... ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999863 43  57889886432 34556889999999999 799999999999999999999999999


Q ss_pred             CChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          562 RSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       562 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      |+|.+++....             ....+++..+..++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            99999986421             1235789999999999999999999987   9999999999999999999999999


Q ss_pred             Ccee
Q 006347          629 MAKI  632 (649)
Q Consensus       629 la~~  632 (649)
                      +++.
T Consensus       158 l~~~  161 (270)
T cd05047         158 LSRG  161 (270)
T ss_pred             Cccc
Confidence            9863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.86  E-value=2.9e-21  Score=206.63  Aligned_cols=148  Identities=27%  Similarity=0.408  Sum_probs=126.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----  550 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----  550 (649)
                      ..++|++.+.||+|+||.||++... .++.||||++....  ....+.+.+|+.+++.++|+||+++++++....     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4468999999999999999999865 68899999986532  234567889999999999999999999886543     


Q ss_pred             -eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          551 -EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       551 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                       ..++||||+++ +|.+.+.     ..+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence             46999999965 6666663     24788899999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      ++....
T Consensus       166 ~~~~~~  171 (355)
T cd07874         166 ARTAGT  171 (355)
T ss_pred             cccCCC
Confidence            987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=4.9e-21  Score=196.99  Aligned_cols=148  Identities=29%  Similarity=0.508  Sum_probs=131.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .|+..+.||+|+||.||+|... +++.+|||.+... ......++.+|+.++++++   |+|++++++++.++...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            4677789999999999999975 6899999998653 2345577889999999996   999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++..    ..+++.....++.+++.||.|||+.+   |+|+||+|+||++++++.+||+|||++..+...
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999999843    36899999999999999999999987   999999999999999999999999999887543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.86  E-value=4.8e-22  Score=190.30  Aligned_cols=153  Identities=29%  Similarity=0.371  Sum_probs=136.3

Q ss_pred             hcCcccceeeccCCcEEEEEEE-ecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EKM  553 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~-~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  553 (649)
                      .++|.+.+.||+|||.-||.++ +.++..+|+|++.....++.+..++|++.-++++||||++++.++..+.     +.|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            4678999999999999999998 4578899999998766678889999999999999999999999887544     489


Q ss_pred             EEEecCCCCChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          554 LIYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      |++.|...|+|.+.+..... ...+++.+.+.|+.+|++||++||+.. ++.+||||||.|||+.+.+.++|.|||-+..
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQ  178 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccc
Confidence            99999999999999875433 347899999999999999999999985 6899999999999999999999999998875


Q ss_pred             e
Q 006347          633 F  633 (649)
Q Consensus       633 ~  633 (649)
                      .
T Consensus       179 a  179 (302)
T KOG2345|consen  179 A  179 (302)
T ss_pred             c
Confidence            3

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.86  E-value=4.7e-21  Score=205.70  Aligned_cols=148  Identities=26%  Similarity=0.403  Sum_probs=126.6

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC------
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  549 (649)
                      ..++|++.+.||+|+||.||++... .++.||||++....  ....+++.+|+.+++.++|+||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3468999999999999999999875 68899999986532  33456788999999999999999999987643      


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ...++||||+++ +|.+++.     ..+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence            357999999965 6777663     24788899999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      |+....
T Consensus       173 a~~~~~  178 (364)
T cd07875         173 ARTAGT  178 (364)
T ss_pred             ccccCC
Confidence            987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=5.7e-21  Score=196.31  Aligned_cols=148  Identities=32%  Similarity=0.471  Sum_probs=133.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|++.+.||.|+||.||+|... +++.+|+|.+.... ......+.+|+.++++++|+|++++++++.++...++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            5777889999999999999976 68899999986543 345577899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++++|.+++..    ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||+++.+...
T Consensus        82 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  151 (274)
T cd06609          82 GGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTST  151 (274)
T ss_pred             CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence            99999999853    27899999999999999999999987   999999999999999999999999999987543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.86  E-value=4.4e-21  Score=202.83  Aligned_cols=145  Identities=21%  Similarity=0.322  Sum_probs=125.8

Q ss_pred             cceeeccC--CcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          485 LSSKLGQG--GFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       485 ~~~~LG~G--~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +.++||+|  +|++||++... +|+.||||+++...  ....+.+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            34789999  78999999876 78999999996532  233456778999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|+|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+|++||+.+..+
T Consensus        82 ~~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227          82 AYGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             CCCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            999999998543 2335899999999999999999999987   999999999999999999999999865443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=3.5e-22  Score=213.89  Aligned_cols=152  Identities=34%  Similarity=0.526  Sum_probs=134.0

Q ss_pred             ccceeeccCCcEEEEEEEec--CC--cEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          484 QLSSKLGQGGFGPVYWGRLK--DG--QEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~--~g--~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .+.++||+|.||.|++|.+.  .|  ..||||.+...... ....|++|+.+|.+|+|+|+++|||+..+ ...++|+|.
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            44579999999999999876  33  46899999765443 67899999999999999999999999988 788999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      ++.|||.+.|++ ..+..+-...+..++.|||.||.||..++   +|||||.++|+||...-.+||+||||.|-++.++.
T Consensus       192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            999999999987 35566778888999999999999999987   99999999999999999999999999999976654


Q ss_pred             cc
Q 006347          639 QA  640 (649)
Q Consensus       639 ~~  640 (649)
                      ..
T Consensus       268 ~Y  269 (1039)
T KOG0199|consen  268 MY  269 (1039)
T ss_pred             ce
Confidence            43

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.86  E-value=3.2e-21  Score=197.08  Aligned_cols=148  Identities=31%  Similarity=0.513  Sum_probs=130.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc------cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +|+..+.||+|++|.||++... +++.+|+|.+....      ....+.+..|+.++++++|+||+++++++.+++..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            4677789999999999999864 68999999986432      1135688999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~  633 (649)
                      ||||+++++|.+++.+   ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++ .+||+|||+++.+
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999999853   346889999999999999999999987   99999999999998775 5999999999877


Q ss_pred             CC
Q 006347          634 GG  635 (649)
Q Consensus       634 ~~  635 (649)
                      ..
T Consensus       155 ~~  156 (268)
T cd06630         155 AA  156 (268)
T ss_pred             cc
Confidence            54

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.86  E-value=7.5e-21  Score=194.00  Aligned_cols=152  Identities=30%  Similarity=0.496  Sum_probs=135.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||+||+|... ++..+|+|++.... ....+.+.+|+.+++.++|+|++++++.+.+++..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888999999999999999865 67899999986432 23567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++........+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            999999999965323356899999999999999999999887   99999999999999999999999999987644

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.86  E-value=7.3e-21  Score=195.98  Aligned_cols=146  Identities=31%  Similarity=0.483  Sum_probs=130.3

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      |+..++||+|+||.||+|... +++.+|||.+.... ....+.+.+|+.++.+++|+||+++++++.+++..++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            566789999999999999865 68899999886432 2345678899999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++.    ...+++.....++.+++.|+.|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        86 ~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641          86 GGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence            999999984    245889999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=2.9e-21  Score=223.19  Aligned_cols=159  Identities=25%  Similarity=0.406  Sum_probs=132.1

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--Ce
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EE  551 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~  551 (649)
                      ....++|.+.++||+|+||+||++... .+..+|+|.+...  .......|..|+.++.+|+|||||++++++.+.  ..
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            344568999999999999999999976 5778999988643  233457899999999999999999999988654  46


Q ss_pred             EEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----CceEecCCCCCcEEEcCC-------
Q 006347          552 KMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSR----LRIIHRDLKASNILLDEE-------  619 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~iiHrDlkp~NILl~~~-------  619 (649)
                      .+|||||+++|+|.++|.... ....+++..++.|+.||+.||+|||+.+.    .+||||||||+||||+.+       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            899999999999999986422 23568999999999999999999998532    349999999999999653       


Q ss_pred             ----------CceEEEecCCceeeCC
Q 006347          620 ----------LNPKISDFGMAKIFGG  635 (649)
Q Consensus       620 ----------~~~Ki~DFGla~~~~~  635 (649)
                                ..+||+|||+++.+..
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~  194 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGI  194 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccc
Confidence                      3489999999997743

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.86  E-value=6.1e-21  Score=195.26  Aligned_cols=148  Identities=32%  Similarity=0.500  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  552 (649)
                      .+|...+.||+|+||.||++... ++..+|+|++....     ....+.+.+|+.++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            47888899999999999999875 68899999886432     12345788999999999999999999998763  567


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++++||+++++|.+++..   ...+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            899999999999999853   345889999999999999999999887   99999999999999999999999999986


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      +.
T Consensus       156 ~~  157 (266)
T cd06651         156 LQ  157 (266)
T ss_pred             cc
Confidence            53

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.86  E-value=6.2e-21  Score=197.41  Aligned_cols=149  Identities=29%  Similarity=0.508  Sum_probs=124.1

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcC---CCCCccceEEEEEeC-----C
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKL---QHRNLVRLLGCCVEG-----E  550 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~-----~  550 (649)
                      +|++.+.||+|+||+||++... +++.||+|.++....  .....+.+|+.++.++   +|+||+++++++.+.     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999876 688999999864321  2234566777777665   699999999998753     3


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..++||||++ ++|.+++... ....+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            5789999997 5888888542 2345899999999999999999999987   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +.+..
T Consensus       156 ~~~~~  160 (288)
T cd07863         156 RIYSC  160 (288)
T ss_pred             ccccC
Confidence            98743

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=3.9e-21  Score=198.81  Aligned_cols=148  Identities=24%  Similarity=0.351  Sum_probs=131.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||+||++... +++.+|+|.+.... ....+++.+|++++..++|+||+++++++.+.+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            45777889999999999999876 68899999876432 34467899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++++|.+++..   ...+++.....++.+++.||.|||+..  +++||||||+||++++++.+||+|||+++.+
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620          85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence            999999998843   346899999999999999999999742  3999999999999999999999999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=1.4e-21  Score=199.11  Aligned_cols=143  Identities=29%  Similarity=0.467  Sum_probs=124.2

Q ss_pred             eeeccCCcEEEEEEEecC--------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKD--------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~--------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.||+|+||.||+|....        ..++|+|.+........+++.+|+.+++.++|+|++++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999998642        235888888655555567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc--------eEEEecCCc
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN--------PKISDFGMA  630 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--------~Ki~DFGla  630 (649)
                      +++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||+++.++.        +|++|||++
T Consensus        81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence            9999999999643  336899999999999999999999987   999999999999987765        699999998


Q ss_pred             eeeC
Q 006347          631 KIFG  634 (649)
Q Consensus       631 ~~~~  634 (649)
                      ....
T Consensus       156 ~~~~  159 (258)
T cd05078         156 ITVL  159 (258)
T ss_pred             cccC
Confidence            7654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.86  E-value=8.4e-21  Score=199.31  Aligned_cols=145  Identities=28%  Similarity=0.463  Sum_probs=119.6

Q ss_pred             ceeeccCCcEEEEEEEec---CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEEEEecCC
Q 006347          486 SSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKMLIYEYMP  560 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~  560 (649)
                      ..+||+|+||.||+|+..   ++..+|+|.++...  ....+.+|+.++.+++||||+++++++..  +...++||||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            368999999999999865   35789999986532  33567899999999999999999999864  456789999986


Q ss_pred             CCChhhhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE----cCCCceEEEecCCc
Q 006347          561 NRSLDALLFDP------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMA  630 (649)
Q Consensus       561 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~Ki~DFGla  630 (649)
                      + +|.+++...      .....+++..+..++.||+.||.|||+.+   |+||||||+|||+    ++++.+||+|||+|
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            4 777766321      12235889999999999999999999987   9999999999999    56678999999999


Q ss_pred             eeeCCC
Q 006347          631 KIFGGN  636 (649)
Q Consensus       631 ~~~~~~  636 (649)
                      +.+...
T Consensus       160 ~~~~~~  165 (317)
T cd07867         160 RLFNSP  165 (317)
T ss_pred             eccCCC
Confidence            987543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.86  E-value=6.2e-21  Score=197.82  Aligned_cols=148  Identities=32%  Similarity=0.401  Sum_probs=129.9

Q ss_pred             CcccceeeccCCcEEEEEEEe----cCCcEEEEEEecccc----cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRL----KDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~----~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~  552 (649)
                      +|++.+.||+|+||.||++..    .+|+.||+|++....    ....+++.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999986    368899999986532    22346788999999999 699999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..   ...+++.....++.|+++||.|||+.+   ++||||||+|||+++++.+||+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            999999999999999853   346888899999999999999999987   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       155 ~~~  157 (290)
T cd05613         155 FHE  157 (290)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.86  E-value=6.5e-21  Score=193.31  Aligned_cols=148  Identities=30%  Similarity=0.515  Sum_probs=134.2

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|+..+.||+|+||.||+|...+ ++.+++|.+.....  .+++.+|++++++++|+||+++++.+.++...++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            578888999999999999999874 78999999865432  688999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++..  ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+..
T Consensus        81 ~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          81 GAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            99999999853  2456899999999999999999999987   99999999999999999999999999998644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=9.3e-21  Score=199.08  Aligned_cols=150  Identities=29%  Similarity=0.358  Sum_probs=133.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|+..+.||+|+||.||++... +++.+|||.+.....   ...+.+..|++++.+++|+||+++++.+.++...++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36788899999999999999987 489999999875432   24567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++++|.+++... ....+++..+..++.|+++||+|||+.+   ++|+||||+||+++.++.+||+|||++....
T Consensus        81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            999999999998642 3356899999999999999999999987   9999999999999999999999999988653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.86  E-value=7.5e-21  Score=195.90  Aligned_cols=147  Identities=30%  Similarity=0.485  Sum_probs=131.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .|+..++||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++.++.|+||+++++++.++...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4666789999999999999976 58899999886432 345678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++++|.+++..    ..+++.....++.+++.||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+..
T Consensus        85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            99999999843    45788999999999999999999887   99999999999999999999999999987754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.86  E-value=5.1e-21  Score=195.08  Aligned_cols=143  Identities=29%  Similarity=0.536  Sum_probs=122.2

Q ss_pred             eeeccCCcEEEEEEEec----CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeEEEEEecCC
Q 006347          487 SKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEKMLIYEYMP  560 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~Ey~~  560 (649)
                      +.||+|+||.||+|...    +...+|||++... .....+.+.+|+.+++.++||||+++++++.. ++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999864    2457999998543 23456788999999999999999999998764 446789999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|.+++.+.  ...+++..++.++.|+++||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCcccccccc
Confidence            99999999642  334678888999999999999999887   9999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.86  E-value=7.9e-21  Score=199.23  Aligned_cols=150  Identities=27%  Similarity=0.471  Sum_probs=127.8

Q ss_pred             CcccceeeccCCcEEEEEEEec---CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  553 (649)
                      .|++.++||+|+||.||+|+..   +++.||||.+....   ....+.+.+|+.++.+++||||+++++++.+.  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            3677889999999999999975   37899999987632   33456788999999999999999999999988  7899


Q ss_pred             EEEecCCCCChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC----CCceEEEec
Q 006347          554 LIYEYMPNRSLDALLFDPLK--KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE----ELNPKISDF  627 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~----~~~~Ki~DF  627 (649)
                      +||||+++ +|.+++.....  ...++......++.|++.||+|||+.+   |+||||||+||++++    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 66666543221  236889999999999999999999987   999999999999999    999999999


Q ss_pred             CCceeeCC
Q 006347          628 GMAKIFGG  635 (649)
Q Consensus       628 Gla~~~~~  635 (649)
                      |+++.+..
T Consensus       157 g~~~~~~~  164 (316)
T cd07842         157 GLARLFNA  164 (316)
T ss_pred             ccccccCC
Confidence            99997643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.85  E-value=1.1e-20  Score=191.90  Aligned_cols=150  Identities=24%  Similarity=0.383  Sum_probs=130.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E  557 (649)
                      +|++.+.||+|++|.||++... +++.+|+|++....  ....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4778899999999999999876 57899999986432  3445678999999999999999999998764 446789999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++... ....+++.++..++.+++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            99999999998652 2345899999999999999999999987   99999999999999999999999999998743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.85  E-value=7.2e-21  Score=192.96  Aligned_cols=149  Identities=40%  Similarity=0.649  Sum_probs=131.2

Q ss_pred             ccceeeccCCcEEEEEEEecC-----CcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          484 QLSSKLGQGGFGPVYWGRLKD-----GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~~-----g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++.+.||+|+||.||+++..+     +..||+|.+...... ..+.+..|+..+.+++|+||+++++++.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456899999999999999763     388999999654433 57789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+++.....
T Consensus        82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       82 YMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             ccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence            999999999985421 122899999999999999999999987   999999999999999999999999999877543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.85  E-value=5.6e-21  Score=194.08  Aligned_cols=145  Identities=32%  Similarity=0.558  Sum_probs=127.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||++.. .++.+|+|.++..  ...+.+.+|+.++.+++|+|++++++++.+. ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            3577889999999999999975 4788999998643  2346889999999999999999999998754 5799999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++|.+++... ....+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++..
T Consensus        82 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          82 KGNLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             CCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceec
Confidence            99999999653 2345889999999999999999999887   999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.85  E-value=1e-20  Score=192.22  Aligned_cols=150  Identities=25%  Similarity=0.420  Sum_probs=132.6

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.+.||+|+||.||++... +++.+|+|++...  .....+++.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4778899999999999999875 6889999998643  233456899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++... ....+++..++.++.|++.||+|||+.+   ++|+||+|+||+++.++.+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            9999999988542 2335789999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=7.9e-21  Score=194.88  Aligned_cols=149  Identities=32%  Similarity=0.539  Sum_probs=125.7

Q ss_pred             cccceeeccCCcEEEEEEEec----CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------  550 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  550 (649)
                      |.+.+.||+|+||.||+|...    +++.||||.+...  .....+++.+|+.++++++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456689999999999999864    3688999988653  2334677899999999999999999999987643      


Q ss_pred             eEEEEEecCCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          551 EKMLIYEYMPNRSLDALLFDPL---KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      ..++++||+++|+|.+++....   ....+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence            2378999999999998875321   1235788999999999999999999987   999999999999999999999999


Q ss_pred             CCceeeC
Q 006347          628 GMAKIFG  634 (649)
Q Consensus       628 Gla~~~~  634 (649)
                      |+++.+.
T Consensus       158 g~~~~~~  164 (273)
T cd05074         158 GLSKKIY  164 (273)
T ss_pred             ccccccc
Confidence            9999764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.85  E-value=3.6e-21  Score=195.82  Aligned_cols=148  Identities=30%  Similarity=0.405  Sum_probs=133.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +|.+.+.||+|+||.||++... +++.+|+|.+.+..   ....+.+.+|++++++++||||+++++.+.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4778899999999999999986 58999999986532   2456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++..   ...+++.....++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            9999999999853   257889999999999999999999987   99999999999999999999999999987644

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=8.8e-21  Score=192.99  Aligned_cols=142  Identities=36%  Similarity=0.588  Sum_probs=124.2

Q ss_pred             eeeccCCcEEEEEEEec--C--CcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK--D--GQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~--~--g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ++||+|+||.||+|...  +  +..+|+|.+..... ...+++.+|+.+++++.|+||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            47999999999999764  2  26899999875443 35678999999999999999999999875 5578999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++|.+++...   ..+++..+..++.|++.||+|||+.+   ++|+||||+|||+++++.+||+|||+++.+..
T Consensus        80 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060          80 GPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             CcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeec
Confidence            9999999642   36899999999999999999999887   99999999999999999999999999997743

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.85  E-value=1e-20  Score=196.47  Aligned_cols=150  Identities=25%  Similarity=0.426  Sum_probs=128.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe-----
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE-----  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~-----  551 (649)
                      ++|++.+.||+|+||.||+|... +++.||||.++...  ....+.+.+|+.++.++ +|+||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888899999999999999976 68999999876432  22346788999999999 57999999999987766     


Q ss_pred             EEEEEecCCCCChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecC
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK--KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFG  628 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFG  628 (649)
                      .++||||+++ +|.+++.....  ...+++..+..++.||++||.|||+.+   |+||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999985 88888754322  346899999999999999999999987   999999999999998 8899999999


Q ss_pred             CceeeC
Q 006347          629 MAKIFG  634 (649)
Q Consensus       629 la~~~~  634 (649)
                      +++.+.
T Consensus       157 ~~~~~~  162 (295)
T cd07837         157 LGRAFS  162 (295)
T ss_pred             cceecC
Confidence            998763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.85  E-value=7.3e-21  Score=196.34  Aligned_cols=158  Identities=30%  Similarity=0.477  Sum_probs=135.0

Q ss_pred             CHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEe-
Q 006347          472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE-  548 (649)
Q Consensus       472 ~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~-  548 (649)
                      +..++..+.+.|++.+.||+|+||.||+|... +++.+|+|.+... .....++..|+.++.++ +|+||+++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            44555566788999999999999999999975 6889999988653 23456788999999998 79999999999864 


Q ss_pred             -----CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceE
Q 006347          549 -----GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK  623 (649)
Q Consensus       549 -----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~K  623 (649)
                           .+..+++|||+++|+|.+++... ....+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+|
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~  161 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK  161 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence                 45789999999999999998642 2345788889999999999999999987   99999999999999999999


Q ss_pred             EEecCCceeeC
Q 006347          624 ISDFGMAKIFG  634 (649)
Q Consensus       624 i~DFGla~~~~  634 (649)
                      |+|||+++...
T Consensus       162 l~dfg~~~~~~  172 (282)
T cd06636         162 LVDFGVSAQLD  172 (282)
T ss_pred             EeeCcchhhhh
Confidence            99999988653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.85  E-value=1.3e-20  Score=192.02  Aligned_cols=150  Identities=30%  Similarity=0.451  Sum_probs=135.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.+.||+|++|.||+++.. +++.++||++..... ...+++.+|+..+.+++|+|++++++++...+..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            36788899999999999999987 589999999876543 4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++|.+++..   ...+++..+..++.|+++||+|||+ .+   ++|+||+|+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~  153 (264)
T cd06623          81 MDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT  153 (264)
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence            999999999954   2568999999999999999999998 77   999999999999999999999999999987543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=9.8e-22  Score=193.84  Aligned_cols=141  Identities=28%  Similarity=0.454  Sum_probs=128.4

Q ss_pred             eeeccCCcEEEEEEE-ecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          487 SKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~-~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      +.||+|+++.|--++ +.+|.++|||++++.......+..+|++++...+ |+||++|+.|+.+++..|||||-|.+|+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            689999999999886 5689999999999887788899999999999995 99999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCCceee
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIF  633 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGla~~~  633 (649)
                      ..+|.   +...+++.+.-++..+||.||.|||.++   |.||||||+|||-.+...   +||+||.|+.-+
T Consensus       164 LshI~---~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  164 LSHIQ---KRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             HHHHH---HhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccccccc
Confidence            99884   4567899999999999999999999998   999999999999876544   799999987654

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.85  E-value=6.8e-21  Score=196.68  Aligned_cols=148  Identities=28%  Similarity=0.519  Sum_probs=130.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|++++.+++|+||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999999999876 68899999886432  22346789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.+++... ....+++..+..++.|+++||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            95 6898888542 3456899999999999999999999887   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.85  E-value=5.2e-23  Score=196.11  Aligned_cols=161  Identities=29%  Similarity=0.423  Sum_probs=134.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecc--cccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +++|++.+.||+|+|+.||++... +|+.+|+|.++.  ....+.+++.+|+.+-+.|+|||||+|.....+....|||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            456778899999999999999765 788999887753  23457889999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGla~~~  633 (649)
                      |+|.+++|-.-+-   .+...++...-..+.||+.+|.|+|.++   |||||+||+|+||...   --+|++|||+|..+
T Consensus        90 e~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen   90 DLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             ecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            9999999965542   2355788888899999999999999998   9999999999999643   34899999999999


Q ss_pred             CCCCCccccCceeecC
Q 006347          634 GGNQDQADTGRVVGTL  649 (649)
Q Consensus       634 ~~~~~~~~~~~~~GT~  649 (649)
                      ++.+.   -...+|||
T Consensus       164 ~~g~~---~~G~~GtP  176 (355)
T KOG0033|consen  164 NDGEA---WHGFAGTP  176 (355)
T ss_pred             CCccc---cccccCCC
Confidence            73332   22356665

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.1e-20  Score=193.15  Aligned_cols=148  Identities=32%  Similarity=0.522  Sum_probs=129.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-----ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-----SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  552 (649)
                      .+|.+.+.||+|+||.||++... +++.+|+|.+...     .....+.+.+|++++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            46888899999999999999875 6899999987432     123456888999999999999999999998764  457


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++|+||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999999853   345788999999999999999999987   99999999999999999999999999987


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      +.
T Consensus       156 ~~  157 (264)
T cd06653         156 IQ  157 (264)
T ss_pred             cc
Confidence            63

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.85  E-value=5.3e-21  Score=197.47  Aligned_cols=147  Identities=25%  Similarity=0.497  Sum_probs=128.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|+||.||+++.. +|+.+|+|+++...  ......+.+|+.++.+++|+||+++++++.+....++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4677889999999999999976 68899999986432  22345688899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.+++...  ...+++.....++.||++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            97 5788777432  345899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.85  E-value=5.8e-22  Score=194.88  Aligned_cols=151  Identities=28%  Similarity=0.477  Sum_probs=125.9

Q ss_pred             CcccceeeccCCcEEEEEEEec---C--CcEEEEEEecccccc-c-HHHHHHHHHHHhcCCCCCccceEEEEEe-CCeEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK---D--GQEIAVKRLSKASGQ-G-LEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~---~--g~~vAVK~l~~~~~~-~-~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~  553 (649)
                      .|+...+||+|.+|.|||++-.   +  ..++|||+++..... + -....+|+.+++.++|+||+.|..++.. +...+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            5777789999999999999644   2  237999999754221 1 2456789999999999999999999988 66789


Q ss_pred             EEEecCCCCChhhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC----CceEEEec
Q 006347          554 LIYEYMPNRSLDALLFD--PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE----LNPKISDF  627 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~----~~~Ki~DF  627 (649)
                      |++||.+. +|..+|+-  ..+.+.++...+..|+.||+.|++|||++=   |+||||||.|||+..+    |.+||+||
T Consensus       105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999976 77777752  223457888999999999999999999986   9999999999999877    89999999


Q ss_pred             CCceeeCCC
Q 006347          628 GMAKIFGGN  636 (649)
Q Consensus       628 Gla~~~~~~  636 (649)
                      ||||++...
T Consensus       181 GlaR~~~~p  189 (438)
T KOG0666|consen  181 GLARLFNNP  189 (438)
T ss_pred             cHHHHhhcc
Confidence            999998544

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.85  E-value=6.9e-21  Score=209.56  Aligned_cols=153  Identities=27%  Similarity=0.450  Sum_probs=121.5

Q ss_pred             HhcCcccceeeccCCcEEEEEEEe-----------------cCCcEEEEEEecccccccHHHH--------------HHH
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRL-----------------KDGQEIAVKRLSKASGQGLEEF--------------MNE  527 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~-----------------~~g~~vAVK~l~~~~~~~~~~f--------------~~E  527 (649)
                      ..++|++.++||+|+||+||+|..                 ..++.||||++........++|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999964                 2356899999865332223333              346


Q ss_pred             HHHHhcCCCCCc-----cceEEEEEe--------CCeEEEEEecCCCCChhhhhcCCC---------------------C
Q 006347          528 VMVISKLQHRNL-----VRLLGCCVE--------GEEKMLIYEYMPNRSLDALLFDPL---------------------K  573 (649)
Q Consensus       528 ~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~  573 (649)
                      +..+.+++|.++     ++++++|..        .+..+|||||+++++|.++|+...                     .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777766554     678888764        356899999999999999986421                     1


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       574 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ...++|..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence            123577888999999999999999987   9999999999999999999999999998653

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=1e-20  Score=195.60  Aligned_cols=150  Identities=28%  Similarity=0.438  Sum_probs=131.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||+|... +++.||||.++..  .....+.+.+|++++++++|+||+++++++.+++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36888899999999999999977 5889999988643  23345789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |++++.|..++.   +...+++..+..++.+|+.||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999877776653   2345899999999999999999999987   999999999999999999999999999887543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.85  E-value=1.1e-20  Score=196.26  Aligned_cols=150  Identities=29%  Similarity=0.458  Sum_probs=130.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV  555 (649)
                      ++|+..+.||+|+||.||+|... +++.+|+|.++...  ......+.+|+.++.+++|+||+++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46777889999999999999987 68899999986432  22234677899999999999999999999887  889999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||++ ++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        85 ~e~~~-~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVE-HDLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcC-cCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            99997 5898888542  236899999999999999999999987   99999999999999999999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       159 ~  159 (293)
T cd07843         159 P  159 (293)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.85  E-value=1.7e-20  Score=196.35  Aligned_cols=148  Identities=32%  Similarity=0.527  Sum_probs=129.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..|+..+.||+|+||.||+|+.. +++.||+|.+.....   ...+++.+|++++++++|+||+++++++.+++..++||
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            45777889999999999999876 688999998864322   33467899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||++ |+|.+++..  ....+++..+..++.|++.||.|||+.+   |+|+||+|+||++++++.+||+|||+++...
T Consensus        95 e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          95 EYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            9996 677777642  2346899999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.1e-20  Score=193.42  Aligned_cols=153  Identities=31%  Similarity=0.489  Sum_probs=133.6

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC-----
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE-----  550 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~-----  550 (649)
                      .++++|++.+.||+|+||.||+|... +++.+++|.+.... ...+++.+|+.++.++ +|+||+++++++.+..     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            35678999999999999999999986 57899999986543 3457899999999999 7999999999998755     


Q ss_pred             -eEEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          551 -EKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       551 -~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                       ..++||||+++++|.+++.... ....+++..+..++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence             4899999999999999986422 2456899999999999999999999987   9999999999999999999999999


Q ss_pred             CceeeC
Q 006347          629 MAKIFG  634 (649)
Q Consensus       629 la~~~~  634 (649)
                      +++...
T Consensus       159 ~~~~~~  164 (275)
T cd06608         159 VSAQLD  164 (275)
T ss_pred             cceecc
Confidence            998753

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.85  E-value=2.1e-20  Score=189.52  Aligned_cols=150  Identities=29%  Similarity=0.447  Sum_probs=131.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|...+.||+|+||.||++... +++.+|||.+...  .....+++.+|+.++++++|+|++++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4778899999999999999875 6889999998653  234567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++... ....+++..+..++.++++||+|||+.+   ++|+||||+||+++++ ..+||+|||+++.+..
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            9999999999652 2345899999999999999999999987   9999999999999854 5689999999997753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.85  E-value=5.3e-21  Score=185.68  Aligned_cols=142  Identities=17%  Similarity=0.153  Sum_probs=110.3

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccc--c-------HHHH-----------------HHHHHHHhcCCCCCc
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--G-------LEEF-----------------MNEVMVISKLQHRNL  539 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~ni  539 (649)
                      .+.||+|+||.||+|...+|+.||||+++.....  .       ...|                 ..|+..+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3689999999999999888999999998653211  1       1122                 349999999988776


Q ss_pred             cceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEecCCCCCcEEEcC
Q 006347          540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL-HRDSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       540 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlkp~NILl~~  618 (649)
                      .....+.  ....+|||||+++++|...+.   ....++..+...++.|++.+|.|| |+.+   |+||||||+|||+++
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~  153 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD  153 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence            4433332  233489999999887765432   234688999999999999999999 5766   999999999999984


Q ss_pred             CCceEEEecCCceeeCCC
Q 006347          619 ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~~  636 (649)
                       +.+||+|||+|.....+
T Consensus       154 -~~v~LiDFG~a~~~~~~  170 (190)
T cd05147         154 -GKLYIIDVSQSVEHDHP  170 (190)
T ss_pred             -CcEEEEEccccccCCCc
Confidence             78999999999876443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=7.4e-22  Score=221.85  Aligned_cols=170  Identities=27%  Similarity=0.315  Sum_probs=144.5

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecc---cccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ..+++....+|.+.+.||+|+||.|..+++. +++.+|+|++++   .......-|..|-.+|.--+.+=|++|+-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            3455666678999999999999999999986 678899999976   233455678889999998899999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      ..+.|+|||||+||+|-.++.+.   .+++......++..|.-||.-||+-+   +|||||||+|||||..|++|++|||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~---~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKF---DRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhc---CCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence            99999999999999999999542   36888888888999999999999877   9999999999999999999999999


Q ss_pred             CceeeCCCCCccccCceeecC
Q 006347          629 MAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       629 la~~~~~~~~~~~~~~~~GT~  649 (649)
                      -+-.+..+..- .....+|||
T Consensus       221 sClkm~~dG~V-~s~~aVGTP  240 (1317)
T KOG0612|consen  221 SCLKMDADGTV-RSSVAVGTP  240 (1317)
T ss_pred             hHHhcCCCCcE-EeccccCCC
Confidence            88887654433 334578997

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3e-20  Score=187.93  Aligned_cols=148  Identities=32%  Similarity=0.518  Sum_probs=133.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.+.||+|++|.||+++.. +++.+|+|.+.....  ...+.+.+|++++.+++|+|++++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4677899999999999999876 678999999876543  4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||+++....
T Consensus        81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  151 (254)
T cd06627          81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLND  151 (254)
T ss_pred             CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence            999999999853   256899999999999999999999887   99999999999999999999999999998754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.84  E-value=2.2e-20  Score=193.49  Aligned_cols=145  Identities=28%  Similarity=0.479  Sum_probs=129.6

Q ss_pred             ccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          484 QLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      ...+.||+|++|.||++... +++.+++|++........+.+.+|+.++++++|+||+++++++..++..++|+||++++
T Consensus        22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            33469999999999999865 68899999986554455677899999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +|.+++..    ..+++.++..++.|++.||+|||+.+   |+||||+|+||++++++.+||+|||+++....
T Consensus       102 ~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648         102 ALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            99999843    45889999999999999999999987   99999999999999999999999999886543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.84  E-value=1.5e-21  Score=220.97  Aligned_cols=149  Identities=34%  Similarity=0.522  Sum_probs=123.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC-------
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-------  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------  549 (649)
                      ..++|.+.+.||+||||.|||++.+ ||+.+|||+|... +........+|+.++++|+|||||+++..+++.       
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            4467888899999999999999987 8999999999654 334556788999999999999999887654221       


Q ss_pred             --------------------------------------------------------------------------------
Q 006347          550 --------------------------------------------------------------------------------  549 (649)
Q Consensus       550 --------------------------------------------------------------------------------  549 (649)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             --------------------------------CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006347          550 --------------------------------EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH  597 (649)
Q Consensus       550 --------------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH  597 (649)
                                                      .-.||-||||+.-.|.+++.++.-..  .-...++++++|+.||+|+|
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHH
Confidence                                            01367789998888888875432111  35667889999999999999


Q ss_pred             hCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       598 ~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +.+   ||||||||.||+||++..+||+|||+|..
T Consensus       715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             hCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence            998   99999999999999999999999999997

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.84  E-value=1.6e-20  Score=195.74  Aligned_cols=152  Identities=28%  Similarity=0.519  Sum_probs=130.6

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC----
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE----  550 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----  550 (649)
                      ...++|++.+.||+|+||.||+|+.. +++.||||+++...  ......+.+|++++++++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            34567889999999999999999986 58899999986532  233457788999999999999999999987655    


Q ss_pred             ------eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          551 ------EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       551 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                            ..++|+||+++ +|..++..  ....+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence                  78999999976 67777643  2346899999999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeCC
Q 006347          625 SDFGMAKIFGG  635 (649)
Q Consensus       625 ~DFGla~~~~~  635 (649)
                      +|||+++.+..
T Consensus       158 ~dfg~~~~~~~  168 (302)
T cd07864         158 ADFGLARLYNS  168 (302)
T ss_pred             CcccccccccC
Confidence            99999987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.84  E-value=1.9e-20  Score=194.82  Aligned_cols=142  Identities=28%  Similarity=0.488  Sum_probs=128.1

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChh
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD  565 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  565 (649)
                      .+||+|+||.||++... +++.||||++..........+.+|+.++++++|+|++++++.+.+++..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            58999999999999875 78999999986544455677999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          566 ALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       566 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++..    ..+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||++..+..
T Consensus       106 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~  168 (292)
T cd06657         106 DIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  168 (292)
T ss_pred             HHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence            98742    35789999999999999999999987   99999999999999999999999999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.84  E-value=7.4e-21  Score=194.68  Aligned_cols=144  Identities=37%  Similarity=0.565  Sum_probs=124.9

Q ss_pred             eeccCCcEEEEEEEecC-------CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          488 KLGQGGFGPVYWGRLKD-------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~~-------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .||+|+||.||+|+..+       +..+|||.+.... .....++.+|+.++++++|+||+++++++..++..++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            68999999999998642       2579999886533 245678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-----ceEEEecCCc
Q 006347          560 PNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-----NPKISDFGMA  630 (649)
Q Consensus       560 ~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-----~~Ki~DFGla  630 (649)
                      ++++|.+++.+..    ....+++.+++.++.|++.||.|||+.+   ++|+||||+||+++.+.     .+|++|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            9999999996422    2234789999999999999999999887   99999999999999877     8999999999


Q ss_pred             eeeC
Q 006347          631 KIFG  634 (649)
Q Consensus       631 ~~~~  634 (649)
                      +.+.
T Consensus       159 ~~~~  162 (269)
T cd05044         159 RDIY  162 (269)
T ss_pred             cccc
Confidence            8653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=8.8e-21  Score=211.82  Aligned_cols=153  Identities=23%  Similarity=0.405  Sum_probs=120.6

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecC--CcEEEEE------------------EecccccccHHHHHHHHHHHhcCCCCC
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKD--GQEIAVK------------------RLSKASGQGLEEFMNEVMVISKLQHRN  538 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~--g~~vAVK------------------~l~~~~~~~~~~f~~E~~~l~~l~H~n  538 (649)
                      ..++|++.++||+|+||+||++..+.  +...++|                  ++. ........+.+|+.++.+++|+|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence            34689999999999999999987542  2222222                  111 11223467889999999999999


Q ss_pred             ccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK--KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       539 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      ||++++++.+.+..++|+|++. ++|.+++.....  ...........|+.||+.||.|||+.+   ||||||||+|||+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence            9999999999999999999984 577777643211  122335567789999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCC
Q 006347          617 DEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +.++.+||+|||+|+.+...
T Consensus       301 ~~~~~vkL~DFGla~~~~~~  320 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKE  320 (501)
T ss_pred             CCCCCEEEEeCCCceecCcc
Confidence            99999999999999987543

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.84  E-value=1.6e-20  Score=193.48  Aligned_cols=142  Identities=30%  Similarity=0.429  Sum_probs=125.5

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||+||++... +++.+|+|.+....   ....+.+..|++++++++|+||+++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999865 68899999986432   23355678899999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .+++... ....+++.++..++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~~~l~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~  146 (277)
T cd05577          81 KYHIYNV-GEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence            9998653 2246899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.84  E-value=4.5e-20  Score=185.86  Aligned_cols=150  Identities=34%  Similarity=0.597  Sum_probs=135.5

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      +|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+|++++++++......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            3667789999999999999986 688999999976554567889999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++|.+++...  ...+++..+..++.+++.||+|||+.+   ++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          81 GGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            99999998542  256899999999999999999999977   999999999999999999999999999887544

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=1.8e-20  Score=194.16  Aligned_cols=151  Identities=28%  Similarity=0.407  Sum_probs=130.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  556 (649)
                      ++|...++||.|++|.||++... +++.+|+|.+..... ....++.+|++++++++|+||+++++++.+.  ...++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            36778899999999999999986 688999999875332 3557799999999999999999999998754  3689999


Q ss_pred             ecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||+++++|.+++... .....+++.....++.|+++||+|||+.+   ++|+||+|+||++++++.+||+|||++....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            999999999887532 13455888999999999999999999987   9999999999999999999999999988653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.84  E-value=1.8e-20  Score=191.88  Aligned_cols=153  Identities=30%  Similarity=0.516  Sum_probs=128.9

Q ss_pred             CcccceeeccCCcEEEEEEEecC--CcEEEEEEeccc----------ccccHHHHHHHHHHHhc-CCCCCccceEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD--GQEIAVKRLSKA----------SGQGLEEFMNEVMVISK-LQHRNLVRLLGCCVE  548 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~--g~~vAVK~l~~~----------~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~  548 (649)
                      +|++.+.||+|+||.||+|....  ++.+|||.+...          ......++..|+.++.+ ++|+||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46778899999999999999864  678999987532          12234567889888875 699999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      ++..++||||+++++|.+++... .....+++..++.++.|++.||.|||+..  +++|+||+|+||++++++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence            99999999999999999887431 23456889999999999999999999632  3999999999999999999999999


Q ss_pred             CCceeeCCC
Q 006347          628 GMAKIFGGN  636 (649)
Q Consensus       628 Gla~~~~~~  636 (649)
                      |++......
T Consensus       159 g~~~~~~~~  167 (269)
T cd08528         159 GLAKQKQPE  167 (269)
T ss_pred             cceeecccc
Confidence            999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.84  E-value=2e-20  Score=190.36  Aligned_cols=155  Identities=28%  Similarity=0.492  Sum_probs=130.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~  556 (649)
                      +|++.+.||.|+||.||++... +++.+|+|.+...  .....+++..|+.++++++|+||+++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4677889999999999999865 6789999988643  23345678899999999999999999998764  44678999


Q ss_pred             ecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDS--RLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++++|.+++... .....+++.....++.+++.||+|||..+  ..+++|+||||+||++++++.+||+|||+++.+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998542 22457899999999999999999999332  334999999999999999999999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       161 ~~~  163 (265)
T cd08217         161 GHD  163 (265)
T ss_pred             cCC
Confidence            543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.84  E-value=1.6e-20  Score=190.52  Aligned_cols=150  Identities=25%  Similarity=0.465  Sum_probs=131.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|+..+.||+|+||.||++... ++..+|+|.+....  ....+.+.+|+.++++++|+||+++++.+.+++..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4778899999999999999986 58899999986432  23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++.+. ....+++..+..++.++++||.|||+.+   ++|+||||+||++++++ .+||+|||++..+..
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            9999999998642 2335799999999999999999999987   99999999999999875 579999999987754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.84  E-value=3.3e-20  Score=187.67  Aligned_cols=150  Identities=35%  Similarity=0.526  Sum_probs=134.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  556 (649)
                      +|+..+.||+|++|.||+|... +++.|++|.+.....  ...+.+.+|+.++++++|+||+++++.+.+.  +..++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            3677789999999999999987 688999999865432  4578899999999999999999999999988  8899999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++...   ..+++..+..++.++++||+|||+.+   ++|+||+|+||++++++.+||+|||.+......
T Consensus        81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            999999999998542   37899999999999999999999987   999999999999999999999999999987554


Q ss_pred             C
Q 006347          637 Q  637 (649)
Q Consensus       637 ~  637 (649)
                      .
T Consensus       155 ~  155 (260)
T cd06606         155 E  155 (260)
T ss_pred             c
Confidence            3

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=2.6e-20  Score=192.71  Aligned_cols=150  Identities=29%  Similarity=0.524  Sum_probs=135.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .+++|+..+.||+|++|.||++... ++..+|+|.+..... ..+.+.+|++++++++|+|++++++.+...+..++|+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4566788889999999999999987 688999999975443 56789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++++|.+++....  ..+++..+..++.+++.||+|||+.+   |+|+||+|+||+++.++.+||+|||++....
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            999999999996421  37899999999999999999999977   9999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.84  E-value=4.8e-20  Score=191.54  Aligned_cols=149  Identities=28%  Similarity=0.494  Sum_probs=127.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|++|.||+|... +++.||||.+....  ....+.+.+|+.++++++|+||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888899999999999999976 68899999886432  2334678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~  634 (649)
                      |++ ++|.+++... ....+++.....++.||+.||+|||+.+   ++|+||+|+||++++ +..+||+|||+++...
T Consensus        82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            996 5787777432 2234678888899999999999999987   999999999999985 5679999999998754

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.84  E-value=1.5e-20  Score=191.87  Aligned_cols=148  Identities=28%  Similarity=0.408  Sum_probs=132.1

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +|+..+.||+|+||.||++... +++.+|+|++.... ....+++.+|+.++++++|+||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            5677789999999999999987 68899999987543 345578999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++...  ...++......++.|+++||+|||+ .+   ++|+||||+||++++++.+||+|||+++.+.
T Consensus        82 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          82 DGGSLDKILKEV--QGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             CCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            999999998542  2568899999999999999999998 66   9999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.84  E-value=3.3e-20  Score=191.30  Aligned_cols=148  Identities=30%  Similarity=0.534  Sum_probs=130.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEEEe
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLIYE  557 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E  557 (649)
                      |++.++||+|+||.||+|+.. +++.+|+|++....  ....+.+.+|+.++.+++|+|++++++++.+.  ...++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            556789999999999999977 58899999997653  33456788999999999999999999999988  88999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++ +|.+++...  ...+++..++.++.|+++||+|||+.+   ++|+||||+||++++++.+||+|||+++.....
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9975 898888542  246899999999999999999999987   999999999999999999999999999987544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.84  E-value=3e-20  Score=191.90  Aligned_cols=141  Identities=30%  Similarity=0.362  Sum_probs=118.9

Q ss_pred             eeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHh---cCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVIS---KLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~---~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .||+|+||.||++... +++.+|||.+.+..   ......+.+|..++.   ..+|+|++++++.+.+.+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999875 68899999886432   122233445554433   3479999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            9999999853   346899999999999999999999987   9999999999999999999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.84  E-value=2.9e-20  Score=189.62  Aligned_cols=141  Identities=30%  Similarity=0.401  Sum_probs=126.6

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||.|+||.||+++.. +++.+|+|.+.+..   ....+.+.+|+.++++++|+||+++++.+.+++..++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999987 48899999986532   23457899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      .+++.+   ...+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.+||+|||+++....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            999954   345889999999999999999999987   99999999999999999999999999998754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-21  Score=192.06  Aligned_cols=161  Identities=29%  Similarity=0.330  Sum_probs=137.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|..++.||+|.||.|..++.+ +++.+|||++++..   ..+...-+.|-++|...+||.+..|--.+...++.+.||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            57888899999999999999876 78999999998753   234456678999999999999999998999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||..+|.|.-+|.   +.+.+++.....+-..|..||.|||+.+   ||.||||.+|.|||.++++||+||||++.-...
T Consensus       248 eyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  248 EYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             EEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc
Confidence            9999999988873   4567888877788999999999999988   999999999999999999999999999964322


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      .  ..+.+..|||
T Consensus       322 g--~t~kTFCGTP  332 (516)
T KOG0690|consen  322 G--DTTKTFCGTP  332 (516)
T ss_pred             c--ceeccccCCh
Confidence            2  2344578885

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.84  E-value=1.4e-20  Score=191.48  Aligned_cols=140  Identities=32%  Similarity=0.481  Sum_probs=126.2

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||.||+++.. +++.+|+|.+.....   ...+.+.+|+.++.+++|+||+++++.+.++...++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999987 489999999865432   4567889999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .+++.+.   ..+++..+..++.|+++||+|||+.+   ++|+||+|+||++++++.+||+|||++....
T Consensus        81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~  144 (265)
T cd05579          81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGL  144 (265)
T ss_pred             HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence            9998542   36899999999999999999999987   9999999999999999999999999988753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=2.1e-20  Score=198.51  Aligned_cols=149  Identities=30%  Similarity=0.542  Sum_probs=128.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeC--CeE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~  552 (649)
                      ..++|++.+.||+|+||.||+|... +++.+|||++...  .......+.+|+.++.++ +|+||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3467888899999999999999976 6889999988542  233456788899999999 999999999998754  368


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            99999997 599888843    26789999999999999999999987   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       157 ~~~  159 (337)
T cd07852         157 LSE  159 (337)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.84  E-value=3.9e-20  Score=179.94  Aligned_cols=143  Identities=20%  Similarity=0.243  Sum_probs=113.4

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccc--c------------------------HHHHHHHHHHHhcCCCCCc
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--G------------------------LEEFMNEVMVISKLQHRNL  539 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--~------------------------~~~f~~E~~~l~~l~H~ni  539 (649)
                      ...||+|+||+||+|...+|+.||||.++.....  .                        ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3689999999999999888999999998754211  0                        1123578999999999987


Q ss_pred             cceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcC
Q 006347          540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       540 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~  618 (649)
                      .....+...  +.+|||||++++++.....   ....++..+...++.+++.++.+||+ .+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence            655544333  3489999999886544321   23457788889999999999999999 77   99999999999999 


Q ss_pred             CCceEEEecCCceeeCCCC
Q 006347          619 ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++.++|+|||+|+.+..+.
T Consensus       153 ~~~~~liDFG~a~~~~~~~  171 (190)
T cd05145         153 DGKPYIIDVSQAVELDHPN  171 (190)
T ss_pred             CCCEEEEEcccceecCCCC
Confidence            8899999999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.9e-22  Score=209.60  Aligned_cols=161  Identities=27%  Similarity=0.444  Sum_probs=138.8

Q ss_pred             CcccceeeccCCcEEEEEEEecC-CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .|.++..||.|+||.|||++.++ +...|.|.|...++...+.|+-|+++|+...||+||+|++.+...+..+|..|||.
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~  112 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG  112 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence            45667899999999999999874 44567888887778888999999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCcc
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA  640 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  640 (649)
                      ||-.+.++..  -...|....+.-++++++.||.|||++.   |||||||+.|||+.-+|.++++|||.+........+.
T Consensus       113 GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  113 GGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             CchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence            9999998854  3467899999999999999999999998   9999999999999999999999999876653332222


Q ss_pred             ccCceeecC
Q 006347          641 DTGRVVGTL  649 (649)
Q Consensus       641 ~~~~~~GT~  649 (649)
                      .  ++.|||
T Consensus       188 D--sFIGTP  194 (1187)
T KOG0579|consen  188 D--SFIGTP  194 (1187)
T ss_pred             c--cccCCc
Confidence            2  367775

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.84  E-value=3.9e-21  Score=197.54  Aligned_cols=155  Identities=29%  Similarity=0.401  Sum_probs=137.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +.|+.-+.||+|+||.||-+... +|+-+|.|++.+.   ..+++...++|-.++.+++.+.||.|--.+...+..+||+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            45777789999999999999876 6889999988653   3456778899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ..|.||+|.-+|... .+..+++.....+|.+|+.||++||...   ||.|||||+|||||+.|+++|+|+|||..+...
T Consensus       265 tlMNGGDLkfHiyn~-g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNH-GNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EeecCCceeEEeecc-CCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            999999999999764 3467999999999999999999999887   999999999999999999999999999998655


Q ss_pred             CCc
Q 006347          637 QDQ  639 (649)
Q Consensus       637 ~~~  639 (649)
                      +..
T Consensus       341 ~~~  343 (591)
T KOG0986|consen  341 KPI  343 (591)
T ss_pred             Ccc
Confidence            543

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.84  E-value=1.4e-20  Score=193.51  Aligned_cols=149  Identities=32%  Similarity=0.492  Sum_probs=133.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|.+.+.||+|+||.||+++.. +++.+|+|.+.+.   .....+.+..|+.++.+++ |+||+++++++.+++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888899999999999999976 6899999998652   2234567889999999998 99999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++.+   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+|++|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999999954   346999999999999999999999987   99999999999999999999999999998754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=1.9e-20  Score=207.81  Aligned_cols=152  Identities=22%  Similarity=0.289  Sum_probs=122.9

Q ss_pred             HHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCC------CCccceEEEE
Q 006347          474 EELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH------RNLVRLLGCC  546 (649)
Q Consensus       474 ~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H------~niv~l~g~~  546 (649)
                      +++....++|++.++||+|+||+||++... .++.||||+++.. ....+++..|+.++.+++|      .+++++++++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            344556688999999999999999999875 5788999998643 2334556677777777654      4588899888


Q ss_pred             EeC-CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCC----
Q 006347          547 VEG-EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEEL----  620 (649)
Q Consensus       547 ~~~-~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~----  620 (649)
                      ... .+.++|||++ +++|.+++.+   ...+++..+..|+.||+.||+|||++ +   ||||||||+|||++.++    
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~  273 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVD  273 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccc
Confidence            764 4788999988 7788888853   35689999999999999999999974 5   99999999999998765    


Q ss_pred             ------------ceEEEecCCceee
Q 006347          621 ------------NPKISDFGMAKIF  633 (649)
Q Consensus       621 ------------~~Ki~DFGla~~~  633 (649)
                                  .+||+|||++...
T Consensus       274 ~~~~~~~~~~~~~vkl~DfG~~~~~  298 (467)
T PTZ00284        274 PVTNRALPPDPCRVRICDLGGCCDE  298 (467)
T ss_pred             cccccccCCCCceEEECCCCccccC
Confidence                        4999999988643

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.84  E-value=3.6e-20  Score=197.29  Aligned_cols=150  Identities=25%  Similarity=0.448  Sum_probs=129.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC----
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE----  550 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----  550 (649)
                      ...++|++.+.||+|+||.||++... ++..||||++....  ....+.+.+|+.++++++|+||+++++++....    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            34578999999999999999999865 78999999985432  223457889999999999999999999987654    


Q ss_pred             --eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          551 --EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       551 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                        ..++||||+ +++|.+++.    ...+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg  163 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG  163 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecc
Confidence              358999999 779988874    246899999999999999999999987   9999999999999999999999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +++....
T Consensus       164 ~~~~~~~  170 (343)
T cd07880         164 LARQTDS  170 (343)
T ss_pred             ccccccc
Confidence            9987643

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.84  E-value=5.7e-20  Score=193.44  Aligned_cols=146  Identities=34%  Similarity=0.555  Sum_probs=127.5

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |+..+.||+|+||.||+++.. ++..+|+|.+....   ....+++.+|+.++++++|+|++++++++.+++..++||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            566789999999999999975 68899999986432   23345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ |+|.+++..  ....+++..+..++.+++.||.|||+.+   |+||||+|+||+++.++.+||+|||++....
T Consensus       107 ~~-g~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         107 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            96 578777643  2456899999999999999999999987   9999999999999999999999999988654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.84  E-value=4.1e-20  Score=193.65  Aligned_cols=150  Identities=31%  Similarity=0.503  Sum_probs=128.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  554 (649)
                      .++|++.+.||+|+||.||+|... +|+.||+|.++....  .....+.+|+.++.+++|+||+++++++.+.  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            357888899999999999999976 689999999864322  2234567899999999999999999998765  46899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||++ ++|.+++...  ...+++.++..++.|+++||+|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCE-QDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            999996 4888887542  356899999999999999999999988   9999999999999999999999999999875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       160 ~  160 (309)
T cd07845         160 L  160 (309)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.84  E-value=2.9e-20  Score=197.33  Aligned_cols=148  Identities=28%  Similarity=0.470  Sum_probs=127.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~  552 (649)
                      .++|++.++||+|+||.||+|... +++.||||.++... ......+.+|+.++.+++|+||+++++++....     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            467999999999999999999865 68999999986432 234567889999999999999999999876543     57


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++|+||++ ++|.+++.    ...+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELME-TDLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhcc-cCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence            99999996 48877773    346899999999999999999999987   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      ...
T Consensus       156 ~~~  158 (336)
T cd07849         156 ADP  158 (336)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.83  E-value=4.7e-20  Score=189.93  Aligned_cols=146  Identities=25%  Similarity=0.419  Sum_probs=124.9

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCccceEEEEEeC--CeEEEEEe
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEG--EEKMLIYE  557 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~E  557 (649)
                      |++.++||+|+||.||+|+.. +++.+|+|+++... .........|+.++.++. |+|++++++++.++  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            556789999999999999875 68899999986532 223345567899999985 99999999999988  88999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |++ ++|.+++..  ....+++.++..++.|++.||+|||+.+   ++||||||+||++++ +.+||+|||+++.+..
T Consensus        81 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          81 LMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            996 588888754  2356899999999999999999999987   999999999999999 9999999999987643

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.83  E-value=7.4e-20  Score=185.20  Aligned_cols=152  Identities=26%  Similarity=0.476  Sum_probs=135.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.+.||+|+||.||++... ++..+|+|++.....  ...+++.+|++++++++|+|++++++.+.++...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777899999999999999976 688999999875432  4567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++|.+++.... ....+++..+..++.+++.||+|||+.+   ++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            99999999986532 2367899999999999999999999987   999999999999999999999999999887544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.83  E-value=4.6e-20  Score=192.73  Aligned_cols=149  Identities=30%  Similarity=0.538  Sum_probs=127.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-------  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------  550 (649)
                      ++|++.++||+|+||.||++... +++.||||.+....  ......+.+|+.++++++||||+++++++....       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            46888999999999999999976 68899999885432  223345678999999999999999999988654       


Q ss_pred             -eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          551 -EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       551 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                       ..++||||++ ++|.+++..  ....+++.+...++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence             3499999996 578887743  2346899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      ++.+..
T Consensus       166 ~~~~~~  171 (310)
T cd07865         166 ARAFSL  171 (310)
T ss_pred             cccccC
Confidence            987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.83  E-value=4.7e-20  Score=190.33  Aligned_cols=147  Identities=30%  Similarity=0.522  Sum_probs=128.9

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      |+..++||.|++|.||+|... +|..||||++....  ....+.+.+|++++++++|+|++++++++.+++..++||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            456789999999999999875 78999999986432  223467889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      + ++|.+++... ....+++..+..++.|+++||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~-~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835          81 D-LDLKKYMDSS-PLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             C-cCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            5 6899988542 2246899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.83  E-value=5.6e-20  Score=189.73  Aligned_cols=141  Identities=30%  Similarity=0.344  Sum_probs=118.9

Q ss_pred             eeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHH---HhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMV---ISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~---l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .||+|+||.||++... +++.||||.+.+...   .....+..|..+   +....|+||+++++.+.+.+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999875 588999998865321   222334455443   444579999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            9999998843   356899999999999999999999987   9999999999999999999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.83  E-value=6.2e-20  Score=195.60  Aligned_cols=154  Identities=29%  Similarity=0.422  Sum_probs=131.5

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG  549 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  549 (649)
                      ..++...+++|.+.+.||+|+||.||++... +++.||||++....  ....+.+.+|+.++.+++|+||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            3456667889999999999999999999864 68899999986532  22356788999999999999999999988653


Q ss_pred             ------CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceE
Q 006347          550 ------EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK  623 (649)
Q Consensus       550 ------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~K  623 (649)
                            ...++++|++ +++|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence                  3467888876 7899888742    35899999999999999999999987   99999999999999999999


Q ss_pred             EEecCCceeeC
Q 006347          624 ISDFGMAKIFG  634 (649)
Q Consensus       624 i~DFGla~~~~  634 (649)
                      |+|||+++...
T Consensus       161 l~dfg~~~~~~  171 (345)
T cd07877         161 ILDFGLARHTD  171 (345)
T ss_pred             Eeccccccccc
Confidence            99999998753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.83  E-value=6.8e-20  Score=195.90  Aligned_cols=148  Identities=28%  Similarity=0.435  Sum_probs=127.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC------
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  549 (649)
                      ..++|+..+.||+|+||.||++... +++.||||.+.+.  .....+++.+|+.++.+++|+||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            3467999999999999999999875 7899999998643  233456788999999999999999999988644      


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ...++||||++ ++|.+.+..     .++...+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence            35699999995 588887732     2788899999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      ++....
T Consensus       165 ~~~~~~  170 (353)
T cd07850         165 ARTAGT  170 (353)
T ss_pred             ceeCCC
Confidence            998644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.83  E-value=3.1e-20  Score=196.93  Aligned_cols=148  Identities=24%  Similarity=0.450  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  553 (649)
                      .+|++.+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+.++.+++|+||+++++++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            67888899999999999999876 68999999987532  2345678889999999999999999998763    34689


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+. ++|.+++..   ...+++.....++.||++||+|||+.+   |+||||||+||++++++.+||+|||+++.+
T Consensus        85 lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          85 VVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence            9999995 689888843   345899999999999999999999987   999999999999999999999999999876


Q ss_pred             CC
Q 006347          634 GG  635 (649)
Q Consensus       634 ~~  635 (649)
                      ..
T Consensus       158 ~~  159 (334)
T cd07855         158 SS  159 (334)
T ss_pred             cc
Confidence            43

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.83  E-value=4.7e-20  Score=191.02  Aligned_cols=148  Identities=32%  Similarity=0.398  Sum_probs=129.2

Q ss_pred             CcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc----cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS----GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~  552 (649)
                      +|++.+.||+|++|.||+++..    +++.+|||.+.+..    ....+.+.+|+.++.++ +|+||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            3677899999999999999753    57889999986432    23446788999999999 699999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..   ...+++.....++.|+++||.|||+.+   ++|+||||+||++++++.+||+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence            999999999999999853   346889999999999999999999887   99999999999999999999999999987


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       155 ~~~  157 (288)
T cd05583         155 FLA  157 (288)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.5e-20  Score=201.09  Aligned_cols=155  Identities=33%  Similarity=0.477  Sum_probs=133.5

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChh
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD  565 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  565 (649)
                      -.||+|.+|+||-|+.. +...+|||-+.....+..+-+..|+.+-++++|.|||+++|.|.+++..-|.||-.|||||.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            37999999999999976 46689999998766677788999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCCCCCcccc
Q 006347          566 ALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGGNQDQADT  642 (649)
Q Consensus       566 ~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~~~~~~~~  642 (649)
                      +.|+..  =+++  ++.+.-.+-+||++||.|||++.   |||||||-+|+|++- .|.+||+|||-++.+.+-.  ..|
T Consensus       661 sLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~T  733 (1226)
T KOG4279|consen  661 SLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCT  733 (1226)
T ss_pred             HHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC--ccc
Confidence            999653  2344  67888889999999999999998   999999999999974 6899999999999875422  234


Q ss_pred             Cceeec
Q 006347          643 GRVVGT  648 (649)
Q Consensus       643 ~~~~GT  648 (649)
                      .+.-||
T Consensus       734 ETFTGT  739 (1226)
T KOG4279|consen  734 ETFTGT  739 (1226)
T ss_pred             cccccc
Confidence            445565

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.1e-20  Score=186.53  Aligned_cols=142  Identities=24%  Similarity=0.360  Sum_probs=121.1

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHH-hcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVI-SKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.||+|+||.||+|... +++.||||.+++..   ......+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999875 68899999986532   12233455565544 445899999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++...
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceecc
Confidence            999999853   346889999999999999999999987   9999999999999999999999999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.82  E-value=6.2e-20  Score=194.93  Aligned_cols=149  Identities=24%  Similarity=0.469  Sum_probs=128.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----e
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----E  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~  551 (649)
                      .++|.+.+.||+|+||+||+++.. +++.||||.+...  ......++.+|+.++.+++|+||+++++++....     .
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            357888999999999999999875 6899999998653  2334567788999999999999999999887543     4


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+. ++|.+++..   ...+++.....++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++
T Consensus        84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999995 689888843   356899999999999999999999987   9999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      ....
T Consensus       157 ~~~~  160 (337)
T cd07858         157 TTSE  160 (337)
T ss_pred             ccCC
Confidence            7643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.82  E-value=1.3e-19  Score=192.07  Aligned_cols=146  Identities=27%  Similarity=0.433  Sum_probs=124.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-C--CcEEEEEEecccc--cccHHHHHHHHHHHhcC-CCCCccceEEEEEeC----Ce
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-D--GQEIAVKRLSKAS--GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG----EE  551 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~--g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~----~~  551 (649)
                      +|++.+.||+|+||.||++... .  +..+|||++....  ....+.+.+|+.++.++ +|+||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4777899999999999999976 3  7789999986432  22356788999999999 599999999986543    35


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++++||+. ++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||++++++.+||+|||+++
T Consensus        81 ~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            688899885 689888843   456899999999999999999999987   9999999999999999999999999998


Q ss_pred             eeC
Q 006347          632 IFG  634 (649)
Q Consensus       632 ~~~  634 (649)
                      .+.
T Consensus       154 ~~~  156 (332)
T cd07857         154 GFS  156 (332)
T ss_pred             ecc
Confidence            764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.2e-20  Score=194.08  Aligned_cols=151  Identities=26%  Similarity=0.378  Sum_probs=132.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      -|.+.+.||+|.|+.|-.+++- +|+.||||++++..  ......+.+|++-|+.++|||||+||.+.-.+...|||+|.
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            3666689999999999988754 79999999998643  33456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEEEecCCceeeCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~~~~~  637 (649)
                      =.+|+|.+||.+  ..+.+.+....+++.||..|+.|+|+-+   +|||||||+|+.+- .-|-+|+.|||++-.+.+.+
T Consensus        99 GD~GDl~DyImK--He~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~  173 (864)
T KOG4717|consen   99 GDGGDLFDYIMK--HEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK  173 (864)
T ss_pred             cCCchHHHHHHh--hhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc
Confidence            999999999975  3456899999999999999999999877   99999999998875 56789999999998876544

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.82  E-value=2.3e-19  Score=184.08  Aligned_cols=149  Identities=27%  Similarity=0.367  Sum_probs=122.1

Q ss_pred             HHHHhcCcccceee--ccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          476 LATATNNFQLSSKL--GQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       476 l~~~~~~f~~~~~L--G~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .....++|++.+.+  |+|+||.||++... ++..+|+|.+.......   .  |+.....+ +|+|++++++.+...+.
T Consensus         9 ~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390          9 LVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            34444566666665  99999999999875 67889999886432111   1  22222222 79999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCc
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMA  630 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla  630 (649)
                      .++||||+++++|.+++..   ...+++.++..++.|+++||.|||+.+   ++||||||+||+++.++ .+||+|||++
T Consensus        84 ~~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            9999999999999999954   237899999999999999999999987   99999999999999998 9999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       158 ~~~~~  162 (267)
T PHA03390        158 KIIGT  162 (267)
T ss_pred             eecCC
Confidence            87654

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.82  E-value=8e-20  Score=185.20  Aligned_cols=152  Identities=30%  Similarity=0.502  Sum_probs=133.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|++.++||+|+||.||+++.. +++.+|+|.+....  .....++.+|+.++++++|+||+++++++.+....++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4778899999999999999865 68899999986532  23456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++|.+++.+.. ....+++..+..++.++++||+|||+.+   ++|+||+|+||++++++.+|++|||+++.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            99999999985422 2356899999999999999999999987   999999999999999999999999999887543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.82  E-value=1e-19  Score=192.92  Aligned_cols=147  Identities=27%  Similarity=0.422  Sum_probs=126.6

Q ss_pred             cCcc-cceeeccCCcEEEEEEEec-CCcEEEEEEeccccccc--------------HHHHHHHHHHHhcCCCCCccceEE
Q 006347          481 NNFQ-LSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQG--------------LEEFMNEVMVISKLQHRNLVRLLG  544 (649)
Q Consensus       481 ~~f~-~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~--------------~~~f~~E~~~l~~l~H~niv~l~g  544 (649)
                      ++|. +.+.||+|+||+||+|... +++.||||.+.......              ...+.+|+.++.+++|+||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            3454 3467999999999999976 68999999886432211              125789999999999999999999


Q ss_pred             EEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       545 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      ++...+..++||||++ ++|.+++..   ...+++.....++.|+++||.|||+.+   |+|+||||+||+++.++.+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence            9999999999999996 689988843   345889999999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeC
Q 006347          625 SDFGMAKIFG  634 (649)
Q Consensus       625 ~DFGla~~~~  634 (649)
                      +|||+++.+.
T Consensus       161 ~dfg~~~~~~  170 (335)
T PTZ00024        161 ADFGLARRYG  170 (335)
T ss_pred             CCccceeecc
Confidence            9999998775

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.82  E-value=1.3e-19  Score=188.72  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=126.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-CcEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||+|.... ++.||||.++... .....++..|+.++.+.+ |+||+++++++.++...++|||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            557778999999999999999874 8899999986532 234466777888777775 9999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++ ++|.+++..  ....+++..+..++.++++||+|||+..  +|+||||+|+||++++++.+||+|||+++.+.
T Consensus        95 ~~~-~~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          95 LMS-TCLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             ccC-cCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            985 477777643  2347899999999999999999999742  39999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.82  E-value=1.1e-19  Score=187.38  Aligned_cols=148  Identities=33%  Similarity=0.497  Sum_probs=128.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      |++.+.||+|+||.||+|+.. +++.||||++..... .......+|+..+.+++ |+|++++++++.+++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456789999999999999986 578999999865322 23334567999999998 999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                       +++|.+++... ....+++..+..++.|++.+|.|||+.+   ++|+||+|+||++++++.+||+|||+++....
T Consensus        81 -~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          81 -EGNLYQLMKDR-KGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             -CCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence             88998888542 2346899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.82  E-value=2.9e-19  Score=187.72  Aligned_cols=145  Identities=34%  Similarity=0.535  Sum_probs=125.8

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |...++||+|+||+||+|+.. +++.||+|.+.....   ...+.+.+|++++++++|+|++++++++.+++..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            445578999999999999875 688999999864322   2345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++ ++|.+++..  ....+++.++..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++...
T Consensus       103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            96 577777743  2356899999999999999999999987   999999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.5e-19  Score=199.11  Aligned_cols=170  Identities=29%  Similarity=0.477  Sum_probs=144.0

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEe--
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE--  548 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~--  548 (649)
                      ++.+...+..|.+.+.||.|.+|.|||++.. +++.+|||++... ....++...|..+++.. +|||++.++|++.-  
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            3444455677888999999999999999865 6888999987653 45567788899999888 79999999999874  


Q ss_pred             ---CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          549 ---GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       549 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                         ++.+|||||||.+||..++++.-. ...+.|..+..|+..+++|+.+||...   +||||||-.||||++++.+|+.
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEe
Confidence               568999999999999999997643 677999999999999999999999987   9999999999999999999999


Q ss_pred             ecCCceeeCCCCCccccCceeecC
Q 006347          626 DFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       626 DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      |||++..++..-.+.  ++.+|||
T Consensus       166 DFGvSaQldsT~grR--nT~iGtP  187 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGRR--NTFIGTP  187 (953)
T ss_pred             eeeeeeeeecccccc--cCcCCCc
Confidence            999999885544433  3467775

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.82  E-value=1.4e-19  Score=191.63  Aligned_cols=150  Identities=31%  Similarity=0.480  Sum_probs=129.8

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEK  552 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~  552 (649)
                      ...+++|+..+.||+|+||.||++... +++.||||++.+.  .....+.+..|+.++.+++||||+++++++.. ....
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            446788999999999999999999865 7899999988542  22345778899999999999999999999876 5578


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++|+||+ +++|.+++.    ...+++.....++.|+++||+|||+.+   |+||||+|+||++++++.+||+|||+++.
T Consensus        86 ~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          86 YFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             EEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence            9999998 568988874    345788888899999999999999987   99999999999999999999999999986


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      ..
T Consensus       158 ~~  159 (328)
T cd07856         158 QD  159 (328)
T ss_pred             cC
Confidence            53

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.9e-19  Score=191.57  Aligned_cols=145  Identities=28%  Similarity=0.473  Sum_probs=124.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------e
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------E  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~  551 (649)
                      ++|...+.||+|+||.||+|+.. +++.||||++.+..  ......+.+|+.++++++|+||+++++++....      +
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            67888899999999999999865 68999999986532  223456889999999999999999999987543      4


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++|+||+.. +|..++     ...+++..+..++.|+++||+|||+.+   |+||||||+||+++.++.+||+|||+++
T Consensus        95 ~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879          95 FYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             EEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            6899999964 776665     235789999999999999999999987   9999999999999999999999999998


Q ss_pred             eeC
Q 006347          632 IFG  634 (649)
Q Consensus       632 ~~~  634 (649)
                      ...
T Consensus       166 ~~~  168 (342)
T cd07879         166 HAD  168 (342)
T ss_pred             CCC
Confidence            753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.81  E-value=1.4e-19  Score=189.86  Aligned_cols=144  Identities=22%  Similarity=0.241  Sum_probs=124.2

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.+.+|.|+++.||+++. +++.||||++...  .....+.+..|+.++++++|+||+++++++.+.+..+++|||++++
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            345566667777777666 5899999998654  3445678999999999999999999999999999999999999999


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +|.+++... ....+++.....++.|+++||+|||+.+   |+||||||+||+++.++.+||+|||.+..+
T Consensus        85 ~l~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216          85 SCEDLLKTH-FPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             CHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceee
Confidence            999998653 2345788889999999999999999987   999999999999999999999999998765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.81  E-value=9.9e-20  Score=192.50  Aligned_cols=148  Identities=29%  Similarity=0.478  Sum_probs=130.9

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EKM  553 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~  553 (649)
                      +|.+.+.||+|+||.||+++.. +++.+|||++....  ....+.+.+|+.+++.++|+||+++++++.+.+     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999976 58999999987543  345578999999999999999999999998875     789


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||++ ++|.+++..   ...+++..+..++.++++||+|||+.+   |+|+||||+|||+++++.+||+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999997 589888853   337899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       154 ~~~  156 (330)
T cd07834         154 DPD  156 (330)
T ss_pred             ccc
Confidence            544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.81  E-value=3.1e-19  Score=185.80  Aligned_cols=147  Identities=20%  Similarity=0.320  Sum_probs=111.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccccccH-----------HHHHHHHHHHhcCCCCCccceEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGL-----------EEFMNEVMVISKLQHRNLVRLLGC  545 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~~~~~-----------~~f~~E~~~l~~l~H~niv~l~g~  545 (649)
                      ++|.+.+.||+|+||.||+|...+    +..+|+|..........           .....+...+..+.|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            578899999999999999999764    34566665432221111           112233345567789999999998


Q ss_pred             EEeCC----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          546 CVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       546 ~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      +....    ..++++|++. .++.+.+..   ....++..+..|+.|+++||+|||+.+   |+||||||+|||++.++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~  164 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR  164 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence            76554    3478888774 466666532   223567888999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeC
Q 006347          622 PKISDFGMAKIFG  634 (649)
Q Consensus       622 ~Ki~DFGla~~~~  634 (649)
                      +||+|||+|+.+.
T Consensus       165 ~~l~DFGla~~~~  177 (294)
T PHA02882        165 GYIIDYGIASHFI  177 (294)
T ss_pred             EEEEEcCCceeec
Confidence            9999999999874

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.81  E-value=1.5e-19  Score=186.22  Aligned_cols=148  Identities=30%  Similarity=0.509  Sum_probs=130.0

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      |+..+.||+|++|.||++... +++.+++|++.....  .....+..|+.++++++|+||+++++++.+++..++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456689999999999999876 688999999865432  24567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++ +|.+++...  ...+++..+..++.+++.||.|||+.+   |+|+||||+||++++++.+||+|||.+..+...
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            75 888887542  256899999999999999999999987   999999999999999999999999999887544

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=8.2e-21  Score=216.08  Aligned_cols=162  Identities=32%  Similarity=0.420  Sum_probs=135.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++.-..+||.|.||.||-+... +|+..|||-+...  .....+...+|..++..|+|||+|+.+|+-.+++..+|.|||
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence            4555679999999999999855 7889999977532  234567788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      |++|+|.+.+..   ....++.....+-.|++.|++|||+++   ||||||||.||+|+.++.+|+.|||.|+.+.+...
T Consensus      1316 C~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1316 CEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             hccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence            999999999842   334566666677899999999999998   99999999999999999999999999999865521


Q ss_pred             --ccccCceeecC
Q 006347          639 --QADTGRVVGTL  649 (649)
Q Consensus       639 --~~~~~~~~GT~  649 (649)
                        .......+||+
T Consensus      1390 ~~~~el~~~~GT~ 1402 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTP 1402 (1509)
T ss_pred             cCCHHHHhhcCCc
Confidence              12234567774

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.81  E-value=1.1e-19  Score=188.06  Aligned_cols=150  Identities=27%  Similarity=0.372  Sum_probs=124.3

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +|...++||+|+||.||++... +++.+|||.+.... ......+.+|+.++.++. |+||+++++++.+....+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            3455678999999999999876 68999999986532 234567899999999996 99999999999999999999999


Q ss_pred             CCCCChhhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFD--PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ ++|.++...  ......+++.....++.+++.||+|||+..  +|+||||||+||++++++.+||+|||+++.+.
T Consensus        85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            86 455544321  112356899999999999999999999752  39999999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.81  E-value=2.5e-19  Score=187.83  Aligned_cols=148  Identities=34%  Similarity=0.550  Sum_probs=127.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .|+..+.||+|+||.||+|... +++.+|||.+...   .....+++.+|++++++++|+|++++++++.+....++|||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            3666689999999999999976 6788999988642   22344678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+. |+|.+++..  ....+++.++..++.+++.||.|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        96 ~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          96 YCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             ccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            996 688777643  2345889999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.81  E-value=3.9e-19  Score=183.43  Aligned_cols=148  Identities=30%  Similarity=0.504  Sum_probs=125.2

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcC---CCCCccceEEEEEeCCe-----
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKL---QHRNLVRLLGCCVEGEE-----  551 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~-----  551 (649)
                      |++.+.||+|+||.||+|+.. +++.+|||++.....  .....+.+|+.++.++   .|+|++++++++.+.+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            566789999999999999987 489999999964322  2234567788777665   59999999999998776     


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .+++|||++ ++|.+++... ....+++..+..++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||+++
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKC-PKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence            899999997 5898888542 2235899999999999999999999987   9999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       156 ~~~~  159 (287)
T cd07838         156 IYSF  159 (287)
T ss_pred             eccC
Confidence            8743

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.81  E-value=1.7e-19  Score=190.77  Aligned_cols=141  Identities=27%  Similarity=0.360  Sum_probs=122.8

Q ss_pred             eeeccC--CcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQG--GFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G--~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ++||+|  +||+||++... +++.||||.+....  ....+.+.+|+.+++.++|+||+++++++..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            467766  89999999875 78999999986432  23346788999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      ++|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+|++||+.+.
T Consensus        84 ~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~  149 (328)
T cd08226          84 GSANSLLKTY-FPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLY  149 (328)
T ss_pred             CCHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHh
Confidence            9999998653 2345889999999999999999999887   9999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.81  E-value=6.2e-20  Score=193.50  Aligned_cols=157  Identities=26%  Similarity=0.381  Sum_probs=132.6

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--------cccHHHHHHHHHHHhcCC---CCCccceEEEEEeC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--------GQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEG  549 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--------~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~  549 (649)
                      +|+..+.+|+|+||.|..+.++ +..+|+||.+.+..        ....-..-.|+.+|..++   |+||++++.++.++
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            4788899999999999999987 46789999987642        112234567999999997   99999999999999


Q ss_pred             CeEEEEEecC-CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          550 EEKMLIYEYM-PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       550 ~~~~lV~Ey~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      +..||+||-. ++-+|.+++.   .+..+++.+..-|.+||+.|+++||+++   |||||||-+|+.++.+|-+||+|||
T Consensus       642 d~yyl~te~hg~gIDLFd~IE---~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg  715 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIE---FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG  715 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhh---ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence            9999999976 5667888883   4567899999999999999999999998   9999999999999999999999999


Q ss_pred             CceeeCCCCCccccCceeec
Q 006347          629 MAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       629 la~~~~~~~~~~~~~~~~GT  648 (649)
                      -|.......    ....+||
T Consensus       716 saa~~ksgp----fd~f~gt  731 (772)
T KOG1152|consen  716 SAAYTKSGP----FDVFVGT  731 (772)
T ss_pred             chhhhcCCC----cceeeee
Confidence            998764433    3346666

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=2.2e-19  Score=187.73  Aligned_cols=150  Identities=32%  Similarity=0.531  Sum_probs=127.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  550 (649)
                      .++|++.++||+|+||.||+|+.. +++.+|||++.....  .....+.+|++++.+++|+||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            468999999999999999999976 688999998864322  22356788999999999999999999886544      


Q ss_pred             --eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          551 --EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       551 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                        ..++|+||++. +|...+..  ....+++..+..++.|+++||.|||+.+   |+|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence              35999999964 67777643  2346899999999999999999999987   9999999999999999999999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +++....
T Consensus       161 ~~~~~~~  167 (311)
T cd07866         161 LARPYDG  167 (311)
T ss_pred             cchhccC
Confidence            9987643

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=1.4e-19  Score=205.61  Aligned_cols=158  Identities=30%  Similarity=0.459  Sum_probs=134.5

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec----C----CcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK----D----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCC  546 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~----~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~  546 (649)
                      +...++..+.+.||+|.||.|++|...    .    ...||||+++... ..+.+.+..|+.+|..+ +|+||+.++|+|
T Consensus       292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~  371 (609)
T KOG0200|consen  292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC  371 (609)
T ss_pred             eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence            333444555679999999999999854    1    3579999997543 34678899999999999 699999999999


Q ss_pred             EeCCeEEEEEecCCCCChhhhhcCCC-----------CC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCc
Q 006347          547 VEGEEKMLIYEYMPNRSLDALLFDPL-----------KK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASN  613 (649)
Q Consensus       547 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~N  613 (649)
                      .+++..++|+||++.|+|.+||+...           ..  ..++..+++.++.|||.||+||++..   +|||||.++|
T Consensus       372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRN  448 (609)
T KOG0200|consen  372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARN  448 (609)
T ss_pred             ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhh
Confidence            99999999999999999999997643           01  23889999999999999999999887   9999999999


Q ss_pred             EEEcCCCceEEEecCCceeeCCCC
Q 006347          614 ILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ||+.++..+||+||||||......
T Consensus       449 VLi~~~~~~kIaDFGlar~~~~~~  472 (609)
T KOG0200|consen  449 VLITKNKVIKIADFGLARDHYNKD  472 (609)
T ss_pred             EEecCCCEEEEccccceeccCCCC
Confidence            999999999999999999754433

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.80  E-value=2.2e-19  Score=191.11  Aligned_cols=146  Identities=28%  Similarity=0.471  Sum_probs=126.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC----------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG----------  549 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----------  549 (649)
                      .+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|++++++++|+||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            67888999999999999999875 6889999998765556677899999999999999999999776543          


Q ss_pred             ----CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEE
Q 006347          550 ----EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKI  624 (649)
Q Consensus       550 ----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki  624 (649)
                          ...++||||++ ++|.+++.    ...+++.....++.||+.||.|||+.+   |+||||||+||+++ ++..+||
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl  156 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI  156 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence                35789999997 58888873    235889999999999999999999987   99999999999998 4567999


Q ss_pred             EecCCceeeC
Q 006347          625 SDFGMAKIFG  634 (649)
Q Consensus       625 ~DFGla~~~~  634 (649)
                      +|||+++.+.
T Consensus       157 ~dfg~~~~~~  166 (342)
T cd07854         157 GDFGLARIVD  166 (342)
T ss_pred             CCcccceecC
Confidence            9999998763

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.80  E-value=2.1e-19  Score=185.00  Aligned_cols=147  Identities=32%  Similarity=0.506  Sum_probs=129.8

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      |+..+.||+|++|.||+|+.. +++.+|+|.+....  ....+.+..|+.++++++|+|++++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455678999999999999987 58999999987643  334567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      + ++|.+++...  ...+++..+..++.++++||+|||+.+   |+||||+|+||++++++.+||+|||+++....
T Consensus        81 ~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          81 D-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             C-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            7 5899998542  146899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.80  E-value=1.8e-19  Score=183.47  Aligned_cols=150  Identities=31%  Similarity=0.463  Sum_probs=124.8

Q ss_pred             CcccceeeccCCcEEEEEEEecC-CcEEEEEEeccc-----ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA-----SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      +|.+.++||+|+||.||++.... +..+++|.++..     ......++..|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            46778999999999999998763 444555555431     123345677899999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          556 YEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |||+++++|.+++... .....+++..+..++.|+++||.|||+.+   ++|+||||+||++++ ..+||+|||+++.+.
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999988542 23456899999999999999999999987   999999999999986 469999999998764


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       157 ~  157 (260)
T cd08222         157 G  157 (260)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.80  E-value=4.2e-19  Score=179.34  Aligned_cols=141  Identities=35%  Similarity=0.458  Sum_probs=126.5

Q ss_pred             eccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       489 LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      ||+|+||.||++... +++.+|+|.+.....   .....+..|+.++++++|+||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999976 588999999865432   2456889999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      .+++..   ...+++.....++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||++.....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            999853   346899999999999999999999977   99999999999999999999999999988644

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.6e-21  Score=185.24  Aligned_cols=151  Identities=26%  Similarity=0.435  Sum_probs=128.0

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eEEEEEe
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EKMLIYE  557 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E  557 (649)
                      .+.||-|+||.||.++.+ +|+.||.|++...-  -...+.+.+|+..+.-++|.|++..++...-..     +.|+|+|
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            468999999999999976 79999999886432  234578999999999999999999988765433     5678999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      .| .-+|.+++-   ....++.....-+..||++||.|||+.+   |.||||||.|.|++.+...||+||||||....++
T Consensus       138 Lm-QSDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  138 LM-QSDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HH-Hhhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence            88 457888773   4567888888889999999999999988   9999999999999999999999999999988777


Q ss_pred             CccccC
Q 006347          638 DQADTG  643 (649)
Q Consensus       638 ~~~~~~  643 (649)
                      ...+|.
T Consensus       211 ~~hMTq  216 (449)
T KOG0664|consen  211 RLNMTH  216 (449)
T ss_pred             hhhhHH
Confidence            665554

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.7e-20  Score=188.48  Aligned_cols=155  Identities=28%  Similarity=0.356  Sum_probs=128.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-------cccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~  551 (649)
                      ++|-++..||+|||..|||+..- ..+-||||+-....       +.-.+...+|..+-+.|.||.||+++.++.- .+.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            45777789999999999999854 57789999643211       1122446688899999999999999999875 456


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecC
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFG  628 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFG  628 (649)
                      .+-|+||+++.+|+-||.   ..+.+++.+...|+.||..||.||.+. ++||||=||||.||||.+   .+.+||+|||
T Consensus       543 FCTVLEYceGNDLDFYLK---QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLK---QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ceeeeeecCCCchhHHHH---hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            789999999999999995   356789999999999999999999987 489999999999999965   4679999999


Q ss_pred             CceeeCCCCCc
Q 006347          629 MAKIFGGNQDQ  639 (649)
Q Consensus       629 la~~~~~~~~~  639 (649)
                      |++++.++...
T Consensus       619 LSKIMdddSy~  629 (775)
T KOG1151|consen  619 LSKIMDDDSYN  629 (775)
T ss_pred             hhhhccCCccC
Confidence            99999776544

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=1e-19  Score=193.12  Aligned_cols=155  Identities=25%  Similarity=0.377  Sum_probs=131.3

Q ss_pred             HHHHHHHh---cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEE
Q 006347          473 FEELATAT---NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGC  545 (649)
Q Consensus       473 ~~~l~~~~---~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~  545 (649)
                      |..|+.+.   .-|..++.||-|+||.|..+... +...+|+|.|++.+   +......+.|..||+.-..+=||+|+-.
T Consensus       618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS  697 (1034)
T KOG0608|consen  618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS  697 (1034)
T ss_pred             HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence            44444443   34667789999999999998754 45678999997653   3455667889999999999999999999


Q ss_pred             EEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       546 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      |.+.+.+|+||||+++|++-.+|.   +.+.+.+.....++.++..|+++.|.-+   +|||||||+|||||.+|++||+
T Consensus       698 FQDkdnLYFVMdYIPGGDmMSLLI---rmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLT  771 (1034)
T KOG0608|consen  698 FQDKDNLYFVMDYIPGGDMMSLLI---RMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLT  771 (1034)
T ss_pred             eccCCceEEEEeccCCccHHHHHH---HhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeee
Confidence            999999999999999999999883   4566777777788889999999999877   9999999999999999999999


Q ss_pred             ecCCceee
Q 006347          626 DFGMAKIF  633 (649)
Q Consensus       626 DFGla~~~  633 (649)
                      ||||+.=+
T Consensus       772 DFGLCTGf  779 (1034)
T KOG0608|consen  772 DFGLCTGF  779 (1034)
T ss_pred             eccccccc
Confidence            99998643

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=2.5e-19  Score=190.83  Aligned_cols=148  Identities=30%  Similarity=0.471  Sum_probs=129.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe----
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE----  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----  551 (649)
                      ..++|.+.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++++++|+|++++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4567889999999999999999986 5789999998643  22344677889999999999999999998876655    


Q ss_pred             --EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          552 --KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       552 --~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                        .++|+||+ +++|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence              89999998 6799988843    46899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      ++...
T Consensus       165 ~~~~~  169 (343)
T cd07851         165 ARHTD  169 (343)
T ss_pred             ccccc
Confidence            98764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.79  E-value=9.3e-20  Score=170.15  Aligned_cols=151  Identities=26%  Similarity=0.364  Sum_probs=127.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .....+.||+|++|.|-|-++. +|+.+|+|++... ..+..++.+.|+.+..+. ..|.+|+++|........+|.||.
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~  126 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL  126 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence            3344578999999999888765 7999999999753 345667888999987776 689999999998888899999999


Q ss_pred             CCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      | ..||+.+-.+- .+...+++..+-+||..|.+||.|||++  +.+||||+||+|||++.++++||+|||.+..+.+
T Consensus       127 M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  127 M-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             h-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            9 56888776432 2345678888889999999999999985  5699999999999999999999999999988744

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=5.6e-21  Score=182.97  Aligned_cols=147  Identities=31%  Similarity=0.601  Sum_probs=122.0

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--------Ce
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--------EE  551 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~~  551 (649)
                      |.-..++|+|.||.|||++.. +|+.||+|++-..  .+......++|+.+|..++|+|++.++..|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            444568999999999999876 5778898876322  222335567899999999999999999988642        24


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .+||+++|++ +|..+|.+  ....++..++.+++.++..||.|+|...   |+|||+||.|+||+.++.+||+|||+||
T Consensus        99 ~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccc
Confidence            7899999965 78888854  3356889999999999999999999887   9999999999999999999999999999


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       173 ~fs~  176 (376)
T KOG0669|consen  173 AFST  176 (376)
T ss_pred             ceec
Confidence            8753

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.79  E-value=1.7e-20  Score=181.04  Aligned_cols=147  Identities=30%  Similarity=0.400  Sum_probs=123.2

Q ss_pred             cceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          485 LSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ....||.|+||+|+|-.++ .|+.+|||+++... +.+.++++.|.++..+- +.||||+++|.+...+..||.||.| .
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d  146 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-D  146 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-h
Confidence            3468999999999999876 69999999997543 46778899999977666 6899999999999999999999999 4


Q ss_pred             CChhhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          562 RSLDALLFD--PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       562 gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .||+.+...  ..++..+++.-+-.|..-+.+||.||.++-  .|||||+||+|||||..|.+|++|||.+..+.
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV  219 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence            577665431  123456788888888888999999998753  69999999999999999999999999987653

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.78  E-value=1.3e-18  Score=196.01  Aligned_cols=149  Identities=26%  Similarity=0.355  Sum_probs=106.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-C----CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEE------EE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-D----GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGC------CV  547 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~----g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~------~~  547 (649)
                      ..++|.+.++||+|+||.||+|++. +    +..||||++.....  .+.+..| . +....+.+++.+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE-R-VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH-H-HHhhchhhHHHHHHhhhcccccc
Confidence            4578999999999999999999986 4    68999998854321  1112222 1 122222222222211      24


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPLKK-----------------ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLK  610 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk  610 (649)
                      ++.+.+|||||+++++|.+++......                 .......+..|+.|+++||+|||+.+   |+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence            566889999999999999988542110                 01112345578999999999999987   9999999


Q ss_pred             CCcEEEcC-CCceEEEecCCceeeC
Q 006347          611 ASNILLDE-ELNPKISDFGMAKIFG  634 (649)
Q Consensus       611 p~NILl~~-~~~~Ki~DFGla~~~~  634 (649)
                      |+|||+++ ++.+||+|||+|+.+.
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccc
Confidence            99999996 5799999999998653

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.78  E-value=1.1e-18  Score=175.81  Aligned_cols=132  Identities=23%  Similarity=0.189  Sum_probs=115.5

Q ss_pred             CCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChhhhhcC
Q 006347          492 GGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD  570 (649)
Q Consensus       492 G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  570 (649)
                      |.||.||++... +++.+|+|++....     ++..|...+....|||++++++++.+.+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            889999999976 68899999996542     334555666666799999999999999999999999999999999854


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          571 PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       571 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                         ...+++.....++.|++.||+|||+.+   |+||||||+||++++++.+|++|||+++.+.
T Consensus        79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~  136 (237)
T cd05576          79 ---FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             ---hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence               345899999999999999999999987   9999999999999999999999999887654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=2.6e-18  Score=168.62  Aligned_cols=137  Identities=22%  Similarity=0.270  Sum_probs=106.4

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC-----CCCCccceEEEEEeCC---e-EEEE
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-----QHRNLVRLLGCCVEGE---E-KMLI  555 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~lV  555 (649)
                      ..+.||+|+||.||. ...++.. +||++........+.+.+|+.++..+     .||||++++|++.++.   . ..+|
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            347899999999996 2224444 79988654444667899999999999     5799999999998874   3 3378


Q ss_pred             Eec--CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCceEecCCCCCcEEEcC----CCceEEEecC
Q 006347          556 YEY--MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL-LYLHRDSRLRIIHRDLKASNILLDE----ELNPKISDFG  628 (649)
Q Consensus       556 ~Ey--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlkp~NILl~~----~~~~Ki~DFG  628 (649)
                      +||  +++|+|.+++.+    ..+++.  ..++.+++.++ +|||+++   |+||||||+|||++.    +..++|+||+
T Consensus        84 ~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             ecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            999  668999999943    235544  35677888777 8999998   999999999999974    3479999954


Q ss_pred             Ccee
Q 006347          629 MAKI  632 (649)
Q Consensus       629 la~~  632 (649)
                      .++.
T Consensus       155 G~~~  158 (210)
T PRK10345        155 GEST  158 (210)
T ss_pred             CCcc
Confidence            4443

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.78  E-value=3.8e-18  Score=168.94  Aligned_cols=149  Identities=37%  Similarity=0.556  Sum_probs=132.8

Q ss_pred             cccceeeccCCcEEEEEEEecC-CcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      |++.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4566899999999999999875 889999999765444 67889999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++|.+++....  ..+++.....++.++++++.|||+.+   ++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       81 GGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            999999985421  11789999999999999999999986   999999999999999999999999999987544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=7.2e-19  Score=185.03  Aligned_cols=162  Identities=25%  Similarity=0.372  Sum_probs=136.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEec--ccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~--~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ..|++.++||.||...|||+...+.+.+|+|++.  ..+.+....|.+|+.+|.+|+ |.+||+|+.|-..++..|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            4578889999999999999999988899998774  335667889999999999995 9999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |= .-+|..+|.... .....| .+..+..|++.++.++|+++   |||.||||.|+|+-+ |.+||+|||.|..+..+.
T Consensus       441 ~G-d~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  441 CG-DIDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             cc-cccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence            76 568999996532 223345 66778999999999999998   999999999999986 489999999999987766


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                      ....-...+||+
T Consensus       514 TsI~kdsQvGT~  525 (677)
T KOG0596|consen  514 TSIVKDSQVGTV  525 (677)
T ss_pred             cceeeccccCcc
Confidence            555444567774

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.77  E-value=1.7e-19  Score=176.99  Aligned_cols=147  Identities=27%  Similarity=0.330  Sum_probs=122.5

Q ss_pred             HhcCcccc-eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEe----CCe
Q 006347          479 ATNNFQLS-SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE----GEE  551 (649)
Q Consensus       479 ~~~~f~~~-~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~----~~~  551 (649)
                      .+++|++. ++||-|-.|.|..+..+ +++.+|+|++..     ....++|+++--.. .|+|||+++.++..    ..-
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            34566654 68999999999999876 788999998843     24567888876666 69999999998764    335


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecC
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFG  628 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFG  628 (649)
                      .++|||.|+||.|.+.+.++ ....+++++.-.|+.||+.|+.|||+..   |.||||||+|+|...   +...|++|||
T Consensus       134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence            68999999999999988653 4457999999999999999999999987   999999999999964   5568999999


Q ss_pred             CceeeC
Q 006347          629 MAKIFG  634 (649)
Q Consensus       629 la~~~~  634 (649)
                      +|+.-.
T Consensus       210 FAK~t~  215 (400)
T KOG0604|consen  210 FAKETQ  215 (400)
T ss_pred             cccccC
Confidence            999754

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.77  E-value=3.5e-19  Score=172.60  Aligned_cols=147  Identities=29%  Similarity=0.421  Sum_probs=123.9

Q ss_pred             ccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCC
Q 006347          484 QLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ..+..||.|..|.|+|.+.. .|..+|||.+.+.. ..+.++++..+.++.+-+ .|.||+.+|+++.+...++.||.|.
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            34568999999999999987 68999999997653 345678888888888776 8999999999999999999999983


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                       --++.+|+.  ..+++++.-+-++...+.+||.||.+++  .|||||+||+|||+|+.|++|++|||++..+..
T Consensus       175 -~C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  175 -TCAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD  244 (391)
T ss_pred             -HHHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec
Confidence             345566543  3456888888889999999999999876  699999999999999999999999999988743

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4.1e-19  Score=180.39  Aligned_cols=161  Identities=30%  Similarity=0.370  Sum_probs=133.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .+|..+..||+|+||.|-.+..+ +.+.+|||++++..   ..+.+--+.|-++|+.. +-|.+++|..++..-+.+|.|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            46777899999999999999877 45679999998643   23344456777888877 568999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+.+|+|-.++.   +-..+.+.....+|..||-||-+||+++   ||.||||.+||+||.++++||+|||+++.-.-
T Consensus       429 MEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             EEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc
Confidence            99999999988873   3455777788889999999999999998   99999999999999999999999999996322


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      +  ...|.+..|||
T Consensus       503 ~--~~TTkTFCGTP  514 (683)
T KOG0696|consen  503 D--GVTTKTFCGTP  514 (683)
T ss_pred             C--CcceeeecCCC
Confidence            2  12345578885

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.76  E-value=8.9e-19  Score=192.30  Aligned_cols=158  Identities=31%  Similarity=0.445  Sum_probs=123.2

Q ss_pred             cccceeeccCCcEE-EEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCC
Q 006347          483 FQLSSKLGQGGFGP-VYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       483 f~~~~~LG~G~fG~-Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      |...+.+|.|+-|+ ||+|.+. |++||||++-.   ....-..+|+..++.- .||||||+++.-.+++..||..|.| 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            44456789999875 7999998 89999999843   3344567899999988 6999999999999999999999999 


Q ss_pred             CCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---C--CceEEEecCCceeeC
Q 006347          561 NRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---E--LNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~--~~~Ki~DFGla~~~~  634 (649)
                      .-+|++++... .......-.....+..|+++||++||+-+   ||||||||+||||+.   +  .+++|+|||+++.+.
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            56999999653 11111111344667899999999999866   999999999999976   2  579999999999997


Q ss_pred             CCCCcc-ccCceeec
Q 006347          635 GNQDQA-DTGRVVGT  648 (649)
Q Consensus       635 ~~~~~~-~~~~~~GT  648 (649)
                      .+++.. ......||
T Consensus       663 ~~~sS~~r~s~~sGt  677 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGT  677 (903)
T ss_pred             CCcchhhcccCCCCc
Confidence            766543 22334454

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.75  E-value=3.3e-17  Score=159.28  Aligned_cols=143  Identities=40%  Similarity=0.677  Sum_probs=127.1

Q ss_pred             eccCCcEEEEEEEecC-CcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChhh
Q 006347          489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA  566 (649)
Q Consensus       489 LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~  566 (649)
                      ||+|.+|.||++...+ ++++++|++...... ..+.+.+|+..+.+++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999874 899999998654322 35789999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCCC
Q 006347          567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       567 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~~  636 (649)
                      ++...  ...+++..+..++.++++++.|||+.+   ++|+||+|.||+++. +..++|+|||.+......
T Consensus        81 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          81 LLKEN--EGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            98542  146889999999999999999999987   999999999999999 899999999999977543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.74  E-value=2.5e-17  Score=164.44  Aligned_cols=137  Identities=36%  Similarity=0.537  Sum_probs=124.0

Q ss_pred             CcEEEEEEEec-CCcEEEEEEeccccccc-HHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChhhhhcC
Q 006347          493 GFGPVYWGRLK-DGQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD  570 (649)
Q Consensus       493 ~fG~Vykg~~~-~g~~vAVK~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  570 (649)
                      +||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999987 48999999997655444 78999999999999999999999999999999999999999999999854


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          571 PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       571 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      .   ..+++..+..++.++++++.|||+.+   ++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~  139 (244)
T smart00220       81 R---GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDP  139 (244)
T ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence            2   23889999999999999999999987   99999999999999999999999999998754

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=2.8e-17  Score=162.40  Aligned_cols=135  Identities=22%  Similarity=0.308  Sum_probs=114.6

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccc--------cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--------GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.||+|++|.||+|.. .+..++||+.......        ....+.+|+.++..++|++++....++.+.+..++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 5778999976432211        124678899999999999998888888888889999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++++|.+++...      .+ .+..++.+++.+|.+||+.+   ++|+|++|+|||++ ++.++|+|||+++..
T Consensus        81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879         81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            9999999998431      22 78899999999999999987   99999999999999 788999999999864

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.73  E-value=2.4e-17  Score=161.46  Aligned_cols=147  Identities=18%  Similarity=0.200  Sum_probs=113.3

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccc----------------------cHHHHHHHHHHHh
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ----------------------GLEEFMNEVMVIS  532 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~----------------------~~~~f~~E~~~l~  532 (649)
                      ++......|.+.+.||+|+||.||++...+|+.||||++......                      ....+..|..++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            333333447777899999999999999888999999987542200                      1123667888999


Q ss_pred             cCCCC--CccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006347          533 KLQHR--NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLK  610 (649)
Q Consensus       533 ~l~H~--niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk  610 (649)
                      ++.|+  .+++.++    ....++||||+++++|.+....         .....++.++++++.++|+.+   |+|||||
T Consensus        89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~  152 (198)
T cd05144          89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLS  152 (198)
T ss_pred             HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCC
Confidence            99877  4455544    2456899999999999765420         234568899999999999977   9999999


Q ss_pred             CCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          611 ASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       611 p~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+||++++++.+||+|||+|+....+.
T Consensus       153 p~Nill~~~~~~~liDfg~~~~~~~~~  179 (198)
T cd05144         153 EFNILVDDDEKIYIIDWPQMVSTDHPN  179 (198)
T ss_pred             cccEEEcCCCcEEEEECCccccCCCcc
Confidence            999999999999999999998775543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=99.73  E-value=2.6e-17  Score=165.27  Aligned_cols=146  Identities=18%  Similarity=0.197  Sum_probs=113.0

Q ss_pred             CcccceeeccCCcEEEEEEE--ecCCcEEEEEEecccccc------------------------cHHHHHHHHHHHhcCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGR--LKDGQEIAVKRLSKASGQ------------------------GLEEFMNEVMVISKLQ  535 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~--~~~g~~vAVK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  535 (649)
                      .|++.+.||+|+||.||+|.  ..+|+.||||.++.....                        ....+..|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998  568999999988643210                        0123568999999997


Q ss_pred             CC--CccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCc
Q 006347          536 HR--NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASN  613 (649)
Q Consensus       536 H~--niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~N  613 (649)
                      |.  .+.+++++    ...+|||||+++.+|.....   ....+...+...++.|++.+|.+||+.+  .|+||||||+|
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~N  179 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYN  179 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhh
Confidence            53  34444443    23589999999988876542   2234556667889999999999999875  39999999999


Q ss_pred             EEEcCCCceEEEecCCceeeCCCC
Q 006347          614 ILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+++ ++.+||+|||+|+..+...
T Consensus       180 Ili~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      180 ILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             EEEE-CCCEEEEEChhhhccCCcc
Confidence            9999 8899999999999765543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.73  E-value=3.6e-17  Score=184.20  Aligned_cols=142  Identities=20%  Similarity=0.271  Sum_probs=115.3

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecCCcEEEEEE-ecccc-------cccHHHHHHHHHHHhcCCCCCccceEEEEEeC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKR-LSKAS-------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG  549 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~-l~~~~-------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  549 (649)
                      .....|...+.||+|+||.||+|.+.+.. +++|+ +.+..       ....+++.+|++++.+++|++++....++.+.
T Consensus       330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~  408 (535)
T PRK09605        330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP  408 (535)
T ss_pred             ccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence            33445566789999999999999887443 44443 22211       11235688999999999999999988888888


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ...++||||+++++|.+++.           ....++.+++++|.|||+.+   ++||||||+|||+ +++.++|+|||+
T Consensus       409 ~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGl  473 (535)
T PRK09605        409 EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGL  473 (535)
T ss_pred             CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcc
Confidence            88899999999999998873           35678999999999999987   9999999999999 678999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      |+....
T Consensus       474 a~~~~~  479 (535)
T PRK09605        474 GKYSDL  479 (535)
T ss_pred             cccCCc
Confidence            998543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=5.8e-19  Score=183.60  Aligned_cols=158  Identities=28%  Similarity=0.376  Sum_probs=135.4

Q ss_pred             cccceeeccCCcEEEEEEEecCCc-EEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~g~-~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++....||-|+||.|-.+..+... .+|+|.+++.   ...+.+....|-.+|...+.+.||+||..+.+....|+.||-
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            344568999999999999877433 4788887654   334567788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      |-+|.|...|++   ++.++..+...++..+.+|++|||.++   ||.|||||+|.+||.+|-+||.|||+|+.++....
T Consensus       502 ClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  502 CLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             hcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            999999999965   356777888889999999999999998   99999999999999999999999999999965542


Q ss_pred             ccccCceeecC
Q 006347          639 QADTGRVVGTL  649 (649)
Q Consensus       639 ~~~~~~~~GT~  649 (649)
                         |-+..|||
T Consensus       576 ---TwTFcGTp  583 (732)
T KOG0614|consen  576 ---TWTFCGTP  583 (732)
T ss_pred             ---eeeecCCc
Confidence               45578885

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.72  E-value=1.3e-18  Score=186.44  Aligned_cols=162  Identities=27%  Similarity=0.456  Sum_probs=141.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ..+|...+.+|.|.+|.|||++.. .++..|||.++-.......-...|+-+++..+|+|||.++|-+.-.+..+++|||
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            456888899999999999999976 7889999999877667778888999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      +.+|+|++.-+-   ..++++.+.-..++...+||+|||..+   -+|||||-.|||+.+.+.+|++|||.+..++..-.
T Consensus        94 cgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati~  167 (829)
T KOG0576|consen   94 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATIA  167 (829)
T ss_pred             cCCCcccceeee---cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhhh
Confidence            999999988753   467888888888999999999999988   89999999999999999999999999988754333


Q ss_pred             ccccCceeecC
Q 006347          639 QADTGRVVGTL  649 (649)
Q Consensus       639 ~~~~~~~~GT~  649 (649)
                      +.  ....|||
T Consensus       168 Kr--ksfiGtp  176 (829)
T KOG0576|consen  168 KR--KSFIGTP  176 (829)
T ss_pred             hh--hcccCCc
Confidence            22  3366664

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=7.3e-17  Score=155.88  Aligned_cols=132  Identities=23%  Similarity=0.245  Sum_probs=106.5

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEeccccccc----HHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecC
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG----LEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~----~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +...|++|+||+||.+.- ++..++.+.+.......    ...|.+|+++|.+++ |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            457899999999997766 57888888776543211    225889999999995 5889999886    4579999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC-CCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDL-KASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++.+|...+.    .      ....++.+++++|.++|+.+   |+|||| ||+|||+++++.++|+|||+|....
T Consensus        81 ~G~~L~~~~~----~------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         81 AGAAMYQRPP----R------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             cCccHHhhhh----h------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            9999865431    1      11347789999999999998   999999 7999999999999999999999654

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=8.8e-18  Score=166.67  Aligned_cols=162  Identities=29%  Similarity=0.383  Sum_probs=134.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|.+...||+|+++.|..+.+. +.+.+|+|++++.   ...+..-...|-.+...- +||.+|.|..++......++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            357888999999999999999876 5778999998764   233455566777777766 79999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |.||.++|+|--++   .+...+++.....+...|+-||.|||+.+   ||.||||.+|+|||.++++|++|+|+++.--
T Consensus       329 vieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             EEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence            99999999996555   34556888888888999999999999998   9999999999999999999999999999753


Q ss_pred             CCCCccccCceeecC
Q 006347          635 GNQDQADTGRVVGTL  649 (649)
Q Consensus       635 ~~~~~~~~~~~~GT~  649 (649)
                      ++..  .|.+..|||
T Consensus       403 ~~gd--~tstfcgtp  415 (593)
T KOG0695|consen  403 GPGD--TTSTFCGTP  415 (593)
T ss_pred             CCCc--ccccccCCC
Confidence            3332  244578885

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.72  E-value=2.6e-17  Score=157.18  Aligned_cols=149  Identities=25%  Similarity=0.409  Sum_probs=126.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEe-cCCcEEEEEEecccccccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||.|+||.+|.|.. .+|++||||.-+...  .-.++..|..+...++| ..|.++.-+..+...-.+|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            36799999999999999999985 479999999764332  33567789999999975 788899999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGla~~~~  634 (649)
                      .+ +.||.+.+.-  -...++..+.+-+|.|+..-++|+|.++   .|||||||+|+|+.-+   ..+.++|||||+.+-
T Consensus        92 LL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   92 LL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             cc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence            88 8999988732  3456889999999999999999999998   9999999999999754   458899999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      +.
T Consensus       166 d~  167 (341)
T KOG1163|consen  166 DI  167 (341)
T ss_pred             cc
Confidence            43

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.72  E-value=5.4e-17  Score=160.01  Aligned_cols=141  Identities=12%  Similarity=0.129  Sum_probs=115.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHH---------HHHHHHHHhcCCCCCccceEEEEEe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE---------FMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~---------f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ...++|+..+.||.|+||.||.... ++..+|||.+........+.         +.+|+..+.+++|++|..+..+...
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3457899999999999999999665 57789999996543322222         6789999999999999999988664


Q ss_pred             C--------CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC
Q 006347          549 G--------EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       549 ~--------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~  620 (649)
                      .        ...+|||||++|.+|.++..       ++.    ....+++.+|..||+.+   ++|||+||+||++++++
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g  172 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence            4        35789999999999987741       222    24568999999999988   99999999999999988


Q ss_pred             ceEEEecCCceeeC
Q 006347          621 NPKISDFGMAKIFG  634 (649)
Q Consensus       621 ~~Ki~DFGla~~~~  634 (649)
                       ++|+|||..+...
T Consensus       173 -i~liDfg~~~~~~  185 (232)
T PRK10359        173 -LRIIDLSGKRCTA  185 (232)
T ss_pred             -EEEEECCCccccc
Confidence             9999999988763

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.71  E-value=6.6e-17  Score=158.26  Aligned_cols=132  Identities=23%  Similarity=0.349  Sum_probs=108.9

Q ss_pred             eeccCCcEEEEEEEecCCcEEEEEEeccccc--------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASG--------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .||+|+||.||+|... +..+++|.......        ....++.+|++++..++|+++.....++.+.+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            4899999999999964 78899998643211        12356788999999999887776666677777889999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++++|.+++...   . .      .++.+++++|.+||+.+   ++|+|++|+||+++ ++.++++|||+++...
T Consensus        80 ~g~~l~~~~~~~---~-~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        80 EGKPLKDVIEEG---N-D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CCccHHHHHhhc---H-H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            999999887431   1 0      78999999999999987   99999999999999 8899999999998753

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2e-17  Score=160.47  Aligned_cols=146  Identities=20%  Similarity=0.418  Sum_probs=121.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEE-EEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGC-CVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lV~E  557 (649)
                      +.|.+.+.||+|.||.+-.+.++ ..+.+++|-+.+. ....++|.+|...--.| .|.||+.-+.. +...+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            45788899999999999999987 5778999988653 34568899998765555 69999988765 455667789999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc--CCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD--EELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~--~~~~~Ki~DFGla~~~~  634 (649)
                      |+|.|+|.+-+.    ...+.+....+++.|++.|+.|||++.   +||||||.+|||+-  +..++|++|||+.+..+
T Consensus       103 ~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  103 FAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             cCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence            999999987773    345778888899999999999999998   99999999999983  34589999999998764

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.70  E-value=9e-18  Score=159.04  Aligned_cols=145  Identities=24%  Similarity=0.466  Sum_probs=124.4

Q ss_pred             cCcccceeeccCCcEEEEEEEe-cCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCe--EEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEE--KMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~--~~lV~  556 (649)
                      ++|++.+++|+|.++.||.|.. .+.+.++||.++..   ..+.+.+|+.+|..|. ||||++|+....++..  ..||+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            5788889999999999999974 46788999999643   4578899999999996 9999999999987664  46999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~~~~~  635 (649)
                      ||..+.+...+.      +.++-.++...+.++++||.|+|+.+   |.|||+||.|+++|.. -..+|+|.|||..+-.
T Consensus       115 E~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  115 EYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             hhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            999998876554      44677778889999999999999988   9999999999999965 5699999999998855


Q ss_pred             CC
Q 006347          636 NQ  637 (649)
Q Consensus       636 ~~  637 (649)
                      .+
T Consensus       186 ~~  187 (338)
T KOG0668|consen  186 GK  187 (338)
T ss_pred             Cc
Confidence            44

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.70  E-value=8e-17  Score=160.37  Aligned_cols=151  Identities=23%  Similarity=0.409  Sum_probs=128.3

Q ss_pred             cCcccceeeccCCcEEEEEEE-ecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~-~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      -+|++.++||+|.||.++.|+ +-+++.||||.-..  .....+++.|.+..+.|. -++|...+-|-.++-+..||+|.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            468899999999999999998 44799999996533  345567888888888884 69999999999999999999998


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-----CceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-----LNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-----~~~Ki~DFGla~~~  633 (649)
                      + +.||++++.  .-...++..++..+|.|++.-++|+|++.   +|.|||||+|+||...     ..+.|+|||||+.+
T Consensus       106 L-GPSLEDLFD--~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  106 L-GPSLEDLFD--LCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY  179 (449)
T ss_pred             h-CcCHHHHHH--HhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence            8 899998863  24566899999999999999999999998   9999999999999743     45899999999998


Q ss_pred             CCCCCc
Q 006347          634 GGNQDQ  639 (649)
Q Consensus       634 ~~~~~~  639 (649)
                      .+..++
T Consensus       180 rDp~Tk  185 (449)
T KOG1165|consen  180 RDPKTK  185 (449)
T ss_pred             cCcccc
Confidence            655443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.67  E-value=6.6e-17  Score=174.01  Aligned_cols=146  Identities=25%  Similarity=0.397  Sum_probs=122.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +..|.....+|.|+|+.|-++... +++..+||++.+..    .+-.+|+.++.+. +|+|++++.+.+.++.+.++|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            445667778999999999999865 68889999997642    2334577666666 79999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE-cCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL-DEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl-~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++.++-|.+.++.   .+... .++..|+.+|+.|+.|||+++   +|||||||+|||+ ++.++++|+|||.++...++
T Consensus       397 ~l~g~ell~ri~~---~~~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  397 LLDGGELLRRIRS---KPEFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             hccccHHHHHHHh---cchhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            9999988777643   22233 777789999999999999988   9999999999999 58999999999999988655

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.67  E-value=1.7e-16  Score=160.84  Aligned_cols=158  Identities=25%  Similarity=0.433  Sum_probs=134.5

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEE
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGC  545 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~  545 (649)
                      ..++.....+++....+.+|.||+||+|.+.      +.++|-||.++.. ++-+...++.|..++..+.|||+..+.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            3455555567777888999999999999654      4566788888653 34466789999999999999999999999


Q ss_pred             EEeCC-eEEEEEecCCCCChhhhhc-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC
Q 006347          546 CVEGE-EKMLIYEYMPNRSLDALLF-----DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE  619 (649)
Q Consensus       546 ~~~~~-~~~lV~Ey~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~  619 (649)
                      +++.. ..+++|.++.-|+|..||.     +....+.++-.+...++.|++.|++|||.++   |||.||.++|.+||+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence            98754 5789999999999999997     4444566888889999999999999999988   9999999999999999


Q ss_pred             CceEEEecCCceee
Q 006347          620 LNPKISDFGMAKIF  633 (649)
Q Consensus       620 ~~~Ki~DFGla~~~  633 (649)
                      .++||+|=.|+|-+
T Consensus       433 LqVkltDsaLSRDL  446 (563)
T KOG1024|consen  433 LQVKLTDSALSRDL  446 (563)
T ss_pred             eeEEeccchhcccc
Confidence            99999999999975

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.66  E-value=5.1e-16  Score=163.80  Aligned_cols=145  Identities=27%  Similarity=0.401  Sum_probs=122.2

Q ss_pred             CcccceeeccCCcEEEEEEEecCC--cEEEEEEecccccccHHHHHHHHHHHhcCCC----CCccceEEEE-EeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDG--QEIAVKRLSKASGQGLEEFMNEVMVISKLQH----RNLVRLLGCC-VEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g--~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l  554 (649)
                      +|++.++||+|+||.||++.....  ..+|+|............+..|+.++..+.+    +++.+++... ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999999997643  4788887755433333378889999998863    5888888888 47778899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-----CceEEEecCC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-----LNPKISDFGM  629 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-----~~~Ki~DFGl  629 (649)
                      ||+.+ +.+|.++..... .+.++..+.++|+.|++.+|.+||+.+   ++||||||+|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99987 899999875543 567999999999999999999999988   9999999999999854     4699999999


Q ss_pred             ce
Q 006347          630 AK  631 (649)
Q Consensus       630 a~  631 (649)
                      |+
T Consensus       174 ar  175 (322)
T KOG1164|consen  174 AR  175 (322)
T ss_pred             Cc
Confidence            99

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.66  E-value=2.8e-16  Score=159.45  Aligned_cols=153  Identities=21%  Similarity=0.257  Sum_probs=127.5

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-C-C----CccceEEEEEeCCe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H-R----NLVRLLGCCVEGEE  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H-~----niv~l~g~~~~~~~  551 (649)
                      .+++|.+...+|+|.||.|.++... .+..||||+++.. ..-.+.-+.|++++.+|. + |    -+|++.+++...++
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3678999999999999999999876 4689999988643 445567788999999994 3 2    26788888889999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-------------  618 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-------------  618 (649)
                      .+||+|.| +.|+.++|..+ ...+++...+..|+.|++++++|||+..   ++|-||||+|||+.+             
T Consensus       166 iCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             eEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence            99999988 77999999653 4567888999999999999999999987   999999999999842             


Q ss_pred             -------CCceEEEecCCceeeCCCC
Q 006347          619 -------ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       619 -------~~~~Ki~DFGla~~~~~~~  637 (649)
                             ...+||+|||-|+.-....
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~h  266 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHH  266 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCc
Confidence                   2347999999999865444

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.65  E-value=2.3e-16  Score=162.19  Aligned_cols=146  Identities=23%  Similarity=0.477  Sum_probs=127.7

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      ....+.|...++||+|.|++||++++..    .+.||+|.+...  +......+|++.|..+ -|.||+++.+++..++.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            3445678889999999999999998653    578999998654  3456789999999999 59999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCc
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMA  630 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla  630 (649)
                      ..+|+||+++-...++++.      ++..+...++..+.+||.++|..+   ||||||||+|+|.+. -+.-.|.|||||
T Consensus       110 v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA  180 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLA  180 (418)
T ss_pred             eEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhH
Confidence            9999999999999999843      678888889999999999999998   999999999999985 467899999999


Q ss_pred             eee
Q 006347          631 KIF  633 (649)
Q Consensus       631 ~~~  633 (649)
                      ...
T Consensus       181 ~~~  183 (418)
T KOG1167|consen  181 QRY  183 (418)
T ss_pred             HHH
Confidence            854

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.65  E-value=1.5e-15  Score=140.41  Aligned_cols=136  Identities=23%  Similarity=0.223  Sum_probs=116.6

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCC--CCccceEEEEEeCCeEEEEEecCCCC
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH--RNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      +.+.||+|.++.||++...+ ..++||.......  ...+..|+.++..++|  .++++++++...++..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            34789999999999999874 7899998865432  5689999999999976  58999999988888899999999887


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      .+..+          +......++.+++++|++||.....+++|+|++|+||++++.+.++++|||+++..
T Consensus        79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            77433          55677788999999999999875567999999999999999999999999999864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.64  E-value=1.3e-15  Score=147.48  Aligned_cols=140  Identities=21%  Similarity=0.261  Sum_probs=100.3

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccc--cHHHH----------------------HHHHHHHhcCCCC--Cc
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--GLEEF----------------------MNEVMVISKLQHR--NL  539 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--~~~~f----------------------~~E~~~l~~l~H~--ni  539 (649)
                      .+.||+|+||+||++...++++||||++......  ....+                      ..|...+.++.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999888999999988643211  11111                      3455666666433  34


Q ss_pred             cceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcC
Q 006347          540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       540 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~  618 (649)
                      .+.+++    ...++||||++++.+.......   .... .+...++.+++.++.++|. .+   |+|+||||+||+++ 
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence            455543    3468999999995543221110   0011 5567889999999999998 66   99999999999999 


Q ss_pred             CCceEEEecCCceeeCCCC
Q 006347          619 ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++.++|+|||+|+....+.
T Consensus       150 ~~~~~liDfg~a~~~~~~~  168 (187)
T cd05119         150 DGKVYIIDVPQAVEIDHPN  168 (187)
T ss_pred             CCcEEEEECcccccccCcc
Confidence            8999999999998775543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.60  E-value=1.1e-15  Score=159.78  Aligned_cols=155  Identities=23%  Similarity=0.311  Sum_probs=133.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC------CCCccceEEEEEeCCe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ------HRNLVRLLGCCVEGEE  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~  551 (649)
                      ....|.+....|+|-|++|.+|... .|++||||+|... +...+.=+.|+++|.+|+      .-+.++|+..|...++
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            3467877788999999999999876 5789999999653 444566678999999996      3578999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCc
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA  630 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla  630 (649)
                      ++||+|-+ .-+|.+.|.....+-.|....+..++.|+.-||..|...+   |+|.||||.|||+++. ...||||||-|
T Consensus       509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA  584 (752)
T KOG0670|consen  509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSA  584 (752)
T ss_pred             eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccc
Confidence            99999988 5689999988777778888999999999999999999877   9999999999999976 45899999999


Q ss_pred             eeeCCCCC
Q 006347          631 KIFGGNQD  638 (649)
Q Consensus       631 ~~~~~~~~  638 (649)
                      ...+.++.
T Consensus       585 ~~~~enei  592 (752)
T KOG0670|consen  585 SFASENEI  592 (752)
T ss_pred             cccccccc
Confidence            98766553

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.59  E-value=8.4e-16  Score=152.69  Aligned_cols=144  Identities=28%  Similarity=0.412  Sum_probs=116.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------e
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------E  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~  551 (649)
                      .+|.....+|.|.- .|.-+... .+++||+|++...  .....+...+|..++..++|+|+++++.++.-+.      +
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            34555567777776 55555443 5889999987543  2345677889999999999999999999987544      5


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .|+||||| ..+|...+.     -.++-.+...|..|++.|+.|||+.+   |+||||||+||++..+..+||.|||+|+
T Consensus        96 ~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   96 VYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             HHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence            68999999 568877774     23677788899999999999999988   9999999999999999999999999999


Q ss_pred             eeC
Q 006347          632 IFG  634 (649)
Q Consensus       632 ~~~  634 (649)
                      .-+
T Consensus       167 ~e~  169 (369)
T KOG0665|consen  167 TED  169 (369)
T ss_pred             ccC
Confidence            643

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=4.6e-15  Score=154.51  Aligned_cols=134  Identities=25%  Similarity=0.409  Sum_probs=112.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-----C---CCccceEEEEEe---
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-----H---RNLVRLLGCCVE---  548 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-----H---~niv~l~g~~~~---  548 (649)
                      .+|.+.++||-|.|.+||.+... ..+-||+|+.+. ...-.+..+.||.+|++++     |   ..||+|+.+|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            56888899999999999999865 577899998854 3445567789999999884     2   369999999975   


Q ss_pred             -CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC
Q 006347          549 -GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE  619 (649)
Q Consensus       549 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~  619 (649)
                       +.+.++|+|++ +-+|..+|... .-+.++...+.+|++||+.||.|||.++  +|||-||||+||||..+
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s-~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYS-NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHh-CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence             55899999999 77888888653 4456899999999999999999999987  69999999999999654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.59  E-value=3.3e-14  Score=147.15  Aligned_cols=150  Identities=35%  Similarity=0.565  Sum_probs=128.5

Q ss_pred             cccceeeccCCcEEEEEEEecCCcEEEEEEecccccc---cHHHHHHHHHHHhcCCCC-CccceEEEEEeCCeEEEEEec
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ---GLEEFMNEVMVISKLQHR-NLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~---~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      |...+.||.|+||.||++...  ..+++|.+......   ..+.|.+|+.+++.+.|+ +++++...+......++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            566789999999999999988  78999998764332   377899999999999887 799999999777778999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~~~  637 (649)
                      +.+++|.+++........+.......++.+++.++.|+|+.+   ++|||+||+||+++... .+|++|||+++.+....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999977743211126888999999999999999999988   99999999999999988 79999999999765443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.58  E-value=1.4e-14  Score=145.81  Aligned_cols=136  Identities=22%  Similarity=0.305  Sum_probs=107.0

Q ss_pred             eeec-cCCcEEEEEEEecCCcEEEEEEecccc-------------cccHHHHHHHHHHHhcCCCCCc--cceEEEEEeCC
Q 006347          487 SKLG-QGGFGPVYWGRLKDGQEIAVKRLSKAS-------------GQGLEEFMNEVMVISKLQHRNL--VRLLGCCVEGE  550 (649)
Q Consensus       487 ~~LG-~G~fG~Vykg~~~~g~~vAVK~l~~~~-------------~~~~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~  550 (649)
                      ..|| .|+.|+||++... +..++||+.....             ......+.+|++++.+++|+++  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4787 8999999999886 7789999875311             1233567889999999988775  77777755432


Q ss_pred             e----EEEEEecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          551 E----KMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       551 ~----~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      .    .++||||+++ .+|.+++.+    ..++..    .+.+|+++|.+||+.+   |+||||||+|||++.++.++|+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence            2    3599999997 689888743    234433    3568999999999998   9999999999999998899999


Q ss_pred             ecCCceeeC
Q 006347          626 DFGMAKIFG  634 (649)
Q Consensus       626 DFGla~~~~  634 (649)
                      |||.++...
T Consensus       185 Dfg~~~~~~  193 (239)
T PRK01723        185 DFDRGELRT  193 (239)
T ss_pred             ECCCcccCC
Confidence            999999864

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.56  E-value=4.3e-15  Score=117.63  Aligned_cols=58  Identities=50%  Similarity=1.109  Sum_probs=51.9

Q ss_pred             CCCeeeeccccCCCCcc--ccCCCChhHHHHHhhccCCeEEEEec---CCceEEEeeccccccc
Q 006347          337 EDGFSKLNKMKVPDFTE--WTSPATEDECREQCLKNCSCIAYAFD---GGIGCMVWRSINLIDI  395 (649)
Q Consensus       337 ~~~f~~~~~~~~p~~~~--~~~~~~~~~C~~~Cl~nCsC~a~~~~---~g~gC~~w~~~~l~~~  395 (649)
                      +|+|++|++|++|+++.  +..+.++++|+++||+||||+||+|.   ++++|++|.+ +|+|+
T Consensus         4 ~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~-~L~d~   66 (66)
T PF08276_consen    4 GDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYG-DLVDL   66 (66)
T ss_pred             CCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcC-EeecC
Confidence            78999999999999976  44679999999999999999999998   4677999999 99874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.51  E-value=3.5e-14  Score=163.28  Aligned_cols=147  Identities=24%  Similarity=0.341  Sum_probs=117.1

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~l  554 (649)
                      .....|.+..+||+|+||+||+|+..+|+.||+|.-+.....   +|.--.+++.+|+   -+-|..+.....-.+..+|
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence            334568888999999999999999988999999987665554   2232333344443   2345555555666788899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-------CCceEEEec
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-------ELNPKISDF  627 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-------~~~~Ki~DF  627 (649)
                      |+||.+.|+|.+++.   ..+.++|.....++.|+++-+++||..+   |||+||||+|.||..       ...+||+||
T Consensus       772 v~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             eeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEec
Confidence            999999999999994   5677999999999999999999999988   999999999999953       345899999


Q ss_pred             CCceee
Q 006347          628 GMAKIF  633 (649)
Q Consensus       628 Gla~~~  633 (649)
                      |-+--+
T Consensus       846 G~siDm  851 (974)
T KOG1166|consen  846 GRSIDM  851 (974)
T ss_pred             ccceee
Confidence            988654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.47  E-value=1.5e-13  Score=150.18  Aligned_cols=141  Identities=24%  Similarity=0.276  Sum_probs=101.0

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccccccc----------------------------------------HHHHHH
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG----------------------------------------LEEFMN  526 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~----------------------------------------~~~f~~  526 (649)
                      +.||.|++|+||+|++.+|+.||||+.+......                                        +-.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            6799999999999999999999999986431110                                        012455


Q ss_pred             HHHHHhcCC----CCCccceEEEEE-eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHHhCC
Q 006347          527 EVMVISKLQ----HRNLVRLLGCCV-EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR-GLLYLHRDS  600 (649)
Q Consensus       527 E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~~  600 (649)
                      |+..+.+++    |.+-+.+-..+. .....+|||||+++++|.++....  ....   .+..++..+++ .+..+|..+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~--~~~~---~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD--EAGL---DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH--hcCC---CHHHHHHHHHHHHHHHHHhCC
Confidence            665555552    333333333332 234679999999999998876321  1112   24456776666 467888877


Q ss_pred             CCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       601 ~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                         ++|+|+||.||++++++.++++|||+++.+..
T Consensus       278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence               99999999999999999999999999998854

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.41  E-value=2.9e-13  Score=110.72  Aligned_cols=67  Identities=25%  Similarity=0.382  Sum_probs=59.7

Q ss_pred             CCCeeeeccccCCCCccccCCCChhHHHHHhhc---cCCeEEEEec-CCceEEEeecccc-ccccccCCCccceEEE
Q 006347          337 EDGFSKLNKMKVPDFTEWTSPATEDECREQCLK---NCSCIAYAFD-GGIGCMVWRSINL-IDIQRLPFGGTDLYIR  408 (649)
Q Consensus       337 ~~~f~~~~~~~~p~~~~~~~~~~~~~C~~~Cl~---nCsC~a~~~~-~g~gC~~w~~~~l-~~~~~~~~~~~~lyvr  408 (649)
                      ..+|+++.++++|++..    .+++||+++|++   ||||+||+|. .+.||.+|.+ +| .+++..++.+.++|+|
T Consensus         8 ~g~fl~~~~~klpd~~~----~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~-~l~~d~~~~~~~g~~Ly~r   79 (80)
T cd00129           8 AGTTLIKIALKIKTTKA----NTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPF-NSMSGVRKEFSHGFDLYEN   79 (80)
T ss_pred             CCeEEEeecccCCcccc----cCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecC-cchhhHHhccCCCceeEeE
Confidence            56899999999999763    689999999999   9999999997 3568999999 99 9998887778999998

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.41  E-value=4.3e-13  Score=112.08  Aligned_cols=73  Identities=44%  Similarity=0.914  Sum_probs=60.8

Q ss_pred             CCCeeeeccccCCCCccccCCCChhHHHHHhhccCCeEEEEecC-CceEEEeeccccccccccCCCccceEEEEe
Q 006347          337 EDGFSKLNKMKVPDFTEWTSPATEDECREQCLKNCSCIAYAFDG-GIGCMVWRSINLIDIQRLPFGGTDLYIRVA  410 (649)
Q Consensus       337 ~~~f~~~~~~~~p~~~~~~~~~~~~~C~~~Cl~nCsC~a~~~~~-g~gC~~w~~~~l~~~~~~~~~~~~lyvrv~  410 (649)
                      .++|.++.++++|++.+.....++++|+++||+||+|+||+|.+ +.+|++|.+ ++.+.+.....+.++||||+
T Consensus        11 ~~~f~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~-~~~~~~~~~~~~~~~yiKv~   84 (84)
T cd01098          11 TDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNGSGGCLLWNG-LLNNLRSLSSGGGTLYLRLA   84 (84)
T ss_pred             CCEEEEeCCeeCCCchhhhccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEec-eecceEeecCCCcEEEEEeC
Confidence            46899999999998876336789999999999999999999985 455999998 88887664444678999985

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.33  E-value=7e-12  Score=119.11  Aligned_cols=132  Identities=22%  Similarity=0.157  Sum_probs=98.9

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecCCCCCh
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      .+.|+.|.++.||++... +..+++|....... ....+..|+.++..+.+.++ .+++.+.  .+..++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence            367899999999999876 77899998754321 23456789999998865554 4555543  3446899999999887


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS--RLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ....        .   ....++.+++++|+.||...  ...++|+|++|.||+++ ++.++++||+.|..-
T Consensus        79 ~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151          79 LTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             cccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence            5320        0   11235678999999999876  33479999999999999 668999999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.28  E-value=1.7e-11  Score=135.69  Aligned_cols=146  Identities=21%  Similarity=0.280  Sum_probs=94.8

Q ss_pred             CcccceeeccCCcEEEEEEEecC-CcEEEEEEecccccc----------------------------------cH-----
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQ----------------------------------GL-----  521 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~----------------------------------~~-----  521 (649)
                      .|+. +.||.|++|+||+|++++ |++||||++++....                                  ..     
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4665 789999999999999987 999999998643110                                  00     


Q ss_pred             -HHHHHHHHHHhcCC----CCCccceEEEEEe-CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHH-HHH
Q 006347          522 -EEFMNEVMVISKLQ----HRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR-GLL  594 (649)
Q Consensus       522 -~~f~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-gL~  594 (649)
                       -.|.+|+.-+.+++    +.+.+.+-..+.+ ..+.+|||||++|+.+.++-.-  .....+..   .++...++ -+.
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l--~~~g~d~~---~la~~~v~~~~~  274 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL--RAAGTDMK---LLAERGVEVFFT  274 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH--HhcCCCHH---HHHHHHHHHHHH
Confidence             12445555444442    4444444343333 4567899999999999875311  11122222   12222221 122


Q ss_pred             HHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecCCceeeCCC
Q 006347          595 YLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFGMAKIFGGN  636 (649)
Q Consensus       595 yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFGla~~~~~~  636 (649)
                      -++..+   ++|+|+||.||+++.++    .+++.|||++..+...
T Consensus       275 Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        275 QVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            233455   99999999999999988    9999999999988543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.19  E-value=2e-10  Score=113.81  Aligned_cols=143  Identities=18%  Similarity=0.273  Sum_probs=113.6

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCC--CCccceEEEEEeCC---eEEEEEecCC
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQH--RNLVRLLGCCVEGE---EKMLIYEYMP  560 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lV~Ey~~  560 (649)
                      +.|+.|..+.||+++..+|+.+++|....... ....++..|++++..+++  .++.+++.+..+..   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            57899999999999987778999998754322 245678999999999975  45678888876543   5689999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS----------------------------------------  600 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------  600 (649)
                      +.++.+.+..    ..++...+..++.+++++|.+||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9988765521    34677888889999999999998531                                        


Q ss_pred             -------------CCceEecCCCCCcEEEcC--CCceEEEecCCceee
Q 006347          601 -------------RLRIIHRDLKASNILLDE--ELNPKISDFGMAKIF  633 (649)
Q Consensus       601 -------------~~~iiHrDlkp~NILl~~--~~~~Ki~DFGla~~~  633 (649)
                                   ...++|+|++|.||++++  +..+.|+||+.+..-
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                         245899999999999998  667899999998863

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.19  E-value=1.4e-11  Score=145.70  Aligned_cols=95  Identities=18%  Similarity=0.263  Sum_probs=74.8

Q ss_pred             cCCC-CCccceEEEE-------EeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 006347          533 KLQH-RNLVRLLGCC-------VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI  604 (649)
Q Consensus       533 ~l~H-~niv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  604 (649)
                      .++| +||+++++++       .+....++++||+ .++|.++|..  ....+++.+++.++.||++||+|||+++   |
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            3445 5888888877       3334567889988 6699999964  2356899999999999999999999987   9


Q ss_pred             EecCCCCCcEEEcC-------------------CCceEEEecCCceee
Q 006347          605 IHRDLKASNILLDE-------------------ELNPKISDFGMAKIF  633 (649)
Q Consensus       605 iHrDlkp~NILl~~-------------------~~~~Ki~DFGla~~~  633 (649)
                      +||||||+||||+.                   ++.+||+|||+++..
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~  149 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRRE  149 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccc
Confidence            99999999999954                   455667777777653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=1.6e-11  Score=138.63  Aligned_cols=144  Identities=28%  Similarity=0.378  Sum_probs=110.9

Q ss_pred             cceeeccCCcEEEEEEEec-CCcEEEEEEec----c-cccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          485 LSSKLGQGGFGPVYWGRLK-DGQEIAVKRLS----K-ASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~----~-~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ..+.+|.|++|.|+..... .....+.|...    . ..+. ....+..|..+-..++|+|++..+..+.+....+-+||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            3468999999977766543 23333333221    1 1111 11225567777788899999888888777777777799


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |++. +|..++..   ...+...++..+..|+.+|+.|||+.+   |.|||+|++|+++..++.+||+|||.+..+.-
T Consensus       402 ~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  402 YCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             cccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeecc
Confidence            9999 99988843   346788889999999999999999998   99999999999999999999999999998743

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.17  E-value=5.2e-10  Score=108.18  Aligned_cols=137  Identities=14%  Similarity=0.097  Sum_probs=100.4

Q ss_pred             eeeccCCcEEEEEEEecC-------CcEEEEEEecccc----------------------cccHHHHH----HHHHHHhc
Q 006347          487 SKLGQGGFGPVYWGRLKD-------GQEIAVKRLSKAS----------------------GQGLEEFM----NEVMVISK  533 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-------g~~vAVK~l~~~~----------------------~~~~~~f~----~E~~~l~~  533 (649)
                      ..||.|.-+.||.|.-.+       +..+|||..+...                      ....+.+.    +|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            478999999999998653       4799999654210                      01122344    79999999


Q ss_pred             CC--CCCccceEEEEEeCCeEEEEEecCCCCChhh-hhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEecCC
Q 006347          534 LQ--HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA-LLFDPLKKERLDWRKRFNIIEGISRGLLYL-HRDSRLRIIHRDL  609 (649)
Q Consensus       534 l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDl  609 (649)
                      ++  ..++.+++++    ...+|||||+.+..+.. .+.    ...++..+...+..+++.+|..| |+.+   |||+||
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL  151 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL  151 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            95  3567777765    56789999997654422 221    22344455667889999999999 7776   999999


Q ss_pred             CCCcEEEcCCCceEEEecCCceeeCC
Q 006347          610 KASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       610 kp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++.|||+++ +.++|+|||-|.....
T Consensus       152 s~~NIL~~~-~~v~iIDF~qav~~~h  176 (197)
T cd05146         152 SEYNMLWHD-GKVWFIDVSQSVEPTH  176 (197)
T ss_pred             CHHHEEEEC-CcEEEEECCCceeCCC
Confidence            999999974 6799999999987754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.10  E-value=6.4e-10  Score=104.10  Aligned_cols=133  Identities=23%  Similarity=0.327  Sum_probs=103.8

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEE-ecccc--c-----ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKR-LSKAS--G-----QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~-l~~~~--~-----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ..+++|+-+.+|.+.+. |.++.+|. +++.=  +     --.....+|+.+|.+++--.|.--.-+..+.+...|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            35789999999999775 44455552 32211  1     1234577899999999766666666677888899999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++..|.+.+...          +..++..+-+-+.-||..+   |+|+||.++||++..+. +.++||||++.-.
T Consensus        81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642          81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            9999998888432          3567888888999999998   99999999999998876 9999999999643

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=1.6e-09  Score=101.01  Aligned_cols=149  Identities=21%  Similarity=0.291  Sum_probs=110.5

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEE-eccc-------ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKR-LSKA-------SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~-l~~~-------~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..+.+-||+-+.|+++... |+...||. ..+.       ..-..++.++|++++.+++--.|.--.-++.+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            3578999999999999988 67666663 2221       1123467889999999997666665556677888888999


Q ss_pred             ecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCCcee
Q 006347          557 EYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKI  632 (649)
Q Consensus       557 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGla~~  632 (649)
                      ||+++ .++.+++.........+ .....++..|-+.+.-||.++   |||+||..+||+|..++.   +.++||||+..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            99977 46788875433333222 223678889999999999998   999999999999976654   58999999887


Q ss_pred             eCCCCC
Q 006347          633 FGGNQD  638 (649)
Q Consensus       633 ~~~~~~  638 (649)
                      -...+.
T Consensus       166 s~~~ED  171 (229)
T KOG3087|consen  166 SRLPED  171 (229)
T ss_pred             ccCccc
Confidence            544443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.01  E-value=1.7e-09  Score=110.16  Aligned_cols=148  Identities=26%  Similarity=0.339  Sum_probs=99.3

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecc---cccccHHHHHHHHHHHhcCCC-----------CCccceEEEEE
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH-----------RNLVRLLGCCV  547 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~---~~~~~~~~f~~E~~~l~~l~H-----------~niv~l~g~~~  547 (649)
                      +...+.||.|+++.||.++.. +++++|||....   ......+++++|...+..+.+           .-++.+--.-.
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            445678999999999999987 589999997742   233466788888877766543           12222211111


Q ss_pred             e--------CC--------eEEEEEecCCCCChhhhhc---CCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEec
Q 006347          548 E--------GE--------EKMLIYEYMPNRSLDALLF---DPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR  607 (649)
Q Consensus       548 ~--------~~--------~~~lV~Ey~~~gsL~~~l~---~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  607 (649)
                      .        ..        +.+++|+-+ .++|.+++.   ... ....+....++.+..|+.+.+++||..+   ++|+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHg  169 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHG  169 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEES
T ss_pred             cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEec
Confidence            1        11        235677777 678877753   211 1233455667778899999999999998   9999


Q ss_pred             CCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          608 DLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       608 Dlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+|++++++|.++++||+-++..+
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g  196 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAG  196 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETT
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecC
Confidence            999999999999999999999887654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.01  E-value=8.4e-11  Score=114.60  Aligned_cols=136  Identities=26%  Similarity=0.457  Sum_probs=112.7

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      .+|.+...|..|+|+++ |..+++|.+.-.  ...--+.|..|.-.++-+.||||..++|.|....+..++..|||.|||
T Consensus       196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl  274 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL  274 (448)
T ss_pred             hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence            47888899999999998 556666776432  223446888999899999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      ...|++. ..-.++-.+..+++.+||+|++|||+-. +-|..-.|.+..+++|++.+++|+
T Consensus       275 ynvlhe~-t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  275 YNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             HHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee
Confidence            9999763 3345678889999999999999999875 224444788999999999998875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.95  E-value=9e-11  Score=127.14  Aligned_cols=142  Identities=27%  Similarity=0.287  Sum_probs=115.7

Q ss_pred             eeccCCcEEEEEEEe----cCCcEEEEEEeccccc--ccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCC
Q 006347          488 KLGQGGFGPVYWGRL----KDGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~----~~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .+|+|.||.|+.+.-    ..+..+|+|.+++...  ........|..++..++ ||.+|++.-.+......+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            378999999987642    3467788888865432  12225667888889997 9999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +|.|...+.+   ....+..........++-+++++|+.+   |+|||+|++||+++.+|++|+.|||+.+..-.
T Consensus        81 gg~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~  149 (612)
T KOG0603|consen   81 GGDLFTRLSK---EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK  149 (612)
T ss_pred             cchhhhcccc---CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHh
Confidence            9999777743   344566666667788999999999887   99999999999999999999999999998643

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.87  E-value=4.6e-08  Score=99.83  Aligned_cols=142  Identities=18%  Similarity=0.095  Sum_probs=102.4

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccccc-----------ccHHHHHHHHHHHhcCC--CCCccceEEEEEe-----
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG-----------QGLEEFMNEVMVISKLQ--HRNLVRLLGCCVE-----  548 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~-----------~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~-----  548 (649)
                      +.+-+..-..|++..+. |+.+.||+......           .....+.+|...+.++.  .-..+.++++...     
T Consensus        28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~  106 (268)
T PRK15123         28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA  106 (268)
T ss_pred             cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence            34444444457777664 77899997643210           11124789999998885  3445566667654     


Q ss_pred             CCeEEEEEecCCCC-ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-------CC
Q 006347          549 GEEKMLIYEYMPNR-SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-------EL  620 (649)
Q Consensus       549 ~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-------~~  620 (649)
                      ....+||+|++++- +|.+++.+.. ....+...+..++.++++.+.-||+.+   |+|+|++++|||++.       +.
T Consensus       107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~  182 (268)
T PRK15123        107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDL  182 (268)
T ss_pred             cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCc
Confidence            23578999999886 8998874321 234456677789999999999999998   999999999999985       46


Q ss_pred             ceEEEecCCceee
Q 006347          621 NPKISDFGMAKIF  633 (649)
Q Consensus       621 ~~Ki~DFGla~~~  633 (649)
                      .+.++||+.++..
T Consensus       183 ~~~LIDl~r~~~~  195 (268)
T PRK15123        183 KLSVIDLHRAQIR  195 (268)
T ss_pred             eEEEEECCccccc
Confidence            8999999998753

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.82  E-value=5.2e-09  Score=113.44  Aligned_cols=100  Identities=35%  Similarity=0.600  Sum_probs=90.8

Q ss_pred             HhcCCCCCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006347          531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLK  610 (649)
Q Consensus       531 l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk  610 (649)
                      |+.+.|.|+.+++|.+.++...++|.+|++.|+|.+.+..  ....++|.-...++++|++||+|||...  -..|+.++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~   76 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK   76 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence            3568899999999999999999999999999999999975  4556899999999999999999999864  12999999


Q ss_pred             CCcEEEcCCCceEEEecCCceeeC
Q 006347          611 ASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       611 p~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++|.++|....+||+|||+..+..
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cccceeeeeEEEEechhhhccccc
Confidence            999999999999999999998874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=5.3e-09  Score=107.32  Aligned_cols=89  Identities=27%  Similarity=0.485  Sum_probs=70.5

Q ss_pred             CCCCccceEEEEEeC---------------------------CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHH
Q 006347          535 QHRNLVRLLGCCVEG---------------------------EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE  587 (649)
Q Consensus       535 ~H~niv~l~g~~~~~---------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~  587 (649)
                      +|||||++.+++.+.                           ...|+||.-++ -+|.+++-.    ...+...+.-|+.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~----~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT----RHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc----CCCchHHHHHHHH
Confidence            588888888877542                           23588988874 488888843    3456677777899


Q ss_pred             HHHHHHHHHHhCCCCceEecCCCCCcEEE--cCCCc--eEEEecCCce
Q 006347          588 GISRGLLYLHRDSRLRIIHRDLKASNILL--DEELN--PKISDFGMAK  631 (649)
Q Consensus       588 ~ia~gL~yLH~~~~~~iiHrDlkp~NILl--~~~~~--~Ki~DFGla~  631 (649)
                      |+++|+.|||.++   |.|||+|++|||+  |+|..  ..|+|||.+-
T Consensus       349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceee
Confidence            9999999999998   9999999999998  45544  5799999875

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.79  E-value=3.2e-08  Score=95.37  Aligned_cols=127  Identities=25%  Similarity=0.301  Sum_probs=83.3

Q ss_pred             EEEEEEecCCcEEEEEEecccc--------------c-------c-----cHHHHHHHHHHHhcCCCC--CccceEEEEE
Q 006347          496 PVYWGRLKDGQEIAVKRLSKAS--------------G-------Q-----GLEEFMNEVMVISKLQHR--NLVRLLGCCV  547 (649)
Q Consensus       496 ~Vykg~~~~g~~vAVK~l~~~~--------------~-------~-----~~~~f~~E~~~l~~l~H~--niv~l~g~~~  547 (649)
                      -||.|...+|..+|||.-+...              .       .     ......+|.+.|.++...  ++.+++.+  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            3899999889999999754210              0       0     123467899999999755  56777655  


Q ss_pred             eCCeEEEEEecCC--CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          548 EGEEKMLIYEYMP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL-HRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       548 ~~~~~~lV~Ey~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                        ....|||||++  +..+..+...     .++......++.+++..+..+ |..+   |+|+||.+.|||++++ .+.|
T Consensus        79 --~~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   79 --NRNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             --ETTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred             --eCCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence              24579999998  5555443311     111234456777777766664 5666   9999999999999998 9999


Q ss_pred             EecCCceeeCC
Q 006347          625 SDFGMAKIFGG  635 (649)
Q Consensus       625 ~DFGla~~~~~  635 (649)
                      +|||.|.....
T Consensus       148 IDf~qav~~~~  158 (188)
T PF01163_consen  148 IDFGQAVDSSH  158 (188)
T ss_dssp             --GTTEEETTS
T ss_pred             EecCcceecCC
Confidence            99999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.76  E-value=1.2e-09  Score=124.26  Aligned_cols=143  Identities=20%  Similarity=0.227  Sum_probs=112.8

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccc-cccHHHHHHHHHH--HhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS-GQGLEEFMNEVMV--ISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~-~~~~~~f~~E~~~--l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++...+.||.+.|=+|.+++.++|. |+||++-+.. .-..+.|.++++-  ...++|||.+.+.-+-..+...|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4555689999999999999999887 8889875443 3455666655544  4445899999887776666677888888


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ..+ +|.+.|.   -+.-+...+..-|+.|+..||.-+|..+   |.|+|||.+|||+..-.=+.|+||.--|.
T Consensus       103 vkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen  103 VKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKP  169 (1431)
T ss_pred             Hhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCC
Confidence            843 6766662   2344677788889999999999999988   99999999999999999999999986554

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.67  E-value=3.2e-09  Score=120.00  Aligned_cols=163  Identities=26%  Similarity=0.376  Sum_probs=123.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec--CCcEEEEEEecccc--cccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV  555 (649)
                      ..|.+.+.||+|+|+.|-.....  ....+|+|.+....  .........|..+-..+. |+|++++++...+.+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            45666778999999999887764  34456777665432  223344455777777776 99999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH-RDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~  633 (649)
                      +||..++++.+.+... .....+....-.+..|+..++.|+| +.+   +.||||||+|.+++..+ ..|++|||+|..+
T Consensus       100 ~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence            9999999998777321 1113445556678899999999999 776   99999999999999999 9999999999988


Q ss_pred             CC-CCCccccCceee
Q 006347          634 GG-NQDQADTGRVVG  647 (649)
Q Consensus       634 ~~-~~~~~~~~~~~G  647 (649)
                      .. +..........|
T Consensus       176 ~~~~g~~~~~~~~~g  190 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCG  190 (601)
T ss_pred             cccCCcceeeecccC
Confidence            66 333333333333

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.62  E-value=1.2e-07  Score=83.95  Aligned_cols=89  Identities=28%  Similarity=0.461  Sum_probs=63.6

Q ss_pred             eEEEeeCCcEEEEcCC-ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           88 IITISEDGNLVLVNGQ-KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        88 ~l~~~~~G~L~l~~~~-~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      ++.++.||+||+++.. +.++|++++.........+.|.++|||||++. .+.++|+|=  + .   +            
T Consensus        23 ~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~S~--t-~---~------------   83 (114)
T smart00108       23 TLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDG-DGRVVWSSN--T-T---G------------   83 (114)
T ss_pred             ccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeC-CCCEEEEec--c-c---C------------
Confidence            3556689999999875 58999999863333346889999999999985 467899981  1 0   1            


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecC
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSG  209 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg  209 (649)
                                   ..+.|.+.++.+|+..++-. .+.+.|.|.
T Consensus        84 -------------~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf  112 (114)
T smart00108       84 -------------ANGNYVLVLLDDGNLVIYDS-DGNFLWQSF  112 (114)
T ss_pred             -------------CCCceEEEEeCCCCEEEECC-CCCEEeCCC
Confidence                         24567888999998655422 346788764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.61  E-value=2.9e-07  Score=98.08  Aligned_cols=140  Identities=21%  Similarity=0.319  Sum_probs=113.7

Q ss_pred             EEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEEEEEecCCC-CChhhhh
Q 006347          495 GPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKMLIYEYMPN-RSLDALL  568 (649)
Q Consensus       495 G~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~Ey~~~-gsL~~~l  568 (649)
                      .+.||+... +|..+++|+++....+.....-.-++..+++.|.|+|++..++..    +....+||+|+|+ ++|.++.
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            578999876 899999999955444444344556788999999999999998873    4467899999985 6787776


Q ss_pred             cCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          569 FDPL------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       569 ~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +...            ....+++..++.++.|+..||.++|+.+   +.-+-|.|++||++.+.+++|+..|...++..+
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            5421            2234678899999999999999999998   888999999999999999999999999888655


Q ss_pred             C
Q 006347          637 Q  637 (649)
Q Consensus       637 ~  637 (649)
                      .
T Consensus       447 ~  447 (655)
T KOG3741|consen  447 P  447 (655)
T ss_pred             C
Confidence            5

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.57  E-value=2e-07  Score=82.91  Aligned_cols=89  Identities=26%  Similarity=0.443  Sum_probs=63.8

Q ss_pred             EEEee-CCcEEEEcCC-ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           89 ITISE-DGNLVLVNGQ-KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        89 l~~~~-~G~L~l~~~~-~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      +.++. ||+|++++.. ++++|++++.........+.|.++|||||++. ++.++|+|=-.                   
T Consensus        24 ~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~S~~~-------------------   83 (116)
T cd00028          24 LIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDG-SGTVVWSSNTT-------------------   83 (116)
T ss_pred             CCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcC-CCcEEEEeccc-------------------
Confidence            44565 9999999765 58999999863223456799999999999985 46789997210                   


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                  .+.+.+.+.|+.+|+..++-. .+.+.|.|..
T Consensus        84 ------------~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf~  114 (116)
T cd00028          84 ------------RVNGNYVLVLLDDGNLVLYDS-DGNFLWQSFD  114 (116)
T ss_pred             ------------CCCCceEEEEeCCCCEEEECC-CCCEEEcCCC
Confidence                        024567888999998555432 3567888754

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.53  E-value=2.8e-07  Score=75.30  Aligned_cols=71  Identities=39%  Similarity=0.889  Sum_probs=55.4

Q ss_pred             CCCeeeeccccCCCCcc-ccCCCChhHHHHHhhc-cCCeEEEEecC-CceEEEee-ccccccccccCCCccceEEE
Q 006347          337 EDGFSKLNKMKVPDFTE-WTSPATEDECREQCLK-NCSCIAYAFDG-GIGCMVWR-SINLIDIQRLPFGGTDLYIR  408 (649)
Q Consensus       337 ~~~f~~~~~~~~p~~~~-~~~~~~~~~C~~~Cl~-nCsC~a~~~~~-g~gC~~w~-~~~l~~~~~~~~~~~~lyvr  408 (649)
                      ...|..++++.+++... .....++++|++.|++ +|+|.||.|.. +.+|.+|. + ++.+.+..+..+.++|.|
T Consensus         3 ~~~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~-~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473        3 DDCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSES-SLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             CceeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCC-ccccceecccCCceeEEe
Confidence            45789999999986654 3456799999999999 99999999974 55699999 6 777776444555566665

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.52  E-value=9.5e-07  Score=86.98  Aligned_cols=109  Identities=24%  Similarity=0.260  Sum_probs=88.0

Q ss_pred             cHHHHHHHHHHHhcCC--CCCccceEEEEEeCC----eEEEEEecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHH
Q 006347          520 GLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGE----EKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRG  592 (649)
Q Consensus       520 ~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~----~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g  592 (649)
                      ......+|...+.++.  .-..++.+++.....    ..+||+|++++ .+|.+++.+.   ...+......++.++++.
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRALARL  130 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHHHHH
Confidence            3456788888888884  455678888877643    45899999987 4799998532   125666778899999999


Q ss_pred             HHHHHhCCCCceEecCCCCCcEEEcCCC---ceEEEecCCceeeC
Q 006347          593 LLYLHRDSRLRIIHRDLKASNILLDEEL---NPKISDFGMAKIFG  634 (649)
Q Consensus       593 L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~Ki~DFGla~~~~  634 (649)
                      ++-||+.+   |+|+|+++.|||++.+.   .+.++||+-++...
T Consensus       131 i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  131 IAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            99999998   99999999999999887   89999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.51  E-value=8.2e-07  Score=88.30  Aligned_cols=137  Identities=21%  Similarity=0.235  Sum_probs=94.9

Q ss_pred             cccceeeccCCcEEEEEEEecCCcEEEEEEeccc--------------------c--cccHHHHHHHHHHHhcCCCC--C
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--------------------S--GQGLEEFMNEVMVISKLQHR--N  538 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--------------------~--~~~~~~f~~E~~~l~~l~H~--n  538 (649)
                      ..+.++||-|.-+.||.|..+.|.++|||.=+..                    +  .-......+|.++|.+|+-.  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            3456799999999999999999999999942110                    0  01123466888999999644  6


Q ss_pred             ccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC
Q 006347          539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       539 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~  618 (649)
                      +.+.+++    +...+||||+++-.|...--     ..-+..+   |+..|++-+.-+-..+   |||+|+.+=||++++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~-----~~en~~~---il~~il~~~~~~~~~G---iVHGDlSefNIlV~~  237 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLRL-----DVENPDE---ILDKILEEVRKAYRRG---IVHGDLSEFNILVTE  237 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeecccC-----cccCHHH---HHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence            7666655    56679999998866643310     1122333   3333444444333444   999999999999999


Q ss_pred             CCceEEEecCCceeeC
Q 006347          619 ELNPKISDFGMAKIFG  634 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~  634 (649)
                      ++.+.++||-=+...+
T Consensus       238 dg~~~vIDwPQ~v~~~  253 (304)
T COG0478         238 DGDIVVIDWPQAVPIS  253 (304)
T ss_pred             CCCEEEEeCcccccCC
Confidence            9999999997666543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.47  E-value=4.4e-07  Score=100.22  Aligned_cols=142  Identities=19%  Similarity=0.255  Sum_probs=94.2

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccc--------------------------c--------------HHHHHH
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ--------------------------G--------------LEEFMN  526 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~--------------------------~--------------~~~f~~  526 (649)
                      +.|+.++-|+||+|++++|++||||+.+..-..                          .              +-.+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            578899999999999999999999987542110                          0              012444


Q ss_pred             HHHHHhcCC----CCCccceEEEEE-eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCC
Q 006347          527 EVMVISKLQ----HRNLVRLLGCCV-EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL-LYLHRDS  600 (649)
Q Consensus       527 E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~  600 (649)
                      |..-+.+++    +..-+++-..+. -..+..|+|||++|-.+.++..-  +....+..   .|+..++++. .-+-..+
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l--~~~g~d~k---~ia~~~~~~f~~q~~~dg  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL--KSAGIDRK---ELAELLVRAFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH--HhcCCCHH---HHHHHHHHHHHHHHHhcC
Confidence            555444442    222233333333 34677899999999999888532  22344533   3343333322 2222234


Q ss_pred             CCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       601 ~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                         +.|.|..|.||+++.++.+-+.|||+...+...
T Consensus       286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             ---ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence               999999999999999999999999999887543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.44  E-value=1e-07  Score=103.54  Aligned_cols=148  Identities=23%  Similarity=0.263  Sum_probs=118.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec--CCcEEEEEEecccccccHH--HHHHHHHHHhcC-CCCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASGQGLE--EFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~~~~~~~--~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  553 (649)
                      .+.+|.++..||.|.|+.|++...+  ++..+++|.+.+.......  .-..|+.+...+ .|.++++....+.+..+.+
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            3457888899999999999998755  5778999987654322222  223456555555 5888999888888888889


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCcee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKI  632 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~~  632 (649)
                      +=.||++++++...+   .-...++...++++..+++.++.++|+..   ++|+|+||+||++..+ +..++.|||.+..
T Consensus       343 ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             CchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence            999999999987665   22345778888999999999999999877   9999999999999886 8899999999874

>PRK09902 hypothetical protein; Provisional

Probab=98.44  E-value=5.5e-06  Score=80.56  Aligned_cols=140  Identities=16%  Similarity=0.139  Sum_probs=105.0

Q ss_pred             eccCCcEEEEEEEecCCcEEEEEEeccc------ccccHHHHHHHHHHHhcCC--CCCccceEEEEEeCC----eEEEEE
Q 006347          489 LGQGGFGPVYWGRLKDGQEIAVKRLSKA------SGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGE----EKMLIY  556 (649)
Q Consensus       489 LG~G~fG~Vykg~~~~g~~vAVK~l~~~------~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~----~~~lV~  556 (649)
                      -|+||-+.|++-.+. |..+-+|+-..-      .+.+...|.+|...|.++.  ...+.+.+.+.....    ..+||+
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            456888889988776 446888876511      1457789999999999995  344556663322222    357999


Q ss_pred             ecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc--eEEEecCCceee
Q 006347          557 EYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN--PKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--~Ki~DFGla~~~  633 (649)
                      |-+++ .+|.+++.+. ...+.+...+..++.++++.+.-||+.+   +.|+|+-+.||+++.++.  ++++||--++..
T Consensus       105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            97753 6898888442 1234577778899999999999999998   999999999999986666  999999877653

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.36  E-value=8.8e-07  Score=84.39  Aligned_cols=62  Identities=26%  Similarity=0.199  Sum_probs=54.3

Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+|.+++.+  ....+++.++..|+.||++||.|||+.+         ||+|||+++++.+|+  ||+++.....
T Consensus         1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~   62 (176)
T smart00750        1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE   62 (176)
T ss_pred             CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc
Confidence            689999954  2456999999999999999999999875         999999999999999  9999987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.34  E-value=2.1e-06  Score=94.56  Aligned_cols=142  Identities=18%  Similarity=0.239  Sum_probs=91.6

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEeccccccc-------------------------------------HHHHHHHHH
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-------------------------------------LEEFMNEVM  529 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~-------------------------------------~~~f~~E~~  529 (649)
                      +.|+.-+.|+||+|++++|+.||||+-+..-+..                                     +-.|.+|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            6899999999999999999999999865421110                                     112555554


Q ss_pred             HHhcC----CCCCc---cceEEEEE-eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 006347          530 VISKL----QHRNL---VRLLGCCV-EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR  601 (649)
Q Consensus       530 ~l~~l----~H~ni---v~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  601 (649)
                      -..++    .|-++   |++-.++. -...+.|+||||+|..+.+...  ..+..++...+..-+.++..-+-+-  .  
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~--i~~~gi~~~~i~~~l~~~~~~qIf~--~--  320 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDA--IDKRGISPHDILNKLVEAYLEQIFK--T--  320 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHH--HHHcCCCHHHHHHHHHHHHHHHHHh--c--
Confidence            44333    35551   11222222 2346889999999998877643  2334455554433333322222222  2  


Q ss_pred             CceEecCCCCCcEEEcC----CCceEEEecCCceeeCC
Q 006347          602 LRIIHRDLKASNILLDE----ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       602 ~~iiHrDlkp~NILl~~----~~~~Ki~DFGla~~~~~  635 (649)
                       +++|+|-.|.||++..    +..+.+-|||+.+.+..
T Consensus       321 -GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 -GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             -CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence             3999999999999983    67899999999987643

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.32  E-value=2e-06  Score=94.74  Aligned_cols=122  Identities=19%  Similarity=0.257  Sum_probs=98.9

Q ss_pred             cCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHH
Q 006347          503 KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR  582 (649)
Q Consensus       503 ~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~  582 (649)
                      .++.+|.|...+...+.......+-++.++.++||||++++.........|||+|-+.  -|..++..      +.....
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v  106 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEV  106 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHH
Confidence            3688899988876554334556777889999999999999999999999999999873  46666633      234444


Q ss_pred             HHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       583 ~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      .-.+.||+.||.|||+.+  .++|++|.-.-|++++.|.-||.+|-++....
T Consensus       107 ~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  107 CLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            556899999999999776  59999999999999999999999998876543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.30  E-value=1.2e-05  Score=80.35  Aligned_cols=133  Identities=16%  Similarity=0.182  Sum_probs=86.9

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCC--CccceEEEEEeCCeEEEEEecCCCCC-
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR--NLVRLLGCCVEGEEKMLIYEYMPNRS-  563 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~~~lV~Ey~~~gs-  563 (649)
                      ..||+|..+.||+.   .+..+++|.....  .......+|.+++..+..-  .+.+.+++..+.+...+|||+++|.. 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            58999999999984   2456778876542  2345578899999988643  35778888888888889999998863 


Q ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHHHHHHH---------------------------------------HHHHh-CCCCc
Q 006347          564 LDALLFDPLKKERLDWRKRFNIIEGISRGL---------------------------------------LYLHR-DSRLR  603 (649)
Q Consensus       564 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL---------------------------------------~yLH~-~~~~~  603 (649)
                      +...+..       +......++..+++.+                                       .+|.. .....
T Consensus        82 ~~~~~~~-------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  154 (226)
T TIGR02172        82 FSRIISD-------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST  154 (226)
T ss_pred             hhhhhcC-------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence            2211110       0111111111122211                                       22221 12345


Q ss_pred             eEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          604 IIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       604 iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++|+|+.|.||++++++ +.|+||+.|..
T Consensus       155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             eEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            78999999999999888 99999998875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.26  E-value=7.1e-07  Score=97.16  Aligned_cols=149  Identities=25%  Similarity=0.332  Sum_probs=116.8

Q ss_pred             cccceeecc--CCcEEEEEEEe--c-CCcEEEEEEecc--cccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEE
Q 006347          483 FQLSSKLGQ--GGFGPVYWGRL--K-DGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       483 f~~~~~LG~--G~fG~Vykg~~--~-~g~~vAVK~l~~--~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l  554 (649)
                      |-....+|.  |.+|.||++..  . ++..+|+|+-+.  ..++....=.+|.....+++ |+|.++....+..++..++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            445578999  99999999987  3 688899998432  22334444456777777774 9999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR----GLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGM  629 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGl  629 (649)
                      -+|++ +.+|.++....  ...+.....+.+..+..+    ||.++|...   |+|-|+||.||++.++ ..+|+.|||+
T Consensus       196 qtE~~-~~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~  269 (524)
T KOG0601|consen  196 QTELC-GESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGL  269 (524)
T ss_pred             eeccc-cchhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcce
Confidence            99988 57888887542  222445555666666666    999999987   9999999999999999 8999999999


Q ss_pred             ceeeCCCC
Q 006347          630 AKIFGGNQ  637 (649)
Q Consensus       630 a~~~~~~~  637 (649)
                      ...++...
T Consensus       270 v~~i~~~~  277 (524)
T KOG0601|consen  270 VSKISDGN  277 (524)
T ss_pred             eEEccCCc
Confidence            99886554

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.21  E-value=1.5e-05  Score=80.52  Aligned_cols=141  Identities=16%  Similarity=0.152  Sum_probs=88.6

Q ss_pred             eeccCCc-EEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCCCCChh
Q 006347          488 KLGQGGF-GPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLD  565 (649)
Q Consensus       488 ~LG~G~f-G~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~  565 (649)
                      .|-.|.. ..||+.... +..+.||......   .....+|++++..+. +--+.+++++....+..++|||+++|.+|.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            4555655 789999875 4678888775432   346778999888883 455678888877776789999999998876


Q ss_pred             hhh-------------------cCCCC-CCCCC--HHHHHHHHH--------------------HHHHHHHHHHh----C
Q 006347          566 ALL-------------------FDPLK-KERLD--WRKRFNIIE--------------------GISRGLLYLHR----D  599 (649)
Q Consensus       566 ~~l-------------------~~~~~-~~~l~--~~~~~~i~~--------------------~ia~gL~yLH~----~  599 (649)
                      ...                   +.... ..+..  ...++....                    .+...+..|-.    .
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE  160 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence            442                   11000 00111  001110000                    01111222211    1


Q ss_pred             CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       600 ~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ..+.++|+|+.|.|||++++....|+||+.|..
T Consensus       161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            234599999999999999988889999999875

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.21  E-value=6.2e-06  Score=79.78  Aligned_cols=105  Identities=20%  Similarity=0.229  Sum_probs=83.5

Q ss_pred             HHHHHHHhcCCC-CCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCc
Q 006347          525 MNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR  603 (649)
Q Consensus       525 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  603 (649)
                      ..|..++..+++ +++++++|+|    ..++|.||.+.+++...-..-.+-...+|..|.+||.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            357888888876 6999999999    34789999987766422100011123589999999999999999999865556


Q ss_pred             eEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          604 IIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       604 iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +.-+|++|+|+-+++++++|++|...+...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            888999999999999999999999887665

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.20  E-value=3e-05  Score=77.09  Aligned_cols=145  Identities=25%  Similarity=0.221  Sum_probs=88.5

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCC--CCccceEEEEEeCC---eEEEEEecCC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH--RNLVRLLGCCVEGE---EKMLIYEYMP  560 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lV~Ey~~  560 (649)
                      ++.|+.|..+.||+....+ ..+++|.....  .....+..|..++..+..  ..+.+++.+.....   ..+++||+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3688999999999999987 69999987543  456778899999888853  34677887654433   4689999999


Q ss_pred             CCChhh----------------hh---cCC-CCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 006347          561 NRSLDA----------------LL---FDP-LKKERLDWRK---------RFNI------------IEGISR-GLLYLHR  598 (649)
Q Consensus       561 ~gsL~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~ia~-gL~yLH~  598 (649)
                      +..+..                .+   +.. .......+..         ....            ...+.+ .+..+++
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            988877                11   011 0111111111         0000            111222 2333332


Q ss_pred             ----CCCCceEecCCCCCcEEEc-CCCceEEEecCCceee
Q 006347          599 ----DSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF  633 (649)
Q Consensus       599 ----~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~  633 (649)
                          .....++|+|+.|.|||++ +++.+.|+||+.+..-
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence                2445699999999999999 6666689999998764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.12  E-value=5.5e-07  Score=96.38  Aligned_cols=81  Identities=25%  Similarity=0.375  Sum_probs=72.0

Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..+|.|+++...+|.++|.++......++...+.++.|++.|+.|   ++   .+|||+||.||....+..+||.||||.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence            468999999999999999766566677899999999999999999   44   999999999999999999999999999


Q ss_pred             eeeCCCC
Q 006347          631 KIFGGNQ  637 (649)
Q Consensus       631 ~~~~~~~  637 (649)
                      .......
T Consensus       404 ts~~~~~  410 (516)
T KOG1033|consen  404 TSQDKDE  410 (516)
T ss_pred             eecccCC
Confidence            8875544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.12  E-value=6.4e-05  Score=73.52  Aligned_cols=139  Identities=16%  Similarity=0.196  Sum_probs=90.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHH---------HHHHHHHhcCC---CCCccceEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEF---------MNEVMVISKLQ---HRNLVRLLGCC  546 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f---------~~E~~~l~~l~---H~niv~l~g~~  546 (649)
                      ..++|+..+.+-....-.|.+-..+ |....+|.........++.|         .+++..+.+++   -...+.++.+.
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            4467777777777666666665555 68888887654332222222         23333333332   22333333332


Q ss_pred             Ee-----CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          547 VE-----GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       547 ~~-----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      .-     ....+|+|||++|..|.++..       ++.    .++..+.+++.-||+.+   +.|+|..|.|+++.+++ 
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-  172 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-  172 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-
Confidence            21     234568999999988866541       222    25566788899999998   99999999999999655 


Q ss_pred             eEEEecCCceee
Q 006347          622 PKISDFGMAKIF  633 (649)
Q Consensus       622 ~Ki~DFGla~~~  633 (649)
                      ++++||+..+..
T Consensus       173 i~iID~~~k~~~  184 (229)
T PF06176_consen  173 IRIIDTQGKRMS  184 (229)
T ss_pred             EEEEECcccccc
Confidence            999999988764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.11  E-value=3e-05  Score=68.57  Aligned_cols=100  Identities=27%  Similarity=0.452  Sum_probs=67.2

Q ss_pred             CeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEe-cCCCCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcc
Q 006347           36 DAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVA-NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSN  114 (649)
Q Consensus        36 ~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~A-nr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~  114 (649)
                      +.+.+.+|.+.|-|...|+      -+.|..  ..+++|.. +...... ..+.+.|..||||||+|..+.++|+|... 
T Consensus        12 ~p~~~~s~~~~L~l~~dGn------Lvl~~~--~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~-   81 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN------LVLYDS--NGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFDY-   81 (114)
T ss_dssp             EEEEECETTEEEEEETTSE------EEEEET--TTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTTS-
T ss_pred             cccccccccccceECCCCe------EEEEcC--CCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecCC-
Confidence            4565655889998887764      244543  25779999 4444332 45789999999999999999999998443 


Q ss_pred             cccccccceeec--ccCeEEeeCCCCceEeeecCCCc
Q 006347          115 LVNNSTSAQLLD--SGNLVLRDNINRAIVWESFQEPT  149 (649)
Q Consensus       115 ~~~~~~~a~Lld--sGNlVl~~~~~~~~~WqSFD~PT  149 (649)
                        ...+.+..++  .||++ +.. ...+.|.|=+.|+
T Consensus        82 --ptdt~L~~q~l~~~~~~-~~~-~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 --PTDTLLPGQKLGDGNVT-GKN-DSLTSWSSNTDPS  114 (114)
T ss_dssp             --SS-EEEEEET--TSEEE-EES-TSSEEEESS----
T ss_pred             --CccEEEeccCcccCCCc-ccc-ceEEeECCCCCCC
Confidence              2346677777  89999 653 3568899876663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.06  E-value=8.6e-05  Score=73.41  Aligned_cols=156  Identities=19%  Similarity=0.242  Sum_probs=100.5

Q ss_pred             CCHHHHHHHhcCcccce---eeccCCcEEEEEEEecCCcEEEEEEecccccc-------------------cHH-----H
Q 006347          471 FQFEELATATNNFQLSS---KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ-------------------GLE-----E  523 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~---~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~-------------------~~~-----~  523 (649)
                      .+.+.+....+...+.+   .|.+|.-+.||+|.-.++..+|||+.......                   ..+     -
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W  114 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW  114 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence            44555555555554444   45678889999999888999999987532111                   111     1


Q ss_pred             HHHHHHHHhcCC--CCCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 006347          524 FMNEVMVISKLQ--HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR  601 (649)
Q Consensus       524 f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  601 (649)
                      ..+|..-|.++.  +-.+.+-+++    .+..|||||+....+..-.   .+.-.+...+...+..++.+.+.-|-... 
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~---LkDv~~e~~e~~~~~~~~v~~~~~l~~~a-  186 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPAPR---LKDVPLELEEAEGLYEDVVEYMRRLYKEA-  186 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCCCC---cccCCcCchhHHHHHHHHHHHHHHHHHhc-
Confidence            234565566653  4455555554    2457999999654221111   11222333355667777888888887632 


Q ss_pred             CceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       602 ~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                       ++||+||..=|||+. ++.+.|+|||=|.....+
T Consensus       187 -~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         187 -GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             -CcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence             399999999999999 889999999998876533

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.05  E-value=3.3e-06  Score=96.89  Aligned_cols=110  Identities=27%  Similarity=0.446  Sum_probs=74.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .+|..++.+..|++|.||...++ ..+.+|+| +++..     -+.+.  ++.....|.+|                   
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~-----lilRn--ilt~a~npfvv-------------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN-----LILRN--ILTFAGNPFVV-------------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhc-ccccc-----hhhhc--cccccCCccee-------------------
Confidence            56788899999999999999887 45678884 43321     01110  22222333333                   


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                        |+-...+.. ....+.          +++.+++|||+.+   |+|||+||+|.||..=+++|+.||||.++.
T Consensus       136 --gDc~tllk~-~g~lPv----------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 --GDCATLLKN-IGPLPV----------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             --chhhhhccc-CCCCcc----------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhh
Confidence              343334422 111122          2278899999887   999999999999999999999999999864

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.93  E-value=5.3e-06  Score=83.88  Aligned_cols=94  Identities=28%  Similarity=0.333  Sum_probs=78.4

Q ss_pred             HhcCCCCCccceEEEEEeCC-----eEEEEEecCCCCChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 006347          531 ISKLQHRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRI  604 (649)
Q Consensus       531 l~~l~H~niv~l~g~~~~~~-----~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  604 (649)
                      |-.+-|.|||+++.|+.+..     +..++.|||+.|+|..+|++..+ ...+......+++.||..||.|||+. .++|
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi  199 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence            34456999999999987543     46799999999999999975322 34567777788999999999999986 5899


Q ss_pred             EecCCCCCcEEEcCCCceEEE
Q 006347          605 IHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       605 iHrDlkp~NILl~~~~~~Ki~  625 (649)
                      +|+++..+-|++..++-+||.
T Consensus       200 ihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             ccCCcchhheeecCCceEEec
Confidence            999999999999999988875

>PLN02876 acyl-CoA dehydrogenase

Probab=97.92  E-value=0.00013  Score=86.69  Aligned_cols=147  Identities=18%  Similarity=0.344  Sum_probs=92.2

Q ss_pred             ceeeccCCcEEEEEEEecCC---cEEEEEEecccc-cccHHHHHHHHHHHhcCC-CCCc--cceEEEEEeC---CeEEEE
Q 006347          486 SSKLGQGGFGPVYWGRLKDG---QEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ-HRNL--VRLLGCCVEG---EEKMLI  555 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g---~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV  555 (649)
                      .+.++.|.+..+|+....++   ..+++|+..... ......+.+|.+++..+. |.++  .+++++|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            46789999999999887653   367777764322 123457889999999995 6654  8888888764   357899


Q ss_pred             EecCCCCChhhh-----------------------hcCCC-C-------CCCCC--------HHHHHHH---------HH
Q 006347          556 YEYMPNRSLDAL-----------------------LFDPL-K-------KERLD--------WRKRFNI---------IE  587 (649)
Q Consensus       556 ~Ey~~~gsL~~~-----------------------l~~~~-~-------~~~l~--------~~~~~~i---------~~  587 (649)
                      |||+++..+.+-                       |+.-. .       ..+..        |...+.-         ..
T Consensus       123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~  202 (822)
T PLN02876        123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP  202 (822)
T ss_pred             EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence            999988653211                       11100 0       00111        1111100         01


Q ss_pred             HHHHHHHHHHhCC--------CCceEecCCCCCcEEEcC-C-CceEEEecCCcee
Q 006347          588 GISRGLLYLHRDS--------RLRIIHRDLKASNILLDE-E-LNPKISDFGMAKI  632 (649)
Q Consensus       588 ~ia~gL~yLH~~~--------~~~iiHrDlkp~NILl~~-~-~~~Ki~DFGla~~  632 (649)
                      .+.+.+.+|..+-        ++.+||+|+++.|||++. + ..+-|.|+.++.+
T Consensus       203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            2334456664421        235999999999999985 3 3367999998875

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.76  E-value=0.00021  Score=71.77  Aligned_cols=140  Identities=19%  Similarity=0.189  Sum_probs=78.2

Q ss_pred             eeeccCCcE-EEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCC---CccceEEEEEeCC---eEEEEEecC
Q 006347          487 SKLGQGGFG-PVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR---NLVRLLGCCVEGE---EKMLIYEYM  559 (649)
Q Consensus       487 ~~LG~G~fG-~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~---~~~lV~Ey~  559 (649)
                      +.++.|+.. .||+.    +..+.+|..+.  ......+..|.+++..+...   .+.++++.....+   ..+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            567777665 58875    23466775433  22345788999999887532   3455555443322   348899999


Q ss_pred             CCCChhhhh------------------cCCCCCC-C------------C-CHHHHH--HHH-------HHHHHHH-H-HH
Q 006347          560 PNRSLDALL------------------FDPLKKE-R------------L-DWRKRF--NII-------EGISRGL-L-YL  596 (649)
Q Consensus       560 ~~gsL~~~l------------------~~~~~~~-~------------l-~~~~~~--~i~-------~~ia~gL-~-yL  596 (649)
                      +|.++.+..                  +.-.... .            + .|....  .+.       .+....+ . ++
T Consensus        77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  156 (235)
T cd05155          77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL  156 (235)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence            987774321                  1100000 0            0 121110  000       0111111 1 11


Q ss_pred             Hh--CCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          597 HR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       597 H~--~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +.  .....++|+|+.+.|||++++....|+||+.|..
T Consensus       157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            11  1334589999999999999877678999998875

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=97.75  E-value=0.00054  Score=71.42  Aligned_cols=76  Identities=11%  Similarity=0.043  Sum_probs=57.2

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-C--CCccceEEEEEeC---CeEEEEEecC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H--RNLVRLLGCCVEG---EEKMLIYEYM  559 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~---~~~~lV~Ey~  559 (649)
                      .+.||.|..+.||+....+++ +.+|..+.  ......|..|.+.++.+. +  ..+.+++++|...   +..+||||++
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i   95 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERL   95 (297)
T ss_pred             eeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEecc
Confidence            468999999999998876564 55666422  113468899999999885 2  4688999988653   5689999999


Q ss_pred             CCCCh
Q 006347          560 PNRSL  564 (649)
Q Consensus       560 ~~gsL  564 (649)
                      +++++
T Consensus        96 ~G~~~  100 (297)
T PRK10593         96 RGVSV  100 (297)
T ss_pred             CCEec
Confidence            98765

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.74  E-value=0.00032  Score=67.82  Aligned_cols=125  Identities=25%  Similarity=0.402  Sum_probs=90.0

Q ss_pred             cCcccceeeccCCc-EEEEEEEecCCcEEEEEEecc---cc---------c---------ccHHHHHHHHHHHhcCC---
Q 006347          481 NNFQLSSKLGQGGF-GPVYWGRLKDGQEIAVKRLSK---AS---------G---------QGLEEFMNEVMVISKLQ---  535 (649)
Q Consensus       481 ~~f~~~~~LG~G~f-G~Vykg~~~~g~~vAVK~l~~---~~---------~---------~~~~~f~~E~~~l~~l~---  535 (649)
                      .+++..+.||.|.- |.|||+.+. |+.+|+|....   ..         .         ....-|..|.+..++|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            67888899999999 999999998 77999998321   00         0         11235889999888885   


Q ss_pred             CCCc--cceEEEEEeCC------------------eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 006347          536 HRNL--VRLLGCCVEGE------------------EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY  595 (649)
Q Consensus       536 H~ni--v~l~g~~~~~~------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~y  595 (649)
                      +.++  |+.+||..-..                  .+-||.||.+...            .+.-    +=+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~----~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI----RDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch----hHHHHHHHHHHH
Confidence            4566  99999974321                  1347777765432            1222    234566777888


Q ss_pred             HHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       596 LH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      +|..+   |+-+|++++|..     .-||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99877   999999999985     5689999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.66  E-value=0.00042  Score=67.46  Aligned_cols=134  Identities=19%  Similarity=0.248  Sum_probs=90.3

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccc----------------cccHHHHHHHHHHHhcCC------CCCccceE
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----------------GQGLEEFMNEVMVISKLQ------HRNLVRLL  543 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~----------------~~~~~~f~~E~~~l~~l~------H~niv~l~  543 (649)
                      ...||+|+.=.||.  +++.....||+.....                ....+++.+|+.-...+.      +..|.+++
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            35799999988884  4444556788776543                123466777776555544      88999999


Q ss_pred             EEEEeCCeEEEEEecCC------CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          544 GCCVEGEEKMLIYEYMP------NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       544 g~~~~~~~~~lV~Ey~~------~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      |+..++...-+|+|.+.      ..+|.+++.    ...++. ...+.+.   +-..||-+..   |+.+|++|.||++.
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~----~~~~~~-~~~~~L~---~f~~~l~~~~---Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK----EGGLTE-ELRQALD---EFKRYLLDHH---IVIRDLNPHNIVVQ  152 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHH----cCCccH-HHHHHHH---HHHHHHHHcC---CeecCCCcccEEEE
Confidence            99999999999999764      245777773    334555 3333333   4445666555   99999999999996


Q ss_pred             CCC----ceEEEe-cCCcee
Q 006347          618 EEL----NPKISD-FGMAKI  632 (649)
Q Consensus       618 ~~~----~~Ki~D-FGla~~  632 (649)
                      ...    .+.|+| ||-..+
T Consensus       153 ~~~~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  153 RRDSGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             ecCCCceEEEEEeCCCCccc
Confidence            432    466666 555443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.58  E-value=0.00091  Score=72.07  Aligned_cols=75  Identities=13%  Similarity=0.183  Sum_probs=55.1

Q ss_pred             eeeccCCcEEEEEEEecCC-cEEEEEEeccc-----c--cccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEEE
Q 006347          487 SKLGQGGFGPVYWGRLKDG-QEIAVKRLSKA-----S--GQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g-~~vAVK~l~~~-----~--~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV  555 (649)
                      +.||.|.+..||++...+| +.+.||.-...     .  +...+++..|.+.|..+.   -..+++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            6899999999999999877 48999974311     1  224567788888888763   2457777777  44567899


Q ss_pred             EecCCCCC
Q 006347          556 YEYMPNRS  563 (649)
Q Consensus       556 ~Ey~~~gs  563 (649)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998643

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=97.55  E-value=8.2e-05  Score=60.12  Aligned_cols=46  Identities=13%  Similarity=0.408  Sum_probs=34.2

Q ss_pred             ccccCCCCcc-ccCCCChhHHHHHhhccCCeEEEEecCCce-EEEeec
Q 006347          344 NKMKVPDFTE-WTSPATEDECREQCLKNCSCIAYAFDGGIG-CMVWRS  389 (649)
Q Consensus       344 ~~~~~p~~~~-~~~~~~~~~C~~~Cl~nCsC~a~~~~~g~g-C~~w~~  389 (649)
                      +++.++..+. .....+.++|+++|+.||+|.||.|..+.+ |+++..
T Consensus        10 ~~~~~~g~d~~~~~~~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~   57 (73)
T cd01100          10 SNVDFRGGDLSTVFASSAEQCQAACTADPGCLAFTYNTKSKKCFLKSS   57 (73)
T ss_pred             CCCccccCCcceeecCCHHHHHHHcCCCCCceEEEEECCCCeEEcccC
Confidence            3455555443 223568999999999999999999985444 999776

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.49  E-value=0.0016  Score=65.15  Aligned_cols=141  Identities=18%  Similarity=0.229  Sum_probs=82.0

Q ss_pred             eeeccCCcEEEEEEEecC--CcEEEEEEecccccccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCeEEEEEecCCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD--GQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~--g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      +.|..|-...+|+....+  +..+++|....... ....-.+|+.++..+.. .-.+++++...    ..+||||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            567778888999998764  67888887643221 11223468888888843 33445554432    248999999877


Q ss_pred             hhhh-------h----------cCCCCC--------CCCC-HHHHHHHHH----------------------HHHHHHHH
Q 006347          564 LDAL-------L----------FDPLKK--------ERLD-WRKRFNIIE----------------------GISRGLLY  595 (649)
Q Consensus       564 L~~~-------l----------~~~~~~--------~~l~-~~~~~~i~~----------------------~ia~gL~y  595 (649)
                      +...       +          +.....        .... |.....+..                      .+.+.+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            6322       1          111000        1111 222111111                      11111122


Q ss_pred             H----HhC-CCCceEecCCCCCcEEEcC-CCceEEEecCCcee
Q 006347          596 L----HRD-SRLRIIHRDLKASNILLDE-ELNPKISDFGMAKI  632 (649)
Q Consensus       596 L----H~~-~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~  632 (649)
                      |    ... ....++|+|+.+.|||+++ +..+.++||-.|..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            2    111 2346999999999999998 57899999998875

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.48  E-value=0.00088  Score=68.19  Aligned_cols=139  Identities=15%  Similarity=0.070  Sum_probs=79.6

Q ss_pred             eeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecCCCCChhh
Q 006347          488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYMPNRSLDA  566 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gsL~~  566 (649)
                      .+..|-...+|+... ++..+++|..........-...+|..++..+....+ .++++...    ..+||||+++..+..
T Consensus         3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence            355677788998874 466788887543322211235778888888854333 45554432    368999999877642


Q ss_pred             h-----------------hcCCC-CCCCCCHHHH-HHHHHH---------HHHHHHHHHhC-----CCCceEecCCCCCc
Q 006347          567 L-----------------LFDPL-KKERLDWRKR-FNIIEG---------ISRGLLYLHRD-----SRLRIIHRDLKASN  613 (649)
Q Consensus       567 ~-----------------l~~~~-~~~~l~~~~~-~~i~~~---------ia~gL~yLH~~-----~~~~iiHrDlkp~N  613 (649)
                      -                 |+... ...+++...+ .....+         +.+.+..+-..     .+..++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1                 11110 1112222211 111111         11112222211     13458999999999


Q ss_pred             EEEcCCCceEEEecCCcee
Q 006347          614 ILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       614 ILl~~~~~~Ki~DFGla~~  632 (649)
                      |++++++ ++|+||..|..
T Consensus       158 il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEEeCCC-CEEEeccccCc
Confidence            9999877 78999998875

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.45  E-value=0.00098  Score=62.62  Aligned_cols=129  Identities=22%  Similarity=0.311  Sum_probs=88.0

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCcc-ceEEEEEeCCeEEEEEecCCCCC
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV-RLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      ..+.|++|.+|.||+|.+. |.++|+|.-..+  .....+..|++++..++-.++- +++.+-    +-.+.|||+.+..
T Consensus        26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~   98 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcc
Confidence            3468999999999999988 568999976543  4567899999999998765543 444442    3345699999988


Q ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC-CCcEEEcCCCceEEEecCCceee
Q 006347          564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLK-ASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       564 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk-p~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |.+.-..      .+..+.+.++.. |-.   |-..   +|-|..|. |..++|..+..+.|+||--|++-
T Consensus        99 L~~~~~~------~~rk~l~~vlE~-a~~---LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          99 LGKLEIG------GDRKHLLRVLEK-AYK---LDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             hhhhhhc------ccHHHHHHHHHH-HHH---HHHh---ccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            8666421      133333333332 222   2222   37787775 55666666669999999999854

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.42  E-value=0.0011  Score=68.90  Aligned_cols=143  Identities=17%  Similarity=0.173  Sum_probs=87.7

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCC--CccceEEE------EEeCCeEEEEEe
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR--NLVRLLGC------CVEGEEKMLIYE  557 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~------~~~~~~~~lV~E  557 (649)
                      .+.|..|....+|+....+ ..+++|+...   ....+...|+.++..+++.  .+.+++..      ....+..++|+|
T Consensus        19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            3567778778999987654 4688887753   3345667788888877433  34555442      123445689999


Q ss_pred             cCCCCChhh----hh----------cCC----C----CCCCCCHHHHHH----------HHHHHHHHHHHHHh----CCC
Q 006347          558 YMPNRSLDA----LL----------FDP----L----KKERLDWRKRFN----------IIEGISRGLLYLHR----DSR  601 (649)
Q Consensus       558 y~~~gsL~~----~l----------~~~----~----~~~~l~~~~~~~----------i~~~ia~gL~yLH~----~~~  601 (649)
                      |++|..+..    ..          +..    .    ......|.....          ....+...+.++.+    .-.
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999877632    11          100    0    011123332210          11223344555543    123


Q ss_pred             CceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          602 LRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       602 ~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ..++|+|+.|.|||++++..+.|.||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4599999999999999988889999988764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.10  E-value=0.0041  Score=64.88  Aligned_cols=141  Identities=26%  Similarity=0.318  Sum_probs=84.5

Q ss_pred             eeeccCCcEEEEEEEecC-------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCC-ccceEEEEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKD-------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN-LVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.|..|-...+|+....+       ++.+++|...... .......+|.+++..+.... ..++++++..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            456666677899988765       4788888865432 23345567888887774322 3456666532    368999


Q ss_pred             CCCCChhhh-h----------------cCCCCCC------CC--CHHHHHH--------------------------HHH
Q 006347          559 MPNRSLDAL-L----------------FDPLKKE------RL--DWRKRFN--------------------------IIE  587 (649)
Q Consensus       559 ~~~gsL~~~-l----------------~~~~~~~------~l--~~~~~~~--------------------------i~~  587 (649)
                      ++|..+... +                +......      ..  -|.....                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            998776432 1                1110000      01  1111111                          111


Q ss_pred             HHHHHHHHHHh------CCCCceEecCCCCCcEEEcCC----CceEEEecCCcee
Q 006347          588 GISRGLLYLHR------DSRLRIIHRDLKASNILLDEE----LNPKISDFGMAKI  632 (649)
Q Consensus       588 ~ia~gL~yLH~------~~~~~iiHrDlkp~NILl~~~----~~~Ki~DFGla~~  632 (649)
                      .+.+-+.+|..      ..+..++|+|+.|.|||++++    ..++++||..|..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22233334432      245679999999999999985    8899999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.06  E-value=0.016  Score=61.01  Aligned_cols=142  Identities=15%  Similarity=0.163  Sum_probs=78.2

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCC--CCccceEE------EEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH--RNLVRLLG------CCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g------~~~~~~~~~lV~Ey  558 (649)
                      +.|..|....+|+....+| .+++|+.+.   ...+....|+.++..|..  -.+.+.+.      +....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            4566677778999887655 688887752   123344445555555532  22334442      11234567899999


Q ss_pred             CCCCChhh-----h------h---cCCC--------CCCCCCH-HHHHHH------------H-HHHHHHHHHHHhC---
Q 006347          559 MPNRSLDA-----L------L---FDPL--------KKERLDW-RKRFNI------------I-EGISRGLLYLHRD---  599 (649)
Q Consensus       559 ~~~gsL~~-----~------l---~~~~--------~~~~l~~-~~~~~i------------~-~~ia~gL~yLH~~---  599 (649)
                      ++|..+..     .      |   +...        ....+.| .....-            . ..+...+..+...   
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            99875421     1      1   1100        0111222 221111            1 1111222333211   


Q ss_pred             -CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          600 -SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       600 -~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                       -...++|+|+.|.|||++.+...-|+||+.+..
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence             234699999999999999776678999998853

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.93  E-value=0.017  Score=60.46  Aligned_cols=142  Identities=17%  Similarity=0.174  Sum_probs=82.4

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCC--CCccceEEEE------EeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH--RNLVRLLGCC------VEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~------~~~~~~~lV~Ey  558 (649)
                      +.++.|--..+|+....++ .+.+|.....  ....+...|++++..|..  -.+.+++...      ...+..++++||
T Consensus        28 ~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~  104 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTDVG-RYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF  104 (307)
T ss_pred             cccCCccccceEEEEeCCC-cEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence            4566676678998876545 5677876432  123455567777777642  2244544421      123456899999


Q ss_pred             CCCCChhhh--------------hcCCCC----C-----CCCCHHHHHH------------HHHHHHHHHHHHHh----C
Q 006347          559 MPNRSLDAL--------------LFDPLK----K-----ERLDWRKRFN------------IIEGISRGLLYLHR----D  599 (649)
Q Consensus       559 ~~~gsL~~~--------------l~~~~~----~-----~~l~~~~~~~------------i~~~ia~gL~yLH~----~  599 (649)
                      ++|..+...              ++....    .     ..-.|.....            ....+.+.++++..    .
T Consensus       105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~  184 (307)
T TIGR00938       105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD  184 (307)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence            988654210              111000    0     0112222111            11223445555543    2


Q ss_pred             CCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       600 ~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      ....++|+|+.+.||+++++....|+||+.+.
T Consensus       185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            23569999999999999998877999999885

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.81  E-value=0.01  Score=61.19  Aligned_cols=32  Identities=31%  Similarity=0.505  Sum_probs=26.9

Q ss_pred             CceEecCCCCCcEEEcCCCc-eEEEecCCceee
Q 006347          602 LRIIHRDLKASNILLDEELN-PKISDFGMAKIF  633 (649)
Q Consensus       602 ~~iiHrDlkp~NILl~~~~~-~Ki~DFGla~~~  633 (649)
                      ..++|+|++|.|||+++++. .-|.||+.|.+-
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            45899999999999998554 579999998863

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=96.75  E-value=0.018  Score=61.32  Aligned_cols=141  Identities=21%  Similarity=0.290  Sum_probs=81.2

Q ss_pred             eeeccCCcEEEEEEEecC-----CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecCC
Q 006347          487 SKLGQGGFGPVYWGRLKD-----GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-----g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      +.|-.|-.-.+|+....+     ++.+.+|........... -.+|..++..+...++ .++++.+..+    .|+||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence            345456677889887542     357888877544332222 2678888888753333 3566665332    5899998


Q ss_pred             CCChhhh-----------------hcCCC-C--CCCCCHHHHHHHHHH-----------------HHHHHHHH----Hh-
Q 006347          561 NRSLDAL-----------------LFDPL-K--KERLDWRKRFNIIEG-----------------ISRGLLYL----HR-  598 (649)
Q Consensus       561 ~gsL~~~-----------------l~~~~-~--~~~l~~~~~~~i~~~-----------------ia~gL~yL----H~-  598 (649)
                      +.+|..-                 ++... .  ....-|.+...+..+                 +...+..|    .. 
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            8777422                 11100 0  111113322222211                 11122222    21 


Q ss_pred             CCCCceEecCCCCCcEEEcC-CCceEEEecCCcee
Q 006347          599 DSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKI  632 (649)
Q Consensus       599 ~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~  632 (649)
                      .....++|+|+++.|||+++ +..++++||..|..
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            23346899999999999986 47899999998875

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.74  E-value=0.017  Score=59.63  Aligned_cols=73  Identities=18%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      .+.++.|....+|+.. .+++.+.||.-.   ......|..|.+-|+.|.   -..+++.+++....+..+||+||++.+
T Consensus        22 ~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            4678889999999988 557889999764   334467888888777773   456889999988888889999999876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.32  E-value=0.046  Score=57.93  Aligned_cols=72  Identities=15%  Similarity=0.187  Sum_probs=47.8

Q ss_pred             eeccCCcEEEEEEEecCC-cEEEEEEecc-------cccccHHHHHHHHHHHhcCC--CC-CccceEEEEEeCCeEEEEE
Q 006347          488 KLGQGGFGPVYWGRLKDG-QEIAVKRLSK-------ASGQGLEEFMNEVMVISKLQ--HR-NLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~~~g-~~vAVK~l~~-------~~~~~~~~f~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~lV~  556 (649)
                      +||.|-...||++..++| +.|+||.-..       .-+-...+...|.+.|....  -| .+++++.+  +.+...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            678899999999998754 5899996431       11233455667777776653  23 35555544  555667999


Q ss_pred             ecCCC
Q 006347          557 EYMPN  561 (649)
Q Consensus       557 Ey~~~  561 (649)
                      |+++.
T Consensus        80 EdL~~   84 (370)
T TIGR01767        80 EDLSH   84 (370)
T ss_pred             hhCcc
Confidence            99964

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.27  E-value=0.0078  Score=61.83  Aligned_cols=144  Identities=15%  Similarity=0.204  Sum_probs=95.7

Q ss_pred             CCCHHHHHHHhcC---cccceeeccCCcEEEEEEEecCCcEEEEEEecc-----------------ccc-----ccHHHH
Q 006347          470 LFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSK-----------------ASG-----QGLEEF  524 (649)
Q Consensus       470 ~~~~~~l~~~~~~---f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~-----------------~~~-----~~~~~f  524 (649)
                      -+.|..|+...++   +++.+.||-|.-+-||.+...+|++.++|.=.-                 ...     -..-..
T Consensus        78 GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa  157 (465)
T KOG2268|consen   78 GYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAA  157 (465)
T ss_pred             cchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHH
Confidence            3555555555443   567889999999999999999999999883110                 000     012234


Q ss_pred             HHHHHHHhcCC-CC-CccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 006347          525 MNEVMVISKLQ-HR-NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL  602 (649)
Q Consensus       525 ~~E~~~l~~l~-H~-niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~  602 (649)
                      .+|...|..|+ |- -+.+.+    +.+..++|||++.+-.|...-      ...+..+++.-   +..-+.-|..++  
T Consensus       158 ~kEfafmkaL~e~gfpVPkpi----D~~RH~Vvmelv~g~Pl~~v~------~v~d~~~ly~~---lm~~Iv~la~~G--  222 (465)
T KOG2268|consen  158 TKEFAFMKALYERGFPVPKPI----DHNRHCVVMELVDGYPLRQVR------HVEDPPTLYDD---LMGLIVRLANHG--  222 (465)
T ss_pred             HHHHHHHHHHHHcCCCCCCcc----cccceeeHHHhhcccceeeee------ecCChHHHHHH---HHHHHHHHHHcC--
Confidence            57888888884 32 233433    345678999999887774432      12334443333   333344555666  


Q ss_pred             ceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          603 RIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       603 ~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                       +||+|..-=||+++++..++++||-=
T Consensus       223 -lIHgDFNEFNimv~dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  223 -LIHGDFNEFNIMVKDDDKIVVIDFPQ  248 (465)
T ss_pred             -ceecccchheeEEecCCCEEEeechH
Confidence             99999999999999999999999953

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.16  E-value=0.00067  Score=78.59  Aligned_cols=150  Identities=17%  Similarity=0.175  Sum_probs=103.0

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecc---cccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      .....+.+.+-+..|.++.++...-. .|...++|....   ......+..+.+-.+....+||-+++...-+......+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            34456666777888999999877644 233333333221   11223334444444444455677776665566778899


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |+++|+.+++|...|+...   ..+..-....+..+.+.++|||...   ++|||++|.|+|...++..+++|||+.+..
T Consensus       881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence            9999999999988886432   3333333445666788999999865   899999999999999999999999966554

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.07  E-value=0.078  Score=55.38  Aligned_cols=129  Identities=17%  Similarity=0.293  Sum_probs=76.2

Q ss_pred             CcEEEEEEec-ccccccHHHHHHHHHHHhcCC--CCCccceEEEEEeCC--eEEEEEecCCCCChhhh------------
Q 006347          505 GQEIAVKRLS-KASGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGE--EKMLIYEYMPNRSLDAL------------  567 (649)
Q Consensus       505 g~~vAVK~l~-~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~--~~~lV~Ey~~~gsL~~~------------  567 (649)
                      ++++++++-. ...........+|..+|+.+.  -.-+.+.++.|.++.  ..+.||||.++..+.+.            
T Consensus        48 ~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~  127 (321)
T COG3173          48 GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFAL  127 (321)
T ss_pred             CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHH
Confidence            6777777221 112234455667777887774  344567778887776  56899999987332211            


Q ss_pred             ------hc---C----------C----CCCCCCCHHHHHHHH--------HHHHHHHHHHHhC-----CCCceEecCCCC
Q 006347          568 ------LF---D----------P----LKKERLDWRKRFNII--------EGISRGLLYLHRD-----SRLRIIHRDLKA  611 (649)
Q Consensus       568 ------l~---~----------~----~~~~~l~~~~~~~i~--------~~ia~gL~yLH~~-----~~~~iiHrDlkp  611 (649)
                            |.   .          .    ...+.-.|...++.+        -...+-..+|+++     +++.++|+|+.+
T Consensus       128 ~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~  207 (321)
T COG3173         128 DALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRP  207 (321)
T ss_pred             HHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCccc
Confidence                  11   0          0    000111222222111        1122334455443     335699999999


Q ss_pred             CcEEEcCCCceEEEecCCceee
Q 006347          612 SNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       612 ~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      .||+++.+.-.-|.||+++.+-
T Consensus       208 gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         208 GNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CCEEEeCCCeeEEEeccccccC
Confidence            9999999888999999999863

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.89  E-value=0.12  Score=55.70  Aligned_cols=73  Identities=11%  Similarity=0.091  Sum_probs=49.8

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEeccc----cc---ccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEEE
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA----SG---QGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~----~~---~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV  555 (649)
                      .+.||.|..-.||+.... +..++||+-...    ..   ....+-..|...|..+.   ...+.+++.++.  +...++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            468999999999998875 556889975411    11   13334444566665553   357888998877  446789


Q ss_pred             EecCCC
Q 006347          556 YEYMPN  561 (649)
Q Consensus       556 ~Ey~~~  561 (649)
                      |||+++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999976

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.78  E-value=0.0015  Score=72.08  Aligned_cols=136  Identities=18%  Similarity=0.129  Sum_probs=94.3

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCC-ccceEEEEEeCCeEEEEEecCCCC-
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN-LVRLLGCCVEGEEKMLIYEYMPNR-  562 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~Ey~~~g-  562 (649)
                      ....+++++.+.++|.+-...+....+.+...     ....-++++|.+++||| .++.++-+...+..+++++++..+ 
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r  320 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR  320 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence            34568899999999887553444445555332     45567899999999999 777777766677788999999876 


Q ss_pred             C-hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          563 S-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       563 s-L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      + .....   .....+...+...+.+.-.++++|||+..   -+|+|    ||+..+ ...|..||+.+..+...
T Consensus       321 s~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~  384 (829)
T KOG0576|consen  321 SSALEMT---VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRT  384 (829)
T ss_pred             cccccCC---hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCcc
Confidence            2 21111   11222334444456667788999999864   58998    777766 67899999998877543

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=95.69  E-value=0.11  Score=54.86  Aligned_cols=137  Identities=23%  Similarity=0.297  Sum_probs=81.3

Q ss_pred             CcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCC------ccceEEEEE--eC--CeEEEEEecCCCC
Q 006347          493 GFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN------LVRLLGCCV--EG--EEKMLIYEYMPNR  562 (649)
Q Consensus       493 ~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~--~~--~~~~lV~Ey~~~g  562 (649)
                      .--.+|+....+|.. ++|..+..  ....+...|+..+..+.-..      |..+=|-..  -.  ...+-++||++|.
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            445688888887776 77876543  45567777777777763111      222222211  12  3678899999998


Q ss_pred             Chhh-h----h--------------cCCC-----CCCCCCHHH-------------HHHHHHHHHHHHHHHHhC------
Q 006347          563 SLDA-L----L--------------FDPL-----KKERLDWRK-------------RFNIIEGISRGLLYLHRD------  599 (649)
Q Consensus       563 sL~~-~----l--------------~~~~-----~~~~l~~~~-------------~~~i~~~ia~gL~yLH~~------  599 (649)
                      .+.. .    +              .+..     ......|..             ......++...+..+.+.      
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            8872 1    1              0110     111233430             011233344445554432      


Q ss_pred             -CCCceEecCCCCCcEEEcCCCc-eEEEecCCcee
Q 006347          600 -SRLRIIHRDLKASNILLDEELN-PKISDFGMAKI  632 (649)
Q Consensus       600 -~~~~iiHrDlkp~NILl~~~~~-~Ki~DFGla~~  632 (649)
                       .+..+||+|+.|.||+++.+.. +.+.||+-+..
T Consensus       194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             cccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence             1122999999999999999885 99999998763

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.57  E-value=0.21  Score=52.05  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=25.8

Q ss_pred             CceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          602 LRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       602 ~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ..++|+|+.+.||+++. ..+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            46899999999999998 5789999997653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.45  E-value=0.11  Score=54.58  Aligned_cols=139  Identities=19%  Similarity=0.232  Sum_probs=91.9

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccc------c---cc-------------HHH----HHHHHHHHhcCCCCCcc
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS------G---QG-------------LEE----FMNEVMVISKLQHRNLV  540 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~------~---~~-------------~~~----f~~E~~~l~~l~H~niv  540 (649)
                      ..|..|.-+-||.++-.+|..+|||+.+...      .   .+             .+.    ...|++-|.+|+...|.
T Consensus       150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP  229 (520)
T KOG2270|consen  150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP  229 (520)
T ss_pred             cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            4678899999999999999999999765310      0   00             111    23466666666544433


Q ss_pred             ceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC
Q 006347          541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       541 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~  620 (649)
                      .---...  ....|||+|+..-.   +-.-..+...++...+..+-.++++-|.-|.+.|  ++||.||.-=|+|+.+ +
T Consensus       230 ~PePIlL--k~hVLVM~FlGrdg---w~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyhd-G  301 (520)
T KOG2270|consen  230 CPEPILL--KNHVLVMEFLGRDG---WAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYHD-G  301 (520)
T ss_pred             CCCceee--ecceEeeeeccCCC---CcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEEC-C
Confidence            2111111  12359999984321   1111123455777777788888889999998877  5999999999998865 5


Q ss_pred             ceEEEecCCceee
Q 006347          621 NPKISDFGMAKIF  633 (649)
Q Consensus       621 ~~Ki~DFGla~~~  633 (649)
                      .+.|+|.+=+...
T Consensus       302 ~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  302 KLYIIDVSQSVEH  314 (520)
T ss_pred             EEEEEEccccccC
Confidence            7889998766654

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.29  E-value=0.07  Score=57.26  Aligned_cols=74  Identities=11%  Similarity=0.103  Sum_probs=50.1

Q ss_pred             ceeeccCCcEEEEEEEecC-CcEEEEEEecc------cccccHHHHHHHHHHHhcCC--CC-CccceEEEEEeCCeEEEE
Q 006347          486 SSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK------ASGQGLEEFMNEVMVISKLQ--HR-NLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~------~~~~~~~~f~~E~~~l~~l~--H~-niv~l~g~~~~~~~~~lV  555 (649)
                      .+.||-|--.-||++...+ ++.|+||.-..      .-+-..++...|.+.|+...  -| .+++++.+  +.+...+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            3689999999999999853 56799985421      11234566777888777663  23 45556655  45556789


Q ss_pred             EecCCC
Q 006347          556 YEYMPN  561 (649)
Q Consensus       556 ~Ey~~~  561 (649)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            999864

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.18  E-value=0.31  Score=48.14  Aligned_cols=75  Identities=19%  Similarity=0.283  Sum_probs=53.0

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC---CCCCccceEEEEEeCCeEEEEEecCCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL---QHRNLVRLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      +++.-|.--..|.... +..++-||+-   .......|..|+.-|..+   +..++.+.+.+-.+.++.+||+||++-|.
T Consensus        22 ~~v~gG~inea~~v~d-g~~~~FvK~n---~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~   97 (286)
T COG3001          22 EEVSGGDINEAWRLRD-GTDPFFVKCN---QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGP   97 (286)
T ss_pred             cccCCccccceeEeec-CCcceEEEec---chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCC
Confidence            3455454444454433 3567888864   334567888888765555   45678899999999999999999999877


Q ss_pred             hh
Q 006347          564 LD  565 (649)
Q Consensus       564 L~  565 (649)
                      ++
T Consensus        98 ~d   99 (286)
T COG3001          98 LD   99 (286)
T ss_pred             CC
Confidence            75

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.13  E-value=0.27  Score=52.06  Aligned_cols=141  Identities=20%  Similarity=0.296  Sum_probs=79.2

Q ss_pred             eeeccCCcEEEEEEEecC----CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      +.|..|=.-.+|+....+    +..+.+|........ .-.-.+|..++..+...++ .++++++..+    +|.||+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcC
Confidence            455556667889887653    237888876543322 2223578888888864444 4666665322    58999987


Q ss_pred             CChhhh-------h----------cCCC-C--CCCCCHHHHHHHHHHH----------------------HHHHHHHHh-
Q 006347          562 RSLDAL-------L----------FDPL-K--KERLDWRKRFNIIEGI----------------------SRGLLYLHR-  598 (649)
Q Consensus       562 gsL~~~-------l----------~~~~-~--~~~l~~~~~~~i~~~i----------------------a~gL~yLH~-  598 (649)
                      ..|..-       +          +... .  ...--|....++..++                      .+-+..+.+ 
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            766321       1          1110 0  1111233322222111                      111222111 


Q ss_pred             ----CCCCceEecCCCCCcEEEcC-CCceEEEecCCcee
Q 006347          599 ----DSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKI  632 (649)
Q Consensus       599 ----~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~  632 (649)
                          .......|.|+-+.|||+++ +..++++||..|..
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence                12234789999999999975 57899999988875

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.93  E-value=0.084  Score=51.89  Aligned_cols=30  Identities=33%  Similarity=0.504  Sum_probs=21.7

Q ss_pred             ceEecCCCCCcEEE-cCCCceEEEecCCcee
Q 006347          603 RIIHRDLKASNILL-DEELNPKISDFGMAKI  632 (649)
Q Consensus       603 ~iiHrDlkp~NILl-~~~~~~Ki~DFGla~~  632 (649)
                      .+.|.|+.|.|||+ +.++.++++||-.|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            47899999999999 8899999999998875

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	649
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-36
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		7e-36
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		5e-29
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-28
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-26
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-26
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-26
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-25
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-18
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-18
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-17
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-17
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-17
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-17
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-17
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-17
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-17
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-17
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-17
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-17
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-17
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-17
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-17
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-17
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-17
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		8e-17
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		8e-17
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		9e-17
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-17
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-16
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-16
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-16
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-16
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-16
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-16
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-16
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-16
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-16
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-16
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-16
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-16
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-16
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-16
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-16
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-16
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-16
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-16
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-16
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-16
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-16
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		3e-16
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-16
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-16
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-16
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-16
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-16
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-16
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-16
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-16
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-16
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-16
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-16
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-16
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-16
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-16
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-16
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-16
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-16
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		6e-16
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		7e-16
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-16
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-16
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		9e-16
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-15
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-15
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-15
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-15
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-15
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-15
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-15
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		7e-15
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		9e-15
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-14
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-14
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-14
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-14
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-14
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-14
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-14
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-14
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-14
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-14
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-14
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-14
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-14
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-14
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-14
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-14
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		5e-14
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		6e-14
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-14
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-14
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		8e-14
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-13
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-13
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-13
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-13
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-13
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-13
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-13
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-13
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-13
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-13
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-13
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-13
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-13
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-13
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-13
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-13
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-13
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-13
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-13
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-13
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-13
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-13
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-13
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-13
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-13
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-13
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-13
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-13
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-13
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-13
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-13
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-13
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-13
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-13
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-13
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-13
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		4e-13
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		4e-13
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-13
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-13
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		5e-13
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-13
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-13
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-13
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-13
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-13
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		8e-13
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		8e-13
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-13
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-13
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		8e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-13
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		9e-13
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-13
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		9e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		9e-13
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-13
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-12
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-12
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-12
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-12
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-12
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-12
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-12
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-12
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-12
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-12
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-12
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-12
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-12
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-12
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-12
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-12
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		1e-12
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-12
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-12
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-12
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-12
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-12
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-12
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-12
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-12
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-12
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-12
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-12
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-12
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-12
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-12
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-12
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-12
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-12
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-12
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-12
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-12
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-12
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-12
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-12
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-12
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-12
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-12
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-12
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-12
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-12
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-12
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-12
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-12
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-12
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-12
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-12
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		2e-12
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-12
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-12
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-12
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-12
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		2e-12
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-12
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-12
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-12
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-12
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-12
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-12
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-12
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-12
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-12
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-12
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-12
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-12
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		3e-12
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-12
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-12
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-12
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-12
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-12
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-12
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-12
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		3e-12
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-12
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		4e-12
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-12
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		4e-12
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-12
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-12
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		4e-12
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		5e-12
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		5e-12
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		6e-12
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-12
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-12
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-12
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-12
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-12
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-12
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-12
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		6e-12
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-12
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-12
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		7e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		7e-12
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		7e-12
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		7e-12
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		8e-12
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-12
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		9e-12
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		9e-12
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		9e-12
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-12
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-12
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		9e-12
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-12
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		9e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		9e-12
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-11
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-11
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-11
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-11
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-11
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-11
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-11
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-11
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-11
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-11
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-11
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-11
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-11
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-11
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-11
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-11
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-11
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-11
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-11
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-11
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-11
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-11
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-11
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-11
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-11
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-11
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-11
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-11
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-11
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-11
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-11
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-11
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-11
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-11
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-11
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-11
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-11
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-11
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-11
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-11
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-11
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-11
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-11
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-11
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-11
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-11
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-11
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-11
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-11
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-11
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-11
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-11
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-11
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-11
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-11
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-11
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-11
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-11
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-11
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-11
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-11
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-11
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-11
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-11
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-11
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-11
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-11
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-11
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-11
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-11
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-11
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-11
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-11
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		5e-11
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		6e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-11
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		7e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-11
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-11
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		8e-11
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		8e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-10
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-10
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-10
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-10
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-10
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-10
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-10
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-10
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-10
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-10
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-10
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-10
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-10
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		3e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-10
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-10
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-10
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-10
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-10
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-10
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-10
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-10
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-10
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-10
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-10
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-10
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-10
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-10
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-10
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-10
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-10
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		5e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		6e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		6e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		6e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-10
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		7e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-10
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		8e-10
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		8e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		9e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		9e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-09
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-09
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-09
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-09
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-09
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-09
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-09
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-09
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-09
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-09
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-09
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-09
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-09
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-09
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		3e-09
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-09
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-09
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-09
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-09
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-09
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-09
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-09
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-09
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-09
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-09
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-09
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-09
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-09
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-09
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-09
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		6e-09
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		6e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-09
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-09
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		6e-09
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-09
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-09
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-09
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		7e-09
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		7e-09
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-09
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-09
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		7e-09
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-09
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		7e-09
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-09
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-09
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-09
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		8e-09
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		8e-09
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		9e-09
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		9e-09
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-08
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-08
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-08
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-08
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-08
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-08
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-08
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-08
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-08
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-08
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-08
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-08
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-08
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-08
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-08
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-08
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-08
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		1e-08
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-08
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-08
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-08
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-08
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-08
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-08
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-08
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-08
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-08
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-08
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-08
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-08
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-08
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-08
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-08
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-08
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-08
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		4e-08
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		4e-08
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		5e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-08
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-08
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-08
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		5e-08
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-08
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		5e-08
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-08
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		6e-08
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		6e-08
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-08
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-08
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-08
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		6e-08
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-08
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		6e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		7e-08
3soa_A	444	Full-Length Human Camkii Length = 444		7e-08
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		7e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		7e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		7e-08
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		7e-08
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-08
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		7e-08
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-08
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-08
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-08
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		8e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-08
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		8e-08
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		9e-08
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		9e-08
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		9e-08
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		9e-08
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		9e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		9e-08
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-07
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-07
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-07
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-07
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-07
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-07
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-07
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-07
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		2e-07
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-07
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		2e-07
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-07
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-07
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-07
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-07
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		4e-07
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-07
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		5e-07
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-07
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		5e-07
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		5e-07
4fl3_A	635	Structural And Biophysical Characterization Of The		5e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-07
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-07
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-07
4fl2_A	636	Structural And Biophysical Characterization Of The		5e-07
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		5e-07
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-07
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-07
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		6e-07
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-07
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		6e-07
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-07
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-07
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		6e-07
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		6e-07
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		7e-07
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		7e-07
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		7e-07
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		7e-07
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		7e-07
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		7e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		8e-07
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		8e-07
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-07
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		8e-07
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-07
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		8e-07
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		8e-07
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		8e-07
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		9e-07
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		9e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		9e-07
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		9e-07
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		9e-07
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		9e-07
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-06
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		1e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-06
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-06
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		2e-06
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-06
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-06
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		3e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-06
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-06
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		3e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-06
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-06
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		4e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		6e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		6e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		7e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		7e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		7e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		8e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		8e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		8e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		8e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		8e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		9e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		9e-06
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		9e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		9e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		9e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		9e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-05
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-05
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-05
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-05
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-05
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-05
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-05
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		3e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-05
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		5e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		5e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		5e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		5e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		5e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-05
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		5e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		5e-05
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		5e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		5e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		6e-05
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-05
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-05
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		6e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-05
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-05
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-05
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		7e-05
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		7e-05
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		7e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		8e-05
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		8e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		8e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-05
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		8e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		8e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		9e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		9e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		9e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		9e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-05
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		9e-05
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		9e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		1e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		1e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		1e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		1e-04
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-04
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		1e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-04
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		2e-04
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-04
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-04
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-04
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-04
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		5e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		5e-04
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		5e-04
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		5e-04
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  149 bits (375), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           V L  L  F   EL  A++NF   + LG+GGFG VY GRL DG  +AVKRL +   QG E
Sbjct: 20  VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 523 -EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWR 580
            +F  EV +IS   HRNL+RL G C+   E++L+Y YM N S+ + L + P  +  LDW 
Sbjct: 80  LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 139
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           KR  I  G +RGL YLH     +IIHRD+KA+NILLDEE    + DFG+AK+ 
Sbjct: 140 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 108/173 (62%), Gaps = 2/173 (1%)
Query: 463 VKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           V L  L  F   EL  A++NF   + LG+GGFG VY GRL DG  +AVKRL +   QG E
Sbjct: 12  VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE 71
Query: 523 -EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-PLKKERLDWR 580
            +F  EV +IS   HRNL+RL G C+   E++L+Y YM N S+ + L + P  +  LDW 
Sbjct: 72  LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP 131
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           KR  I  G +RGL YLH     +IIHRD+KA+NILLDEE    + DFG+AK+ 
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 455 LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS 514
           LS++ +   +   +PL   EE   ATNNF     +G G FG VY G L+DG ++A+KR +
Sbjct: 16  LSSSYLVPFESYRVPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT 72
Query: 515 KASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-DPLK 573
             S QG+EEF  E+  +S  +H +LV L+G C E  E +LIY+YM N +L   L+   L 
Sbjct: 73  PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              + W +R  I  G +RGL YLH  +   IIHRD+K+ NILLDE   PKI+DFG++K  
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK- 188
Query: 634 GGNQDQADTGRVV-GTL 649
           G   DQ     VV GTL
Sbjct: 189 GTELDQTHLXXVVKGTL 205

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 455 LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS 514
           LS++ +   +   +PL   EE   ATNNF     +G G FG VY G L+DG ++A+KR +
Sbjct: 16  LSSSYLVPFESYRVPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT 72
Query: 515 KASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-DPLK 573
             S QG+EEF  E+  +S  +H +LV L+G C E  E +LIY+YM N +L   L+   L 
Sbjct: 73  PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              + W +R  I  G +RGL YLH  +   IIHRD+K+ NILLDE   PKI+DFG++K
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
           F F EL   TNNF         +K+G+GGFG VY G + +   +AVK+L+       EE 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
              F  E+ V++K QH NLV LLG   +G++  L+Y YMPN SL   L        L W 
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            R  I +G + G+ +LH +     IHRD+K++NILLDE    KISDFG+A+         
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 641 DTGRVVGT 648
              R+VGT
Sbjct: 191 MXSRIVGT 198

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
           F F EL   TNNF         +K+G+GGFG VY G + +   +AVK+L+       EE 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
              F  E+ V++K QH NLV LLG   +G++  L+Y YMPN SL   L        L W 
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            R  I +G + G+ +LH +     IHRD+K++NILLDE    KISDFG+A+         
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 641 DTGRVVGT 648
              R+VGT
Sbjct: 185 MXXRIVGT 192

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
           F F EL   TNNF         +K+G+GGFG VY G + +   +AVK+L+       EE 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
              F  E+ V++K QH NLV LLG   +G++  L+Y YMPN SL   L        L W 
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            R  I +G + G+ +LH +     IHRD+K++NILLDE    KISDFG+A+         
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 641 DTGRVVGT 648
              R+VGT
Sbjct: 191 MXXRIVGT 198

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 471 FQFEELATATNNFQL------SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE- 523
           F F EL   TNNF         +K G+GGFG VY G + +   +AVK+L+       EE 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 524 ---FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
              F  E+ V +K QH NLV LLG   +G++  L+Y Y PN SL   L        L W 
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            R  I +G + G+ +LH +     IHRD+K++NILLDE    KISDFG+A+         
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 641 DTGRVVGT 648
              R+VGT
Sbjct: 182 XXSRIVGT 189

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNL 539
           +  +  K+G G FG V+      G ++AVK L +     + + EF+ EV ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V  +G   +     ++ EY+   SL  LL     +E+LD R+R ++   +++G+ YLH +
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
               I+HRDLK+ N+L+D++   K+ DFG++++
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNL 539
           +  +  K+G G FG V+      G ++AVK L +     + + EF+ EV ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V  +G   +     ++ EY+   SL  LL     +E+LD R+R ++   +++G+ YLH +
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
               I+HR+LK+ N+L+D++   K+ DFG++++
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 37  QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 91
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 92  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 149
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 150 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 6   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 6   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 5   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 59
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 60  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 117
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 118 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 4   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 58
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 59  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 116
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 117 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 11  QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 66  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 123
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 124 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 13  QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 67
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 68  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 125
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 126 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 12  QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 66
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 67  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 124
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 125 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 10  QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 65  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 123 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 9   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 6   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 118
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 119 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  +LG G FG V+ G   +  ++AVK L K     ++ F+ E  ++  LQH  LV
Sbjct: 13  ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           RL       E   +I EYM   SL D L  D   K  L   K  +    I+ G+ Y+ R 
Sbjct: 72  RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK 129
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL+A+N+L+ E L  KI+DFG+A++   N+  A  G
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 170

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEF 524
           + QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F
Sbjct: 22  MTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
             E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K 
Sbjct: 77  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 134
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                 I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEF 524
           + QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F
Sbjct: 22  MTQFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
             E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K 
Sbjct: 77  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDHIKL 134
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                 I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+ G   +  ++AVK L K     ++ F+ E  ++  LQH  LV
Sbjct: 12  ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---RLDWRKRFNIIEGISRGLLYLH 597
           RL     + E   +I E+M   SL     D LK +   ++   K  +    I+ G+ Y+ 
Sbjct: 71  RLYAVVTKEEPIYIITEFMAKGSL----LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R +    IHRDL+A+N+L+ E L  KI+DFG+A++   N+  A  G
Sbjct: 127 RKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 169

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 9   QFEE-----RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI E++P  SL   L     KER+D  K   
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 9   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L      ER+D  K   
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQ 121
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 122 YTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 7   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 65
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 66  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 123
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 124 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 65  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 8   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 66
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 67  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 124
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 125 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 65  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 15  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 73
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 74  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 131
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 132 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 90/174 (51%), Gaps = 17/174 (9%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGR---LKD--GQEIAVKRLSKASGQGLEEFMN 526
           QFEE      + +   +LG+G FG V   R   L+D  G+ +AVK+L  ++ + L +F  
Sbjct: 7   QFEE-----RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           E+ ++  LQH N+V+  G C     +   LI EY+P  SL   L     KER+D  K   
Sbjct: 62  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQ 119
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
               I +G+ YL      R IHR+L   NIL++ E   KI DFG+ K+   +++
Sbjct: 120 YTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 14  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 72
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 73  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 130
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 131 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 6   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 64
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 65  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 122
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 123 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 70
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 71  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 128
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 19/167 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
           +N  L  +LG+G FG V+          +D   +AVK L  AS    ++F  E  +++ L
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD----------ALLFDPLKKERLDWRKRFN 584
           QH ++V+  G CVEG+  ++++EYM +  L+           L+ +      L   +  +
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           I + I+ G++YL   +    +HRDL   N L+ E L  KI DFGM++
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 12  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 70
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 71  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 128
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 129 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 11  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 69
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 70  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 127
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 128 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 1   DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 59
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 60  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 117
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 118 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +E        +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +
Sbjct: 16  DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQ 74
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQH+ LVRL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+
Sbjct: 75  LQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGM 132
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++   +    IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 133 AFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG+A++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 8   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 67  QLYAVVSE-EPIXIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 122 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 19/188 (10%)
Query: 471 FQFEELATATNNF---------QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA- 516
           F FE+   A   F         ++   +G G FG V  GRLK  G+    +A+K L    
Sbjct: 10  FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
           + +   +F++E  ++ +  H N++ L G   + +  M+I EYM N SLDA L       R
Sbjct: 70  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGR 127
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
               +   ++ GI  G+ YL   S +  +HRDL A NIL++  L  K+SDFGM+++   +
Sbjct: 128 FTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 637 QDQADTGR 644
            + A T R
Sbjct: 185 PEAAYTTR 192

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV+
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLHR 598
           L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ R
Sbjct: 327 LYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 382 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 7   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 66  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 121
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 122 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 163

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 11  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 70  QLYAVVSE-EPIYIVTEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 125 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 167

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKL 534
            +   +   +G G  G V +GRL+  GQ    +A+K L    + +   +F++E  ++ + 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N++RL G    G   M++ EYM N SLD  L       +    +   ++ G+  G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMR 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           YL   S L  +HRDL A N+L+D  L  K+SDFG++++   + D A T
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 9   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 68  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 123
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 124 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 165

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 6   VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 65  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 23  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 82  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 139
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 140 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 243 QLYAVVSE-EPIYIVGEYMSKGSL----LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 33  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 92  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 149
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 150 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKL 534
            +   +   +G G  G V +GRL+  GQ    +A+K L    + +   +F++E  ++ + 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N++RL G    G   M++ EYM N SLD  L       +    +   ++ G+  G+ 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIMQLVGMLRGVGAGMR 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           YL   S L  +HRDL A N+L+D  L  K+SDFG++++   + D A T
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 74  QLYAVVSE-EPIYIVTEYMNKGSL----LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 171

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
             +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +LQH+ LVR
Sbjct: 10  TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 68
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           L     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+ ++   + 
Sbjct: 69  LYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN- 125
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              IHR+L+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 126 --YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV+
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R   
Sbjct: 245 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER--- 299
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +  +HRDL+A+NIL+ E L  K++DFG+ ++   N+  A  G
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG 341

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ EYM N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG+ ++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ K++H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L   + K  L   +  ++   I+ G+ Y+ R  
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM        L D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 77  QLYAVVSE-EPIYIVMEYMSK----GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM        L D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSK----GCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE---GISRGLLYLH 597
           +L     E E   ++ EYM   SL     D LK E   + +   +++    I+ G+ Y+ 
Sbjct: 74  QLYAVVSE-EPIYIVTEYMNKGSL----LDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R   +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 129 R---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
            ++   +G G FG V  GRLK  G+    +A+K L    + +   +F++E  ++ +  H 
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N++ L G   + +  M+I EYM N SLDA L       R    +   ++ GI  G+ YL 
Sbjct: 76  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL- 132
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
             S +  +HRDL A NIL++  L  K+SDFGM+++   + + A T R
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 10/167 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
            ++   +G G FG V  GRLK  G+    +A+K L    + +   +F++E  ++ +  H 
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N++ L G   + +  M+I EYM N SLDA L       R    +   ++ GI  G+ YL 
Sbjct: 70  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK--NDGRFTVIQLVGMLRGIGSGMKYL- 126
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
             S +  +HRDL A NIL++  L  K+SDFGM+++   + + A T R
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQ----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + +G+     +A+K L++ +G     EFM+E ++++ + H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           LG C+    + L+ + MP+  L   + +   K+ +  +   N    I++G++YL      
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           R++HRDL A N+L+    + KI+DFG+A++  G++ +  AD G++
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQ----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + +G+     +A+K L++ +G     EFM+E ++++ + H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           LG C+    + L+ + MP+  L   + +   K+ +  +   N    I++G++YL      
Sbjct: 83  LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           R++HRDL A N+L+    + KI+DFG+A++  G++ +  AD G++
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 6   VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ E M N SLD+ L       +    +   
Sbjct: 65  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 122
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 32  TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 90
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       ++ EYMP  +L   L +   +E +       +   IS  + YL + 
Sbjct: 91  VQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE-CNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 150 N---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG 190

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ E M N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASG---QGLEEF 524
           + +F +   ATN   +   +G G FG V  GRLK    +EI+V   +   G   +   +F
Sbjct: 35  VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           + E  ++ +  H N++RL G   + +  M++ E M N SLD+ L       +    +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVG 151
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++ GI+ G+ YL   S +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 152 MLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L  +LG G  G V+ G      ++AVK L + S    + F+ E  ++ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           RL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+ ++   +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
               IHRDL+A+NIL+ + L+ KI+DFG+A++    +  A  G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 489 LGQGGFGPVYWGRLKDGQ-----EIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRL 542
           +G G FG VY G LK         +A+K L     +    +F+ E  ++ +  H N++RL
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
            G   + +  M+I EYM N +LD  L +  K       +   ++ GI+ G+ YL   + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIF 633
             +HRDL A NIL++  L  K+SDFG++++ 
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 489 LGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G FG V  GRLK  G+    +A+K L    + +   +F+ E  ++ +  H N++ L 
Sbjct: 30  IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLLYLHRDSR 601
           G   + +  M++ EYM N SLD  L    KK   +    +   ++ GIS G+ YL   S 
Sbjct: 90  GVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGMLRGISAGMKYL---SD 142
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           +  +HRDL A NIL++  L  K+SDFG++++   + + A T R
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +LG+G FG V+          +D   +AVK L +AS    ++F  E  +++ LQH+++VR
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
             G C EG   ++++EYM +  L         DA L    + +    L   +   +   +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + G++YL   + L  +HRDL   N L+ + L  KI DFGM++
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG VY+ R +++ + +A+K++S   K S +  ++ + EV  + KL+H N ++  
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           GC +      L+ EY    + D L    + K+ L   +   +  G  +GL YLH  +   
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +IHRD+KA NILL E    K+ DFG A I  
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           ++G G FG VY+ R +++ + +A+K++S   K S +  ++ + EV  + KL+H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           GC +      L+ EY    + D L    + K+ L   +   +  G  +GL YLH  +   
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +IHRD+KA NILL E    K+ DFG A I  
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+        ++AVK + K     +E F+ E  V+  LQH  LV
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +L    V  E   +I E+M   SL D L  D   K+ L   K  +    I+ G+ ++ + 
Sbjct: 74  KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL+A+NIL+   L  KI+DFG+A++   N+  A  G
Sbjct: 131 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 171

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
           N+Q+   LG+G FG V        GQ++A+K      L+K+  QG  E   E+  +  L+
Sbjct: 15  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++++L       +E +++ EY  N   D ++    +++++  ++     + I   + Y
Sbjct: 73  HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 128
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            HR    +I+HRDLK  N+LLDE LN KI+DFG++ I 
Sbjct: 129 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
           N+Q+   LG+G FG V        GQ++A+K      L+K+  QG  E   E+  +  L+
Sbjct: 14  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++++L       +E +++ EY  N   D ++    +++++  ++     + I   + Y
Sbjct: 72  HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 127
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            HR    +I+HRDLK  N+LLDE LN KI+DFG++ I 
Sbjct: 128 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +LG+G FG V+          +D   +AVK L +AS    ++F  E  +++ LQH+++VR
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
             G C EG   ++++EYM +  L         DA L    + +    L   +   +   +
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + G++YL   + L  +HRDL   N L+ + L  KI DFGM++
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 488 KLGQGGFGPVYWGRL------KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +LG+G FG V+          +D   +AVK L +AS    ++F  E  +++ LQH+++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 542 LLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLKKERLDWRKRFNIIEGI 589
             G C EG   ++++EYM +  L         DA L    + +    L   +   +   +
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + G++YL   + L  +HRDL   N L+ + L  KI DFGM++
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRN 538
           ++   +G G FG V  GRLK  G++   +A+K L    + +   EF++E  ++ + +H N
Sbjct: 19  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++RL G        M++ E+M N +LD+ L   L   +    +   ++ GI+ G+ YL  
Sbjct: 79  IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYL-- 134
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN-QDQADTGRVVGTL 649
            + +  +HRDL A NIL++  L  K+SDFG+++    N  D  +T  + G +
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
           N+Q+   LG+G FG V        GQ++A+K      L+K+  QG  E   E+  +  L+
Sbjct: 9   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++++L       +E +++ EY  N   D ++    +++++  ++     + I   + Y
Sbjct: 67  HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 122
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            HR    +I+HRDLK  N+LLDE LN KI+DFG++ I 
Sbjct: 123 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 482 NFQLSSKLGQGGFGPVYWG-RLKDGQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQ 535
           N+Q+   LG+G FG V        GQ++A+K      L+K+  QG  E   E+  +  L+
Sbjct: 5   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++++L       +E +++ EY  N   D ++    +++++  ++     + I   + Y
Sbjct: 63  HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEY 118
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            HR    +I+HRDLK  N+LLDE LN KI+DFG++ I 
Sbjct: 119 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + QL  +LG G FG V+ G      ++A+K L K      E F+ E  ++ KL+H  LV+
Sbjct: 10  SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           L     E E   ++ EYM   SL   L D  +   L      ++   ++ G+ Y+ R   
Sbjct: 69  LYAVVSE-EPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIER--- 123
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +  IHRDL+++NIL+   L  KI+DFG+A++   N+  A  G
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+        ++AVK + K     +E F+ E  V+  LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +L    V  E   +I E+M   SL D L  D   K+ L   K  +    I+ G+ ++ + 
Sbjct: 247 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 303
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL+A+NIL+   L  KI+DFG+A++   N+  A  G
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV+L G C+
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L++E+M +  L     D L+ +R          +   +  G+ YL   S   +I
Sbjct: 73  EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 489 LGQGGFGPVYWGRL-----KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V   R        G+++AVK L   SG   + +   E+ ++  L H N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 543 LGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            G C E  G    LI E++P+ SL   L  P  K +++ +++      I +G+ YL   S
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 144
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           R + +HRDL A N+L++ E   KI DFG+ K
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTK 174

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHRN 538
           ++   +G G FG V  GRLK  G++   +A+K L    + +   EF++E  ++ + +H N
Sbjct: 17  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++RL G        M++ E+M N +LD+ L   L   +    +   ++ GI+ G+ YL  
Sbjct: 77  IIRLEGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTVIQLVGMLRGIASGMRYL-- 132
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
            + +  +HRDL A NIL++  L  K+SDFG+++    N
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 489 LGQGGFGPVYWGRL-----KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V   R        G+++AVK L   SG   + +   E+ ++  L H N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 543 LGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            G C E  G    LI E++P+ SL   L  P  K +++ +++      I +G+ YL   S
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL--GS 132
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           R + +HRDL A N+L++ E   KI DFG+ K
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTK 162

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
           A N  +   ++G+GGFG V+ GRL KD   +A+K L     +G        +EF  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +S L H N+V+L G         ++ E++P   L   L D  K   + W  +  ++  I+
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
            G+ Y+ ++    I+HRDL++ NI L   +E  P   K++DFG+++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G FG VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 11  TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 70  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 18  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 176

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 469 PLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNE 527
           P   +++      +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E
Sbjct: 2   PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKE 60
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             V+ +++H NLV+LLG C       +I E+M   +L   L +   ++ ++      +  
Sbjct: 61  AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMAT 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            IS  + YL + +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 120 QISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 172

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 18  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 77  VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 18  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 75
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 135 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 175

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 11  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 70  VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG 169

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 16  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L     + + + +K  +I    +RG+ YLH  S   I
Sbjct: 76  YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+   KI DFG+A +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATV 157

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 18  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 77  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV 158

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 72  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV 153

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
           A N  +   ++G+GGFG V+ GRL KD   +A+K L     +G        +EF  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +S L H N+V+L G         ++ E++P   L   L D  K   + W  +  ++  I+
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
            G+ Y+ ++    I+HRDL++ NI L   +E  P   K++DFG ++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                 +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 72  YST-APQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV 153

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 15  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV+L G C+
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L++E+M +  L     D L+ +R          +   +  G+ YL       +I
Sbjct: 73  EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV+L G C+
Sbjct: 12  EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L++E+M +  L     D L+ +R          +   +  G+ YL       +I
Sbjct: 71  EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 77  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV 158

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 14  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 72
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 73  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 132 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 172

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 15  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV+L G C+
Sbjct: 17  EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L++E+M +  L     D L+ +R          +   +  G+ YL       +I
Sbjct: 76  EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 26  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 84
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 85  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 144 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 184

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 14  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 74  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV 155

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 15  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + 
Sbjct: 74  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 133 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 10/166 (6%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LS+++G G FG VY G+      + + ++   + +  + F NEV V+ K +H N++  +G
Sbjct: 40  LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ ++    SL   L   +++ +    +  +I    ++G+ YLH  +   I
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI----FGGNQDQADTGRVV 646
           IHRD+K++NI L E L  KI DFG+A +     G  Q +  TG V+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 18  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 76
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 77  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 136 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 176

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 72  VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 131 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                 +  ++ ++    SL   L     + + + +K  +I    +RG+ YLH  S   I
Sbjct: 88  YST-APQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK++NI L E+   KI DFG+A
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + + S    ++F+ E  V+ KL H  LV+L G C+
Sbjct: 34  EIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L++E+M +  L     D L+ +R          +   +  G+ YL       +I
Sbjct: 93  EQAPICLVFEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 39  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 99  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATV 180

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L     + + + +K  +I    +RG+ YLH  S   I
Sbjct: 88  YSTK-PQLAIVTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK++NI L E+   KI DFG+A
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKI 632
           IHRDLK++NI L E+L  KI DFG+A +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATV 181

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 72  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK++NI L E+L  KI DFG+A
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 485 LSSKLGQGGFGPVYWGR------LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           L  +LG+G FG V+          KD   +AVK L   +    ++F  E  +++ LQH +
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSL---------DALLF---DPLK-KERLDWRKRFNI 585
           +V+  G C +G+  ++++EYM +  L         DA++     P + K  L   +  +I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              I+ G++YL   +    +HRDL   N L+   L  KI DFGM++
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 11  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 69
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + 
Sbjct: 70  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +    IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 129 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG 169

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 90  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    +++ +  G
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+        ++AVK + K     +E F+ E  V+  LQH  LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +L    V  E   +I E+M   SL D L  D   K+ L   K  +    I+ G+ ++ + 
Sbjct: 241 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR 297
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           +    IHRDL+A+NIL+   L  KI+DFG+A++
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARV 327

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
Query: 459 NVNTVKLQDLPLFQFEEL------ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVK 511
           ++ TV+L++ P  Q ++L            F +  KLG+G +G VY    K+ GQ +A+K
Sbjct: 1   SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
           ++   S   L+E + E+ ++ +    ++V+  G   +  +  ++ EY    S+  ++   
Sbjct: 61  QVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR-- 116
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L+ + L   +   I++   +GL YLH    +R IHRD+KA NILL+ E + K++DFG+A
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA 172

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLS-KASGQGLEEF 524
           + +E++ +   F    +LG+  FG VY G L      +  Q +A+K L  KA G   EEF
Sbjct: 2   KLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DP 571
            +E M+ ++LQH N+V LLG   + +   +I+ Y  +  L   L              D 
Sbjct: 60  RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
             K  L+     +++  I+ G+ YL   S   ++H+DL   N+L+ ++LN KISD G+
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQG-------LEEFMNEVMV 530
           A N  +   ++G+GGFG V+ GRL KD   +A+K L     +G        +EF  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +S L H N+V+L G         ++ E++P   L   L D  K   + W  +  ++  I+
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD--EELNP---KISDFGMAK 631
            G+ Y+ ++    I+HRDL++ NI L   +E  P   K++DF +++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLS-KASGQGLEEF 524
           + +E++ +   F    +LG+  FG VY G L      +  Q +A+K L  KA G   EEF
Sbjct: 19  KLKEISLSAVRFM--EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DP 571
            +E M+ ++LQH N+V LLG   + +   +I+ Y  +  L   L              D 
Sbjct: 77  RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM 629
             K  L+     +++  I+ G+ YL   S   ++H+DL   N+L+ ++LN KISD G+
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 32  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 92  YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK++NI L E+L  KI DFG+A
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLA 171

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+A+K + K   +   L++   EV ++  L H N
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   LI EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 76  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFR---QIVSAVQYCH 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF--GGNQD 638
           +    RI+HRDLKA N+LLD ++N KI+DFG +  F  GG  D
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++  +G
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              +  +  ++ ++    SL   L   + + + +  K  +I    ++G+ YLH  S   I
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK++NI L E+L  KI DFG+A
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+A+K + K   +   L++   EV ++  L H N
Sbjct: 13  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   LI EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 73  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFR---QIVSAVQYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF--GGNQD 638
           +    RI+HRDLKA N+LLD ++N KI+DFG +  F  GG  D
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQ--EIAVK--RLSKASGQGLEEFM 525
           + E++    N   L   LG+G FG V  G LK  DG   ++AVK  +L  +S + +EEF+
Sbjct: 25  KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEK-----MLIYEYMPNRSLDA-LLFDPLKK--ERL 577
           +E   +    H N++RLLG C+E   +     M+I  +M    L   LL+  L+   + +
Sbjct: 85  SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGGN 636
             +     +  I+ G+ YL   S    +HRDL A N +L +++   ++DFG++ KI+ G 
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG- 200
Query: 637 QDQADTGRV 645
            D    GR+
Sbjct: 201 -DYYRQGRI 208

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV+L G C+
Sbjct: 15  EIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDSRLRII 605
           E     L+ E+M +  L     D L+ +R          +   +  G+ YL       +I
Sbjct: 74  EQAPICLVTEFMEHGCLS----DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           HRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            ++F+  + LGQG FG V   R   D +  A+K++ + + + L   ++EVM+++ L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
           +VR                 V+ +  + I  EY  NR+L D +  + L ++R + WR   
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            I+E +S    Y+H      IIHRDLK  NI +DE  N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE- 522
           +F  +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      
Sbjct: 5   VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
           EF+NE  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +    
Sbjct: 65  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVL 123
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 471 FQFEELATATNNF---------QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRL-SKA 516
           F FE+   A   F         ++   +G G FG V  G LK  G+    +A+K L S  
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
           + +   +F++E  ++ +  H N++ L G   +    M+I E+M N SLD+ L       +
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQ 131
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
               +   ++ GI+ G+ YL   + +  +HRDL A NIL++  L  K+SDFG+++  
Sbjct: 132 FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRLSKA-SGQGLEEFMNEVMVISKLQHR 537
            ++   +G G FG V  GRLK  G+    +A+K L    + +   +F+ E  ++ +  H 
Sbjct: 45  IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V L G    G+  M++ E+M N +LDA L       +    +   ++ GI+ G+ YL 
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK--HDGQFTVIQLVGMLRGIAAGMRYL- 161
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
             + +  +HRDL A NIL++  L  K+SDFG++++ 
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL + +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
               IHR+L A N L+ E    K++DFG++++  G+   A  G
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 488 KLGQGGFGPVYWG--RLKDGQ-EIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +LG G FG V  G  R++  Q ++A+K L + + +   EE M E  ++ +L +  +VRL+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C + E  ML+ E      L   L    K+E +       ++  +S G+ YL   +   
Sbjct: 77  GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            +HRDL A N+LL      KISDFG++K  G + D   T R  G
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAG 173

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +LLG C       +I E+M   +L   L +   ++ ++      +   IS  + YL + +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
               IHR+L A N L+ E    K++DFG++++  G+   A  G
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+K DG   + A+KR+ + AS     +F  E+ V+ KL  
Sbjct: 15  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
           H N++ LLG C       L  EY P+ +L     D L+K R                 L 
Sbjct: 75  HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++  +    ++RG+ YL   S+ + IHRDL A NIL+ E    KI+DFG+++
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+K DG   + A+KR+ + AS     +F  E+ V+ KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
           H N++ LLG C       L  EY P+ +L     D L+K R                 L 
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++  +    ++RG+ YL   S+ + IHRDL A NIL+ E    KI+DFG+++
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 83  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 90  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 70  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 15  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 74  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
            +VN        ++  +E   A     +S +LGQG FG VY G     +KD  E  +A+K
Sbjct: 2   ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RS 563
            +++A+      EF+NE  V+ +    ++VRLLG   +G+  ++I E M         RS
Sbjct: 62  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
           L   + +          K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   K
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 624 ISDFGMAK 631
           I DFGM +
Sbjct: 179 IGDFGMTR 186

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 22  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 81  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 12  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 72  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 12  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 72  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 130
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 131 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 170
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLAR 199

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 16  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 75  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 171
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLAR 200

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 152
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 152
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 11  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 71  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPS 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRN 538
            +  L  ++G+G FG V+ GRL+ D   +AVK   +     L+ +F+ E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +VRL+G C + +   ++ E +  +  D L F   +  RL  +    ++   + G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 IHRDL A N L+ E+   KISDFGM++
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 17/172 (9%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 8   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDW 579
           E  V+ +    ++VRLLG   +G+  ++I E M         RSL   + +         
Sbjct: 68  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 90  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 144
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLAR 173

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
            +VN        ++  +E   A     +S +LGQG FG VY G     +KD  E  +A+K
Sbjct: 2   ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
            +++A+      EF+NE  V+ +    ++VRLLG   +G+  ++I E M    L + L  
Sbjct: 62  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 571 PLKKERLD--------WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP 622
            L+ E  +          K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   
Sbjct: 122 -LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177
Query: 623 KISDFGMAK 631
           KI DFGM +
Sbjct: 178 KIGDFGMTR 186

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 458 TNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVK 511
            +VN        ++  +E   A     +S +LGQG FG VY G     +KD  E  +A+K
Sbjct: 24  ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 83
Query: 512 RLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD 570
            +++A+      EF+NE  V+ +    ++VRLLG   +G+  ++I E M    L + L  
Sbjct: 84  TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-R 142
Query: 571 PLKKERLD--------WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP 622
            L+ E  +          K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   
Sbjct: 143 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 199
Query: 623 KISDFGMAK 631
           KI DFGM +
Sbjct: 200 KIGDFGMTR 208

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRN 538
            +  L  ++G+G FG V+ GRL+ D   +AVK   +     L+ +F+ E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +VRL+G C + +   ++ E +  +  D L F   +  RL  +    ++   + G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 IHRDL A N L+ E+   KISDFGM++
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 11  DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 71  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 150
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLAR 179

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 95  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 149
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLAR 178

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 5   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 65  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 123
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           G C+  E   +++  YM +  L   + +      +     F +   +++G+ YL   +  
Sbjct: 93  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL---ASK 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAK 631
           + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLAR 176

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGISRGL 593
           +H N++RL G   +     LI EY P       ++  L+K  + D ++    I  ++  L
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPR----GEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV+L G C 
Sbjct: 16  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           +     +I EYM N  L   L +   + R   ++   + + +   + YL      + +HR
Sbjct: 75  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           DL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 3   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 63  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPS 121
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 76  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 133 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 488 KLGQGGFGPVYWG--RLKDGQ-EIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +LG G FG V  G  R++  Q ++A+K L + + +   EE M E  ++ +L +  +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C + E  ML+ E      L   L    K+E +       ++  +S G+ YL   +   
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            +HR+L A N+LL      KISDFG++K  G + D   T R  G
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAG 499

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 16  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 76  DNPHVCRLLGICLTSTVQ-LIMQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 132
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 133 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 77  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 63  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-ERLDWRKRFNIIEGISRGL 593
           +H N++RL G   +     LI EY P       ++  L+K  + D ++    I  ++  L
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPR----GEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 79  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 78  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 69  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 126 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 21  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 81  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 137
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 138 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 82  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LITQLMPFGXL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 77  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 40  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 157 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
            + ++  +K+GQG FG V+  R  K GQ++A+K+ L +   +G     + E+ ++  L+H
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            N+V L+  C               L++++     L  LL + L K  L   KR  +++ 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +  GL Y+HR+   +I+HRD+KA+N+L+  +   K++DFG+A+ F 
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 78  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 78  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K+ + I A+K L KA  +  G+E +   EV + S L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     ++IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 208
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 18  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 78  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 134
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 135 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 25  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 85  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 141
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 142 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           L  +LG G FG V  G+ K   ++AVK + + S    +EF  E   + KL H  LV+  G
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
            C +     ++ EY+ N  L   L    K   L+  +   +   +  G+ +L      + 
Sbjct: 71  VCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QF 125
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           IHRDL A N L+D +L  K+SDFGM +    +Q  +  G
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--VMVISKLQHRN 538
           +N +L   +G+G +G VY G L D + +AVK  S A+ Q    F+NE  +  +  ++H N
Sbjct: 13  DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 539 LVRLL----GCCVEGE-EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           + R +        +G  E +L+ EY PN SL   L         DW     +   ++RGL
Sbjct: 69  IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGL 124
Query: 594 LYLHRD------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            YLH +       +  I HRDL + N+L+  +    ISDFG++    GN+
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 154
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG-GNQDQADTG 643
           +     I+HRDLKA N+LLD ++N KI+DFG +  F  GN+  A  G
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG 174

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 150
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +     I+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 19/153 (12%)
Query: 489 LGQGGFGPVYWGRL--KDGQEI--AVKRLSKASGQG-LEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G L   DG++I  AVK L++ +  G + +F+ E +++    H N++ LL
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 544 GCCVEGE-EKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           G C+  E   +++  YM +  L   +     +P  K+ + +  +      +++G+ +L  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ------VAKGMKFL-- 147
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +     I+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 32/190 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR------LKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN +    +G+G FG V+  R       +    +AVK L  +AS     +F  E  ++++
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDWRKRFN-- 584
             + N+V+LLG C  G+   L++EYM         RS+       L    L  R R +  
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 585 ------------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK- 631
                       I   ++ G+ YL   S  + +HRDL   N L+ E +  KI+DFG+++ 
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 632 IFGGNQDQAD 641
           I+  +  +AD
Sbjct: 224 IYSADYYKAD 233

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI++FG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
            + ++  +K+GQG FG V+  R  K GQ++A+K+ L +   +G     + E+ ++  L+H
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            N+V L+  C               L++++     L  LL + L K  L   KR  +++ 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +  GL Y+HR+   +I+HRD+KA+N+L+  +   K++DFG+A+ F 
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLFDP---LKKERLDWRK 581
           L QH N+V LLG C  G   ++I EY           R    L  DP   +    L  R 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV ++  L H N
Sbjct: 16  NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 76  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +     I+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
            + ++  +K+GQG FG V+  R  K GQ++A+K+ L +   +G     + E+ ++  L+H
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            N+V L+  C               L++++     L  LL + L K  L   KR  +++ 
Sbjct: 77  ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 133
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +  GL Y+HR+   +I+HRD+KA+N+L+  +   K++DFG+A+ F 
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DG--QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+K DG   + A+KR+ + AS     +F  E+ V+ KL  
Sbjct: 22  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER-----------------LD 578
           H N++ LLG C       L  EY P+ +L     D L+K R                 L 
Sbjct: 82  HPNIINLLGACEHRGYLYLAIEYAPHGNL----LDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++  +    ++RG+ YL   S+ + IHR+L A NIL+ E    KI+DFG+++
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR-LSKASGQGLE-EFMNEVMVISKLQH 536
            + ++  +K+GQG FG V+  R  K GQ++A+K+ L +   +G     + E+ ++  L+H
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 537 RNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            N+V L+  C               L++++     L  LL + L K  L   KR  +++ 
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKR--VMQM 132
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +  GL Y+HR+   +I+HRD+KA+N+L+  +   K++DFG+A+ F 
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKL 534
           A  +F++   LG+G FG VY  R K  + I A+K L KA  +  G+E +   EV + S L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N++RL G   +     LI EY P   L  +  +  K  + D ++    I  ++  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           Y H     R+IHRD+K  N+LL      KI++FG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 12  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I+ G+ 
Sbjct: 72  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAEGMN 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 129 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGR----LKDGQE--IAVKRLSKASGQGLE-EFMN 526
           +E   A     +S +LGQG FG VY G     +KD  E  +A+K +++A+      EF+N
Sbjct: 5   DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+ +    ++VRLLG   +G+  ++I E M    L + L   L+ E  +        
Sbjct: 65  EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPS 123
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             K   +   I+ G+ YL+ +   + +HRDL A N  + E+   KI DFGM +
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV ++  L H N
Sbjct: 8   NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 68  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-EARAKFR---QIVSAVQYCH 123
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +     I+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 156

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
           FEE      + +  S+LG+G FG V   R        G  +AVK+L  +      +F  E
Sbjct: 20  FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 74
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           + ++  L    +V+  G     G + + L+ EY+P+  L   L     + RLD  +    
Sbjct: 75  IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 132
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              I +G+ YL   SR R +HRDL A NIL++ E + KI+DFG+AK+   ++D
Sbjct: 133 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           +NF+    LG+G FG V   R+K+ G   AVK L K        +E  M E  ++S  ++
Sbjct: 23  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLY 595
              +  L CC +  +++       N     L+F   K  R D  R RF   E IS  L++
Sbjct: 83  HPFLTQLFCCFQTPDRLFFVMEFVNGG--DLMFHIQKSRRFDEARARFYAAEIIS-ALMF 139
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           LH      II+RDLK  N+LLD E + K++DFGM K
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
           FEE      + +  S+LG+G FG V   R        G  +AVK+L  +      +F  E
Sbjct: 7   FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 61
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           + ++  L    +V+  G     G + + L+ EY+P+  L   L     + RLD  +    
Sbjct: 62  IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 119
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              I +G+ YL   SR R +HRDL A NIL++ E + KI+DFG+AK+   ++D
Sbjct: 120 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISKL
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G+S
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLS 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 19  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 79  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 136 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
           FEE      + +  S+LG+G FG V   R        G  +AVK+L  +      +F  E
Sbjct: 8   FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 62
Query: 528 VMVISKLQHRNLVRLLGCCV-EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           + ++  L    +V+  G     G + + L+ EY+P+  L   L     + RLD  +    
Sbjct: 63  IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLY 120
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              I +G+ YL   SR R +HRDL A NIL++ E + KI+DFG+AK+   ++D
Sbjct: 121 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 38  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------FDPLKKERLDWRKRFNI 585
           L QH N+V LLG C  G   ++I EY     L   L        D      L+ R   + 
Sbjct: 98  LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V   R K  G+++AVK +     Q  E   NEV+++   QH N+V +    
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + GEE  ++ E++   +L     D + + RL+  +   + E + + L YLH      +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ +ILL  +   K+SDFG  A+I   ++D      +VGT
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGT 204

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 77  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 134 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 77  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 134 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRN 538
             L   +G GGFG VY      G E+AVK           Q +E    E  + + L+H N
Sbjct: 9   LTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++ L G C++     L+ E+     L+ +L      +R+      N    I+RG+ YLH 
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 599 DSRLRIIHRDLKASNILLDEELNP--------KISDFGMAK 631
           ++ + IIHRDLK+SNIL+ +++          KI+DFG+A+
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISKL
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AV+ + K   +   L++   EV ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK--IFGGNQDQ 639
           +     I+HRDLKA N+LLD ++N KI+DFG +    FG   D+
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE 171

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AV+ + K   +   L++   EV ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +     I+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 484 QLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           ++  +LG G FG VY  + K+ G   A K +   S + LE+++ E+ +++   H  +V+L
Sbjct: 14  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLHR 598
           LG      +  ++ E+ P  ++DA++ +      LD       I+ + R +L    +LH 
Sbjct: 74  LGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
               RIIHRDLKA N+L+  E + +++DFG++
Sbjct: 128 K---RIIHRDLKAGNVLMTLEGDIRLADFGVS 156

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 17  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 77  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 133
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 134 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 22  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 82  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG AK+ G  + +  A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H N+V+LL       +  L++E++     D +    L    L   K +  +  + +GL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 118
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 154

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            ++F+  + LGQG FG V   R   D +  A+K++ + + + L   ++EVM+++ L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
           +VR                 V+ +  + I  EY  N +L D +  + L ++R + WR   
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            I+E +S    Y+H      IIHRDLK  NI +DE  N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------FDPLKKERLDWRKRFNI 585
           L QH N+V LLG C  G   ++I EY     L   L        D      L+ R   + 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H N+V+LL       +  L++E++     D +    L    L   K +  +  + +GL +
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 121
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMP---NRSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H N+V+LL       +  L++E++     D +    L    L   K +  +  + +GL +
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAF 120
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNE 527
           FEE      + +  S+LG+G FG V   R        G  +AVK+L  +      +F  E
Sbjct: 4   FEE-----RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE 58
Query: 528 VMVISKLQHRNLVRLLGCCVEG--EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           + ++  L    +V+  G        E  L+ EY+P+  L   L     + RLD  +    
Sbjct: 59  IQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLY 116
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              I +G+ YL   SR R +HRDL A NIL++ E + KI+DFG+AK+   ++D
Sbjct: 117 SSQICKGMEYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 484 QLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL 542
           ++  +LG G FG VY  + K+ G   A K +   S + LE+++ E+ +++   H  +V+L
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL----YLHR 598
           LG      +  ++ E+ P  ++DA++ +      LD       I+ + R +L    +LH 
Sbjct: 82  LGAYYHDGKLWIMIEFCPGGAVDAIMLE------LDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
               RIIHRDLKA N+L+  E + +++DFG++
Sbjct: 136 K---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMP---NRSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 157

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
           ++ L   LG G FG V  G+ +  G ++AVK L++   + L+   +   E+  +   +H 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYL 596
           ++++L        +  ++ EY+        LFD + K  RLD ++   + + I  G+ Y 
Sbjct: 77  HIIKLYQVISTPSDIFMVMEYVSG----GELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           HR     ++HRDLK  N+LLD  +N KI+DFG++ +    +
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDW 579
           L QH N+V LLG C  G   ++I EY     L   L           ++P    +E+L  
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           R   +    +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    L  G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 22  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 82  DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    L  G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 131
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 132 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 117
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 156

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 115
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 116 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKLQH 536
            +F +   LG+G FG VY  R +  + I A+K L K   +  G+E +   EV + S L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N++RL G   +     LI EY P   L  +  +  K  R D ++    I  ++  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    L  G FG VY G  + +G+++    A+K L +A S +  +E ++E  V++ +
Sbjct: 22  TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 82  DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 139 YL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 119
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 120 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 24/168 (14%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            ++F+  + LGQG FG V   R   D +  A+K++ + + + L   ++EV +++ L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQY 63
Query: 539 LVRLLGC------------CVEGEEKMLI-YEYMPNRSL-DALLFDPLKKERLD-WRKRF 583
           +VR                 V+ +  + I  EY  NR+L D +  + L ++R + WR   
Sbjct: 64  VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            I+E +S    Y+H      IIHR+LK  NI +DE  N KI DFG+AK
Sbjct: 124 QILEALS----YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+AVK + K   +   L++   EV +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +V+L       +   L+ EY       D L+     KE+ + R +F     I   + Y H
Sbjct: 75  IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-EARAKFR---QIVSAVQYCH 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG-GNQDQADTG 643
           +     I+HRDLKA N+LLD + N KI+DFG +  F  GN+  A  G
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG 174

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 489 LGQGGFG-PVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G FG  +     + G+ + +K L +   +    F+ EV V+  L+H N+++ +G   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR 607
           + +    I EY+   +L  ++       +  W +R +  + I+ G+ YLH    + IIHR
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 608 DLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           DL + N L+ E  N  ++DFG+A++    + Q +  R
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ + + L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 124
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 125 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 118
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 124
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 125 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 121
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 122 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQ--GLE-EFMNEVMVISKLQH 536
            +F +   LG+G FG VY  R +  + I A+K L K   +  G+E +   EV + S L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N++RL G   +     LI EY P   L  +  +  K  R D ++    I  ++  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKL 534
           A    ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L
Sbjct: 1   APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVV 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           YLH    + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 31/179 (17%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 31  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLF-------DP--LKKE 575
           L QH N+V LLG C  G   ++I EY           R  +A+L        DP  L KE
Sbjct: 91  LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 576 R---LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               L+ R   +    +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATN--------NFQLSSKLGQGGFGPVYWGRLK-- 503
           KLS    +T+     P + F    ++ +        N  L   LG G FG VY G++   
Sbjct: 2   KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 61
Query: 504 ----DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
                  ++AVK L +   +  E +F+ E ++ISK  H+N+VR +G  ++   + ++ E 
Sbjct: 62  PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 121
Query: 559 MPNRSLDALLFD----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           M    L + L +    P +   L      ++   I+ G  YL  +     IHRD+ A N 
Sbjct: 122 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 178
Query: 615 LLD---EELNPKISDFGMAK 631
           LL         KI DFGMA+
Sbjct: 179 LLTCPGPGRVAKIGDFGMAR 198

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVY------WGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V        G+     ++AVK L S A     E  M+E+ ++S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY--------MPNRSLDALLFDP---LKKERLDWRK 581
           L QH N+V LLG C  G   ++I EY           R    L  DP   +       R 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    +++G+ +L   +    IHRD+ A N+LL      KI DFG+A+
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI----AVKRLSKA-SGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G  + +G+++    A+  L +A S +  +E ++E  V++ +
Sbjct: 49  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+    + LI + MP   L  L +    K+ +  +   N    I++G+ 
Sbjct: 109 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 165
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
           YL  D RL  +HRDL A N+L+    + KI+DFG+AK+ G  + +  A+ G+V
Sbjct: 166 YLE-DRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+ +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
            N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK
Sbjct: 22  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
             H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I
Sbjct: 82  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           + G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+ +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 72  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 484 QLSSKLGQGGFGPVYWGRLK-DGQE---IAVKRL-SKASGQGLEEFMNEVMVISKLQHRN 538
           ++   +G G FG V  G LK  G+    +A+K L S  + +   +F++E  ++ +  H N
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++ L G   +    M+I E+M N SLD+ L       +    +   ++ GI+ G+ YL  
Sbjct: 70  VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYL-- 125
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            + +  +HR L A NIL++  L  K+SDFG+++  
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL 159

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++     + +DA        PL K  L     F +++G
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
            N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK
Sbjct: 48  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
             H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           + G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +  S Q   +F+ E ++ISK 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 122
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISKL 534
           N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
            H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I+
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
            G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQ 535
           +  NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEG 588
           H N+V+LL       +  L++E++       +DA        PL K  L     F +++G
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL-----FQLLQG 118
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 119 LA----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLE-EFMNEVMVISK 533
            N  L   LG G FG VY G++          ++AVK L +   +  E +F+ E ++ISK
Sbjct: 47  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGI 589
             H+N+VR +G  ++   + ++ E M    L + L +    P +   L      ++   I
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           + G  YL  +     IHRD+ A N LL         KI DFGMA+
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVI 531
            T    + +   LG+G FG V   + KD    QE AVK ++KAS +  +    + EV ++
Sbjct: 18  GTFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGIS 590
            KL H N+++L     +     ++ E          LFD + K++R        II+ + 
Sbjct: 76  KKLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
            G+ Y+H+ +   I+HRDLK  NILL   +++ + KI DFG++  F  N    D
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L  C  + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 97  PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 148
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 149 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVI 531
            T    + +   LG+G FG V   + KD    QE AVK ++KAS +  +    + EV ++
Sbjct: 18  GTFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGIS 590
            KL H N+++L     +     ++ E          LFD + K++R        II+ + 
Sbjct: 76  KKLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVF 131
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
            G+ Y+H+ +   I+HRDLK  NILL   +++ + KI DFG++  F  N    D
Sbjct: 132 SGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVRL 542
           LG+G FG V    +    DG  + +AVK L +  G  L   +  E+ ++  L H ++V+ 
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC +  EK   L+ EY+P  SL     D L +  +   +     + I  G+ YLH   
Sbjct: 77  KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 131
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHR L A N+LLD +   KI DFG+AK
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 160

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              ++   +G+G FG VY GR      I +  + + +   L+ F  EVM   + +H N+V
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
             +G C+      +I      R+L +++ D   K  LD  K   I + I +G+ YLH   
Sbjct: 93  LFMGACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 601 RLRIIHRDLKASNILLDEELNPK--ISDFGMAKIFG 634
              I+H+DLK+ N+  D   N K  I+DFG+  I G
Sbjct: 151 ---ILHKDLKSKNVFYD---NGKVVITDFGLFSISG 180

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNLVRL 542
           LG+G FG V    +    DG  + +AVK L +  G  L   +  E+ ++  L H ++V+ 
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC +  EK   L+ EY+P  SL     D L +  +   +     + I  G+ YLH   
Sbjct: 76  KGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLHAQ- 130
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHR L A N+LLD +   KI DFG+AK
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 159

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATN--------NFQLSSKLGQGGFGPVYWGRLK-- 503
           KLS    +T+     P + F    ++ +        N  L   LG G FG VY G++   
Sbjct: 22  KLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGM 81
Query: 504 ----DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
                  ++AVK L +   +  E +F+ E ++ISK  H+N+VR +G  ++   + ++ E 
Sbjct: 82  PNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 141
Query: 559 MPNRSLDALLFD----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           M    L + L +    P +   L      ++   I+ G  YL  +     IHRD+ A N 
Sbjct: 142 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC 198
Query: 615 LLD---EELNPKISDFGMAK 631
           LL         KI DFGMA+
Sbjct: 199 LLTCPGPGRVAKIGDFGMAR 218

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G +G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G +G VY GR L +   IA+K + +   +  +    E+ +   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 548 EGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNI-IEGISRGLLYLHRDSRLR 603
           E     +  E +P  SL ALL   + PLK    D  +      + I  GL YLH +   +
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 604 IIHRDLKASNILLDEELNP-KISDFGMAKIFGG 635
           I+HRD+K  N+L++      KISDFG +K   G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+K  RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYE--------YMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           N+V+LL       +  L++E        +M   +L  +   PL K  L     F +++G+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL-PLIKSYL-----FQLLQGL 115
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +    + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 116 A----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS-KASGQGLEEF-MNEVMVISKLQHRN 538
             +Q   K+G+G +G VY  +   G+ +A+KR+   A  +G+    + E+ ++ +L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V L+          L++E+M  + L  +L D  K    D + +  + + + RG+ + H+
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               RI+HRDLK  N+L++ +   K++DFG+A+ FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHR 537
           +F++ + LG+G F  VY    +  G E+A+K + K +      ++   NEV +  +L+H 
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           +++ L     +     L+ E   N  ++  L + +K    +  + F  +  I  G+LYLH
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGMLYLH 129
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
                 I+HRDL  SN+LL   +N KI+DFG+A
Sbjct: 130 SHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G +G VY GR L +   IA+K + +   +  +    E+ +   L+H+N+V+ LG   
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 548 EGEEKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNI-IEGISRGLLYLHRDSRLR 603
           E     +  E +P  SL ALL   + PLK    D  +      + I  GL YLH +   +
Sbjct: 76  ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 604 IIHRDLKASNILLDEELNP-KISDFGMAKIFGG 635
           I+HRD+K  N+L++      KISDFG +K   G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLS-KASGQGLEEF-MNEVMVISKLQHRN 538
             +Q   K+G+G +G VY  +   G+ +A+KR+   A  +G+    + E+ ++ +L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V L+          L++E+M  + L  +L D  K    D + +  + + + RG+ + H+
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               RI+HRDLK  N+L++ +   K++DFG+A+ FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
           +F  +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
           EF+NE  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +    
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                ++   +   I+ G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           A      +L   +G+G FG V  G  + G ++AVK + + A+ Q    F+ E  V+++L+
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 244
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
           H NLV+LLG  VE +  + ++ EYM   SL           L  D L K  LD  +    
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +EG +              +HRDL A N+L+ E+   K+SDFG+ K     QD
Sbjct: 305 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
           +F  +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
           EF+NE  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +    
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                ++   +   I+ G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
           +F  +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   
Sbjct: 3   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
           EF+NE  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +    
Sbjct: 63  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 121
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                ++   +   I+ G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLE 522
           +F  +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   
Sbjct: 6   VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 523 EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD---- 578
           EF+NE  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +    
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 579 ----WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                ++   +   I+ G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
           S  ++ T  L    + Q+E +    N    +++  +LG G FG VY  + K+   +A  K
Sbjct: 9   SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
            +   S + LE++M E+ +++   H N+V+LL          ++ E+    ++DA++   
Sbjct: 69  VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L+ ER     +  ++ +     L YLH +   +IIHRDLKA NIL   + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           A      +L   +G+G FG V  G  + G ++AVK + + A+ Q    F+ E  V+++L+
Sbjct: 8   ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 63
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
           H NLV+LLG  VE +  + ++ EYM   SL           L  D L K  LD  +    
Sbjct: 64  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +EG +              +HRDL A N+L+ E+   K+SDFG+ K     QD
Sbjct: 124 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 163

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
           S  ++ T  L    + Q+E +    N    +++  +LG G FG VY  + K+   +A  K
Sbjct: 9   SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
            +   S + LE++M E+ +++   H N+V+LL          ++ E+    ++DA++   
Sbjct: 69  VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L+ ER     +  ++ +     L YLH +   +IIHRDLKA NIL   + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           A      +L   +G+G FG V  G  + G ++AVK + + A+ Q    F+ E  V+++L+
Sbjct: 2   ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 57
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
           H NLV+LLG  VE +  + ++ EYM   SL           L  D L K  LD  +    
Sbjct: 58  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +EG +              +HRDL A N+L+ E+   K+SDFG+ K     QD
Sbjct: 118 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+   RL   +       + E+ ++ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 117
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 118 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 22/164 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            NFQ   K+G+G +G VY  R K  G+ +A+   RL   +       + E+ ++ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN---RSLDALLFD----PLKKERLDWRKRFNIIEGIS 590
           N+V+LL       +  L++E++     + +DA        PL K  L     F +++G++
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL-----FQLLQGLA 116
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
               + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 117 ----FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 456 SATNVNTVKLQDLPLFQFEELATATNN---FQLSSKLGQGGFGPVYWGRLKDGQEIAV-K 511
           S  ++ T  L    + Q+E +    N    +++  +LG G FG VY  + K+   +A  K
Sbjct: 9   SGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAK 68
Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
            +   S + LE++M E+ +++   H N+V+LL          ++ E+    ++DA++   
Sbjct: 69  VIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM--- 125
Query: 572 LKKERLDWRKRFNII-EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L+ ER     +  ++ +     L YLH +   +IIHRDLKA NIL   + + K++DFG++
Sbjct: 126 LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 28/173 (16%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           A      +L   +G+G FG V  G  + G ++AVK + + A+ Q    F+ E  V+++L+
Sbjct: 17  ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLR 72
Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSL---------DALLFDPLKKERLDWRKRFNI 585
           H NLV+LLG  VE +  + ++ EYM   SL           L  D L K  LD  +    
Sbjct: 73  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +EG +              +HRDL A N+L+ E+   K+SDFG+ K     QD
Sbjct: 133 LEGNN-------------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEE--FMNEVMVIS 532
           T    + +   LG+G FG V   + KD    QE AVK ++KAS +  +    + EV ++ 
Sbjct: 19  TFAERYNIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
           KL H N+++L     +     ++ E          LFD + K++R        II+ +  
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELYTG----GELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 592 GLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQAD 641
           G+ Y+H+ +   I+HRDLK  NILL   +++ + KI DFG++  F  N    D
Sbjct: 133 GITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
           L  A   ++  +++G+G +G V+  R LK+G   +A+KR+   +G+ G+    + EV V+
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
             L+   H N+VRL   C     + E K+ L++E++ ++ L   L D + +  +      
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +++  + RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+ 
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V    +    DG  + +AVK L    G Q    +  E+ ++  L H ++++ 
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC +  EK   L+ EY+P  SL     D L +  +   +     + I  G+ YLH   
Sbjct: 82  KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHR+L A N+LLD +   KI DFG+AK
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
           L  A   ++  +++G+G +G V+  R LK+G   +A+KR+   +G+ G+    + EV V+
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
             L+   H N+VRL   C     + E K+ L++E++ ++ L   L D + +  +      
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +++  + RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+ 
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 87  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG        Q +  T  +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGR-LKDGQE-IAVKRLSKASGQ-GLE-EFMNEVMVI 531
           L  A   ++  +++G+G +G V+  R LK+G   +A+KR+   +G+ G+    + EV V+
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 532 SKLQ---HRNLVRLLGCCV----EGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
             L+   H N+VRL   C     + E K+ L++E++ ++ L   L D + +  +      
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIK 123
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +++  + RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+ 
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 89/161 (55%), Gaps = 22/161 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRL--KDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQ-HR 537
           ++L  KLG+G +G + W  +  + G+ +AVK++  A  +    +    E+M++++L  H 
Sbjct: 11  YELVKKLGKGAYG-IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 538 NLVRLLGCCVEGEEK--MLIYEYMP---NRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           N+V LL       ++   L+++YM    +  + A + +P+ K+         ++  + + 
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY--------VVYQLIKV 121
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           + YLH      ++HRD+K SNILL+ E + K++DFG+++ F
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V    +    DG  + +AVK L    G Q    +  E+ ++  L H ++++ 
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 543 LGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC +  EK   L+ EY+P  SL     D L +  +   +     + I  G+ YLH   
Sbjct: 82  KGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHR+L A N+LLD +   KI DFG+AK
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
           +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   EF+N
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +        
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 128
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +   I+ G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 87  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG  A+I     +Q+    +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVGT 179

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLS-KASGQGLEEFMNEVMVISKLQHR 537
             ++ L   LG+G  G V     +  +E +AVK +  K +    E    E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+  G   EG  + L  EY     L   +   +     D ++ F+    +  G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH 121
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPVY---WGRLKDG--QEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG+G FG V    +    DG  + +AVK L   +G Q    +  E+ ++  L H ++++ 
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 543 LGCCVEG--EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            GCC +       L+ EY+P  SL     D L +  +   +     + I  G+ YLH   
Sbjct: 99  KGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               IHRDL A N+LLD +   KI DFG+AK
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 87  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG  A+I     +Q+    +VGT
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGT 179

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 88  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 607 RDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGRVVGT 648
           RD+K+ NILL  + + K++DFG  A+I     +Q+    +VGT
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGT 180

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 27/171 (15%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEF-MNEVMVISKLQ 535
           ++++ F+   KLG G +  VY G  K  G  +A+K +   S +G     + E+ ++ +L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----- 590
           H N+VRL        +  L++E+M N            K+ +D R   N   G+      
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDNDL----------KKYMDSRTVGNTPRGLELNLVK 111
Query: 591 -------RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
                  +GL + H +   +I+HRDLK  N+L+++    K+ DFG+A+ FG
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEI----AVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG VY G  + DG+ +    A+K L +  S +  +E ++E  V++ +    + RL
Sbjct: 25  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
           LG C+    + L+ + MP       L D +++ R  L  +   N    I++G+ YL    
Sbjct: 85  LGICLTSTVQ-LVTQLMPY----GCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ--ADTGRV 645
            +R++HRDL A N+L+    + KI+DFG+A++   ++ +  AD G+V
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 489 LGQGGFGPVYWGRLKDGQE----IAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLL 543
           +G+G FG VY G   D  +     A+K LS+ +  Q +E F+ E +++  L H N++ L+
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 544 GCCV--EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           G  +  EG   +L+  YM +  L   +  P +   +     F +   ++RG+ YL   + 
Sbjct: 89  GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYL---AE 142
Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAK 631
            + +HRDL A N +LDE    K++DFG+A+
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLAR 172

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 485 LSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHR 537
           L  +LGQG FG VY G  +D         +AVK +++ AS +   EF+NE  V+      
Sbjct: 20  LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD--------WRKRFNIIEGI 589
           ++VRLLG   +G+  +++ E M +  L + L   L+ E  +         ++   +   I
Sbjct: 80  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           + G+ YL+     + +HRDL A N ++  +   KI DFGM +
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS-KASGQGLE-EFMNEVMVISK 533
           AT+ + ++  +KLG+G +G VY        + +A+KR+  +   +G+    + EV ++ +
Sbjct: 30  ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           LQHRN++ L           LI+EY  N     +  +P    R+     + +I G++   
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN--- 146
Query: 594 LYLHRDSRLRIIHRDLKASNILL---DEELNP--KISDFGMAKIFG 634
            + H  SR R +HRDLK  N+LL   D    P  KI DFG+A+ FG
Sbjct: 147 -FCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK--DGQ--EIAVKRLSK--ASGQGLEEFM 525
           + E++      F L   LG+G FG V   +LK  DG   ++AVK L     +   +EEF+
Sbjct: 14  KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEK------MLIYEYMPNRSLDALLFDPLKKER--- 576
            E   + +  H ++ +L+G  +    K      M+I  +M +  L A L      E    
Sbjct: 74  REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA-KIFGG 635
           L  +     +  I+ G+ YL   S    IHRDL A N +L E++   ++DFG++ KI+ G
Sbjct: 134 LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 636 N 636
           +
Sbjct: 191 D 191

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 7   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 67  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 118
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 475 ELATATNNFQLSSK------LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FM 525
           +L T    FQ   K      +G+G +G V   R KD G+ +A+K+  ++    + +   M
Sbjct: 13  DLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM 72
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW----RK 581
            E+ ++ +L+H NLV LL  C + +   L++E++ +  LD L   P     LD+    + 
Sbjct: 73  REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKY 129
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
            F II GI  G  + H      IIHRD+K  NIL+ +    K+ DFG A+    
Sbjct: 130 LFQIINGI--GFCHSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 10  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 70  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 121
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 119
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V  L   
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +   ++IH
Sbjct: 88  LVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           R++K+ NILL  + + K++DFG        Q +  T  +VGT
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVIS 532
           E L   +   QL     +G FG V+  +L + + +AVK       Q  + E+  EV  + 
Sbjct: 17  ENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLP 73
Query: 533 KLQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            ++H N+++ +G    G     +  LI  +    SL     D LK   + W +  +I E 
Sbjct: 74  GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLS----DFLKANVVSWNELCHIAET 129
Query: 589 ISRGLLYLHRD-------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
           ++RGL YLH D        +  I HRD+K+ N+LL   L   I+DFG+A  F   +   D
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 642 TGRVVGT 648
           T   VGT
Sbjct: 190 THGQVGT 196

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 9   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 69  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 120
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 74  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 125
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
           +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   EF+N
Sbjct: 11  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +        
Sbjct: 71  EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 129
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +   I+ G+ YL+     + +HR+L A N ++  +   KI DFGM +
Sbjct: 130 LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 72  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 124
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMN---EVMVISKLQHRN 538
           + +   LG+G FG V      K  Q++A+K +S+   +  +  M    E+  +  L+H +
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYL 596
           +++L        + +++ EY      D ++    +K+R+  D  +RF   + I   + Y 
Sbjct: 71  IIKLYDVITTPTDIVMVIEYAGGELFDYIV----EKKRMTEDEGRRF--FQQIICAIEYC 124
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           HR    +I+HRDLK  N+LLD+ LN KI+DFG++ I 
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 78  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 130
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 140
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSK-ASGQGLEEFMN 526
           +E   +     L  +LGQG FG VY G  +D         +AVK +++ AS +   EF+N
Sbjct: 10  DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-------- 578
           E  V+      ++VRLLG   +G+  +++ E M +  L + L   L+ E  +        
Sbjct: 70  EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPT 128
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +   I+ G+ YL+     + +HR+L A N ++  +   KI DFGM +
Sbjct: 129 LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 140
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 72  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 124
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 78  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 130
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR--LKDGQ--EIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+   +AVK L     +  + +++F+ EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER----LDWRKRFNIIEGI 589
           L HRNL+RL G  +    KM + E  P  SL     D L+K +    L    R+ +   +
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QV 120
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           + G+ YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 95  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 146
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 23/163 (14%)
Query: 488 KLGQGGFGPVYWGRLKDGQ-EIAVKRLSKAS-------------GQGLEEFMNEVMVISK 533
           KLG G +G V   + K+G  E A+K + K+               +  EE  NE+ ++  
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           L H N+++L     + +   L+ E+     L   +   + + + D     NI++ I  G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECDAANIMKQILSGI 159
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIF 633
            YLH+ +   I+HRD+K  NILL+ +   LN KI DFG++  F
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
            K+G+G +G VY  +   G+  A+K  RL K         + E+ ++ +L+H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
                +  +L++E++                  D +K  ++ EG             +  
Sbjct: 68  VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           G+ Y H     R++HRDLK  N+L++ E   KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
            K+G+G +G VY  +   G+  A+K  RL K         + E+ ++ +L+H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
                +  +L++E++                  D +K  ++ EG             +  
Sbjct: 68  VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           G+ Y H     R++HRDLK  N+L++ E   KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 487 SKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
            K+G+G +G VY  +   G+  A+K  RL K         + E+ ++ +L+H N+V+L  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG-------------ISR 591
                +  +L++E++                  D +K  ++ EG             +  
Sbjct: 68  VIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           G+ Y H     R++HRDLK  N+L++ E   KI+DFG+A+ FG
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-------ETCTRFYTAEIVS- 143
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGL 521
           L ++P  +F       ++F +   LG+G FG VY  R K  + I A+K L  S+   +G+
Sbjct: 4   LAEMPKRKF-----TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 522 E-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDW 579
           E +   E+ + S L+H N++R+     + +   L+ E+ P       L+  L+K  R D 
Sbjct: 59  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR----GELYKELQKHGRFDE 114
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           ++    +E ++  L Y H     ++IHRD+K  N+L+  +   KI+DFG
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 160

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRL--SKASGQGL 521
           L ++P  +F       ++F +   LG+G FG VY  R K  + I A+K L  S+   +G+
Sbjct: 3   LAEMPKRKF-----TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 522 E-EFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDW 579
           E +   E+ + S L+H N++R+     + +   L+ E+ P       L+  L+K  R D 
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR----GELYKELQKHGRFDE 113
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           ++    +E ++  L Y H     ++IHRD+K  N+L+  +   KI+DFG
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
           AT+ ++  +++G G +G VY  R    G  +A+K +   +G+ GL    + EV ++ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
              H N+VRL+  C         +  L++E++ ++ L   L D      L      +++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              RGL +LH +    I+HRDLK  NIL+      K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
           AT+ ++  +++G G +G VY  R    G  +A+K +   +G+ GL    + EV ++ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
              H N+VRL+  C         +  L++E++ ++ L   L D      L      +++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              RGL +LH +    I+HRDLK  NIL+      K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ-GLE-EFMNEVMVISKLQ 535
           AT+ ++  +++G G +G VY  R    G  +A+K +   +G+ GL    + EV ++ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 536 ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
              H N+VRL+  C         +  L++E++ ++ L   L D      L      +++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              RGL +LH +    I+HRDLK  NIL+      K++DFG+A+I+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAV----KRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG V+ G  + +G+ I +    K +   SG Q  +   + ++ I  L H ++VRL
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
           LG C  G    L+ +Y+P  SL     D +++ R  L  +   N    I++G+ YL    
Sbjct: 99  LGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
              ++HR+L A N+LL      +++DFG+A +   +  Q
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 16/159 (10%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAV----KRLSKASG-QGLEEFMNEVMVISKLQHRNLVRL 542
           LG G FG V+ G  + +G+ I +    K +   SG Q  +   + ++ I  L H ++VRL
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLLYLHRDS 600
           LG C  G    L+ +Y+P  SL     D +++ R  L  +   N    I++G+ YL    
Sbjct: 81  LGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
              ++HR+L A N+LL      +++DFG+A +   +  Q
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V     K  G+++AVK++     Q  E   NEV+++    H N+V +    
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + R L YLH      +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG 186

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL---SKASGQGLE-EFMNEVMVISKLQH 536
           ++F++   LG+G FG VY  R K    I   ++   S+   +G+E +   E+ + + L H
Sbjct: 23  DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLY 595
            N++RL     +     LI EY P       L+  L+K    D ++   I+E ++  L+Y
Sbjct: 83  PNILRLYNYFYDRRRIYLILEYAPR----GELYKELQKSCTFDEQRTATIMEELADALMY 138
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            H     ++IHRD+K  N+LL  +   KI+DFG
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFG 168

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKL 534
           +  +FQ+   LG G FG V+  R + +G+  A+K L K      + +E   +E +++S +
Sbjct: 4   SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGL 593
            H  ++R+ G   + ++  +I +Y+    L +LL    K +R  +   +F   E +   L
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAE-VCLAL 119
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            YLH      II+RDLK  NILLD+  + KI+DFG AK
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F      R L   +E A+K L K        +     E  V+S+L H
Sbjct: 30  EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----FDPLKKERLDWRKRFNIIEGISR 591
              V+L     + E+      Y  N  L   +     FD       +   RF   E +S 
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-------ETCTRFYTAEIVS- 141
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            L YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
           ++ L   LG G FG V  G  +  G ++AVK L++   + L+   +   E+  +   +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++++L        +  ++ EY+    L   +    + E ++ R+ F   + I   + Y H
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           R     ++HRDLK  N+LLD  +N KI+DFG++ + 
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQHR 537
           ++ L   LG G FG V  G  +  G ++AVK L++   + L+   +   E+  +   +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++++L        +  ++ EY+    L   +    + E ++ R+ F   + I   + Y H
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF---QQILSAVDYCH 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           R     ++HRDLK  N+LLD  +N KI+DFG++ +    +   D+
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
           +     LG G F  V     K  Q+ +A+K ++K + +G E  M NE+ V+ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
            L      G    LI + +    L D ++      ER   R  F +++ +     YLH  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L I+HRDLK  N+L   LDE+    ISDFG++K+        D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRL---SKASGQGLEEFMNEVMVISKLQHRN 538
           +++  KLG GG   VY         ++A+K +    +   + L+ F  EV   S+L H+N
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYL 596
           +V ++    E +   L+ EY+   +L   +    PL  +        N    I  G+ + 
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD-----TAINFTNQILDGIKHA 127
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           H    +RI+HRD+K  NIL+D     KI DFG+AK          T  V+GT+
Sbjct: 128 HD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGTV 176

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
           +     LG G F  V     K  Q+ +A+K ++K + +G E  M NE+ V+ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
            L      G    LI + +    L D ++      ER   R  F +++ +     YLH  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L I+HRDLK  N+L   LDE+    ISDFG++K+        D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
           +F     A  ++ ++    LG+G FG V   + K  GQE AVK +SK         E  +
Sbjct: 21  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
            EV ++ +L H N+++L       E+K   Y      +   L  + + ++R        I
Sbjct: 81  REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 137
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
           I  +  G+ Y+H++   +I+HRDLK  N+LL+   ++ N +I DFG++  F  ++   D
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 193

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
           +     LG G F  V     K  Q+ +A+K ++K + +G E  M NE+ V+ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
            L      G    LI + +    L D ++      ER   R  F +++ +     YLH  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L I+HRDLK  N+L   LDE+    ISDFG++K+        D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    ++G+G FG VY G     +E+ A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 541 RLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           R  G  ++  +  +I EY+   S LD L   PL++  +       I+  I +GL YLH +
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 135
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMA 630
              R IHRD+KA+N+LL E+ + K++DFG+A
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVA 163

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
           +     LG G F  V     K  Q+ +A+K ++K + +G E  M NE+ V+ K++H N+V
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
            L      G    LI + +    L D ++      ER   R  F +++ +     YLH  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK----YLH-- 133
Query: 600 SRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L I+HRDLK  N+L   LDE+    ISDFG++K+        D G V+ T
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLST 177

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 43/194 (22%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
           +F     A  ++ ++    LG+G FG V   + K  GQE AVK +SK         E  +
Sbjct: 15  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDAL---------LFDPLKKER 576
            EV ++ +L H N+++L             YE+  ++    L         LFD +    
Sbjct: 75  REVQLLKQLDHPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIIS-- 119
Query: 577 LDWRKRFN------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDF 627
              RKRF+      II  +  G+ Y+H++   +I+HRDLK  N+LL+   ++ N +I DF
Sbjct: 120 ---RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 628 GMAKIFGGNQDQAD 641
           G++  F  ++   D
Sbjct: 174 GLSTHFEASKKMKD 187

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLV 540
           F+L   +G G +G VY GR +K GQ  A+K +   +G   EE   E+ ++ K   HRN+ 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 541 RLLGCCVE------GEEKMLIYEYMPNRSLDALLFDP----LKKERLDWRKRFNIIEGIS 590
              G  ++       ++  L+ E+    S+  L+ +     LK+E + +     I   I 
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----ICREIL 139
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           RGL +LH+    ++IHRD+K  N+LL E    K+ DFG++
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
           + +V+  K+ + P ++F        N  L   LG+G FG V     +  + + G   +AV
Sbjct: 4   SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
           K L + AS   L + ++E  V+ ++ H ++++L G C +    +LI EY    SL   L 
Sbjct: 59  KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
           +  K                LD      +  G        IS+G+ YL   + ++++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
           L A NIL+ E    KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
           ++++L   +G G    V        +E +A+KR++    Q  ++E + E+  +S+  H N
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKER----LDWRKRFNIIEGISRGL 593
           +V      V  +E  L+ + +   S LD +     K E     LD      I+  +  GL
Sbjct: 70  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            YLH++ +   IHRD+KA NILL E+ + +I+DFG++       D
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 171

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 456 SATNVNTVKLQDLPLFQFEELATA----TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAV 510
           SA    T+  ++ P F  +EL          +Q  S +G G +G V     +K G +IAV
Sbjct: 22  SAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAV 81
Query: 511 KRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDAL 567
           K+LS+   S    +    E+ ++  ++H N++ LL             + Y+    + A 
Sbjct: 82  KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD 141
Query: 568 LFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF 627
           L + +K ++L       +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DF
Sbjct: 142 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF 198
Query: 628 GMAKIFGGNQDQADTGRVV 646
           G+A+    + D   TG V 
Sbjct: 199 GLAR----HTDDEMTGYVA 213

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           F+P    +E+L  + 
Sbjct: 92  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
           + +V+  K+ + P ++F        N  L   LG+G FG V     +  + + G   +AV
Sbjct: 4   SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
           K L + AS   L + ++E  V+ ++ H ++++L G C +    +LI EY    SL   L 
Sbjct: 59  KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
           +  K                LD      +  G        IS+G+ YL   + ++++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
           L A NIL+ E    KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
           +F     A  ++ ++    LG+G FG V   + K  GQE AVK +SK         E  +
Sbjct: 38  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
            EV ++ +L H N+++L       E+K   Y      +   L  + + ++R        I
Sbjct: 98  REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 154
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
           I  +  G+ Y+H++   +I+HRDLK  N+LL+   ++ N +I DFG++  F  ++   D
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 210

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
           ++++L   +G G    V        +E +A+KR++    Q  ++E + E+  +S+  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRS-LDALLFDPLKKER----LDWRKRFNIIEGISRGL 593
           +V      V  +E  L+ + +   S LD +     K E     LD      I+  +  GL
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            YLH++ +   IHRD+KA NILL E+ + +I+DFG++       D
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 176

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFM 525
           +F     A  ++ ++    LG+G FG V   + K  GQE AVK +SK         E  +
Sbjct: 39  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
            EV ++ +L H N+++L       E+K   Y      +   L  + + ++R        I
Sbjct: 99  REVQLLKQLDHPNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 155
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
           I  +  G+ Y+H++   +I+HRDLK  N+LL+   ++ N +I DFG++  F  ++   D
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 211

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 11  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 65
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 66  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 125
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 126 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 182
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 183 TENNVMKIADFGLAR 197

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V           + K+   +AVK L   A+ + L + ++E+ ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERL 577
             + +H+N++ LLG C +     +I EY    +L   L              + + +E++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +    ++RG+ YL   +  + IHRDL A N+L+ E    KI+DFG+A+
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    +I+DFG+A+
Sbjct: 191 TENNVMRIADFGLAR 205

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 8   VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 62
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 63  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 122
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 123 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 179
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 180 TENNVMKIADFGLAR 194

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 6   VSEYELPEDPKWEF-----PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 60
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I EY    +L   L 
Sbjct: 61  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 120
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 121 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLV 177
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 178 TENNVMKIADFGLAR 192

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    ++G+G FG V+ G   +  Q +A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 25  FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++G +  +I EY+   S      D L+    D  +   +++ I +GL YLH + 
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   IHRD+KA+N+LL E+ + K++DFG+A      Q + +T   VGT
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 183

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 26/174 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERL 577
             + +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +   +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 24  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 84  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + QL     +G FG V+  +L +   +AVK       Q  +    E+     ++H NL++
Sbjct: 16  SLQLLEIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQ 73
Query: 542 LLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
            +     G     E  LI  +    SL     D LK   + W +  ++ E +SRGL YLH
Sbjct: 74  FIAAEKRGSNLEVELWLITAFHDKGSLT----DYLKGNIITWNELCHVAETMSRGLSYLH 129
Query: 598 RD--------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            D         +  I HRD K+ N+LL  +L   ++DFG+A  F   +   DT   VGT
Sbjct: 130 EDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 25  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 85  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 21  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 81  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 92  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 92  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 485 LSSKLGQGGFGPVYW----GRLKDG----QEIAVKRL-SKASGQGLEEFMNEVMVISKL- 534
           L   LG+G FG V      G  KD      ++AVK L S A+ + L + ++E+ ++  + 
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-----------FDPLK--KERLDWRK 581
           +H+N++ LLG C +     +I EY    +L   L           ++P    +E+L  + 
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 36/203 (17%)
Query: 457 ATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPV-----YWGRLKDG-QEIAV 510
           + +V+  K+ + P ++F        N  L   LG+G FG V     +  + + G   +AV
Sbjct: 4   SLSVDAFKILEDPKWEF-----PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAV 58
Query: 511 KRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF 569
           K L + AS   L + ++E  V+ ++ H ++++L G C +    +LI EY    SL   L 
Sbjct: 59  KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 570 DPLK-------------KERLDWRKRFNIIEG--------ISRGLLYLHRDSRLRIIHRD 608
           +  K                LD      +  G        IS+G+ YL   + + ++HRD
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRD 175
Query: 609 LKASNILLDEELNPKISDFGMAK 631
           L A NIL+ E    KISDFG+++
Sbjct: 176 LAARNILVAEGRKMKISDFGLSR 198

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM-NEVMVISKLQHRNLV 540
           F+    LG G F  V     K  G+  AVK + K + +G E  + NE+ V+ K++H N+V
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN-IIEGISRGLLYLHRD 599
            L           L+ + +        LFD + ++     K  + +I  +   + YLHR 
Sbjct: 84  ALEDIYESPNHLYLVMQLVSG----GELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR- 138
Query: 600 SRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
             + I+HRDLK  N+L    DEE    ISDFG++K+ G
Sbjct: 139 --MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG 174

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-----EVMVISKLQHRNLVRL 542
           LG+G F  VY  R K+  Q +A+K++        ++ +N     E+ ++ +L H N++ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           L          L++++M    L+ ++ D          K + ++    +GL YLH+    
Sbjct: 78  LDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW-- 132
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            I+HRDLK +N+LLDE    K++DFG+AK FG
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K+   D  K F  
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 639 QADTG 643
               G
Sbjct: 206 YVRKG 210

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
               G
Sbjct: 204 XVRKG 208

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I  Y    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +ELA         +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 2   PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K  +L   
Sbjct: 62  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
            TG V
Sbjct: 175 MTGYV 179

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 639 QADTG 643
               G
Sbjct: 195 XVRKG 199

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 639 QADTG 643
               G
Sbjct: 195 XVRKG 199

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 23  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 83  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 195
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 196 DDEMTGYVA 204

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 22  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 81
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 82  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 194
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 195 DDEMTGYVA 203

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 87  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG 161

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 639 QADTG 643
               G
Sbjct: 204 XVRKG 208

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 91  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFG 165

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVIS 532
           A  ++ ++    LG+G FG V   + K  GQE AVK +SK         E  + EV ++ 
Sbjct: 22  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           +L H N+ +L       E+K   Y      +   L  + + ++R        II  +  G
Sbjct: 82  QLDHPNIXKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQAD 641
           + Y H++   +I+HRDLK  N+LL+   ++ N +I DFG++  F  ++   D
Sbjct: 139 ITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD 187

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 9   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 182 DDEMTGYVA 190

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 23  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 83  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 193

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LSK   S 
Sbjct: 15  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 75  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 188 DDEMTGYVA 196

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 639 QADTG 643
               G
Sbjct: 204 YVRKG 208

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K E  D  K F  
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE--DLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 147 LEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
               G
Sbjct: 204 XVRKG 208

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWG--------RLKDGQEIAVK 511
           V+  +L + P ++F       +   L   LG+G FG V           + K+   +AVK
Sbjct: 19  VSEYELPEDPKWEF-----PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73
Query: 512 RLSK-ASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL- 568
            L   A+ + L + ++E+ ++  + +H+N++ LLG C +     +I  Y    +L   L 
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLR 133
Query: 569 ------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
                        + + +E++ ++   +    ++RG+ YL   +  + IHRDL A N+L+
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190
Query: 617 DEELNPKISDFGMAK 631
            E    KI+DFG+A+
Sbjct: 191 TENNVMKIADFGLAR 205

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 639 QADTG 643
               G
Sbjct: 195 YVRKG 199

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 639 QADTG 643
               G
Sbjct: 195 YVRKG 199

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 38  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 98  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFG 172

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGC 545
           KLG+G +  VY G+ K     +A+K +     +G     + EV ++  L+H N+V L   
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
               +   L++EY+ ++ L   L D      +   K F  +  + RGL Y HR    +++
Sbjct: 69  IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCHRQ---KVL 122
Query: 606 HRDLKASNILLDEELNPKISDFGMAK 631
           HRDLK  N+L++E    K++DFG+A+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR 148

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 64  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 184 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 639 QADTG 643
               G
Sbjct: 241 YVRKG 245

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 96  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFG 170

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 8   QERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 181 DDEMTGYV 188

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGXV 183

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    K+G+G FG V+ G     Q++ A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++  +  +I EY+   S      D L+   LD  +   I+  I +GL YLH + 
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   IHRD+KA+N+LL E    K++DFG+A      Q + +T   VGT
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 187

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 8   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 181 DDEMTGYV 188

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  + +G G +G V      K G  +AVK+LS+   S 
Sbjct: 13  QERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 72
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 73  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 132
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 133 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 185
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 186 DDEMTGYV 193

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 8   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 181 DDEMTGYV 188

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
           + +   ++++   +G G +G     R K DG+ +  K L   S    E+ M  +EV ++ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
           +L+H N+VR     ++     L  + EY     L +++    K ++ LD      ++  +
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  L   HR  D    ++HRDLK +N+ LD + N K+ DFG+A+I   ++D A     VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVG 178
Query: 648 T 648
           T
Sbjct: 179 T 179

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 5   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 65  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 178 DDEMTGYV 185

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 62  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
            TG V
Sbjct: 175 MTGYV 179

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    K+G+G FG V+ G     Q++ A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++  +  +I EY+   S      D L+   LD  +   I+  I +GL YLH + 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   IHRD+KA+N+LL E    K++DFG+A      Q + +T   VGT
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 167

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 5   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 65  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 178 DDEMTGYV 185

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 15  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 75  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 188 DDEMTGYVA 196

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 15  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 74
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 75  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 135 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 187
Query: 638 DQADTGRVV 646
           D   TG V 
Sbjct: 188 DDEMTGYVA 196

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 23  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 82
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 83  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 142
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 143 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 195
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 196 DDEMTGYV 203

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 8   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 68  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 180
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 181 DDEMTGYV 188

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 2   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 61
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 62  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 121
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 122 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 174
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 175 DDEMTGYV 182

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 14  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 74  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----HT 186
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 187 DDEMTGYV 194

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 22  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 81
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 82  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 141
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 142 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 194
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 195 DDEMTGYV 202

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 10  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 182
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 183 DDEMTGYV 190

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 5   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 65  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 178 DDEMTGYV 185

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
           + +   ++++   +G G +G     R K DG+ +  K L   S    E+ M  +EV ++ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
           +L+H N+VR     ++     L  + EY     L +++    K ++ LD      ++  +
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  L   HR  D    ++HRDLK +N+ LD + N K+ DFG+A+I   N D +     VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVG 178
Query: 648 T 648
           T
Sbjct: 179 T 179

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 14  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 73
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 74  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 186
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 187 DDEMTGYV 194

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 26  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 86  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 198
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 199 DDEMTGYV 206

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 9   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 182 DDEMTGYV 189

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFM--NEVMVIS 532
           + +   ++++   +G G +G     R K DG+ +  K L   S    E+ M  +EV ++ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 533 KLQHRNLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGI 589
           +L+H N+VR     ++     L  + EY     L +++    K ++ LD      ++  +
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 590 SRGLLYLHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  L   HR  D    ++HRDLK +N+ LD + N K+ DFG+A+I   N D +     VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVG 178
Query: 648 T 648
           T
Sbjct: 179 T 179

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQH 536
           T     Q+  ++G+G +G V+ G+ + G+++AVK   +        E   E+     ++H
Sbjct: 34  TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRH 90
Query: 537 RNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            N++  +   ++G     +  LI +Y  N SL    +D LK   LD +    +      G
Sbjct: 91  ENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSG 146
Query: 593 LLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
           L +LH +      +  I HRDLK+ NIL+ +     I+D G+A  F  + ++ D
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 10  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 9   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 182 DDEMTGYV 189

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 62  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 26  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 86  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 146 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 196

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 10  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++   +L     D +   R++  +   +   + + L  LH      +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFG 215

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRL----- 542
           LG GG G V+     D  + +A+K++     Q ++  + E+ +I +L H N+V++     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 543 ---------LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
                    +G   E     ++ EYM     + L   PL    L+   R  + + + RGL
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL----LEEHARLFMYQ-LLRGL 133
Query: 594 LYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF 633
            Y+H  +   ++HRDLK +N+ ++ E+L  KI DFG+A+I 
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G  G V    ++  G+ +AVK++     Q  E   NEV+++   QH N+V +    
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           + G+E  ++ E++        L D +   R++  +   +   + + L  LH      +IH
Sbjct: 218 LVGDELWVVMEFLEG----GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 607 RDLKASNILLDEELNPKISDFG 628
           RD+K+ +ILL  +   K+SDFG
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFG 292

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 10  QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 70  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+
Sbjct: 130 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 19/171 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFM-----NEVMV 530
           + AT+ ++  +++G G +G VY  R    G  +A+K +   +G G    +      EV +
Sbjct: 5   SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 531 ISKLQ---HRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
           + +L+   H N+VRL+  C         +  L++E++ ++ L   L D      L     
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETI 122
Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            +++    RGL +LH +    I+HRDLK  NIL+      K++DFG+A+I+
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 170

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 36/178 (20%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +F+    +G GGFG V+  + + DG+   ++R+   +    E+   EV  ++KL H N+V
Sbjct: 13  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 541 RLLGC-------CVEGEEKMLIYEYMP------NRSLDALLF---------------DPL 572
              GC           ++ +   +Y P      +RS    LF               +  
Sbjct: 69  HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 573 KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           + E+LD      + E I++G+ Y+H     ++IHRDLK SNI L +    KI DFG+ 
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 5   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 65  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 125 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR----HT 177
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 178 DDEMTGYV 185

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 9   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 69  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + 
Sbjct: 129 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR----HT 181
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 182 DDEMTGYV 189

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGL-EEFMNEVMVISKLQHRNL 539
           ++   K+G+G +G V+  + ++  EI A+KR+      +G+    + E+ ++ +L+H+N+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           VRL       ++  L++E+  ++ L    FD    + LD     + +  + +GL + H  
Sbjct: 64  VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           SR  ++HRDLK  N+L++     K++DFG+A+ FG
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 4   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 64  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 124 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 176
Query: 641 DTGRV 645
            TG V
Sbjct: 177 MTGYV 181

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 3   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 63  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 641 DTGRV 645
            TG V
Sbjct: 176 MTGYV 180

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 2   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 62  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 122 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 641 DTGRV 645
            TG V
Sbjct: 175 MTGYV 179

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FMNEVMVISKLQHR 537
             ++   K+G+G +G V+  R +D GQ +A+K+  ++    + +   + E+ ++ +L+H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS----RGL 593
           NLV LL          L++EY  +  L  L       +R       ++++ I+    + +
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDHTVLHEL-------DRYQRGVPEHLVKSITWQTLQAV 115
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            + H+ +    IHRD+K  NIL+ +    K+ DFG A++  G  D  D
Sbjct: 116 NFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI D+G+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    K+G+G FG V+ G     Q++ A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++  +  +I EY+   S      D L+   LD  +   I+  I +GL YLH + 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
           +   IHRD+KA+N+LL E    K++DFG+A
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVA 151

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+ +    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 49  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    + A L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 201

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGLEEFMNEVMVISKLQHRNLV 540
           F    K+G+G FG V+ G     Q++ A+K +  + +   +E+   E+ V+S+     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++  +  +I EY+   S      D L+   LD  +   I+  I +GL YLH + 
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMA 630
           +   IHRD+KA+N+LL E    K++DFG+A
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVA 166

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +   L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 28  DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 88  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE-DLYKDFLT 146
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 639 QADTG 643
               G
Sbjct: 204 XVRKG 208

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 469 PLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGL 521
           P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S    
Sbjct: 3   PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWR 580
           +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L   
Sbjct: 63  KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
               +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A+    + D  
Sbjct: 123 HVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 175
Query: 641 DTGRV 645
            TG V
Sbjct: 176 MTGYV 180

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 37/172 (21%)
Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +F+    +G GGFG V+  + + DG+   +KR+   +    E+   EV  ++KL H N+V
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 541 RLLGCCVEGEEKMLIYEYMP-------NRSLDALLF---------------DPLKKERLD 578
              GC  +G      ++Y P       +RS    LF               +  + E+LD
Sbjct: 68  HYNGCW-DG------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
                 + E I++G+ Y+H     ++I+RDLK SNI L +    KI DFG+ 
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV 169

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 20/174 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK-----RLSKAS-GQGLEEFMNEVM 529
           +   +++++  +LG G F  V   R K  G+E A K     RLS +  G   EE   EV 
Sbjct: 1   SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEG 588
           ++ +++H N++ L        + +LI E +        LFD L +KE L   +    ++ 
Sbjct: 61  ILREIRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQ 116
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
           I  G+ YLH     RI H DLK  NI LLD+ + NP+I   DFG+A KI  GN+
Sbjct: 117 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVK-----RLSKAS-GQGLEEFMNEVMVISK 533
           +++++  +LG G F  V   R K  G+E A K     RLS +  G   EE   EV ++ +
Sbjct: 12  DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRG 592
           ++H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G
Sbjct: 72  IRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 593 LLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
           + YLH     RI H DLK  NI LLD+ + NP+I   DFG+A KI  GN+
Sbjct: 128 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG-QGLEEFMNEVMVISKL 534
           +T+ + + LS  LGQG    V+ GR K  G   A+K  +  S  + ++  M E  V+ KL
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 535 QHRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            H+N+V+L     E     K+LI E+ P  SL  +L +P     L   +   ++  +  G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAK 631
           + +L  +    I+HR++K  NI+     D +   K++DFG A+
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 482 NFQLSSKLGQGGFGPVY----WGRLKDGQ--EIAVKRL-SKASGQGLEEFMNEVMVISKL 534
           N +    LG G FG V     +G  K G   ++AVK L  KA     E  M+E+ ++++L
Sbjct: 46  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 535 -QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK-----------ERLDWRKR 582
             H N+V LLG C       LI+EY     L   L    +K           +RL+  + 
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 583 FNIIE---------GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            N++           +++G+ +L   S    +HRDL A N+L+      KI DFG+A+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 446 AKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-D 504
           A+     A ++A N+  +K +      F+      + +++   +G G +G V   R +  
Sbjct: 25  AEPAHTAASVAAKNLALLKARS-----FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLT 79
Query: 505 GQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVR----LLGCCVEGEEK--MLIY 556
           GQ++A+K++  A       +  + E+ ++   +H N++     L      GE K   ++ 
Sbjct: 80  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 557 EYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           + M    L  ++    PL  E + +      +  + RGL Y+H     ++IHRDLK SN+
Sbjct: 140 DLM-ESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMHS---AQVIHRDLKPSNL 190
Query: 615 LLDEELNPKISDFGMAK 631
           L++E    KI DFGMA+
Sbjct: 191 LVNENCELKIGDFGMAR 207

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYW----GRLKDGQEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
           ++F+L   LGQG FG V+      R   G   A+K L KA+ +  +    ++   +++ +
Sbjct: 28  SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
            H  +V+L        +  LI +++  R  D  LF  L KE +  +   +F + E ++ G
Sbjct: 88  NHPFVVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALG 142
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH    L II+RDLK  NILLDEE + K++DFG++K
Sbjct: 143 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 178

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DF +A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 89  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 142
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA 168

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 160
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA 186

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHR 537
           NF++  K+G+G F  VY    L DG  +A+K++        +   + + E+ ++ +L H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLLYL 596
           N+++     +E  E  ++ E      L  ++    K++RL   R  +     +   L ++
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           H  SR R++HRD+K +N+ +      K+ D G+ + F      A +  +VGT
Sbjct: 153 H--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG-QGLEEFMNEVMVISKL 534
           +T+ + + LS  LGQG    V+ GR K  G   A+K  +  S  + ++  M E  V+ KL
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 535 QHRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            H+N+V+L     E     K+LI E+ P  SL  +L +P     L   +   ++  +  G
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAK 631
           + +L  +    I+HR++K  NI+     D +   K++DFG A+
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 138
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 83  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 136
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA 162

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 34  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 35  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 94  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 150
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 187

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 26  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 85  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 141
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 178

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   +     D +E+   ++   S        E+   E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+  +  I  G  YLHR+   R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLHRN---RV 162
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA 188

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 27  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 483 FQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKLQHRNL 539
           +QL  +LG+G F  V    ++  GQE A K ++  K S +  ++   E  +   L+H N+
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           VRL     E     LI++ +       L  D + +E        + I+ I   +L+ H+ 
Sbjct: 84  VRLHDSISEEGHHYLIFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 139
Query: 600 SRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
             + ++HRDLK  N+LL  +L     K++DFG+A    G Q
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 20/174 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK----ASGQGL--EEFMNEVM 529
           +   +++++  +LG G F  V   R K  G+E A K + K    +S +G+  EE   EV 
Sbjct: 22  SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEG 588
           ++ +++H N++ L        + +LI E +        LFD L +KE L   +    ++ 
Sbjct: 82  ILREIRHPNIITLHDIFENKTDVVLILELVSG----GELFDFLAEKESLTEDEATQFLKQ 137
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNI-LLDEEL-NPKIS--DFGMA-KIFGGNQ 637
           I  G+ YLH     RI H DLK  NI LLD+ + NP+I   DFG+A KI  GN+
Sbjct: 138 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 480 TNNFQLSSKLGQGGFGPVYWG-RLKDGQEIA-----VKRLSKASGQGLEEFMNEVMVISK 533
           T  +QL  +LG+G F  V    ++  GQE A      K+LS    Q LE    E  +   
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           L+H N+VRL     E     LI++ +       L  D + +E        + I+ I   +
Sbjct: 67  LKHPNIVRLHDSISEEGHHYLIFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
           L+ H+   + ++HR+LK  N+LL  +L     K++DFG+A    G Q
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 27  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 179

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 34  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 186

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 446 AKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-D 504
           A+     A ++A N+  +K +      F+      + +++   +G G +G V   R +  
Sbjct: 24  AEPAHTAASVAAKNLALLKARS-----FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLT 78
Query: 505 GQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVR----LLGCCVEGEEK--MLIY 556
           GQ++A+K++  A       +  + E+ ++   +H N++     L      GE K   ++ 
Sbjct: 79  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 557 EYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           + M    L  ++    PL  E + +      +  + RGL Y+H     ++IHRDLK SN+
Sbjct: 139 DLM-ESDLHQIIHSSQPLTLEHVRY-----FLYQLLRGLKYMHS---AQVIHRDLKPSNL 189
Query: 615 LLDEELNPKISDFGMAK 631
           L++E    KI DFGMA+
Sbjct: 190 LVNENCELKIGDFGMAR 206

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 185

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 29/185 (15%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +   L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK----DLYKDFLT 142
Query: 586 IEG-------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           +E        +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 143 LEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 639 QADTG 643
               G
Sbjct: 200 YVRKG 204

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 481 NNFQLSSKLGQGGFGPVYWG------RLKDGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +   L   LG+G FG V         +    + +AVK L + A+       M+E+ ++  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 534 L-QHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALL------FDPLKKERLDWRKRFNI 585
           +  H N+V LLG C + G   M+I E+    +L   L      F P K    D+    ++
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 586 IE---GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           I     +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+    + D    
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 643 G 643
           G
Sbjct: 204 G 204

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 489 LGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLGC 545
           +G+G +G V   +  ++  + +A+K++S    Q   +  + E+ ++ + +H N++ +   
Sbjct: 51  IGEGAYGMVSSAYDHVRKTR-VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRII 605
                 + +   Y+    ++  L+  LK ++L        +  I RGL Y+H  +   ++
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 606 HRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           HRDLK SN+L++   + KI DFG+A+I     D  
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHT 201

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT 181

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQ-EIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNL 539
           +Q   KLG G +G V   R K    E A+K  R +  S     + + EV V+  L H N+
Sbjct: 39  YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 540 VRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRG 592
           ++L     +     L+ E Y      D ++           R +FN      II+ +  G
Sbjct: 99  MKLYDFFEDKRNYYLVMECYKGGELFDEIIH----------RMKFNEVDAAVIIKQVLSG 148
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIFGGNQDQADTGRVVGT 648
           + YLH+ +   I+HRDLK  N+LL+ +      KI DFG++ +F   ++Q      +GT
Sbjct: 149 VTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGT 201

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKD----GQ----EIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
            +  LGQG F  ++ G  ++    GQ    E+ +K L KA     E F     ++SKL H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++LV   G CV G+E +L+ E++   SLD  L        + W  +  + + ++  + +L
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 597 HRDSRLRIIHRDLKASNILLDEEL-----NP---KISDFGMA 630
             ++   +IH ++ A NILL  E      NP   K+SD G++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT 181

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 49  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 201

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLS-KASGQGL-EEFMNEVMVISKLQHRNL 539
           ++   K+G+G +G V+  + ++  EI A+KR+      +G+    + E+ ++ +L+H+N+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           VRL       ++  L++E+  ++ L    FD    + LD     + +  + +GL + H  
Sbjct: 64  VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           SR  ++HRDLK  N+L++     K+++FG+A+ FG
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 37  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 97  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 153
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 189

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++ + +H N++ +  
Sbjct: 29  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 145
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 181

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 487 SKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
           + +G G +G V      + G+++A+K+LS+     +  +    E++++  +QH N++ LL
Sbjct: 48  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 544 GCCVEGEEKMLIYEY---MP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
                       Y++   MP     L  ++     +E++ +     ++  + +GL Y+H 
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHS 162
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
                ++HRDLK  N+ ++E+   KI DFG+A+    + D   TG VV
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV 203

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 479 ATNNFQLSSK---LGQGGFGPVY-WGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL 534
           A N+F   SK   LG G FG V+       G ++A K +     +  EE  NE+ V+++L
Sbjct: 84  AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII--EGISRG 592
            H NL++L        + +L+ EY+        LFD +  E  +  +   I+  + I  G
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDG----GELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 593 LLYLHRDSRLRIIHRDLKASNILL--DEELNPKISDFGMAKIF 633
           + ++H   ++ I+H DLK  NIL    +    KI DFG+A+ +
Sbjct: 200 IRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              ++   +G+G FG V   + +  +++A+K++   S +  + F+ E+  +S++ H N+V
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C+      L+ EY    SL  +L               +     S+G+ YLH   
Sbjct: 66  KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMA 630
              +IHRDLK  N+LL       KI DFG A
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG-QEIAVKRLSKASGQGLE--EFMNEVMVISKLQHR 537
           +N+++   +G+G +G VY    K+  + +A+K++++     ++    + E+ ++++L+  
Sbjct: 28  DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 538 NLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
            ++RL    +  +    +++ I   + +  L  L   P+    L  +    I+  +  G 
Sbjct: 88  YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLGE 144
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            ++H      IIHRDLK +N LL+++ + KI DFG+A+    ++D
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G +G V   Y  RL+  Q++AVK+LS+   S         E+ ++  L+H N++ LL
Sbjct: 36  VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                        E Y+    + A L + +K + L       ++  + RGL Y+H     
Sbjct: 94  DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            IIHRDLK SN+ ++E+   +I DFG+A+      D+  TG V 
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA 190

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 487 SKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
           + +G G +G V      + G+++A+K+LS+     +  +    E++++  +QH N++ LL
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 544 GCCVEGEEKMLIYEY---MP--NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
                       Y++   MP     L  ++     +E++ +     ++  + +GL Y+H 
Sbjct: 90  DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS 144
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
                ++HRDLK  N+ ++E+   KI DFG+A+    + D   TG VV
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVV 185

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI  FG+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKAS---GQGLEEFMNEVMVISK-L 534
           ++F     +G+G FG V   R K  +E+  AVK L K +    +  +  M+E  V+ K +
Sbjct: 38  SDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
           +H  LV L       ++   + +Y+    L    F  L++ER  L+ R RF   E I+  
Sbjct: 97  KHPFLVGLHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAE-IASA 151
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L YLH    L I++RDLK  NILLD + +  ++DFG+ K
Sbjct: 152 LGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A+K++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              ++   +G+G FG V   + +  +++A+K++   S +  + F+ E+  +S++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C+      L+ EY    SL  +L               +     S+G+ YLH   
Sbjct: 65  KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMA 630
              +IHRDLK  N+LL       KI DFG A
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 487 SKLGQGGFGPV--YWGRLKDGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLL 543
           S +G+G +G V   +  L +   +A++++S    Q   +  + E+ ++ + +H N++ + 
Sbjct: 33  SYIGEGAYGMVCSAYDNL-NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
                   + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           ++HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 185

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI D G+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
           + T+ +QL   +G+G F  V    +L  G E A K ++  K S +  ++   E  +   L
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N+VRL     E     L+++ +       L  D + +E        + I+ I   +L
Sbjct: 61  KHSNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
           + H+   + ++HRDLK  N+LL  +      K++DFG+A    G+Q
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++   +H N++ +  
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT 183

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 521 LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
           +E+   E+ ++ KL H N+V+L+    +  E  L Y      +   ++  P  K   + +
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL-YMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            RF   + + +G+ YLH     +IIHRD+K SN+L+ E+ + KI+DFG++  F G+   A
Sbjct: 139 ARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS--DA 192
Query: 641 DTGRVVGT 648
                VGT
Sbjct: 193 LLSNTVGT 200

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G +G V   Y  RL+  Q++AVK+LS+   S         E+ ++  L+H N++ LL
Sbjct: 28  VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                        E Y+    + A L + +K + L       ++  + RGL Y+H     
Sbjct: 86  DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 143
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            IIHRDLK SN+ ++E+   +I DFG+A+      D+  TG V 
Sbjct: 144 -IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVA 182

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMV 530
           ++     +F+L   LG+G FG V+    K   Q  A+K L K        +E  M E  V
Sbjct: 12  QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 531 ISKLQHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           +S       +  + C  + +E +  + EY+    L   ++      + D  +       I
Sbjct: 72  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 128
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             GL +LH      I++RDLK  NILLD++ + KI+DFGM K
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
           +V+ +++  N   +    LP     E     N       LG G FG V     +G +K  
Sbjct: 10  KVVEEINGNNXVXIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 67
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
               +AVK L  ++     E  M+E+ V+S L  H N+V LLG C  G   ++I EY   
Sbjct: 68  AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 127
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                         + +++  A++ D      L+    F+    +++G+ +L   +    
Sbjct: 128 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 182
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
           IHRDL A NILL      KI DFG+A+
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLAR 209

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 172

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI D G+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 466 QDLPLFQFEELATAT----NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SG 518
           Q+ P F  +EL          +Q  S +G G +G V      K G  +AVK+LS+   S 
Sbjct: 3   QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERL 577
              +    E+ ++  ++H N++ LL             + Y+    + A L + +K ++L
Sbjct: 63  IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI D G+A+    + 
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR----HT 175
Query: 638 DQADTGRV 645
           D   TG V
Sbjct: 176 DDEMTGYV 183

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 481 NNFQLSSKLGQGGFGPVY----WGRLKD--GQEIAVKRLSKASG-QGLEEFMNEVMVISK 533
           N       LG G FG V     +G +K      +AVK L  ++     E  M+E+ V+S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEY-----------------MPNRSLDALLFDPLKKE 575
           L  H N+V LLG C  G   ++I EY                 + +++  A++ D     
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 576 RLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            L+    F+    +++G+ +L   +    IHRDL A NILL      KI DFG+A+
Sbjct: 143 DLEDLLSFSY--QVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR 193

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T  +   L   +G+G +G V+ G  + G+ +AVK  S    +      E  N VM    L
Sbjct: 5   TVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +   +          LI  Y    SL    +D L+   LD      I+  I+
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 115
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            GL +LH        +  I HRDLK+ NIL+ +     I+D G+A +   + +Q D G
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +    L    FD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
           +V+ +++  N   +    LP     E     N       LG G FG V     +G +K  
Sbjct: 17  KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
               +AVK L  ++     E  M+E+ V+S L  H N+V LLG C  G   ++I EY   
Sbjct: 75  AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                         + +++  A++ D      L+    F+    +++G+ +L   +    
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 189
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
           IHRDL A NILL      KI DFG+A+
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR 216

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISKLQ 535
           ++ +Q   KLG G +G V   + K  G E A+K + K+S          ++EV V+ +L 
Sbjct: 20  SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 536 HRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           H N+++L     +     L+ E Y      D ++     +++        I++ +  G  
Sbjct: 80  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSGTT 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
           YLH+ +   I+HRDLK  N+LL+ +      KI DFG++  F
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR-----LKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R     L+   +   KR +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +    L    FD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
            IAK SA     V  +  PL +  ++       +   +   LG+GGF   Y     D +E
Sbjct: 9   AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
           +   ++   S        E+   E+ +   L + ++V   G   + +   ++ E    RS
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
           L  L     +K   +   R+ + + I +G+ YLH +   R+IHRDLK  N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
           I DFG+A
Sbjct: 183 IGDFGLA 189

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T   +  L   +G+G +G V+ G  + G+ +AVK  S    +      E  N VM    L
Sbjct: 5   TVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +   +          LI  Y    SL    +D L+   LD      I+  I+
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 115
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            GL +LH        +  I HRDLK+ NIL+ +     I+D G+A +   + +Q D G
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
           +V+ +++  N   +    LP     E     N       LG G FG V     +G +K  
Sbjct: 17  KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 74
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
               +AVK L  ++     E  M+E+ V+S L  H N+V LLG C  G   ++I EY   
Sbjct: 75  AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 134
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                         + +++  A++ D      L+    F+    +++G+ +L   +    
Sbjct: 135 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 189
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
           IHRDL A NILL      KI DFG+A+
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR 216

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR-----LKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R     L+   +   KR +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +    L    FD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE---FMNEVMVISKLQ 535
           ++ +Q   KLG G +G V   + K  G E A+K + K+S          ++EV V+ +L 
Sbjct: 3   SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 536 HRNLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFN------IIEG 588
           H N+++L     +     L+ E Y      D ++           R++F+      I++ 
Sbjct: 63  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----------RQKFSEVDAAVIMKQ 112
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIF 633
           +  G  YLH+ +   I+HRDLK  N+LL+ +      KI DFG++  F
Sbjct: 113 VLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
            IAK SA     V  +  PL +  ++       +   +   LG+GGF   Y     D +E
Sbjct: 9   AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
           +   ++   S        E+   E+ +   L + ++V   G   + +   ++ E    RS
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
           L  L     +K   +   R+ + + I +G+ YLH +   R+IHRDLK  N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
           I DFG+A
Sbjct: 183 IGDFGLA 189

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +G G +G V   Y  RL+  Q++AVK+LS+   S         E+ ++  L+H N++ LL
Sbjct: 36  VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 544 GCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                        E Y+    + A L + +K + L       ++  + RGL Y+H     
Sbjct: 94  DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            IIHRDLK SN+ ++E+   +I DFG+A+      D+  TG V 
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA 190

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 451 VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK---LGQGGFGPVYWGRLKDGQE 507
            IAK SA     V  +  PL +  ++       +   +   LG+GGF   Y     D +E
Sbjct: 9   AIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKE 68
Query: 508 IAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRS 563
           +   ++   S        E+   E+ +   L + ++V   G   + +   ++ E    RS
Sbjct: 69  VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
           L  L     +K   +   R+ + + I +G+ YLH +   R+IHRDLK  N+ L+++++ K
Sbjct: 129 L--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVK 182
Query: 624 ISDFGMA 630
           I DFG+A
Sbjct: 183 IGDFGLA 189

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 450 EVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVY----WGRLKD- 504
           +V+ +++  N   +    LP     E     N       LG G FG V     +G +K  
Sbjct: 12  KVVEEINGNNYVYIDPTQLPYDHKWEFPR--NRLSFGKTLGAGAFGKVVEATAYGLIKSD 69
Query: 505 -GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY--- 558
               +AVK L  ++     E  M+E+ V+S L  H N+V LLG C  G   ++I EY   
Sbjct: 70  AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY 129
Query: 559 --------------MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                         + +++  A++ D      L+    F+    +++G+ +L   +    
Sbjct: 130 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY--QVAKGMAFLASKN---C 184
Query: 605 IHRDLKASNILLDEELNPKISDFGMAK 631
           IHRDL A NILL      KI DFG+A+
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLAR 211

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 487 SKLGQGGFGPVYWGRLKDGQ-EIAVKRLSKASGQGL-EEFMNEVMVISKLQHRNLVRLLG 544
           S +G+G +G V        +  +A+K++S    Q   +  + E+ ++   +H N++ +  
Sbjct: 31  SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
                  + +   Y+    ++  L+  LK + L        +  I RGL Y+H  +   +
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           +HRDLK SN+LL+   + KI DFG+A++   + D  
Sbjct: 148 LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT 183

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++  K S +  ++   E  +  KLQH
Sbjct: 4   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N+VRL     E     L+++ +       L  D + +E        + I+ I   + Y 
Sbjct: 64  PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
           H +    I+HR+LK  N+LL  +      K++DFG+A
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++  K S +  ++   E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N+VRL     E     L+++ +       L  D + +E        + I+ I   + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGE---LFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
           H +    I+HR+LK  N+LL  +      K++DFG+A
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++  K S +  ++   E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N+VRL     E     L+++ +       L  D + +E        + I+ I   + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTG---GELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
           H +    I+HR+LK  N+LL  +      K++DFG+A
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G +G V+ G  + G+ +AVK  S    +      E  N VM    L
Sbjct: 34  TVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----L 88
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +   +          LI  Y    SL    +D L+   LD      I+  I+
Sbjct: 89  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIA 144
Query: 591 RGLLYLH-----RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            GL +LH        +  I HRDLK+ NIL+ +     I+D G+A +   + +Q D G
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 202

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK----RLSKASGQGL--EEFMNEVMVISKLQ 535
           +    +LG G F  V   R K  G + A K    R +K+S +G+  E+   EV ++ ++Q
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLL 594
           H N++ L        + +LI E +        LFD L +KE L   +    ++ I  G+ 
Sbjct: 73  HPNVITLHEVYENKTDVILIGELVAG----GELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMA-KIFGGNQ 637
           YLH    L+I H DLK  NI+L +   P    KI DFG+A KI  GN+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 483 FQLSSKL-GQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNL 539
           ++L+S+L G+G +  V     L++G+E AVK + K +G        EV  + + Q ++N+
Sbjct: 14  YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           + L+    +     L++E +   S+ A +    K++  + R+   ++  ++  L +LH  
Sbjct: 74  LELIEFFEDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 600 SRLRIIHRDLKASNILLD--EELNP-KISDFGMA 630
               I HRDLK  NIL +  E+++P KI DF + 
Sbjct: 131 G---IAHRDLKPENILCESPEKVSPVKICDFDLG 161

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++  K S +  ++   E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N+VRL     E     L+++ +       L  D + +E        + I+ I   + Y 
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTG---GELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 597 HRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA 630
           H +    I+HR+LK  N+LL  +      K++DFG+A
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +        F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMV 530
           ++     +F L   LG+G FG V+    K   Q  A+K L K        +E  M E  V
Sbjct: 11  QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 531 ISKLQHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           +S       +  + C  + +E +  + EY+    L   ++      + D  +       I
Sbjct: 71  LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 127
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             GL +LH      I++RDLK  NILLD++ + KI+DFGM K
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
           +   A  +  L+  LG+G FG VY G   + +     +AVK   K  +    E+FM+E +
Sbjct: 2   QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           ++  L H ++V+L+G  +E E   +I E  P   L   L     K  L           I
Sbjct: 62  IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 118
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            + + YL     +  +HRD+   NIL+      K+ DFG+++
Sbjct: 119 CKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSR 157

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 168
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 169 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR----LKDGQEIAVKRLSKA----SGQGLEEFMNEVMVISKL 534
           F+L   LG+GG+G V+  R       G+  A+K L KA    + +       E  ++ ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRG 592
           +H  +V L+     G +  LI EY+    L    F  L++E +       F + E IS  
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH+     II+RDLK  NI+L+ + + K++DFG+ K
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
           + T+ +QL  +LG+G F  V    ++  GQE A K ++  K S +  ++   E  +   L
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N+VRL     E     L+++ +       L  D + +E        + I+ I   + 
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFGGNQ 637
           + H +    I+HRDLK  N+LL  +      K++DFG+A    G+Q
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
           +   A  +  L+  LG+G FG VY G   + +     +AVK   K  +    E+FM+E +
Sbjct: 6   QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           ++  L H ++V+L+G  +E E   +I E  P   L   L     K  L           I
Sbjct: 66  IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 122
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            + + YL     +  +HRD+   NIL+      K+ DFG+++
Sbjct: 123 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 161

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK 581
           +E + E  V+ +L +  +VR++G C E E  ML+ E      L+  L    +   +  + 
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 470
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              ++  +S G+ YL   +    +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGR----LKDGQEIAVKRLSKA----SGQGLEEFMNEVMVISKL 534
           F+L   LG+GG+G V+  R       G+  A+K L KA    + +       E  ++ ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRG 592
           +H  +V L+     G +  LI EY+    L    F  L++E +       F + E IS  
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAE-ISMA 133
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH+     II+RDLK  NI+L+ + + K++DFG+ K
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRL-LGC 545
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 546 CVEGEEKMLIY-----EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
              GE+K ++Y     +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLS--KASGQGLEEFMNEVMVISKL 534
           + T+ +QL  +LG+G F  V    ++  GQE A K ++  K S +  ++   E  +   L
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           +H N+VRL     E     L+++ +       L  D + +E        + I+ I   + 
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 595 YLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKIFGGNQ 637
           + H +    I+HRDLK  N+LL  +      K++DFG+A    G+Q
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 522 EEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK 581
           +E + E  V+ +L +  +VR++G C E E  ML+ E      L+  L    +   +  + 
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 471
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              ++  +S G+ YL   +    +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 525

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ----EIAVKRLSK-ASGQGLEEFMNEVM 529
           +   A  +  L+  LG+G FG VY G   + +     +AVK   K  +    E+FM+E +
Sbjct: 18  QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           ++  L H ++V+L+G  +E E   +I E  P   L   L     K  L           I
Sbjct: 78  IMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQI 134
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            + + YL     +  +HRD+   NIL+      K+ DFG+++
Sbjct: 135 CKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 173

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +        F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 178
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 179 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 474 EELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA----------------- 516
           +E     N++++   L QG F  +     KD +  A+K+  K+                 
Sbjct: 24  KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL------------ 564
                ++F NE+ +I+ +++   +   G     +E  +IYEYM N S+            
Sbjct: 83  IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI 624
           +   F P++  +        II+ +     Y+H +    I HRD+K SNIL+D+    K+
Sbjct: 143 NYTCFIPIQVIKC-------IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKL 193
Query: 625 SDFG 628
           SDFG
Sbjct: 194 SDFG 197

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 176
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 177 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 219
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 220 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +        F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 483 FQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLV 540
           +++  +LG GGFG V  W     G+++A+K+  +  S +  E +  E+ ++ KL H N+V
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN---------------I 585
                  +G +K+      PN   D  L      E  D RK  N               +
Sbjct: 77  SAREV-PDGLQKL-----APN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           +  IS  L YLH +   RIIHRDLK  NI+L    + L  KI D G AK
Sbjct: 128 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI----AVKRLSKAS----GQGLEEFMNEVMVIS 532
            NF+L   LG G +G V+  R   G +     A+K L KA+     +  E    E  V+ 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 533 KLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
            ++    +  L    + E K+ LI +Y+    L   L    ++ER    +    +  I  
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVL 170
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
            L +LH+   L II+RD+K  NILLD   +  ++DFG++K F  ++ +
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 88  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 145
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 146 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLE--EFMNE 527
           FQ  +     +N+ +   +G+G +G VY    K+ ++ +A+K++++     ++    + E
Sbjct: 16  FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILRE 75
Query: 528 VMVISKLQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDP--LKKERLDWRK 581
           + ++++L+   ++RL    +  +    +++ I   + +  L  L   P  L +E +    
Sbjct: 76  ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK--- 132
Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
              I+  +  G  ++H      IIHRDLK +N LL+++ + K+ DFG+A+     +D
Sbjct: 133 --TILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 483 FQLSSKLGQGGFGPVY-WGRLKDGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLV 540
           +++  +LG GGFG V  W     G+++A+K+  +  S +  E +  E+ ++ KL H N+V
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN---------------I 585
                  +G +K+      PN   D  L      E  D RK  N               +
Sbjct: 76  SAREV-PDGLQKL-----APN---DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           +  IS  L YLH +   RIIHRDLK  NI+L    + L  KI D G AK
Sbjct: 127 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 32  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 92  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 145
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 180

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 94  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 94  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 147
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 182

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKD----GQ----EIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
            +  LGQG F  ++ G  ++    GQ    E+ +K L KA     E F     ++SKL H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++LV   G C  G+E +L+ E++   SLD  L        + W  +  + + ++  + +L
Sbjct: 72  KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 597 HRDSRLRIIHRDLKASNILLDEEL-----NP---KISDFGMA 630
             ++   +IH ++ A NILL  E      NP   K+SD G++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 473 FEELATAT---NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLS--KASGQGLEEFMN 526
           F+ +AT T   +++QL  +LG+G F  V     K   QE A K ++  K S +  ++   
Sbjct: 20  FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           E  +   L+H N+VRL     E     L+++ +       L  D + +E        + I
Sbjct: 80  EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG---GELFEDIVAREYYSEADASHCI 136
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFGGNQ 637
             I   + ++H+     I+HRDLK  N+LL  +      K++DFG+A    G Q
Sbjct: 137 HQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 127
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 162

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
           + F+L   LGQG FG V+  +   G    Q  A+K L KA+ +  +    ++   ++ ++
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK--RFNIIEGISRG 592
            H  +V+L        +  LI +++  R  D  LF  L KE +   +  +F + E ++  
Sbjct: 84  NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH    L II+RDLK  NILLDEE + K++DFG++K
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 96  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 153
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 154 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 78  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 91  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 148
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 149 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 12  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 72  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 125
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 160

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 159
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 160 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 78  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 131
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 166

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 95  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGL-EEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +  + +    +    ++A+   L +E + E  V+ +L +  +VR+
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL   +  
Sbjct: 84  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEESN-- 137
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 488 KLGQGGFG-PVYWGRLKDGQEIAVKRL--SKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           K+G+G FG  +     +DG++  +K +  S+ S +  EE   EV V++ ++H N+V+   
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 545 CCVEGEEKMLIYEYMPNRSL-------DALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
              E     ++ +Y     L         +LF   + + LDW         I   L ++H
Sbjct: 91  SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ--EDQILDW------FVQICLALKHVH 142
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
                +I+HRD+K+ NI L ++   ++ DFG+A++     + A
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 87  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 144
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 145 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 84  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 141
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 142 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 95  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCC 546
           +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H N+VRL    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 547 VEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
               EK       L+ +Y+P             K+ L        +  + R L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 601 RLRIIHRDLKASNILLDEELNP-KISDFGMAK 631
              I HRD+K  N+LLD +    K+ DFG AK
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
            +F L   +G+G +  V   RLK    I   R+ K       + ++    E  V  +  +
Sbjct: 52  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
              +  L  C + E ++  + EY+    L   +F   ++ +L +   RF   E IS  L 
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 167
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           YLH      II+RDLK  N+LLD E + K++D+GM K
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           ++ F++ S+LG+G    VY  + K  Q+  A+K L K   + +     E+ V+ +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHPN 109
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLH 597
           +++L        E  L+ E +    L    FD + +K     R   + ++ I   + YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 598 RDSRLRIIHRDLKASNILL-----DEELNPKISDFGMAKI 632
            +    I+HRDLK  N+L      D  L  KI+DFG++KI
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPL--KIADFGLSKI 200

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
           + F+L   LGQG FG V+  +   G    Q  A+K L KA+ +  +    ++   ++ ++
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
            H  +V+L        +  LI +++  R  D  LF  L KE +  +   +F + E ++  
Sbjct: 84  NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH    L II+RDLK  NILLDEE + K++DFG++K
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 174

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKASGQGLEEFMNEVM--VISKL 534
           + F+L   LGQG FG V+  +   G    Q  A+K L KA+ +  +    ++   ++ ++
Sbjct: 25  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK--RFNIIEGISRG 592
            H  +V+L        +  LI +++  R  D  LF  L KE +   +  +F + E ++  
Sbjct: 85  NHPFIVKLHYAFQTEGKLYLILDFL--RGGD--LFTRLSKEVMFTEEDVKFYLAE-LALA 139
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L +LH    L II+RDLK  NILLDEE + K++DFG++K
Sbjct: 140 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK 175

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRN 538
            +F+    LG+GGFG V+  + K D    A+KR+   + +   E+ M EV  ++KL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DW---------RKR---FNI 585
           +VR     +E      +    P   L  +     +KE L DW         R+R    +I
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYL-YIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
              I+  + +LH      ++HRDLK SNI    +   K+ DFG+      ++++
Sbjct: 124 FLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 454 KLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKR 512
           K  + N++ VKL D               F     LG+G FG V     K  +E+ A+K 
Sbjct: 7   KQPSNNLDRVKLTD---------------FNFLMVLGKGSFGKVMLADRKGTEELYAIKI 51
Query: 513 LSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALL 568
           L K        +E  M E  V++ L     +  L  C +  +++  + EY+    L   +
Sbjct: 52  LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---M 108
Query: 569 FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
           +   +  +    +       IS GL +LH+     II+RDLK  N++LD E + KI+DFG
Sbjct: 109 YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFG 165
Query: 629 MAK 631
           M K
Sbjct: 166 MCK 168

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
           +++FQL S LG+G +G V     K  G+ +A+K++            + E+ ++   +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           N++ +             E  +I E M       +    L  + + +      I    R 
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  LH  +   +IHRDLK SN+L++   + K+ DFG+A+I   ++  AD     G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
           +++FQL S LG+G +G V     K  G+ +A+K++            + E+ ++   +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           N++ +             E  +I E M       +    L  + + +      I    R 
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  LH  +   +IHRDLK SN+L++   + K+ DFG+A+I   ++  AD     G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHR 537
           +++FQL S LG+G +G V     K  G+ +A+K++            + E+ ++   +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 538 NLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           N++ +             E  +I E M       +    L  + + +      I    R 
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  LH  +   +IHRDLK SN+L++   + K+ DFG+A+I   ++  AD     G
Sbjct: 125 VKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTG 174

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGF   Y     D +E+   ++   S        E+   E+ +   L + ++V   G
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI 604
              + +   ++ E    RSL  L     +K   +   R+ + + I +G+ YLH +   R+
Sbjct: 94  FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 605 IHRDLKASNILLDEELNPKISDFGMA 630
           IHRDLK  N+ L+++++ KI DFG+A
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA 173

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 489 LGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG G F  V+  + +  G+  A+K + K+         NE+ V+ K++H N+V L     
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN-IIEGISRGLLYLHRDSRLRIIH 606
                 L+ + +        LFD + +  +   K  + +I+ +   + YLH +    I+H
Sbjct: 77  STTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVH 129
Query: 607 RDLKASNIL-LDEELNPK--ISDFGMAKI 632
           RDLK  N+L L  E N K  I+DFG++K+
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM 158

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 23/171 (13%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVM 529
           FQ   +     ++    KLG+GGF  V     L DG   A+KR+     Q  EE   E  
Sbjct: 19  FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD 78
Query: 530 VISKLQHRNLVRLLGCCVE----GEEKMLIYEYMPNRSL--------DALLFDPLKKERL 577
           +     H N++RL+  C+       E  L+  +    +L        D   F  L ++++
Sbjct: 79  MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQI 136
Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            W     ++ GI RGL  +H        HRDLK +NILL +E  P + D G
Sbjct: 137 LW-----LLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLG 179

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR 537
           +++ +  +LG G FG V+  R+ +   G   A K +        E    E+  +S L+H 
Sbjct: 157 DHYDIHEELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
            LV L     +  E ++IYE+M    L   + D   K   D  +    +  + +GL ++H
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMH 272
Query: 598 RDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
            ++    +H DLK  NI+   + +   K+ DFG+       Q
Sbjct: 273 ENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 473 FEELATATNNFQLSSK-LGQGGFGPVYWGRLKD-GQEIAVKRLSKAS-GQGLE-EFMNEV 528
           F+ +    N + L+SK LG+G F  V     K  GQE A K L K   GQ    E ++E+
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 529 MVISKLQH-RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
            V+   +    ++ L        E +LI EY     + +L   P   E +       +I+
Sbjct: 80  AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCL-PELAEMVSENDVIRLIK 138
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFG 634
            I  G+ YLH+++   I+H DLK  NILL   + P    KI DFGM++  G
Sbjct: 139 QILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIG 185

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
            +F L   +G+G +  V   RLK    I   ++ K       + ++    E  V  +  +
Sbjct: 20  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
              +  L  C + E ++  + EY+    L   +F   ++ +L +   RF   E IS  L 
Sbjct: 80  HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 135
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           YLH      II+RDLK  N+LLD E + K++D+GM K
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
            +F L   +G+G +  V   RLK    I   ++ K       + ++    E  V  +  +
Sbjct: 5   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
              +  L  C + E ++  + EY+    L   +F   ++ +L +   RF   E IS  L 
Sbjct: 65  HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 120
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           YLH      II+RDLK  N+LLD E + K++D+GM K
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
            +F L   +G+G +  V   RLK    I   ++ K       + ++    E  V  +  +
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 537 RNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDPLKKERL-DWRKRFNIIEGISRGLL 594
              +  L  C + E ++  + EY+    L   +F   ++ +L +   RF   E IS  L 
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           YLH      II+RDLK  N+LLD E + K++D+GM K
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY     L    F  L +ER+  + R RF   E +S  L 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 168

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 8   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 68  PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 122
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 123 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGT 171

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 481 NNFQLSSKLGQGGFGPVYW-GRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           +++ +  +LG G FG V+       G   A K +        E    E+  +S L+H  L
Sbjct: 51  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V L     +  E ++IYE+M    L   + D   K   D  +    +  + +GL ++H +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 168
Query: 600 SRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
           +    +H DLK  NI+   + +   K+ DFG+       Q
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L   + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
            + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++
Sbjct: 79  XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 133 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQ 535
           T  + F    KLG G FG V+    +  G E  +K ++K   Q  +E+   E+ V+  L 
Sbjct: 19  TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           H N++++     +     ++ E       L+ ++    + + L       +++ +   L 
Sbjct: 79  HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTG 643
           Y H      ++H+DLK  NIL  ++ +P    KI DFG+A++F  ++   +  
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAA 187

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           N F+    LG+G FG V   + K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 8   NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 68  PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 122
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH  S   +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 123 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           N F+    LG+G FG V   + K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 262
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH  S   +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 263 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           N F+    LG+G FG V   + K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 10  NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 70  PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH  S   +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 125 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           N F+    LG+G FG V   + K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 9   NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 69  PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 123
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH  S   +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 124 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           N F+    LG+G FG V   + K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANG----GELFFHLSRERVFSEDRARFYGAEIVS-ALD 265
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH  S   +++RDLK  N++LD++ + KI+DFG+ K   G +D A      GT
Sbjct: 266 YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY         LF  L +ER+  + R RF   E +S  L 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANG----GELFFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 21/178 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G +G V W  L  G+ +AVK  S    Q      E  N V+    L
Sbjct: 5   TVARQVALVECVGKGRYGEV-WRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL----L 59
Query: 535 QHRNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +   +          LI  Y  + SL    +D L+++ L+      +    +
Sbjct: 60  RHDNILGFIASDMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAA 115
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            GL +LH +      +  I HRD K+ N+L+   L   I+D G+A +     D  D G
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 10  NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY     L    F  L +ER+  + R RF   E +S  L 
Sbjct: 70  PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 124
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 125 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 173

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             L  L       +    + EY     L    F  L +ER+  + R RF   E +S  L 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAEIVS-ALE 119
Query: 595 YLH-RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH RD    +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT
Sbjct: 120 YLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGT 168

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
           L +GGF  VY  + +  G+E A+KRL     +     + EV  + KL  H N+V+     
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 547 VEGEEK-------MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
             G+E+        L+   +    L   L     +  L       I     R + ++HR 
Sbjct: 96  SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            +  IIHRDLK  N+LL  +   K+ DFG A       D
Sbjct: 156 -KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 11  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 55
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 56  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 116 VPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 167
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 168 DQQGYIQVTDFGFAKRVKG 186

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
           DLP+         ++ ++L   +G G FG     R K   E +AVK + +  G+ ++E  
Sbjct: 11  DLPIMH------DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
             E++    L+H N+VR     +      ++ EY     L   + +  +    + R  F 
Sbjct: 63  KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
            +I G+S    Y H    +++ HRDLK  N LLD    P  KI+DFG +K
Sbjct: 123 QLISGVS----YAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
           E AVK + K+     EE     +++   QH N++ L     +G+   L+ E M       
Sbjct: 54  EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG---GE 107
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
           LL   L+++    R+   ++  I + + YLH      ++HRDLK SNIL +DE  NP   
Sbjct: 108 LLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 623 KISDFGMAK 631
           +I DFG AK
Sbjct: 165 RICDFGFAK 173

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 40  IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 100 HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    +G G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EYMP   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   K++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 11  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 55
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 56  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 115
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 116 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 167
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 168 DQQGYIQVTDFGFAKRVKG 186

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 489 LGQGGFGPV---YWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRNLVRLL 543
           +G G +G V     GR   G ++A+K+L +     L  +    E+ ++  ++H N++ LL
Sbjct: 33  VGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 544 GCCVEGE---EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
                 E   +    Y  MP    D  L   +K E+L   +   ++  + +GL Y+H   
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFMGTD--LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAK 631
              IIHRDLK  N+ ++E+   KI DFG+A+
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR 176

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    +G G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EYMP   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   K++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+D +++AVK L     +       F  E    + L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA-DTGRVVGT 648
            L + H++    IIHRD+K +NIL+      K+ DFG+A+    + +    T  V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 73  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLLY 126
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 127 QMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 170

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 12  IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 72  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 12  IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 72  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 17  IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 77  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
           E AVK + K+     EE     +++   QH N++ L     +G+   L+ E M       
Sbjct: 54  EYAVKVIDKSKRDPSEEIE---ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRG---GE 107
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
           LL   L+++    R+   ++  I + + YLH      ++HRDLK SNIL +DE  NP   
Sbjct: 108 LLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECL 164
Query: 623 KISDFGMAK 631
           +I DFG AK
Sbjct: 165 RICDFGFAK 173

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 14  IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 74  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 15  IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 75  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L   + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
            + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++
Sbjct: 79  CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 133 YQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 9   IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 69  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
            P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+++
Sbjct: 124 APGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLMI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   K++DFG AK   G
Sbjct: 176 DQQGYIKVTDFGFAKRVKG 194

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
            E      N F+    LG+GGFG V        G++   +++  KR+ K  G+ +   +N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           E  ++ K+  R +V L       +   L+   M    L   ++   +    + R  F   
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           E I  GL  LHR+   RI++RDLK  NILLD+  + +ISD G+A
Sbjct: 294 E-ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 39  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 84  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 144 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
           DLP+         ++ ++L   +G G FG     R K   E +AVK + +  G+ ++E  
Sbjct: 10  DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 61
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
             E++    L+H N+VR     +      ++ EY     L   + +  +    + R  F 
Sbjct: 62  KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
            +I G+S    Y H    +++ HRDLK  N LLD    P  KI DFG +K
Sbjct: 122 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + K+ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P       +F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + K+ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P       +F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPV------YWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
            E      N F+    LG+GGFG V        G++   +++  KR+ K  G+ +   +N
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LN 233
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           E  ++ K+  R +V L       +   L+   M    L   ++   +    + R  F   
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           E I  GL  LHR+   RI++RDLK  NILLD+  + +ISD G+A
Sbjct: 294 E-ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+D +++AVK L     +       F  E    + L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
            L + H++    IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + K+ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H 
Sbjct: 12  IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 72  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMV 530
           F+ ++     + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 531 ISKLQHRN--LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--N 584
           ++KLQ  +  ++RL    +  +   ++ E   N  L++ L    KK+ +D W RK +  N
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++E +       H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  
Sbjct: 136 MLEAV-------HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTS 182
Query: 645 VV 646
           VV
Sbjct: 183 VV 184

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+D +++AVK L     +       F  E    + L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
            L + H++    IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K     L+E    +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG+AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           T+ +++   +G G +        K    E AVK + K+     EE     +++   QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++ L     +G+   ++ E M       LL   L+++    R+   ++  I++ + YLH 
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKG---GELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 599 DSRLRIIHRDLKASNIL-LDEELNP---KISDFGMAK 631
                ++HRDLK SNIL +DE  NP   +I DFG AK
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGL-EEFMNEVMVISKLQHR 537
            +L   +G+G FG V+ G           +A+K     +   + E+F+ E + + +  H 
Sbjct: 12  IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++V+L+G   E     +I E      L + L   ++K  LD          +S  L YL 
Sbjct: 72  HIVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                R +HRD+ A N+L+      K+ DFG+++
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSR 159

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
           N+F +   +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +  
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
            +   +  +       +K+  I + M    L   L         D R  F   E I  GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
           N+F +   +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +  
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
            +   +  +       +K+  I + M    L   L         D R  F   E I  GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
           N+F +   +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +  
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
            +   +  +       +K+  I + M    L   L         D R  F   E I  GL
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 304
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 305 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 351

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
           N+F +   +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +  
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 537 RN--LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
            +   +  +       +K+  I + M    L   L         D R  F   E I  GL
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR--FYAAE-IILGL 305
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++H  +R  +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 306 EHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 352

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 171
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL 534
           T    +Q    +G G  G V        G  +AVK+LS+   +    +    E++++  +
Sbjct: 19  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 535 QHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            H+N++ LL          E ++  L+ E M + +L  ++   L  ER+ +     ++  
Sbjct: 79  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQ 132
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
           +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+    N
Sbjct: 133 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNLVRLLGCCV 547
           +G G FG V+  +L +  E+A+K++ +      + F N E+ ++  ++H N+V L     
Sbjct: 48  IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 548 EGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
              +K       L+ EY+P     A       K+ +        +  + R L Y+H    
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 602 LRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
           + I HRD+K  N+LLD      K+ DFG AKI 
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 171
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 172 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 476 LATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS--GQGLEEFMNEVMVIS 532
           L     ++ +   +G+G FG V   R K  Q++ A+K LSK     +    F  E   I 
Sbjct: 70  LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 533 KLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
              +   V  L C  + ++ + ++ EYMP   L  L+ +    E+  W K +      + 
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--WAKFYT-----AE 182
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            +L L     + +IHRD+K  N+LLD+  + K++DFG
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 133
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 134 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL 534
           T    +Q    +G G  G V        G  +AVK+LS+   +    +    E++++  +
Sbjct: 21  TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 535 QHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            H+N++ LL          E ++  L+ E M + +L  ++   L  ER+ +     ++  
Sbjct: 81  NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-----LLYQ 134
Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
           +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+    N
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 484 QLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHRN 538
           +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+L+G   E     +I E      L + L   ++K  LD          +S  L YL  
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               R +HRD+ A N+L+      K+ DFG+++
Sbjct: 510 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 81  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 134
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
           E  + EV ++ K+  H N+++L           L+++ M    L    FD L +K  L  
Sbjct: 55  EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSE 110
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           ++   I+  +   +  LH+   L I+HRDLK  NILLD+++N K++DFG +
Sbjct: 111 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 158

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
           E  + EV ++ K+  H N+++L           L+++ M        LFD L +K  L  
Sbjct: 68  EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK----GELFDYLTEKVTLSE 123
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           ++   I+  +   +  LH+   L I+HRDLK  NILLD+++N K++DFG +
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 522 EEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDW 579
           E  + EV ++ K+  H N+++L           L+++ M        LFD L +K  L  
Sbjct: 68  EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK----GELFDYLTEKVTLSE 123
Query: 580 RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           ++   I+  +   +  LH+   L I+HRDLK  NILLD+++N K++DFG +
Sbjct: 124 KETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 73  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 126
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 127 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 74  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 127
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 20  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 78
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 79  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 132
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 133 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 176

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 73
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 74  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 127
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 128 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    +G G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   K++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L   + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
            + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++
Sbjct: 79  CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLL 132
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 133 YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPV--YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISK 533
           T    +Q    +G G  G V   +  + D + +A+K+LS+   +    +    E++++  
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 534 LQHRNLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
           + H+N++ LL          E ++  L+ E M     DA L   ++ E LD  +   ++ 
Sbjct: 81  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQME-LDHERMSYLLY 134
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 135 QMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 484 QLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSKASGQGL-EEFMNEVMVISKLQHRN 538
           +L   +G+G FG V+ G     +     +A+K     +   + E+F+ E + + +  H +
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+L+G   E     +I E      L + L   ++K  LD          +S  L YL  
Sbjct: 453 IVKLIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
               R +HRD+ A N+L+      K+ DFG+++
Sbjct: 510 K---RFVHRDIAARNVLVSATDCVKLGDFGLSR 539

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 27  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 87  PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 141
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K  +   NT  L      QFE + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWESPAQNTAHLD-----QFERIRT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  +   +    LV+L     +     ++ EY
Sbjct: 64  KETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
            P   +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 124 APGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   K++DFG AK   G
Sbjct: 176 DQQGYIKVADFGFAKRVKG 194

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF---MNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K     L+E    +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   +++DFG+AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A+K +SK      S +  +  +N   E+ ++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 70  KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A+K +SK      S +  +  +N   E+ ++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 70  KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEEFM 525
           D+P+         ++ +     +G G FG     R K  +E +AVK + + +    E   
Sbjct: 12  DMPIMH------DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQ 64
Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN- 584
            E++    L+H N+VR     +      +I EY     L          ER+    RF+ 
Sbjct: 65  REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL---------YERICNAGRFSE 115
Query: 585 -----IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
                  + +  G+ Y H    ++I HRDLK  N LLD    P  KI DFG +K
Sbjct: 116 DEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A+K +SK      S +  +  +N   E+ ++
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 70  KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 129 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A+K +SK      S +  +  +N   E+ ++
Sbjct: 9   DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 69  KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 128 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 167

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 5   FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 49
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 50  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 109
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 110 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 161
Query: 617 DEELNPKISDFGMAKIFGG 635
           DE+   +++DFG AK   G
Sbjct: 162 DEQGYIQVTDFGFAKRVKG 180

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 68  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 185 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 240

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A+K +SK      S +  +  +N   E+ ++
Sbjct: 16  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 76  KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 135 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 174

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 14  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--NIIEGISRGLL 594
           ++RL    +  +   ++ E   N  L++ L    KK+ +D W RK +  N++E +     
Sbjct: 74  IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAV----- 124
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
             H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 125 --HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 168

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 73  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 129
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 23  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 81  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 137
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 179

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 26  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 83
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 84  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 140
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 182

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 462 TVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASG 518
           T KL+ +     EE+  AT+      +LG+G FG V+  R++D Q   + AVK++     
Sbjct: 78  TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---- 127
Query: 519 QGLEEF-MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER- 576
             LE F   E+M  + L    +V L G   EG    +  E +   SL  L+     KE+ 
Sbjct: 128 --LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQG 180
Query: 577 -LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA 630
            L   +    +     GL YLH  SR RI+H D+KA N+LL  +  +  + DFG A
Sbjct: 181 CLPEDRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHA 233

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-----------LEE 523
           EL    + + +   +  G +G V  G   +G  +A+KR+      G            + 
Sbjct: 16  ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
            + E+ +++   H N++ L    V  EE  +   Y+    +   L   +  +R+    + 
Sbjct: 76  VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ- 134
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +I   +   LL LH      ++HRDL   NILL +  +  I DF +A+     +D AD  
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-----EDTADAN 189
Query: 644 R 644
           +
Sbjct: 190 K 190

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 80  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 136
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-----------LEE 523
           EL    + + +   +  G +G V  G   +G  +A+KR+      G            + 
Sbjct: 16  ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
            + E+ +++   H N++ L    V  EE  +   Y+    +   L   +  +R+    + 
Sbjct: 76  VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ- 134
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +I   +   LL LH      ++HRDL   NILL +  +  I DF +A+     +D AD  
Sbjct: 135 HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-----EDTADAN 189
Query: 644 R 644
           +
Sbjct: 190 K 190

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 462 TVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ---EIAVKRLSKASG 518
           T KL+ +     EE+  AT+      +LG+G FG V+  R++D Q   + AVK++     
Sbjct: 59  TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---- 108
Query: 519 QGLEEF-MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER- 576
             LE F   E+M  + L    +V L G   EG    +  E +   SL  L+     KE+ 
Sbjct: 109 --LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQG 161
Query: 577 -LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMA 630
            L   +    +     GL YLH  SR RI+H D+KA N+LL  +  +  + DFG A
Sbjct: 162 CLPEDRALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHA 214

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 11  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
           ++RL    +  +    IY  M   ++D   +   KK    W RK +  N++E +      
Sbjct: 71  IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 121
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 122 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 165

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 507 EIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDA 566
           E AVK + K+     EE     +++   QH N++ L     +G+   ++ E         
Sbjct: 49  EFAVKIIDKSKRDPTEEIE---ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKG---GE 102
Query: 567 LLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL-LDEELNP--- 622
           LL   L+++    R+   ++  I++ + YLH      ++HRDLK SNIL +DE  NP   
Sbjct: 103 LLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 623 KISDFGMAK 631
           +I DFG AK
Sbjct: 160 RICDFGFAK 168

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 25/182 (13%)
Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMV 530
           F+ ++     + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 531 ISKLQHRN--LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--N 584
           ++KLQ  +  ++RL    +  +   ++ E   N  L++ L    KK+ +D W RK +  N
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKN 135
Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           ++E +       H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q D   
Sbjct: 136 MLEAV-------HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDXXX 182
Query: 645 VV 646
           VV
Sbjct: 183 VV 184

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             L +L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN 526
           DLP+         ++ ++L   +G G FG     R K   E+   +  +   +       
Sbjct: 11  DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKR 64
Query: 527 EVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF-NI 585
           E++    L+H N+VR     +      ++ EY     L   + +  +    + R  F  +
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
           I G+S    Y H    +++ HRDLK  N LLD    P  KI DFG +K
Sbjct: 125 ISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 10  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
           ++RL    +  +    IY  M   ++D   +   KK    W RK +  N++E +      
Sbjct: 70  IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 120
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 121 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 164

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLE--EFMNEVMVISKLQHR 537
           + +++   +G G +G V     K + + +A+K++ +     ++    + E+ ++++L H 
Sbjct: 53  DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 538 NLVRLLGCC----VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           ++V++L       VE  +++ +   + +     L   P+    L  +    ++  +  G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK---TLLYNLLVGV 169
Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            Y+H      I+HRDLK +N L++++ + K+ DFG+A+
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG 177

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 478 TATNNFQLSSKLGQGGFGPV---YWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVIS 532
           T    +Q    +G G  G V   Y   L+  + +A+K+LS+   +    +    E++++ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 533 KLQHRNLVRLLGCCVEG---EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
            + H+N++ LL         EE   +Y  M    +DA L   ++ E LD  +   ++  +
Sbjct: 79  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQME-LDHERMSYLLYQM 135
Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A++ +SK      S +  +  +N   E+ ++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 268 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-W-RKRF--NIIEGISRGLL 594
           ++RL    +  +   ++ E   N  L++ L    KK+ +D W RK +  N++E +     
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWERKSYWKNMLEAV----- 168
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
             H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 169 --HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
           ++RL    +  +    IY  M   ++D   +   KK    W RK +  N++E +      
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 168
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 169 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 9   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 69  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGT 181

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSK-----ASGQGLEEFMN---EVMVI 531
           + + +S  LG G  G V      K  +++A++ +SK      S +  +  +N   E+ ++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGIS 590
            KL H  ++++     + E+  ++ E M    L D ++ +   KE       + ++  + 
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG 634
               YLH +    IIHRDLK  N+LL   +E+   KI+DFG +KI G
Sbjct: 254 ----YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN-- 538
           + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +  
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW-RKRF--NIIEGISRGLLY 595
           ++RL    +  +    IY  M   ++D   +   KK    W RK +  N++E +      
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 168
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            H   +  I+H DLK +N L+ + +  K+ DFG+A     NQ Q DT  VV
Sbjct: 169 -HTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVV 212

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           ++ ++P F+      +  N  +S K LG G  G V +     G+ +AVKR+       L 
Sbjct: 2   RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 49
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
           +F +  ++  KL      H N++R    C E  ++ L I   + N +L  L+    +  E
Sbjct: 50  DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 107
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
            L  +K +N   ++  I+ G+ +LH    L+IIHRDLK  NIL+              E 
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 620 LNPKISDFGMAKIFGGNQDQADTG 643
           L   ISDFG+ K     Q    T 
Sbjct: 165 LRILISDFGLCKKLDSGQSSFRTN 188

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             L +L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           + L + +G+G +G V    ++ G  I  A K++ K   + ++ F  E+ ++  L H N++
Sbjct: 11  YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNIIEGISRGLLYLHR 598
           RL     +  +  L+ E          LF+ +  +R+ +R+     I++ +   + Y H 
Sbjct: 70  RLYETFEDNTDIYLVMEL----CTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH- 123
Query: 599 DSRLRIIHRDLKASNILL--DEELNP-KISDFGMAKIF 633
             +L + HRDLK  N L   D   +P K+ DFG+A  F
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             L +L     +     ++ EY P   +    F  L++     +   RF   + I     
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 156
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+++D++   K++DFG AK   G
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 13  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 57
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 58  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 117
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 118 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 169
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 170 DQQGYIQVTDFGFAKRVKG 188

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           ++ ++P F+      +  N  +S K LG G  G V +     G+ +AVKR+       L 
Sbjct: 2   RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 49
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
           +F +  ++  KL      H N++R    C E  ++ L I   + N +L  L+    +  E
Sbjct: 50  DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 107
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
            L  +K +N   ++  I+ G+ +LH    L+IIHRDLK  NIL+              E 
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164
Query: 620 LNPKISDFGMAKIFGGNQ 637
           L   ISDFG+ K     Q
Sbjct: 165 LRILISDFGLCKKLDSGQ 182

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQH 536
           ++L   +G+G F  V     ++ GQ+ AVK     + + + G   E+   E  +   L+H
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL-- 594
            ++V LL          +++E+M       L F+ +K+    +     +     R +L  
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGAD---LCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 595 --YLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIFG 634
             Y H ++   IIHRD+K  N+LL  + N    K+ DFG+A   G
Sbjct: 143 LRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFAEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 39  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 84  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 144 VAGGEM----FSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
           DLP+         ++ ++L   +G G FG     R K   E +AVK + +  G+ ++E  
Sbjct: 11  DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
             E++    L+H N+VR     +      ++ EY     L   + +  +    + R  F 
Sbjct: 63  KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQDQAD 641
            +I G+S    Y H    +++ HRDLK  N LLD    P  KI  FG +K    +    D
Sbjct: 123 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD 175
Query: 642 TGRVVGT 648
           T   VGT
Sbjct: 176 T---VGT 179

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQE-IAVKRLSKASGQGLEE-F 524
           DLP+         ++ ++L   +G G FG     R K   E +AVK + +  G+ ++E  
Sbjct: 11  DLPIMH------DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDENV 62
Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF- 583
             E++    L+H N+VR     +      ++ EY     L   + +  +    + R  F 
Sbjct: 63  KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAK 631
            +I G+S    Y H    +++ HRDLK  N LLD    P  KI  FG +K
Sbjct: 123 QLISGVS----YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI--AVKRLSKASGQGLEEFMNEV 528
           FQ          + L + +G+G +G V    ++ G  I  A K++ K   + ++ F  E+
Sbjct: 16  FQGSTKGDINQYYTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 529 MVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR--FNII 586
            ++  L H N++RL     +  +  L+ E          LF+ +  +R+ +R+     I+
Sbjct: 75  EIMKSLDHPNIIRLYETFEDNTDIYLVMEL----CTGGELFERVVHKRV-FRESDAARIM 129
Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILL--DEELNP-KISDFGMAKIF 633
           + +   + Y H   +L + HRDLK  N L   D   +P K+ DFG+A  F
Sbjct: 130 KDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH 536
           +  + + +  +LG G FG V+    K  G+    K ++           NE+ ++++L H
Sbjct: 48  SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLL 594
             L+ L     +  E +LI E++        LFD +  E  ++   +  N +     GL 
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSG----GELFDRIAAEDYKMSEAEVINYMRQACEGLK 163
Query: 595 YLHRDSRLRIIHRDLKASNILLDEEL--NPKISDFGMA 630
           ++H  S   I+H D+K  NI+ + +   + KI DFG+A
Sbjct: 164 HMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEFMN---EVMVISKLQH 536
           ++F++   +G+G FG V   +  D +++ A+K ++K       E  N   E+ ++  L+H
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             LV L     + E+  ++ + +    L   L     ++ + +++   +   I   ++ L
Sbjct: 75  PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----QQNVHFKEE-TVKLFICELVMAL 128
Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
                 RIIHRD+K  NILLDE  +  I+DF +A + 
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+  +++AVK L     +       F  E    + L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 71  HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
            L + H++    IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 39  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 83
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 84  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 144 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 195
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 196 DQQGYIQVTDFGFAKRVKG 214

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISK 533
           +T      L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    
Sbjct: 5   STIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM---- 59
Query: 534 LQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           L+H N++  +    +      +  L+ +Y  + SL    FD L +  +       +    
Sbjct: 60  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALST 115
Query: 590 SRGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
           + GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V+    K    +  ++L     +     + + E+ V+ +     
Sbjct: 25  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL  
Sbjct: 85  IVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 197

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 19  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 63
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 64  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 124 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 175
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 176 DQQGYIQVTDFGFAKRVKG 194

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           ++ ++P F+      +  N  +S K LG G  G V +     G+ +AVKR+       L 
Sbjct: 20  RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 67
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
           +F +  ++  KL      H N++R    C E  ++ L I   + N +L  L+    +  E
Sbjct: 68  DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
            L  +K +N   ++  I+ G+ +LH    L+IIHRDLK  NIL+              E 
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 620 LNPKISDFGMAKIFGGNQ 637
           L   ISDFG+ K     Q
Sbjct: 183 LRILISDFGLCKKLDSGQ 200

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
           LG+G    V     L   QE AVK + K  G        EV ++ + Q HRN++ L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
            E +   L++E M   S+ + +    K+   +  +   +++ ++  L +LH      I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 607 RDLKASNILLDE--ELNP-KISDFGMAKIFGGNQD 638
           RDLK  NIL +   +++P KI DFG+      N D
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +        +F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 464 KLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE 522
           ++ ++P F+      +  N  +S K LG G  G V +     G+ +AVKR+       L 
Sbjct: 20  RIANIPNFE-----QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-------LI 67
Query: 523 EFMNEVMVISKL-----QHRNLVRLLGCCVEGEEKML-IYEYMPNRSLDALLFDP-LKKE 575
           +F +  ++  KL      H N++R    C E  ++ L I   + N +L  L+    +  E
Sbjct: 68  DFCDIALMEIKLLTESDDHPNVIRYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 576 RLDWRKRFN---IIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EE 619
            L  +K +N   ++  I+ G+ +LH    L+IIHRDLK  NIL+              E 
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 182
Query: 620 LNPKISDFGMAKIFGGNQ 637
           L   ISDFG+ K     Q
Sbjct: 183 LRILISDFGLCKKLDSGQ 200

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--------SGQGLEEFMNEVMV 530
           +  +   S LG G FG V+    K+  +E+ VK + K             L +   E+ +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +S+++H N++++L          L+ E      LD   F   +  RLD      I   + 
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFID-RHPRLDEPLASYIFRQLV 140
Query: 591 RGLLYLHRDSRLR-IIHRDLKASNILLDEELNPKISDFGMA 630
             + YL    RL+ IIHRD+K  NI++ E+   K+ DFG A
Sbjct: 141 SAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +    +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+
Sbjct: 123 VAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLI 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    L
Sbjct: 3   TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 57
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +    +      +  L+ +Y  + SL    FD L +  +       +    +
Sbjct: 58  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 113
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    L
Sbjct: 1   TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 55
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +    +      +  L+ +Y  + SL    FD L +  +       +    +
Sbjct: 56  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 111
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 112 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    L
Sbjct: 26  TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 80
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +    +      +  L+ +Y  + SL    FD L +  +       +    +
Sbjct: 81  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 136
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 137 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 488 KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLVRLLGCC 546
           K+G+G +G VY  + KDG++     L +  G G+      E+ ++ +L+H N++ L    
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 547 VEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY-----LHRD 599
           +   ++   L+++Y  +     + F    K     +K   +  G+ + LLY     +H  
Sbjct: 88  LSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 600 SRLRIIHRDLKASNILL----DEELNPKISDFGMAKIFGGN-QDQADTGRVVGTL 649
               ++HRDLK +NIL+     E    KI+D G A++F    +  AD   VV T 
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V+  ++K   ++       +      +G +  M E  +++K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                 +  L+   M    +   ++  D       + R  F   + +S GL +LH+ +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
            II+RDLK  N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V+  ++K   ++       +      +G +  M E  +++K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                 +  L+   M    +   ++  D       + R  F   + +S GL +LH+ +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
            II+RDLK  N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 35/159 (22%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCV 547
           LG G  G + +  + D +++AVKR+        +    EV ++ +  +H N++R    C 
Sbjct: 32  LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIRYF--CT 86
Query: 548 EGEEKM----------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           E + +            + EY+  +    L  +P+            +++  + GL +LH
Sbjct: 87  EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-----------TLLQQTTSGLAHLH 135
Query: 598 RDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAK 631
               L I+HRDLK  NIL+       ++   ISDFG+ K
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKL 534
           T      L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    L
Sbjct: 39  TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----L 93
Query: 535 QHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
           +H N++  +    +      +  L+ +Y  + SL    FD L +  +       +    +
Sbjct: 94  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 149
Query: 591 RGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 205

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V+  ++K   ++       +      +G +  M E  +++K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                 +  L+   M    +   ++  D       + R  F   + +S GL +LH+ +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
            II+RDLK  N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 489 LGQGGFGPVYWGRLKDGQEIAV----KRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           LG+GGFG V+  ++K   ++       +      +G +  M E  +++K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 545 CCVEGEEKMLIYEYMPNRSLDALLF--DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
                 +  L+   M    +   ++  D       + R  F   + +S GL +LH+ +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS-GLEHLHQRN-- 309
Query: 603 RIIHRDLKASNILLDEELNPKISDFGMA 630
            II+RDLK  N+LLD++ N +ISD G+A
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLA 336

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 444 WIAKRKE-VIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRL 502
           ++AK KE  + K    + NT +L      QF+ + T          LG G FG V   + 
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD-----QFDRIKT----------LGTGSFGRVMLVKH 62
Query: 503 KD-GQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY 558
           K+ G   A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY
Sbjct: 63  KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 559 MPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL 616
           +        +F  L++     +   RF   + I     YLH    L +I+RDLK  N+++
Sbjct: 123 VAG----GEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLII 174
Query: 617 DEELNPKISDFGMAKIFGG 635
           D++   +++DFG AK   G
Sbjct: 175 DQQGYIQVTDFGFAKRVKG 193

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL--EEFMNEVMVISKLQHRN 538
           ++F+  S+LG G  G V   + +    I  ++L     +     + + E+ V+ +     
Sbjct: 16  DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V   G      E  +  E+M   SLD +L +    +R+       +   + RGL YL  
Sbjct: 76  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLR- 131
Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFG--------MAKIFGGNQDQADTGRVVGT 648
             + +I+HRD+K SNIL++     K+ DFG        MA  F G +      R+ GT
Sbjct: 132 -EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGT 188

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+  +++AVK L     +       F  E    + L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 127
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
            L + H++    IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLE---EFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+  +++AVK L     +       F  E    + L 
Sbjct: 28  SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 88  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 144
Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ-ADTGRVVGT 648
            L + H++    IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 145 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F     LG+G FG V     K   E+ AVK L K        +E  M E  V++    
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
              +  L  C +  +++  + EY+    L   ++   +  R            I+ GL +
Sbjct: 80  PPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L       II+RDLK  N++LD E + KI+DFGM K
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 505 GQEIAVKRLS----KASGQGLEEFMN----EVMVISKLQ-HRNLVRLLGCCVEGEEKMLI 555
           G E AVK +     + S + LEE       E  ++ ++  H +++ L+          L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 556 YEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNI 614
           ++ M        LFD L +K  L  ++  +I+  +   + +LH ++   I+HRDLK  NI
Sbjct: 179 FDLMRK----GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENI 231
Query: 615 LLDEELNPKISDFGMA 630
           LLD+ +  ++SDFG +
Sbjct: 232 LLDDNMQIRLSDFGFS 247

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +F     LG+G FG V     K   E+ AVK L K        +E  M E  V++    
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
              +  L  C +  +++  + EY+   +   L++   +  R            I+ GL +
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYV---NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L       II+RDLK  N++LD E + KI+DFGM K
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGL---EEFMNEVMVISKLQHRNLVR 541
           L   +G+G FG V+ G+ + G+E+AVK  S    +      E    VM    L+H N++ 
Sbjct: 7   LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LRHENILG 61
Query: 542 LLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
            +    +      +  L+ +Y  + SL    FD L +  +       +    + GL +LH
Sbjct: 62  FIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 598 RD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD 641
            +      +  I HRDLK+ NIL+ +     I+D G+A       D  D
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQH 536
           + F+    LG G FG V   + ++ G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK--ERLDWRKRFNIIEGISRGLL 594
             LV+L     +     ++ EY+    +    F  L++     +   RF   + I     
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQ-IVLTFE 155
Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH    L +I+RDLK  N+L+D++   +++DFG AK   G
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
           +  +L     ++++   +G+G FG V   R K  +++ A+K LSK       +   F  E
Sbjct: 65  KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++      +V+L     +     ++ EYMP   L  L+ +    E+  W  RF   E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 181
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            +    L L     +  IHRD+K  N+LLD+  + K++DFG
Sbjct: 182 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
           +  +L     ++++   +G+G FG V   R K  +++ A+K LSK       +   F  E
Sbjct: 60  KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++      +V+L     +     ++ EYMP   L  L+ +    E+  W  RF   E
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 176
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            +    L L     +  IHRD+K  N+LLD+  + K++DFG
Sbjct: 177 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RN 538
           +++QL  KLG+G +  V+    + + +++ VK L       ++    E+ ++  L+   N
Sbjct: 37  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 539 LVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++ L     +   +   L++E++ N       F  L +   D+  RF + E I + L Y 
Sbjct: 94  IITLADIVKDPVSRTPALVFEHVNNTD-----FKQLYQTLTDYDIRFYMYE-ILKALDYC 147
Query: 597 HRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFGGNQD 638
           H    + I+HRD+K  N+++D E    ++ D+G+A+ +   Q+
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNE 527
           +  +L     ++++   +G+G FG V   R K  +++ A+K LSK       +   F  E
Sbjct: 65  KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 528 VMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIE 587
             +++      +V+L     +     ++ EYMP   L  L+ +    E+  W  RF   E
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--W-ARFYTAE 181
Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            +    L L     +  IHRD+K  N+LLD+  + K++DFG
Sbjct: 182 VV----LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 481 NNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEE--FMNEVMVISKLQHR 537
           N+ +   ++G G  G V+  R  K G  IAVK++ ++  +   +   M+  +V+      
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 538 NLVRLLGCCVEGEEKMLIYEYMPN--RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
            +V+  G  +   +  +  E M      L   +  P+ +  L       +   I + L Y
Sbjct: 85  YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYY 139
Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           L    +  +IHRD+K SNILLDE    K+ DFG++
Sbjct: 140 LK--EKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
           T  F    K+G G FG V+    RL DG   A+KR  K     ++E   + EV   + L 
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
           QH ++VR      E +  ++  EY    SL DA+  +          +  +++  + RGL
Sbjct: 67  QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
            Y+H    + ++H D+K SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
           T  F    K+G G FG V+    RL DG   A+KR  K     ++E   + EV   + L 
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
           QH ++VR      E +  ++  EY    SL DA+  +          +  +++  + RGL
Sbjct: 67  QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
            Y+H    + ++H D+K SNI +
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFI 146

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
           T  F    K+G G FG V+    RL DG   A+KR  K     ++E   + EV   + L 
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
           QH ++VR      E +  ++  EY    SL DA+  +          +  +++  + RGL
Sbjct: 69  QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
            Y+H    + ++H D+K SNI +
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFI 148

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVKRLSKASGQGLEE--FMNEVMVISKL- 534
           T  F    K+G G FG V+    RL DG   A+KR  K     ++E   + EV   + L 
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
           QH ++VR      E +  ++  EY    SL DA+  +          +  +++  + RGL
Sbjct: 65  QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 594 LYLHRDSRLRIIHRDLKASNILL 616
            Y+H    + ++H D+K SNI +
Sbjct: 125 RYIHS---MSLVHMDIKPSNIFI 144

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 489 LGQGGFGPVYWG-RLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
           LG+G    V     L   QE AVK + K  G        EV ++ + Q HRN++ L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
            E +   L++E M   S+ + +    K+   +  +   +++ ++  L +LH      I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIH---KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 607 RDLKASNILLDE--ELNP-KISDFGMAKIFGGNQD 638
           RDLK  NIL +   +++P KI DF +      N D
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	649
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-85
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-64
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-54
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-46
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-45
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-43
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-42
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-42
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-42
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-42
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-42
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-41
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-40
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-40
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-39
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	7e-38
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-37
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-36
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-36
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-36
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-35
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-35
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-35
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-35
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-35
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-35
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-34
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-34
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-34
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-34
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-34
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-34
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	8e-34
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-33
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-33
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-33
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-33
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-33
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-33
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-33
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-33
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	9e-33
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-32
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-32
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-32
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-32
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-32
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-32
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	6e-32
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	8e-32
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-32
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-32
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-32
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-31
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-31
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-31
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-31
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-31
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-31
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-30
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-30
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-30
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-30
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-30
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-29
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-29
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-29
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-29
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-29
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-29
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	9e-29
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-28
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-28
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-27
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-27
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-27
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-27
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-27
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-26
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-26
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-25
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-25
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-25
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-25
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-24
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-24
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-24
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-24
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-24
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-24
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-24
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-23
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-23
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-23
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-23
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-23
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-23
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-22
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-22
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-22
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-22
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-22
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-22
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-21
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-21
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-21
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-21
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-21
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-21
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-21
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-21
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-21
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-21
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-21
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-21
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-21
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-21
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-21
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	7e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-21
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-20
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-20
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-20
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-20
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-20
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-20
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-20
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-20
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-20
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-20
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-20
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-20
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-20
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-20
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-20
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-20
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-20
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-20
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-20
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-20
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-19
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-19
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-19
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-19
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-19
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-19
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-19
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-19
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-19
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	9e-19
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-18
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-18
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-18
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-18
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-18
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-17
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-17
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-17
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	9e-17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-16
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-16
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-15
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-15
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-15
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-15
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	9e-15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-15
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-14
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-14
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	8e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-13
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-12
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	5e-11
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-10
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-10
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	6e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	1e-09
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-09
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	2e-09
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	2e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-09
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	6e-09
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	7e-09
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	1e-08
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	2e-08
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	4e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-07
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-07
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	2e-06
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	2e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-06
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	5e-06
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	1e-05
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	6e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	1e-05
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	1e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	9e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-05
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	3e-05
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	3e-05
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	2e-04
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	4e-05
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	1e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  298 bits (765), Expect = 1e-96
 Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 14/192 (7%)

Query: 467 DLPLFQFEELATATNNF------QLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSK----A 516
               F F EL   TNNF         +K+G+GGFG VY G + +   +AVK+L+      
Sbjct: 11  RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT 69

Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
           + +  ++F  E+ V++K QH NLV LLG   +G++  L+Y YMPN SL   L        
Sbjct: 70  TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129

Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
           L W  R  I +G + G+ +LH +     IHRD+K++NILLDE    KISDFG+A+     
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKF 186

Query: 637 QDQADTGRVVGT 648
                T R+VGT
Sbjct: 187 AQTVMTSRIVGT 198

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  298 bits (765), Expect = 2e-96
 Identities = 84/181 (46%), Positives = 110/181 (60%), Gaps = 3/181 (1%)

Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLE-EFMNEVM 529
           F   EL  A++NF   + LG+GGFG VY GRL DG  +AVKRL +   QG E +F  EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEG 588
           +IS   HRNL+RL G C+   E++L+Y YM N S+ + L +  + +  LDW KR  I  G
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            +RGL YLH     +IIHRD+KA+NILLDEE    + DFG+AK+         T  V GT
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGT 198

Query: 649 L 649
           +
Sbjct: 199 I 199

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  268 bits (687), Expect = 7e-85
 Identities = 78/180 (43%), Positives = 105/180 (58%), Gaps = 6/180 (3%)

Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMV 530
               +L  ATNNF     +G G FG VY G L+DG ++A+KR +  S QG+EEF  E+  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGI 589
           +S  +H +LV L+G C E  E +LIY+YM N +L   L+   L    + W +R  I  G 
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF-GGNQDQADTGRVVGT 648
           +RGL YLH  +   IIHRD+K+ NILLDE   PKI+DFG++K     +Q    T  V GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST-VVKGT 204

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  213 bits (545), Expect = 4e-64
 Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 17/189 (8%)

Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMV 530
              E L   +   QL     +G FG V+  +L   + +AVK       Q   +   EV  
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 531 ISKLQHRNLVRLLGCCVEGE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           +  ++H N+++ +G    G     +  LI  +    SL     D LK   + W +  +I 
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSL----SDFLKANVVSWNELCHIA 127

Query: 587 EGISRGLLYLHRD-------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           E ++RGL YLH D        +  I HRD+K+ N+LL   L   I+DFG+A  F   +  
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187

Query: 640 ADTGRVVGT 648
            DT   VGT
Sbjct: 188 GDTHGQVGT 196

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  188 bits (478), Expect = 2e-54
 Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 27/197 (13%)

Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--V 528
               E +   +N +L   +G+G +G VY G L D + +AVK  S A+ Q    F+NE  +
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 529 MVISKLQHRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
             +  ++H N+ R +            E +L+ EY PN SL       L     DW    
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLX----KYLSLHTSDWVSSC 114

Query: 584 NIIEGISRGLLYLHRD------SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN- 636
            +   ++RGL YLH +       +  I HRDL + N+L+  +    ISDFG++    GN 
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

Query: 637 -----QDQADTGRVVGT 648
                ++       VGT
Sbjct: 175 LVRPGEEDNAAISEVGT 191

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  165 bits (420), Expect = 2e-46
 Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 6/196 (3%)

Query: 456 SATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL-- 513
                 T  L        +++     +  +  K+G G FG V+      G ++AVK L  
Sbjct: 12  DYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILME 70

Query: 514 SKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLK 573
                + + EF+ EV ++ +L+H N+V  +G   +     ++ EY+   SL  LL     
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130

Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +E+LD R+R ++   +++G+ YLH      I+HR+LK+ N+L+D++   K+ DFG++++ 
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189

Query: 634 GGNQDQADTGRVVGTL 649
                 + +    GT 
Sbjct: 190 ASTFLSSKSA--AGTP 203

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  161 bits (410), Expect = 6e-45
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
                 LG+G FG       ++ G+ + +K L +   +    F+ EV V+  L+H N+++
Sbjct: 12  LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
            +G   + +    I EY+   +L  ++       +  W +R +  + I+ G+ YLH    
Sbjct: 72  FIGVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLH---S 126

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           + IIHRDL + N L+ E  N  ++DFG+A++    + Q +  R
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  155 bits (395), Expect = 3e-43
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 24/183 (13%)

Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL----SKASGQGLEEFMNEV 528
           F EL        L   +G GGFG VY      G E+AVK       +   Q +E    E 
Sbjct: 6   FAEL-------TLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEA 57

Query: 529 MVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            + + L+H N++ L G C++     L+ E+     L       L  +R+      N    
Sbjct: 58  KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL----NRVLSGKRIPPDILVNWAVQ 113

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP--------KISDFGMAKIFGGNQDQA 640
           I+RG+ YLH ++ + IIHRDLK+SNIL+ +++          KI+DFG+A+ +      +
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS 173

Query: 641 DTG 643
             G
Sbjct: 174 AAG 176

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  154 bits (390), Expect = 3e-42
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              ++   +G+G FG V   + +  +++A+K++   S    + F+ E+  +S++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C+      L+ EY    SL  +L               +     S+G+ YLH   
Sbjct: 65  KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122

Query: 601 RLRIIHRDLKASNILLDEELN-PKISDFGMAKI 632
              +IHRDLK  N+LL       KI DFG A  
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  151 bits (385), Expect = 7e-42
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL--SKASGQGLEEFMNEVMVISKLQHRN 538
                 +KL +   G ++ GR + G +I VK L     S +   +F  E   +    H N
Sbjct: 10  KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68

Query: 539 LVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++ +LG C         LI  +MP  SL  +L +      +D  +       ++RG+ +L
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFL 127

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           H    L I    L + ++++DE++  +IS   +   F
Sbjct: 128 HTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSF 163

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  152 bits (386), Expect = 7e-42
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 23/182 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQG-------LEEFMNEVMVIS 532
           N  +   ++G+GGFG V+ GRL  D   +A+K L     +G        +EF  EV ++S
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            L H N+V+L G         ++ E++P   L   L D  K   + W  +  ++  I+ G
Sbjct: 79  NLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALG 134

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           + Y+  +    I+HRDL++ NI L        +  K++DFG+++             ++G
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLG 188

Query: 648 TL 649
             
Sbjct: 189 NF 190

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  152 bits (385), Expect = 9e-42
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 10/171 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
               +  ++G G FG VY G+     ++AVK L+    + Q L+ F NEV V+ K +H N
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           ++  +G      +  ++ ++    SL   L     + + + +K  +I    +RG+ YLH 
Sbjct: 82  ILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA 138

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
                IIHRDLK++NI L E+   KI DFG+A             ++ G++
Sbjct: 139 ---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  150 bits (380), Expect = 7e-41
 Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 21/184 (11%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--VMVISKLQ 535
           T   +  L   +G+G +G V+ G  + G+ +AVK  S    +  + +  E  +     L+
Sbjct: 5   TVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSS---RDEKSWFRETELYNTVMLR 60

Query: 536 HRNLVRLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H N++  +   +          LI  Y    SL    +D L+   LD      I+  I+ 
Sbjct: 61  HENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIAS 116

Query: 592 GLLYLHRDSRLR-----IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR-- 644
           GL +LH +         I HRDLK+ NIL+ +     I+D G+A +   + +Q D G   
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176

Query: 645 VVGT 648
            VGT
Sbjct: 177 RVGT 180

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  147 bits (374), Expect = 9e-40
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--VMVISKLQ 535
           T     Q+  ++G+G +G V+ G+ + G+++AVK            +  E  +     ++
Sbjct: 34  TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT---TEEASWFRETEIYQTVLMR 89

Query: 536 HRNLVRLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H N++  +   ++G        LI +Y  N SL    +D LK   LD +    +      
Sbjct: 90  HENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVS 145

Query: 592 GLLYLHRDSRLR-----IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD--TGR 644
           GL +LH +         I HRDLK+ NIL+ +     I+D G+A  F  + ++ D     
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205

Query: 645 VVGTL 649
            VGT 
Sbjct: 206 RVGTK 210

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  146 bits (370), Expect = 3e-39
 Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 20/182 (10%)

Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL--SKASGQGLEEFMNEVMV 530
           FE+L       ++   +G+G FG VY GR     E+A++ +   + +   L+ F  EVM 
Sbjct: 32  FEQL-------EIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMA 82

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
             + +H N+V  +G C+      +I      R+L +++ D   K  LD  K   I + I 
Sbjct: 83  YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIV 140

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR---VVG 647
           +G+ YLH      I+H+DLK+ N+  D      I+DFG+  I G  Q      +     G
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNG 196

Query: 648 TL 649
            L
Sbjct: 197 WL 198

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  142 bits (361), Expect = 7e-38
 Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 24/195 (12%)

Query: 468 LPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE 527
           LPL     +A       L   +G+G FG V+ G+ + G+E+AVK  S    +    +  E
Sbjct: 32  LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFRE 84

Query: 528 --VMVISKLQHRNLVRLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDWRK 581
             +     L+H N++  +    +         L+ +Y  + SL    FD L +  +    
Sbjct: 85  AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEG 140

Query: 582 RFNIIEGISRGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
              +    + GL +LH +      +  I HRDLK+ NIL+ +     I+D G+A      
Sbjct: 141 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200

Query: 637 QDQADTGR--VVGTL 649
            D  D      VGT 
Sbjct: 201 TDTIDIAPNHRVGTK 215

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  139 bits (353), Expect = 4e-37
 Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 481 NNFQLSSKLGQGGFGPVY---WGRLKDGQEI--AVKRL-SKASGQGLEEFMNEVMVISKL 534
              +    LG+G FG V    +    DG     AVK L + A  Q    +  E+ ++  L
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90

Query: 535 QHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            H ++++  GCC +       L+ EY+P  SL     D L +  +   +     + I  G
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEG 146

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           + YLH       IHRDL A N+LLD +   KI DFG+AK      +
Sbjct: 147 MAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  139 bits (352), Expect = 2e-36
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 7/165 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRL-SKASGQGLEEFMNEVMVISKLQHRN 538
            +  L  ++G+G FG V+ GRL+ D   +AVK            +F+ E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +VRL+G C + +   ++ E +        L    +  RL  +    ++   + G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLE- 230

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
                 IHRDL A N L+ E+   KISDFGM++        A  G
Sbjct: 231 --SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  138 bits (349), Expect = 2e-36
 Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ 535
            + +   +LG+G FG V   R        G+ +AVK+L  ++ + L +F  E+ ++  LQ
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100

Query: 536 HRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           H N+V+  G C     +   LI EY+P  SL   L     KER+D  K       I +G+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  136 bits (345), Expect = 4e-36
 Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ 535
            + +   +LG+G FG V   R        G+ +AVK+L  ++ + L +F  E+ ++  LQ
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69

Query: 536 HRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           H N+V+  G C     +   LI EY+P  SL   L     KER+D  K       I +G+
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            YL      R IHRDL   NIL++ E   KI DFG+ K+   +++
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  134 bits (340), Expect = 4e-35
 Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 12/165 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ 535
            + +  S+LG+G FG V   R        G  +AVK+L  +      +F  E+ ++  L 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82

Query: 536 HRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
              +V+  G       +   L+ EY+P+  L   L     + RLD  +       I +G+
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGM 140

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            YL      R +HRDL A NIL++ E + KI+DFG+AK+   ++D
Sbjct: 141 EYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  133 bits (337), Expect = 5e-35
 Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 13/166 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRL-SKASGQGLEEFMNEVMVISKL 534
              +    LG+G FG V   R        G+++AVK L  ++ G  + +   E+ ++  L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80

Query: 535 QHRNLVRLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            H N+V+  G C E       LI E++P+ SL   L  P  K +++ +++      I +G
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKG 138

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           + YL      + +HRDL A N+L++ E   KI DFG+ K    +++
Sbjct: 139 MDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  132 bits (334), Expect = 5e-35
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +      ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C+E     L+ E+M +  L   L    ++          +   +  G+ YL    
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYL---E 121

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
              +IHRDL A N L+ E    K+SDFGM +    +Q  + TG
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  132 bits (334), Expect = 6e-35
 Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
               L  +LG G FG V  G+ K   ++AVK + K      +EF  E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G C +     ++ EY+ N  L   L      + L+  +   +   +  G+ +L    
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYLRS--HGKGLEPSQLLEMCYDVCEGMAFL---E 121

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
             + IHRDL A N L+D +L  K+SDFGM +    +Q  +  G
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  133 bits (338), Expect = 7e-35
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 21/168 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRLSKASGQGLEEFMNEVMVISKL 534
            +  L  +LG+G FG V+     +         +AVK L +AS    ++F  E  +++ L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL------------FDPLKKERLDWRKR 582
           QH+++VR  G C EG   ++++EYM +  L+  L             + +    L   + 
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
             +   ++ G++YL   + L  +HRDL   N L+ + L  KI DFGM+
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  132 bits (334), Expect = 8e-35
 Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            +     +LG G FG V +G+ +   ++A+K + K      +EF+ E  V+  L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C +     +I EYM N  L   L +   + R   ++   + + +   + YL    
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYL---E 137

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
             + +HRDL A N L++++   K+SDFG+++    ++  +  G
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  131 bits (333), Expect = 3e-34
 Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 14/173 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRLSK-ASGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G      E     +A+K L +  S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+      LI + MP   L   + +   K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 131

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD--QADTGRV 645
           YL      R++HRDL A N+L+    + KI+DFG+AK+ G  +    A+ G+V
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  135 bits (341), Expect = 4e-34
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 278

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL   
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL--- 334

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +   IHR+L A N L+ E    K++DFG++++  G+   A  G
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  130 bits (330), Expect = 4e-34
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG------QEIAVKRLSKASGQGLEEFMNEVMVISKL 534
            +  L  +LG+G FG V+     +         +AVK L   +    ++F  E  +++ L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERLDWRK 581
           QH ++V+  G C +G+  ++++EYM +  L+  L                  K  L   +
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
             +I   I+ G++YL   +    +HRDL   N L+   L  KI DFGM+
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  130 bits (329), Expect = 5e-34
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG-QEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +  +  KLG G +G VY G  K     +AVK L K     +EEF+ E  V+ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V+LLG C       +I E+M   +L   L +   ++ +       +   IS  + YL   
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL--- 127

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +   IHRDL A N L+ E    K++DFG++++  G+   A  G
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  130 bits (328), Expect = 6e-34
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG------QEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
           +  +   +LG+  FG VY G L         Q +A+K L   A G   EEF +E M+ ++
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERLDWR 580
           LQH N+V LLG   + +   +I+ Y  +  L   L              D   K  L+  
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128

Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
              +++  I+ G+ YL   S   ++H+DL   N+L+ ++LN KISD G+ 
Sbjct: 129 DFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  131 bits (331), Expect = 6e-34
 Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 10/165 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRL-SKASGQGLEEFMNEVMVISKLQ 535
           +   +   +G G  G V +GRL+    +++  A+K L +  + +   +F++E  ++ +  
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H N++RL G    G   M++ EYM N SLD  L       +    +   ++ G+  G+ Y
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRY 166

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           L   S L  +HRDL A N+L+D  L  K+SDFG++++   + D A
Sbjct: 167 L---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  133 bits (337), Expect = 8e-34
 Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLG G FG V+        ++AVK + K     +E F+ E  V+  LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     + E   +I E+M   SL   L    +  +    K  +    I+ G+ ++    
Sbjct: 247 KLHAVVTK-EPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFI---E 301

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           +   IHRDL+A+NIL+   L  KI+DFG+A++   N+  A  G
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  129 bits (326), Expect = 1e-33
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 21/167 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD--------GQEIAVKRLSKASGQGLEEFMNEVMVIS 532
            +   +  LGQG F  ++ G  ++          E+ +K L KA     E F     ++S
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           KL H++LV   G CV G+E +L+ E++   SLD  L     K  ++   +  + + ++  
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAA 125

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNP--------KISDFGMAK 631
           + +L       +IH ++ A NILL  E +         K+SD G++ 
Sbjct: 126 MHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  128 bits (324), Expect = 3e-33
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV 547
           LG+G +G VY GR L +   IA+K + +   +  +    E+ +   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 548 EGEEKMLIY-EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH 606
           E    + I+ E +P  SL ALL       + + +      + I  GL YLH +   +I+H
Sbjct: 90  E-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145

Query: 607 RDLKASNILLDEEL-NPKISDFGMAKIFGGNQDQADTGRVVGT 648
           RD+K  N+L++      KISDFG +K   G     +T    GT
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGT 186

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  131 bits (332), Expect = 4e-33
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L   +G+G FG V  G  + G ++AVK +   +    + F+ E  V+++L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249

Query: 541 RLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +LLG  VE +    ++ EYM   SL   L     +  L           +   + YL   
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL--- 305

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                +HRDL A N+L+ E+   K+SDFG+ K
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  128 bits (325), Expect = 4e-33
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 11/164 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRLSK-ASGQGLEEFMNEVMVISKL 534
           +       +G G FG VY G LK         +A+K L    + +   +F+ E  ++ + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N++RL G   + +  M+I EYM N +LD  L +  K       +   ++ GI+ G+ 
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMK 161

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
           YL   + +  +HRDL A NIL++  L  K+SDFG++++   + +
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  129 bits (327), Expect = 4e-33
 Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 10/165 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKLQ 535
            N  +   +G G FG V  GRLK    +EI  A+K L    + +   +F+ E  ++ +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H N++RL G   + +  M++ EYM N SLD+ L       +    +   ++ GI+ G+ Y
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKY 162

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
           L   S +  +HRDL A NIL++  L  K+SDFG+ ++   + + A
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  128 bits (324), Expect = 5e-33
 Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 17/165 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRLSK-ASGQGLEEFMNEVMVISK 533
               +S +LGQG FG VY G  K   +      +A+K +++ AS +   EF+NE  V+ +
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDWRKRFNII 586
               ++VRLLG   +G+  ++I E M         RSL   + +          K   + 
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             I+ G+ YL   +  + +HRDL A N ++ E+   KI DFGM +
Sbjct: 145 GEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  127 bits (321), Expect = 5e-33
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L  +LG G FG V+ G      ++AVK L K      + F+ E  ++ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           RL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+ ++    
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI---E 126

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
               IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  127 bits (321), Expect = 6e-33
 Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRL---SKASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G      G+ +  AVK L     +  + +++F+ EV  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           L HRNL+RL G  +      ++ E  P  SL   L     +              ++ G+
Sbjct: 78  LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGM 134

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
            YL      R IHRDL A N+LL      KI DFG+ +    N D 
Sbjct: 135 GYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  126 bits (319), Expect = 9e-33
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L   +G+G FG V  G  + G ++AVK +   +    + F+ E  V+++L+H NLV
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLV 77

Query: 541 RLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +LLG  VE +    ++ EYM   SL   L     +  L           +   + YL   
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL--- 133

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                +HRDL A N+L+ E+   K+SDFG+ K
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  127 bits (321), Expect = 1e-32
 Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRL-SKASGQGLEEFMNEVMVISKL 534
             F+    LG G FG VY G      E     +A+K L    S +  +E ++E  V++ +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            + ++ RLLG C+      LI + MP   L   + +   K+ +  +   N    I++G+ 
Sbjct: 75  DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 131

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD--QADTGRV 645
           YL      R++HRDL A N+L+    + KI+DFG+AK+ G  +    A+ G+V
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  126 bits (318), Expect = 1e-32
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 488 KLGQGGFGPVYWGRLKDGQE---IAVKRLSK-ASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +LG G FG V  G  +  ++   +A+K L +       EE M E  ++ +L +  +VRL+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C + E  ML+ E      L   L    K+E +       ++  +S G+ YL       
Sbjct: 77  GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL---EEKN 130

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            +HRDL A N+LL      KISDFG++K  G +  
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  126 bits (319), Expect = 2e-32
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE---IAVKRL-SKASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+K        A+KR+   AS     +F  E+ V+ KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------FDPLKKERLDWRKRFNIIE- 587
           H N++ LLG C       L  EY P+ +L   L        DP            +  + 
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 588 -----GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                 ++RG+ YL   S+ + IHRDL A NIL+ E    KI+DFG+++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  126 bits (318), Expect = 3e-32
 Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSK--ASGQGLEEFMNEVMVISKL 534
           N   L   LG+G FG V  G LK        +AVK +    +S + +EEF++E   +   
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 535 QHRNLVRLLGCCVEGE-----EKMLIYEYMPNRSLDALL---FDPLKKERLDWRKRFNII 586
            H N++RLLG C+E       + M+I  +M    L   L         + +  +     +
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             I+ G+ YL   S    +HRDL A N +L +++   ++DFG++K
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  126 bits (318), Expect = 4e-32
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 17/165 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG------QEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
            N  L   LG G FG VY G++          ++AVK L +  S Q   +F+ E ++ISK
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGI 589
             H+N+VR +G  ++   + ++ E M    L + L      P +   L      ++   I
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           + G  YL        IHRD+ A N LL         KI DFGMA+
Sbjct: 150 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  125 bits (315), Expect = 5e-32
 Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 484 QLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRN 538
             +  +G+G FG VY G L D        AVK L++      + +F+ E +++    H N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87

Query: 539 LVRLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++ LLG C+  E   +++  YM +  L   + +         +        +++G+ YL 
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYL- 144

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  125 bits (315), Expect = 5e-32
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 484 QLSSKLGQGGFGPVYWGRLKDGQE----IAVKRLSK-ASGQGLEEFMNEVMVISKLQHRN 538
                +G+G FG VY G   D  +     A+K LS+    Q +E F+ E +++  L H N
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 539 LVRLLGCCVEGEE-KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++ L+G  +  E    ++  YM +  L   +  P  +     +   +    ++RG+ YL 
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYL- 140

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +  + +HRDL A N +LDE    K++DFG+A+
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  128 bits (323), Expect = 6e-32
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L      + L   +  ++   I+ G+ Y+    
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---E 297

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R+  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  129 bits (326), Expect = 6e-32
 Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 6/163 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L K      E F+ E  V+ KL+H  LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L     E E   ++ EYM   SL   L      + L   +  ++   I+ G+ Y+    
Sbjct: 326 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---E 380

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
           R+  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  124 bits (314), Expect = 6e-32
 Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)

Query: 488 KLGQGGFGPVYWGRLKDG---QEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +     + +AVK L          +E + E  V+ +L +  +VR+
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL      
Sbjct: 84  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL---EES 136

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
             +HRDL A N+LL  +   KISDFG++K    +++
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  126 bits (318), Expect = 8e-32
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 17/165 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG------QEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
            N  L   LG G FG VY G++          ++AVK L +  S Q   +F+ E ++ISK
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL----FDPLKKERLDWRKRFNIIEGI 589
             H+N+VR +G  ++   + ++ E M    L + L      P +   L      ++   I
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAK 631
           + G  YL        IHRD+ A N LL         KI DFGMA+
Sbjct: 191 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  125 bits (316), Expect = 9e-32
 Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 31/212 (14%)

Query: 448 RKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDG-- 505
             E++      N    ++  L   +   L    NN +    +G+G FG V+  R      
Sbjct: 14  PSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLP 73

Query: 506 ----QEIAVKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP 560
                 +AVK L  +AS     +F  E  ++++  + N+V+LLG C  G+   L++EYM 
Sbjct: 74  YEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMA 133

Query: 561 NRSLDALL---------------------FDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
              L+  L                             L   ++  I   ++ G+ YL   
Sbjct: 134 YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL--- 190

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           S  + +HRDL   N L+ E +  KI+DFG+++
Sbjct: 191 SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  126 bits (317), Expect = 9e-32
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 484 QLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSK-ASGQGLEEFMNEVMVISKLQHRN 538
             +  +G+G FG VY G L D        AVK L++      + +F+ E +++    H N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151

Query: 539 LVRLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++ LLG C+  E   +++  YM +  L   + +         +        +++G+ +L 
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFL- 208

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +  + +HRDL A N +LDE+   K++DFG+A+
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  124 bits (314), Expect = 9e-32
 Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 18/187 (9%)

Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDG----QEIAVKRLSK 515
           ++++ + D    + E++      F L   LG+G FG V   +LK       ++AVK L  
Sbjct: 2   LDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61

Query: 516 --ASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK------MLIYEYMPNRSLDAL 567
              +   +EEF+ E   + +  H ++ +L+G  +    K      M+I  +M +  L A 
Sbjct: 62  DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121

Query: 568 LFD---PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI 624
           L           L  +     +  I+ G+ YL   S    IHRDL A N +L E++   +
Sbjct: 122 LLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCV 178

Query: 625 SDFGMAK 631
           +DFG+++
Sbjct: 179 ADFGLSR 185

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  125 bits (315), Expect = 9e-32
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 12/163 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRLSKASG-QGLEEFMNEVMVISKL 534
              +    LG G FG V+ G      E     + +K +   SG Q  +   + ++ I  L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H ++VRLLG C  G    L+ +Y+P  SL   +     +  L  +   N    I++G+ 
Sbjct: 73  DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ--HRGALGPQLLLNWGVQIAKGMY 129

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           YL       ++HR+L A N+LL      +++DFG+A +   + 
Sbjct: 130 YL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  124 bits (313), Expect = 1e-31
 Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 20/178 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRL---SKASGQGLEEFMNEVMVISKLQH 536
            NF++  K+G+G F  VY    L DG  +A+K++        +   + + E+ ++ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGIS 590
            N+++     +E  E  ++ E      L  ++     K     ++             + 
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMI-----KHFKKQKRLIPERTVWKYFVQLC 146

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             L ++H     R++HRD+K +N+ +      K+ D G+ + F      A +  +VGT
Sbjct: 147 SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  124 bits (313), Expect = 2e-31
 Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 9/171 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
             +    K+G+G FG     +  +DG++  +K   +S+ S +  EE   EV V++ ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V+      E     ++ +Y     L   + +  K       +  +    I   L ++H
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVH 142

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
                +I+HRD+K+ NI L ++   ++ DFG+A++     + A     +GT
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGT 188

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  122 bits (309), Expect = 3e-31
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 11/162 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKLQ 535
            +  L+  LG+G FG VY G      G++I  AVK   K  +    E+FM+E +++  L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++V+L+G   E E   +I E  P   L   L     K  L           I + + Y
Sbjct: 72  HPHIVKLIGII-EEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAY 128

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           L     +  +HRD+   NIL+      K+ DFG+++      
Sbjct: 129 L---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  127 bits (321), Expect = 5e-31
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 488 KLGQGGFGPVYWGRLKDGQE---IAVKRL-SKASGQGLEEFMNEVMVISKLQHRNLVRLL 543
           +LG G FG V  G  +  ++   +A+K L         EE M E  ++ +L +  +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 544 GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLR 603
           G C + E  ML+ E      L   L    K+E +       ++  +S G+ YL       
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL---EEKN 456

Query: 604 IIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
            +HR+L A N+LL      KISDFG++K  G +  
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  121 bits (306), Expect = 6e-31
 Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRLSK-ASGQGLEEFMNEVMVISKLQ 535
              +L   +G+G FG V+ G     +   +  A+K      S    E+F+ E + + +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++V+L+G   E     +I E      L + L    +K  LD          +S  L Y
Sbjct: 75  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAY 131

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           L      R +HRD+ A N+L+      K+ DFG+++ 
Sbjct: 132 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  122 bits (309), Expect = 6e-31
 Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 22/169 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRL-SKASGQGLEEFMNEVMVISK 533
           NN Q    LG G FG V         +      +AVK L S A     E  M+E+ ++S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPN-----------RSLDALLFDPLKKERLDWRK 581
           L QH N+V LLG C  G   ++I EY              R L+      +       R 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
             +    +++G+ +L   +    IHRD+ A N+LL      KI DFG+A
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  121 bits (307), Expect = 8e-31
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG------QEIAVKRL-SKASGQGLEEFMNEVMVISK 533
            N  L   LG+G FG V                +AVK L   AS   L + ++E  V+ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPN-------RSLDALLFDPLKKERLDWRKRFNII 586
           + H ++++L G C +    +LI EY          R    +    L           +  
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 587 EG--------------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +               IS+G+ YL   + ++++HRDL A NIL+ E    KISDFG+++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  123 bits (310), Expect = 1e-30
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 26/174 (14%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD--------GQEIAVKRL-SKASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V                  +AVK L   A+ + L + ++E+ ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERL 577
             + +H+N++ LLG C +     +I EY    +L   L              + + +E++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +    ++RG+ YL   +  + IHRDL A N+L+ E    KI+DFG+A+
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  122 bits (307), Expect = 1e-30
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 26/174 (14%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD--------GQEIAVKRL-SKASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V                  +AVK L   A+ + L + ++E+ ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERL 577
             + +H+N++ LLG C +     +I EY    +L   L              + + +E++
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            ++   +    ++RG+ YL   +  + IHRDL A N+L+ E    KI+DFG+A+
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  121 bits (305), Expect = 1e-30
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 24/180 (13%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            ++F+  + LGQG FG V   R   D +  A+K++     + L   ++EVM+++ L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 539 LVRLLGCCVEG----------EEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRF-- 583
           +VR     +E           ++K  ++   EY  N +L    +D +  E L+ ++    
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQRDEYW 119

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            +   I   L Y+H      IIHRDLK  NI +DE  N KI DFG+AK    + D     
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  119 bits (300), Expect = 6e-30
 Identities = 51/173 (29%), Positives = 68/173 (39%), Gaps = 26/173 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRL-SKASGQGLEEFMNEVMVISK 533
           N       LG G FG V         +      +AVK L   A     E  M+E+ V+S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL---------------FDPLKKERL 577
           L  H N+V LLG C  G   ++I EY     L   L                    +  L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           D     +    +++G+ +L   +    IHRDL A NILL      KI DFG+A
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 192

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  119 bits (299), Expect = 8e-30
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 19/162 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           ++    KLG+GGF  V     L DG   A+KR+     Q  EE   E  +     H N++
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 541 RLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGIS 590
           RL+  C+          L+  +    +L    ++ +++   D            ++ GI 
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTL----WNEIER-LKDKGNFLTEDQILWLLLGIC 144

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           RGL  +H        HRDLK +NILL +E  P + D G    
Sbjct: 145 RGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  119 bits (301), Expect = 1e-29
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 26/174 (14%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD--------GQEIAVKRL-SKASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V                 ++AVK L S A+ + L + ++E+ ++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL-------------DALLFDPLKKERL 577
             + +H+N++ LLG C +     +I EY    +L              +       +E+L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
             +   +    ++RG+ YL   +  + IHRDL A N+L+ E+   KI+DFG+A+
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  123 bits (309), Expect = 2e-29
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEI--AVKRL-SKASGQGLEEFMNEVMVISKLQ 535
              +L   +G+G FG V+ G     +   +  A+K   +  S    E+F+ E + + +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++V+L+G   E     +I E      L + L    +K  LD          +S  L Y
Sbjct: 450 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAY 506

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L      R +HRD+ A N+L+      K+ DFG+++
Sbjct: 507 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  118 bits (297), Expect = 2e-29
 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 25/173 (14%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V              + +AVK L   A+       M+E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 534 L-QHRNLVRLLGCC-VEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERLD 578
           +  H N+V LLG C   G   M+I E+    +L   L              + L K+ L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146

Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
                     +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  117 bits (294), Expect = 3e-29
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 17/176 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRN 538
            +F+    LG+GGFG V+  + K D    A+KR+         E+ M EV  ++KL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 539 LVRLLGCCVEGEE---------KMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNII 586
           +VR     +E            K+ +Y   +     +L   +      E  +     +I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
             I+  + +LH      ++HRDLK SNI    +   K+ DFG+      ++++   
Sbjct: 125 LQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  116 bits (292), Expect = 4e-29
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            +F+    +G GGFG V+  +   DG+   +KR+   +    E+   EV  ++KL H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 540 VRLLGCCVEGEEKM----------------LIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
           V   GC    +                   +  E+    +L+  + +  + E+LD     
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            + E I++G+ Y+H     ++I+RDLK SNI L +    KI DFG+      +  +    
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT--- 179

Query: 644 RVVGT 648
           R  GT
Sbjct: 180 RSKGT 184

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  117 bits (294), Expect = 4e-29
 Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 8/167 (4%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +++  +LG G FG VY  +  + G   A K +   S + LE+++ E+ +++   H  +V+
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           LLG      +  ++ E+ P  ++DA++        L   +   +   +   L +LH    
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIM--LELDRGLTEPQIQVVCRQMLEALNFLHSK-- 136

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            RIIHRDLKA N+L+  E + +++DFG++        + D+   +GT
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGT 180

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  116 bits (293), Expect = 4e-29
 Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 10/167 (5%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           +    K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N+V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
            L   + G+E  ++ EY+   SL     D + +  +D  +   +     + L +LH +  
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            ++IHRD+K+ NILL  + + K++DFG        Q +  T  +VGT
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  117 bits (294), Expect = 5e-29
 Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 23/215 (10%)

Query: 442 WRWIAKRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR 501
           W   + + + +   +  N   +  + L    +E      +      ++G+G FG V+  +
Sbjct: 20  WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREE-VHWMTHQPRVGRGSFGEVHRMK 78

Query: 502 -LKDGQEIAVKRLSKASGQGLEEF-MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM 559
             + G + AVK++       LE F + E++  + L    +V L G   EG    +  E +
Sbjct: 79  DKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132

Query: 560 PNRSLDALL--FDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD 617
              SL  L+     L ++R         +     GL YLH     RI+H D+KA N+LL 
Sbjct: 133 EGGSLGQLIKQMGCLPEDRAL-----YYLGQALEGLEYLHTR---RILHGDVKADNVLLS 184

Query: 618 EELNP-KISDFGMAKIFGGNQDQADTGR---VVGT 648
            + +   + DFG A     +           + GT
Sbjct: 185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 219

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  116 bits (292), Expect = 9e-29
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 10/167 (5%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
                K+G+G  G V   R    G+++AVK +     Q  E   NEV+++   QH N+V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           +    + GEE  ++ E++   +L     D + + RL+  +   + E + + L YLH    
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQ-- 160

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             +IHRD+K+ +ILL  +   K+SDFG       +  +  +  +VGT
Sbjct: 161 -GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGT 204

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  115 bits (289), Expect = 9e-29
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHR 537
            ++++   +G G +G     R   DG+ +  K       +    +  ++EV ++ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 538 NLVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGI 589
           N+VR     ++     L  + EY     L +++      +    R+         ++  +
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQL 120

Query: 590 SRGLLYLH--RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
           +  L   H   D    ++HRDLK +N+ LD + N K+ DFG+A+I   +   A T   VG
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVG 178

Query: 648 T 648
           T
Sbjct: 179 T 179

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  116 bits (293), Expect = 1e-28
 Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 31/178 (17%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE------IAVKRL-SKASGQGLEEFMNEVMVISK 533
            N +    LG G FG V         +      +AVK L  KA     E  M+E+ ++++
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSL--------DALLFDPLKKERLDWRKRFN 584
           L  H N+V LLG C       LI+EY     L        +    D ++ E     +   
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 585 IIEG------------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
            +              +++G+ +L        +HRDL A N+L+      KI DFG+A
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  113 bits (286), Expect = 3e-28
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 16/169 (9%)

Query: 488 KLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLG 544
           ++G+G F  VY G   +   E+A    +  K +    + F  E  ++  LQH N+VR   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 545 CCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
                 +      L+ E M + +L   L    + + +  +   +    I +GL +LH   
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLH-TR 148

Query: 601 RLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGGNQDQADTGRVVGT 648
              IIHRDLK  NI +     + KI D G+A +   +  +A    V+GT
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGT 193

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  114 bits (287), Expect = 3e-28
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 12/181 (6%)

Query: 473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKR--LSKASGQGLEEFMNEVMV 530
           F+ ++     + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79

Query: 531 ISKLQHRNL--VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
           ++KLQ  +   +RL    +  +   ++ E   N  L++ L    KK+ +D  +R +  + 
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWL---KKKKSIDPWERKSYWKN 135

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   +  +H   +  I+H DLK +N L+ +    K+ DFG+A     +         VGT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGT 191

Query: 649 L 649
           +
Sbjct: 192 V 192

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  113 bits (284), Expect = 7e-28
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 24/160 (15%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS--GQGLEE-FMNEVMVISKLQHR 537
            +     LG+GGF   +        +  A K + K+        E    E+ +   L H+
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGIS 590
           ++V   G   E  + + ++ E    RSL     +  K+     RK          +  I 
Sbjct: 76  HVVGFHGF-FEDNDFVFVVLELCRRRSL----LELHKR-----RKALTEPEARYYLRQIV 125

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
            G  YLHR    R+IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 126 LGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  113 bits (285), Expect = 8e-28
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 24/160 (15%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS--GQGLEE-FMNEVMVISKLQHR 537
            +     LG+GGF   +        +  A K + K+        E    E+ +   L H+
Sbjct: 42  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGIS 590
           ++V   G   E  + + ++ E    RSL     +  K+     RK          +  I 
Sbjct: 102 HVVGFHGF-FEDNDFVFVVLELCRRRSL----LELHKR-----RKALTEPEARYYLRQIV 151

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
            G  YLHR    R+IHRDLK  N+ L+E+L  KI DFG+A
Sbjct: 152 LGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  112 bits (283), Expect = 9e-28
 Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 11/168 (6%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHRNLV 540
           F    K+G+G FG V+ G   +  + +A+K +     +  +E+   E+ V+S+     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +  G  ++  +  +I EY+   S      D L+   LD  +   I+  I +GL YLH + 
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLDYLHSE- 138

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             + IHRD+KA+N+LL E    K++DFG+A      Q + +T   VGT
Sbjct: 139 --KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 182

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  112 bits (283), Expect = 2e-27
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 12/173 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRN 538
             + +  ++G GG   V+    +  Q  A+K ++   A  Q L+ + NE+  ++KLQ  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 539 L--VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
              +RL    +  +   ++ E   N  L++ L    KK+ +D  +R +  + +   +  +
Sbjct: 69  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 124

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           H   +  I+H DLK +N L+ +    K+ DFG+A     +         VGT+
Sbjct: 125 H---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 173

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  113 bits (285), Expect = 2e-27
 Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 12/173 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKLQHRN 538
             + +  ++G GG   V+    +  Q  A+K   L +A  Q L+ + NE+  ++KLQ  +
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 539 L--VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
              +RL    +  +   ++ E   N  L++ L    KK+ +D  +R +  + +   +  +
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL---KKKKSIDPWERKSYWKNMLEAVHTI 171

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           H   +  I+H DLK +N L+ +    K+ DFG+A     +         VG +
Sbjct: 172 H---QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAV 220

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  112 bits (281), Expect = 2e-27
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ 535
           T+ + + LS  LGQG    V+ GR K  G   A+K  +  S  + ++  M E  V+ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 536 HRNLVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           H+N+V+L     E           E+ P  SL  +L +P     L   +   ++  +  G
Sbjct: 66  HKNIVKLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAKIFGGNQ 637
           + +L       I+HR++K  NI+     D +   K++DFG A+    ++
Sbjct: 125 MNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  110 bits (278), Expect = 3e-27
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 23/161 (14%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS--GQGLEE-FMNEVMVISKLQH 536
            +F++ + LG+G F  VY    +  G E+A+K + K +    G+ +   NEV +  +L+H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGI 589
            +++ L     E    + L+ E   N  +       LK       K F+       +  I
Sbjct: 71  PSILELYNY-FEDSNYVYLVLEMCHNGEM----NRYLKNRV----KPFSENEARHFMHQI 121

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
             G+LYLH      I+HRDL  SN+LL   +N KI+DFG+A
Sbjct: 122 ITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLA 159

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  113 bits (283), Expect = 4e-27
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQ 535
           T+ + + LS  LGQG    V+ GR K  G   A+K  +  S  + ++  M E  V+ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 536 HRNLVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           H+N+V+L     E           E+ P  SL  +L +P     L   +   ++  +  G
Sbjct: 66  HKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 593 LLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAKIFGGNQ 637
           + +L       I+HR++K  NI+     D +   K++DFG A+    ++
Sbjct: 125 MNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  110 bits (277), Expect = 8e-27
 Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 16/197 (8%)

Query: 459 NVNTVKLQDLPLFQFEELATATNN------FQLSSKLGQGGFGPVYWGR-LKDGQEIAVK 511
           ++ TV+L++ P  Q ++L   +        F +  KLG+G +G VY     + GQ +A+K
Sbjct: 1   SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60

Query: 512 RLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
           ++       L+E + E+ ++ +    ++V+  G   +  +  ++ EY    S+  ++   
Sbjct: 61  QVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--R 116

Query: 572 LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L+ + L   +   I++   +GL YLH     R IHRD+KA NILL+ E + K++DFG+A 
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAG 173

Query: 632 IFGGNQDQADTGRVVGT 648
                  + +T  V+GT
Sbjct: 174 QLTDTMAKRNT--VIGT 188

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  107 bits (270), Expect = 5e-26
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 15/179 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRN 538
           ++++L   +G G    V         +++A+KR++ +     ++E + E+  +S+  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRG 592
           +V      V  +E  L+ + +   S+  ++   +  +        +      I+  +  G
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDII-KHIVAKGEHKSGVLDESTIATILREVLEG 133

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM-AKIFGGNQDQADTGR--VVGT 648
           L YLH++     IHRD+KA NILL E+ + +I+DFG+ A +  G     +  R   VGT
Sbjct: 134 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  107 bits (269), Expect = 5e-26
 Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--SGQGLEE-FMNEVMVISKLQH 536
            +F++   LG+G FG VY  R K     +A+K L KA     G+E     EV + S L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLY 595
            N++RL G   +     LI EY P  ++    +  L+K  + D ++    I  ++  L Y
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSY 124

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
            H     R+IHRD+K  N+LL      KI+DFG + 
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV 157

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  108 bits (272), Expect = 6e-26
 Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 35/183 (19%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA-----------------SGQGLEE 523
           N++++   L QG F  +     KD +  A+K+  K+                      ++
Sbjct: 31  NDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPL-KKERLDWRK 581
           F NE+ +I+ +++   +   G  +   +++ +IYEYM N S+             LD   
Sbjct: 90  FKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSI----LKFDEYFFVLDKNY 144

Query: 582 RFNIIEGISR--------GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              I   + +           Y+H  +   I HRD+K SNIL+D+    K+SDFG ++  
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202

Query: 634 GGN 636
              
Sbjct: 203 VDK 205

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  107 bits (270), Expect = 1e-25
 Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 16/170 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS---KASGQGLEEFMNEVMVISKLQHRN 538
           F    ++G G FG VY+ R +++ + +A+K++S   K S +  ++ + EV  + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            ++  GC +      L+ EY    + D L    + K+ L   +   +  G  +GL YLH 
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHS 172

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
                +IHRD+KA NILL E    K+ DFG A         A++   VGT
Sbjct: 173 H---NMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANS--FVGT 213

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  106 bits (267), Expect = 2e-25
 Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 17/173 (9%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL-QHR 537
           +FQ  S+LG G +G V+  R K DG+  AVKR        +     + EV    K+ QH 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE--RLDWRKRFNIIEGISRGLLY 595
             VRL     EG    L  E          L    +     L   + +  +      L +
Sbjct: 118 CCVRLEQAWEEGGILYLQTELC-----GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LH      ++H D+K +NI L      K+ DFG+     G     +     G 
Sbjct: 173 LHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL-GTAGAGEV--QEGD 219

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  105 bits (265), Expect = 4e-25
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 10/177 (5%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNL 539
             ++   L +GGF  VY  + +  G+E A+KRL     +     + EV  + KL  H N+
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 540 VRLLGCCVEGEEKM-------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           V+       G+E+        L+   +    L   L     +  L       I     R 
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           + ++HR  +  IIHRDLK  N+LL  +   K+ DFG A       D + + +    +
Sbjct: 149 VQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  107 bits (268), Expect = 5e-25
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 25/167 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLV 540
           +F     LG G  G + +  + D +++AVKR+        +    EV ++ +  +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVI 81

Query: 541 RLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPL--KKERLDWRKRFNIIEGISRGLLY 595
           R    C E +++   Y   E        A L + +  K       +   +++  + GL +
Sbjct: 82  RYF--CTE-KDRQFQYIAIELCA-----ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133

Query: 596 LHRDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAKIFGGNQ 637
           LH    L I+HRDLK  NIL+       ++   ISDFG+ K     +
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  108 bits (270), Expect = 1e-24
 Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 19/180 (10%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNL 539
            +++  +LG GGFG V     +D G+++A+K+  +       E +  E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 540 VRLLGCCVEGEEKM-------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           V       +G +K+       L  EY     L   L        L       ++  IS  
Sbjct: 75  VSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133

Query: 593 LLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           L YLH     RIIHRDLK  NI+L    + L  KI D G AK     +        VGTL
Sbjct: 134 LRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTE--FVGTL 187

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  102 bits (257), Expect = 2e-24
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--SGQGLEE-FMNEVMVISKLQH 536
           ++F +   LG+G FG VY  R K     +A+K L K+    +G+E     E+ + S L+H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE-RLDWRKRFNIIEGISRGLLY 595
            N++R+     + +   L+ E+ P   L    +  L+K  R D ++    +E ++  L Y
Sbjct: 74  PNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELADALHY 129

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
            H     ++IHRD+K  N+L+  +   KI+DFG +      
Sbjct: 130 CHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  104 bits (262), Expect = 2e-24
 Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 14/180 (7%)

Query: 480 TNNFQLSSKLGQG--GFGPVYWGR-LKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKL 534
              ++L + +G+G      V   R    G+ + V+R  L   S + +     E+ V    
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N+V      +   E  ++  +M   S   L+      + ++      I++G+ + L 
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI-CTHFMDGMNELAIAYILQGVLKALD 142

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT-----GRVVGTL 649
           Y+H       +HR +KAS+IL+  +    +S          +  +           V  L
Sbjct: 143 YIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  103 bits (259), Expect = 2e-24
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 15/196 (7%)

Query: 461 NTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQ 519
           +    + L       L      F+L   +G G +G VY GR +K GQ  A+K +   +G 
Sbjct: 4   SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGD 62

Query: 520 GLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM------LIYEYMPNRSLDALLFDPL 572
             EE   E+ ++ K   HRN+    G  ++           L+ E+    S+  L+    
Sbjct: 63  EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI-KNT 121

Query: 573 KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
           K   L       I   I RGL +LH+    ++IHRD+K  N+LL E    K+ DFG++  
Sbjct: 122 KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178

Query: 633 FGGNQDQADTGRVVGT 648
                 + +T   +GT
Sbjct: 179 LDRTVGRRNT--FIGT 192

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  101 bits (255), Expect = 4e-24
 Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 18/178 (10%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHR 537
            + F    KLG G FG V+    +  G E  +K ++K   Q  +E+   E+ V+  L H 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 538 NLVRLLGCCVEGEEKMLIY---EYMPNRSL-DALLFDPLKKERLDWRKRFNIIEGISRGL 593
           N++++       E+   +Y   E      L + ++    + + L       +++ +   L
Sbjct: 81  NIIKIFEVF---EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137

Query: 594 LYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            Y H      ++H+DLK  NIL          KI DFG+A++F  ++   +     GT
Sbjct: 138 AYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGT 189

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  100 bits (252), Expect = 8e-24
 Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 31/182 (17%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
              + L + +G+G +G V     K      A K++ K   + ++ F  E+ ++  L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 539 LVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGI 589
           ++RL       E+   IY   E          LF+     R+  ++ F       I++ +
Sbjct: 68  IIRLYETF---EDNTDIYLVMELCTGGE----LFE-----RVVHKRVFRESDAARIMKDV 115

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVV 646
              + Y H   +L + HRDLK  N L      +   K+ DFG+A  F   +        V
Sbjct: 116 LSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT---KV 169

Query: 647 GT 648
           GT
Sbjct: 170 GT 171

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  100 bits (252), Expect = 9e-24
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 27/181 (14%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
              + +   LG+G FG V   + +   QE AVK ++KA    +     + EV ++ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGIS 590
            N+++L     +     ++ E          LFD      +  RKRF+      II+ + 
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGE----LFD-----EIIKRKRFSEHDAARIIKQVF 131

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            G+ Y+H   +  I+HRDLK  NILL   +++ + KI DFG++  F  N    D    +G
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIG 185

Query: 648 T 648
           T
Sbjct: 186 T 186

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  101 bits (253), Expect = 9e-24
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 22/169 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH 536
            + +   LG+G +G V      +     AVK L K        G      E+ ++ +L+H
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 537 RNLVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERL---DWRKRFN-IIEGI 589
           +N+++L+   +  EEK  +Y   EY      +  + D + ++R         F  +I+G+
Sbjct: 66  KNVIQLVDV-LYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGL 122

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                YLH      I+H+D+K  N+LL      KIS  G+A+       
Sbjct: 123 E----YLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  104 bits (260), Expect = 1e-23
 Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 27/181 (14%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
           +  +Q   KLG G +G V   R K    E A+K + K   S     + + EV V+  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGIS 590
            N+++L     +     L+ E          LFD      +  R +FN      II+ + 
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGE----LFD-----EIIHRMKFNEVDAAVIIKQVL 146

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            G+ YLH   +  I+HRDLK  N+LL   +++   KI DFG++ +F   +   +    +G
Sbjct: 147 SGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE---RLG 200

Query: 648 T 648
           T
Sbjct: 201 T 201

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  100 bits (251), Expect = 1e-23
 Identities = 48/188 (25%), Positives = 67/188 (35%), Gaps = 39/188 (20%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKR--LSKASGQGLEEFMNEVMVISKL-Q 535
           T  F    K+G G FG V+      DG   A+KR     A     +  + EV   + L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 536 HRNLVRLLGCCVEGEEKMLIY-EYMPNRSLDALLFDPLKKERLDWRKRF------NIIEG 588
           H ++VR      E +  MLI  EY    SL   +      E       F      +++  
Sbjct: 70  HSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAI-----SENYRIMSYFKEAELKDLLLQ 123

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-------------------KISDFGM 629
           + RGL Y+H      ++H D+K SNI +     P                   KI D G 
Sbjct: 124 VGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 180

Query: 630 AKIFGGNQ 637
                  Q
Sbjct: 181 VTRISSPQ 188

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  103 bits (258), Expect = 2e-23
 Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 28/182 (15%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQ 535
           ++ ++    LG+G FG V   + K  GQE AVK +SK         E  + EV ++ +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGI 589
           H N+++L     +     L+ E          LFD      +  RKRF+      II  +
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFD-----EIISRKRFSEVDAARIIRQV 135

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVV 646
             G+ Y+H   + +I+HRDLK  N+LL    ++ N +I DFG++  F  ++   D    +
Sbjct: 136 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD---KI 189

Query: 647 GT 648
           GT
Sbjct: 190 GT 191

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  102 bits (255), Expect = 4e-23
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 27/181 (14%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
              + +   LG+G FG V   + +   QE AVK ++KA    +     + EV ++ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGIS 590
            N+++L     +     ++ E          LFD      +  RKRF+      II+ + 
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGE----LFD-----EIIKRKRFSEHDAARIIKQVF 131

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            G+ Y+H   +  I+HRDLK  NILL   +++ + KI DFG++  F  N    D    +G
Sbjct: 132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIG 185

Query: 648 T 648
           T
Sbjct: 186 T 186

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 98.9 bits (247), Expect = 5e-23
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 22/181 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGL---------EEFMNEVM 529
             N++    LG+G    V     K   +E AVK +    G            E  + EV 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 530 VISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIE 587
           ++ K+  H N+++L           L+++ M    L    FD L +K  L  ++   I+ 
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMR 131

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
            +   +  LH+   L I+HRDLK  NILLD+++N K++DFG +      +   +   V G
Sbjct: 132 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCG 185

Query: 648 T 648
           T
Sbjct: 186 T 186

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  100 bits (251), Expect = 9e-23
 Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 41/195 (21%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNL 539
           N       LG G  G V +     G+ +AVKR+        +  + E+ ++++   H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 540 VRLLGCCVEGEEKMLIY---EYMPNRSLDALLFD--------PLKKERLDWRKRFNIIEG 588
           +R    C E      +Y   E       +  L D            +        +++  
Sbjct: 72  IRYY--CSE-TTDRFLYIALELC-----NLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLD-------------EELNPKISDFGMAKIFGG 635
           I+ G+ +LH    L+IIHRDLK  NIL+              E L   ISDFG+ K    
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180

Query: 636 NQD--QADTGRVVGT 648
            Q   + +     GT
Sbjct: 181 GQSSFRTNLNNPSGT 195

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 97.7 bits (244), Expect = 2e-22
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 14/174 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKAS---GQGLEEFMNEVMVISKLQH 536
            +F+    LG+G F  V   R        A+K L K        +     E  V+S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRGLL 594
              V+L     + E+      Y  N  L       ++K     +   RF   E I   L 
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGEL----LKYIRKIGSFDETCTRFYTAE-IVSALE 144

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           YLH      IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VGT
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 195

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 97.9 bits (244), Expect = 3e-22
 Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 21/180 (11%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQG--------LEEFMNEVMV 530
              +     +G+G    V     +  G E AVK +   + +          E    E  +
Sbjct: 93  YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152

Query: 531 ISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEG 588
           + ++  H +++ L+          L+++ M    L    FD L +K  L  ++  +I+  
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRS 208

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +   + +LH      I+HRDLK  NILLD+ +  ++SDFG +      +   +   + GT
Sbjct: 209 LLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE---LCGT 262

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 96.6 bits (241), Expect = 3e-22
 Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 46/196 (23%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK-------------------ASGQG 520
           N + L  ++G+G +G V       D    A+K LSK                    +  G
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72

Query: 521 LEEFMN-------EVMVISKLQHRNLVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFD 570
             +          E+ ++ KL H N+V+L+   ++   +  +Y   E +    +     +
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPV----ME 127

Query: 571 PLKKERLD---WRKRFN-IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISD 626
               + L     R  F  +I+GI     YLH     +IIHRD+K SN+L+ E+ + KI+D
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIE----YLHY---QKIIHRDIKPSNLLVGEDGHIKIAD 180

Query: 627 FGMAKIFGGNQDQADT 642
           FG++  F G+      
Sbjct: 181 FGVSNEFKGSDALLSN 196

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 96.1 bits (240), Expect = 3e-22
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++    S +  ++   E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLY 595
            N+VRL     E     L+++ +        LF+ +  +E        + I+ I   + Y
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 120

Query: 596 LHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            H      I+HR+LK  N+LL    +    K++DFG+A     ++         GT
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGT 170

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 97.9 bits (244), Expect = 5e-22
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 15/174 (8%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            + + +  +LG G FG V+    K  G+    K ++           NE+ ++++L H  
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL--KKERLDWRKRFNIIEGISRGLLYL 596
           L+ L     +  E +LI E++        LFD +  +  ++   +  N +     GL ++
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165

Query: 597 HRDSRLRIIHRDLKASNILL--DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           H      I+H D+K  NI+    +  + KI DFG+A     ++          T
Sbjct: 166 H---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTAT 213

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 97.4 bits (242), Expect = 5e-22
 Identities = 23/202 (11%), Positives = 48/202 (23%), Gaps = 36/202 (17%)

Query: 466 QDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK---ASGQGL 521
           Q+        L+      +L   L  G    V+  R  +  ++ A+K  +     S   L
Sbjct: 47  QNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSEL 106

Query: 522 EEFMNEVMVISKLQHRNLVRLLGCC----------VEGEEKM----------------LI 555
           E         ++L   +                  V+ +                   L+
Sbjct: 107 ERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLL 166

Query: 556 YEYMP---NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKAS 612
                         L F  + +          +   + R    L       ++H      
Sbjct: 167 MPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPD 223

Query: 613 NILLDEELNPKISDFGMAKIFG 634
           N+ +  +    + D       G
Sbjct: 224 NLFIMPDGRLMLGDVSALWKVG 245

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 96.8 bits (241), Expect = 7e-22
 Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 21/203 (10%)

Query: 448 RKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQ 506
            ++   +L A      K+ +L    FE++          S+LG G  G V+    K  G 
Sbjct: 10  DEQQRKRLEAFLTQKQKVGELKDDDFEKI----------SELGAGNGGVVFKVSHKPSGL 59

Query: 507 EIAVKRLS-KASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD 565
            +A K +  +       + + E+ V+ +     +V   G      E  +  E+M   SLD
Sbjct: 60  VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 119

Query: 566 ALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS 625
            +L    K  R+  +    +   + +GL YL    + +I+HRD+K SNIL++     K+ 
Sbjct: 120 QVL---KKAGRIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLC 174

Query: 626 DFGMAKIFGGNQDQADTGRVVGT 648
           DFG++         A++   VGT
Sbjct: 175 DFGVSGQL--IDSMANS--FVGT 193

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 98.8 bits (246), Expect = 8e-22
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 15/174 (8%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            +++ +  +LG G FG V+    +  G   A K +        E    E+  +S L+H  
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL--KKERLDWRKRFNIIEGISRGLLYL 596
           LV L     +  E ++IYE+M        LF+ +  +  ++   +    +  + +GL ++
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271

Query: 597 HRDSRLRIIHRDLKASNILL--DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           H       +H DLK  NI+         K+ DFG+       Q         GT
Sbjct: 272 H---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGT 319

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 98.3 bits (245), Expect = 1e-21
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           + F     LG+GGFG V+  ++K   ++ A K+L+K      +G +  M E  +++K+  
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGL 593
           R +V L     E +  + L+   M    +   +++  +      + R  F   + I  GL
Sbjct: 245 RFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-IVSGL 302

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            +LH+     II+RDLK  N+LLD++ N +ISD G+A      Q +       GT
Sbjct: 303 EHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG--YAGT 352

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 96.7 bits (241), Expect = 1e-21
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 15/172 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
               +  LG G FG V+       G ++A K +     +  EE  NE+ V+++L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL--KKERLDWRKRFNIIEGISRGLLYLHR 598
           +L        + +L+ EY+        LFD +  +   L        ++ I  G+ ++H 
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQICEGIRHMH- 204

Query: 599 DSRLRIIHRDLKASNILL-DEELNP-KISDFGMAKIFGGNQDQADTGRVVGT 648
             ++ I+H DLK  NIL  + +    KI DFG+A+ +   +         GT
Sbjct: 205 --QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGT 251

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 95.5 bits (238), Expect = 1e-21
 Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 21/183 (11%)

Query: 455 LSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRL 513
           +S  +   +K+     + F        + +   ++G+G +G V     K  GQ +AVKR+
Sbjct: 1   MSIESSGKLKISPEQHWDFT-----AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI 55

Query: 514 -SKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDP 571
            S    +  ++ + ++ V+ +      +V+  G      +  +  E M + S D      
Sbjct: 56  RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFY--- 111

Query: 572 LKKERLDWRKRFN------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS 625
            K                 I     + L +L     L+IIHRD+K SNILLD   N K+ 
Sbjct: 112 -KYVYSVLDDVIPEEILGKITLATVKALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLC 168

Query: 626 DFG 628
           DFG
Sbjct: 169 DFG 171

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 24/162 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNL 539
           ++ L   LG+G +G V         + +AVK +         E    E+ +   L H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67

Query: 540 VRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISR 591
           V+  G      E  + Y   EY     L    FD +     +   D ++ F+ ++ G+  
Sbjct: 68  VKFYGHR---REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV- 119

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              YLH    + I HRD+K  N+LLDE  N KISDFG+A +F
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 95.1 bits (237), Expect = 2e-21
 Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 21/161 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRN 538
           N++L   +G+G F  V   R +  G+E+A+K + K   +   L++   EV ++  L H N
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75

Query: 539 LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISRG 592
           +V+L    +E E+ + LI EY     +    FD L    R+   + R +F  I+  +   
Sbjct: 76  IVKLFEV-IETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSKFRQIVSAVQ-- 128

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
             Y H+    RI+HRDLKA N+LLD ++N KI+DFG +  F
Sbjct: 129 --YCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 97.5 bits (243), Expect = 2e-21
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 38/192 (19%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-------------SGQGLEEFM 525
             ++    KLG G +G V   + K    E A+K + K+               +  EE  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN- 584
           NE+ ++  L H N+++L     + +   L+ E+     L    F+     ++  R +F+ 
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FE-----QIINRHKFDE 145

Query: 585 -----IIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGN 636
                I++ I  G+ YLH+     I+HRD+K  NILL   +  LN KI DFG++  F  +
Sbjct: 146 CDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

Query: 637 QDQADTGRVVGT 648
               D    +GT
Sbjct: 203 YKLRD---RLGT 211

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 95.2 bits (237), Expect = 2e-21
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 24/166 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--------SGQGLEEFMNEVMVIS 532
            +   S LG G FG V+     +  +E+ VK + K             L +   E+ ++S
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLD---WRKRFN-IIE 587
           +++H N++++L      E +      M        LF  + +  RLD       F  ++ 
Sbjct: 85  RVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
            +     YL       IIHRD+K  NI++ E+   K+ DFG A   
Sbjct: 142 AVG----YLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 94.7 bits (236), Expect = 2e-21
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 21/171 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--------FMNEVMV 530
            + + +S  LG G  G V     +   +++A+K +SK                   E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGI 589
           + KL H  ++++     + E+  ++ E M    L    FD +   +RL           +
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQM 123

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQ 637
              + YLH      IIHRDLK  N+LL   +E+   KI+DFG +KI G   
Sbjct: 124 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 95.0 bits (237), Expect = 2e-21
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN-----EVMVISKL 534
             ++    LG+G F  VY  R     Q +A+K++        ++ +N     E+ ++ +L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N++ LL          L++++M    L+ ++ D          K +  +    +GL 
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAY--MLMTLQGLE 126

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           YLH+     I+HRDLK +N+LLDE    K++DFG+AK FG
Sbjct: 127 YLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 94.2 bits (235), Expect = 3e-21
 Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 20/162 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEF--------MNEVMVIS 532
             +Q   K+G+G +G VY  +   G+ +A+KR+       L+          + E+ ++ 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           +L H N+V L+          L++E+M    L  +L +     +    K +  +  + RG
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIY--LYQLLRG 131

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           + + H+    RI+HRDLK  N+L++ +   K++DFG+A+ FG
Sbjct: 132 VAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 94.3 bits (235), Expect = 3e-21
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 24/162 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRNL 539
           ++ L   LG+G +G V         + +AVK +         E    E+ +   L H N+
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67

Query: 540 VRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISR 591
           V+  G      E  + Y   EY     L    FD +     +   D ++ F+ ++ G+  
Sbjct: 68  VKFYGHR---REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV- 119

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              YLH    + I HRD+K  N+LLDE  N KISDFG+A +F
Sbjct: 120 ---YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 93.8 bits (234), Expect = 3e-21
 Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 26/179 (14%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
              F     LG G F  V+  + +  G+  A+K + K+         NE+ V+ K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGISRG 592
           +V L           L+ + +        LFD     R+  R  +       +I+ +   
Sbjct: 68  IVTLEDIYESTTHYYLVMQLVSGGE----LFD-----RILERGVYTEKDASLVIQQVLSA 118

Query: 593 LLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           + YLH      I+HRDLK  N+L    +E     I+DFG++K+              GT
Sbjct: 119 VKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGT 170

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 94.7 bits (236), Expect = 3e-21
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 25/181 (13%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVK-----RLSKASGQGLEEFMNEVMVISKLQH 536
           ++L   +G+G F  V     ++ GQ+ AVK     + + + G   E+   E  +   L+H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGIS 590
            ++V LL          +++E+M      A L   +  +R D    +      + +  I 
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDG----ADLCFEI-VKRADAGFVYSEAVASHYMRQIL 140

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
             L Y H      IIHRD+K   +LL   +     K+  FG+A   G +   A     VG
Sbjct: 141 EALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG--RVG 195

Query: 648 T 648
           T
Sbjct: 196 T 196

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 97.2 bits (242), Expect = 4e-21
 Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 25/175 (14%)

Query: 483 FQLSSKLGQGGFGPVYWG---RLKDGQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHRN 538
           +++   +  GG G +Y      + +G+ + +K L  +     +   M E   ++++ H +
Sbjct: 82  YEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140

Query: 539 LVRLL--GCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           +V++       +     + Y   EY+  +SL          ++L   +    +  I   L
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK-----GQKLPVAEAIAYLLEILPAL 195

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            YLH    + +++ DLK  NI+L EE   K+ D G              G + GT
Sbjct: 196 SYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN------SFGYLYGT 240

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 93.0 bits (232), Expect = 4e-21
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 20/162 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEF--------MNEVMVIS 532
             +    K+G+G +G VY  +   G+  A+K++       LE+         + E+ ++ 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
           +L+H N+V+L       +  +L++E++    L  LL            K F  +  +  G
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSF--LLQLLNG 112

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           + Y H     R++HRDLK  N+L++ E   KI+DFG+A+ FG
Sbjct: 113 IAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 93.1 bits (232), Expect = 4e-21
 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRL-SKASGQGLEEFMNEVMVISKL-QHR 537
           ++ +   +LG+G +G V   R    GQ +AVKR+ +  + Q  +  + ++ +  +     
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISR 591
             V   G      +  +  E M + SLD        K+ +D  +         I   I +
Sbjct: 67  FTVTFYGALFREGDVWICMELM-DTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVK 120

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG 628
            L +LH  S+L +IHRD+K SN+L++     K+ DFG
Sbjct: 121 ALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFG 155

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 95.1 bits (237), Expect = 5e-21
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 21/171 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--------FMNEVMV 530
            + + +S  LG G  G V     +   +++A++ +SK                   E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGI 589
           + KL H  ++++     + E+  ++ E M    L    FD +   +RL           +
Sbjct: 194 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQM 248

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQ 637
              + YLH      IIHRDLK  N+LL   +E+   KI+DFG +KI G   
Sbjct: 249 LLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 94.9 bits (236), Expect = 5e-21
 Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 24/182 (13%)

Query: 485 LSSKLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQGLE-EFMNEVMVISKLQHRNLV 540
              K+G+G +G VY  + KD    ++ A+K++      G+      E+ ++ +L+H N++
Sbjct: 25  EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG---TGISMSACREIALLRELKHPNVI 81

Query: 541 RLLGCCVEGEEK--MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRG 592
            L    +   ++   L+++Y     L  ++      +      +        ++  I  G
Sbjct: 82  SLQKVFLSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGG-NQDQADTGRVVG 647
           + YLH +    ++HRDLK +NIL+  E       KI+D G A++F    +  AD   VV 
Sbjct: 141 IHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 197

Query: 648 TL 649
           T 
Sbjct: 198 TF 199

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 93.5 bits (233), Expect = 7e-21
 Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 29/187 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEF----MNEVMVISK 533
           + ++  +K+GQG FG V+  R  K GQ++A+K   +        E F    + E+ ++  
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK----EGFPITALREIKILQL 72

Query: 534 LQHRNLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
           L+H N+V L+  C               L++++  +  L  LL + L K  L   KR   
Sbjct: 73  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV-- 129

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD---T 642
           ++ +  GL Y+HR+   +I+HRD+KA+N+L+  +   K++DFG+A+ F   ++      T
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYT 186

Query: 643 GRVVGTL 649
            RVV TL
Sbjct: 187 NRVV-TL 192

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 22/181 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA------SGQGLEEFMNEVMVIS 532
            +++++  +LG G F  V   R K  G+E A K + K        G   EE   EV ++ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
           +++H N++ L        + +LI E +        LFD L +KE L   +    ++ I  
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELVSGGE----LFDFLAEKESLTEDEATQFLKQILD 119

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTGRVVG 647
           G+ YLH     RI H DLK  NI+L ++  P    K+ DFG+A       +  +   + G
Sbjct: 120 GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFG 173

Query: 648 T 648
           T
Sbjct: 174 T 174

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 93.5 bits (233), Expect = 1e-20
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
           ++N+ +  +LG+G F  V     K  G E A K ++    S +  ++   E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLY 595
            N+VRL     E     L+++ +        LF+ +  +E        + I+ I   + Y
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 143

Query: 596 LHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            H      I+HR+LK  N+LL    +    K++DFG+A     ++         GT
Sbjct: 144 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGT 193

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 92.6 bits (231), Expect = 1e-20
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 41/192 (21%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQGLEEFMN-----EVM 529
           ++++ F+   KLG G +  VY G     G  +A+K  +L        EE        E+ 
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS------EEGTPSTAIREIS 55

Query: 530 VISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           ++ +L+H N+VRL        +  L++E+M     D      LKK  +D R   N   G+
Sbjct: 56  LMKELKHENIVRLYDVIHTENKLTLVFEFM---DND------LKKY-MDSRTVGNTPRGL 105

Query: 590 S------------RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                        +GL + H +   +I+HRDLK  N+L+++    K+ DFG+A+ F G  
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIP 161

Query: 638 DQADTGRVVGTL 649
               +  VV TL
Sbjct: 162 VNTFSSEVV-TL 172

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 92.3 bits (230), Expect = 1e-20
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 22/181 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA------SGQGLEEFMNEVMVIS 532
            + + +  +LG G F  V   R K  G E A K + K        G   EE   EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
           ++ H N++ L        + +LI E +        LFD L +KE L   +  + I+ I  
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTGRVVG 647
           G+ YLH     +I H DLK  NI+L ++  P    K+ DFG+A       +  +   + G
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFG 180

Query: 648 T 648
           T
Sbjct: 181 T 181

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 91.5 bits (228), Expect = 1e-20
 Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 17/173 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQG-LEEFMNEVMVISKLQHRN 538
           +++  KLG GG   VY         ++A+K   +     +  L+ F  EV   S+L H+N
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72

Query: 539 LVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           +V ++      EE    Y   EY+   +L   +        L      N    I  G+ +
Sbjct: 73  IVSMI---DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKH 126

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            H    +RI+HRD+K  NIL+D     KI DFG+AK          T  V+GT
Sbjct: 127 AHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQTNHVLGT 175

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 92.8 bits (231), Expect = 2e-20
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 22/181 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKAS------GQGLEEFMNEVMVIS 532
            + + +  +LG G F  V   R K  G E A K + K        G   EE   EV ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
           ++ H N++ L        + +LI E +        LFD L +KE L   +  + I+ I  
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTGRVVG 647
           G+ YLH     +I H DLK  NI+L ++  P    K+ DFG+A       +  +   + G
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFG 180

Query: 648 T 648
           T
Sbjct: 181 T 181

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)

Query: 489 LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCC 546
           LG+G    V         QE AVK + K  G        EV ++ + Q HRN++ L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80

Query: 547 VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRGLLYLHRDS 600
            E +   L++E M   S+            +  R+ FN      +++ ++  L +LH   
Sbjct: 81  EEEDRFYLVFEKMRGGSI----LS-----HIHKRRHFNELEASVVVQDVASALDFLHN-- 129

Query: 601 RLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGR-----VVGT 648
              I HRDLK  NIL    ++    KI DF +      N D +           G+
Sbjct: 130 -KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 93.2 bits (231), Expect = 2e-20
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 38/194 (19%)

Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH-------- 536
           LGQ            + G+   V             +++   EV+ +  L+         
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145

Query: 537 --------RNLVRLLGCC-----VEGEEKMLIYEY---MPNRS------LDALLFDPLKK 574
                    +LV+             E  M +       P          + LL      
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205

Query: 575 ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           + L    R  +   + R L  LH      ++H  L+  +I+LD+     ++ F      G
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 262

Query: 635 GNQDQADTGRVVGT 648
            +   +  GR    
Sbjct: 263 ASA-VSPIGRGFAP 275

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 94.2 bits (234), Expect = 3e-20
 Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 23/178 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMV---ISK 533
           N+F +   +G+GGFG VY  R  D  ++ A+K L K      QG    +NE ++   +S 
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGIS 590
                +V +        +K+  I + M    L       L +  +  +   RF   E I 
Sbjct: 249 GDCPFIVCM-SYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFYAAE-II 302

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            GL ++H      +++RDLK +NILLDE  + +ISD G+A  F   +        VGT
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGT 353

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 92.4 bits (230), Expect = 3e-20
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 34/171 (19%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRN 538
              +     +G G FG V+  +L +  E+A+K++ +      + F N E+ ++  ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93

Query: 539 LVRLLGCCVEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG---- 588
           +V L        +K       L+ EY+P         + + +    + K    +      
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP---------ETVYRASRHYAKLKQTMPMLLIK 144

Query: 589 -----ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
                + R L Y+H    + I HRD+K  N+LLD      K+ DFG AKI 
Sbjct: 145 LYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 93.7 bits (233), Expect = 3e-20
 Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N F+    LG+GGFG V   +++   ++ A K+L K      +G    +NE  ++ K+  
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDW----RKRFNIIEGISR 591
           R +V L     E ++ + L+   M    L       +           R  F   E I  
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDL----KFHIYHMGQAGFPEARAVFYAAE-ICC 297

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           GL  LHR    RI++RDLK  NILLD+  + +ISD G+A      Q
Sbjct: 298 GLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 25/167 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN------EVMVISKL 534
            +Q+   LG GGFG VY G  + D   +A+K + K       E  N      EV+++ K+
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103

Query: 535 QHR--NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLD---WRKRFN-IIE 587
                 ++RLL      +  +LI E  P    D  LFD + ++  L     R  F  ++E
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLE 160

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIF 633
            +     + H      ++HRD+K  NIL+D      K+ DFG   + 
Sbjct: 161 AVR----HCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 90.3 bits (225), Expect = 4e-20
 Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 20/163 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF--------MNEVMVI 531
            NFQ   K+G+G +G VY  R    G+ +A+K++       L+          + E+ ++
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
            +L H N+V+LL       +  L++E++  + L   + D      +      + +  + +
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQ 114

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           GL + H     R++HRDLK  N+L++ E   K++DFG+A+ FG
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 90.3 bits (225), Expect = 4e-20
 Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 21/163 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF--------MNEVMVI 531
             ++   K+G+G +G V+  +  +  + +A+KR+       L++         + E+ ++
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
            +L+H+N+VRL       ++  L++E+     L             +  K F  +  + +
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSF--LFQLLK 112

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           GL + H      ++HRDLK  N+L++     K+++FG+A+ FG
Sbjct: 113 GLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 90.7 bits (226), Expect = 4e-20
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 20/162 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE-------FMNEVMVIS 532
             +    KLG+G +  VY G+ K     +A+K +       LE         + EV ++ 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR------LEHEEGAPCTAIREVSLLK 55

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG 592
            L+H N+V L       +   L++EY+ ++ L   L D      +   K F  +  + RG
Sbjct: 56  DLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRG 112

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           L Y HR    +++HRDLK  N+L++E    K++DFG+A+   
Sbjct: 113 LAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 91.0 bits (226), Expect = 5e-20
 Identities = 43/217 (19%), Positives = 70/217 (32%), Gaps = 52/217 (23%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVK-----RLSKASGQGLEEFMNEVMVISK 533
              + L   +GQG +G V            A+K     ++ + + + +E    EV ++ K
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 534 LQHRNLVRLLGCCVEGEEKM-LIYEYM-------------------------------PN 561
           L H N+ RL     E E+ + L+ E                                   
Sbjct: 85  LHHPNIARLYEVY-EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143

Query: 562 RSLDALLFDPLKKERLDWRKRFN------IIEGISRGLLYLHRDSRLRIIHRDLKASNIL 615
              +  +   +   R              I+  I   L YLH      I HRD+K  N L
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFL 200

Query: 616 L--DEELNPKISDFGMAKIFGGNQ--DQADTGRVVGT 648
              ++    K+ DFG++K F      +        GT
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 90.8 bits (226), Expect = 5e-20
 Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 16/174 (9%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
              + ++  LG+G FG V+        +    K +    G        E+ +++  +HRN
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRN 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL--KKERLDWRKRFNIIEGISRGLLYL 596
           ++ L       EE ++I+E++        +F+ +      L+ R+  + +  +   L +L
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCEALQFL 118

Query: 597 HRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQDQADTGRVVGT 648
           H      I H D++  NI+     +   KI +FG A+      +      +   
Sbjct: 119 H---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTA 166

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 91.2 bits (226), Expect = 5e-20
 Identities = 25/175 (14%), Positives = 49/175 (28%), Gaps = 30/175 (17%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKASGQGLEEFMNEVMVISK 533
           +    +   LG+G F  VY     D       Q+  +K    A+          +  +  
Sbjct: 64  SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIE 587
                 ++     +     +L+ E     +    L + +   +    K            
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGT----LLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 588 GISRGLLYLHRDSRLRIIHRDLKASNILL-----------DEELNPKISDFGMAK 631
            +   +  +H      IIH D+K  N +L           D      + D G + 
Sbjct: 180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSI 231

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 89.2 bits (222), Expect = 7e-20
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
           ++ L   LG G FG V  G     G ++AVK L++    S   + +   E+  +   +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISR 591
           ++++L    +       ++ EY+    L    FD + K  R+   + R+ F  I+  +  
Sbjct: 72  HIIKLYQV-ISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVD- 125

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              Y HR     ++HRDLK  N+LLD  +N KI+DFG++ + 
Sbjct: 126 ---YCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 89.9 bits (224), Expect = 8e-20
 Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN--EVMVISKLQHR 537
             ++   K+G+G +G V+  R +D GQ +A+K+  ++    + + +   E+ ++ +L+H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           NLV LL          L++EY  + ++   L     +  +      +I     + + + H
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCH 119

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           +      IHRD+K  NIL+ +    K+ DFG A++  
Sbjct: 120 KH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 90.0 bits (224), Expect = 9e-20
 Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 22/181 (12%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA------SGQGLEEFMNEVMVIS 532
            + +    +LG G F  V   R K  G + A K + K        G   E+   EV ++ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 533 KLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISR 591
           ++QH N++ L        + +LI E +        LFD L +KE L   +    ++ I  
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILELVAGGE----LFDFLAEKESLTEEEATEFLKQILN 125

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTGRVVG 647
           G+ YLH    L+I H DLK  NI+L +   P    KI DFG+A       +  +   + G
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFG 179

Query: 648 T 648
           T
Sbjct: 180 T 180

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 89.6 bits (223), Expect = 9e-20
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVK--RLSKASGQG-LEEFMNEVMVISKLQHRN 538
           ++L   LG GG   V+  R L+D +++AVK  R   A        F  E    + L H  
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73

Query: 539 LVRLL--GCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           +V +   G   E     L Y   EY+   +L  ++     +  +  ++   +I    + L
Sbjct: 74  IVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQAL 129

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK-IFGGNQDQADTGRVVGT 648
            + H+     IIHRD+K +NI++      K+ DFG+A+ I         T  V+GT
Sbjct: 130 NFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 91.2 bits (227), Expect = 1e-19
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 26/181 (14%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEE--FMNEVMVISKLQH 536
           T  +QL  +LG+G F  V        GQE A   ++       +      E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGIS 590
            N+VRL     E     LI++ +        LF+      +  R+ +      + I+ I 
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGE----LFE-----DIVAREYYSEADASHCIQQIL 120

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
             +L+ H   ++ ++HR+LK  N+LL    +    K++DFG+A    G Q         G
Sbjct: 121 EAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAG 175

Query: 648 T 648
           T
Sbjct: 176 T 176

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 91.4 bits (227), Expect = 1e-19
 Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 22/162 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
           ++ L   LG G FG V  G+    G ++AVK L++    S   + +   E+  +   +H 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISR 591
           ++++L    +     + ++ EY+    L    FD + K  RL   + R+ F  I+ G+  
Sbjct: 77  HIIKLYQV-ISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVD- 130

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              Y HR     ++HRDLK  N+LLD  +N KI+DFG++ + 
Sbjct: 131 ---YCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 90.5 bits (225), Expect = 2e-19
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 37/185 (20%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHR 537
             ++  +  +G G FG VY  +L D G+ +A+K++ +      + F N E+ ++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107

Query: 538 NLVRLLGCCVEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG--- 588
           N+VRL        EK       L+ +Y+P         + + +    + +    +     
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP---------ETVYRVARHYSRAKQTLPVIYV 158

Query: 589 ------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFGGNQDQAD 641
                 + R L Y+H      I HRD+K  N+LLD +    K+ DFG AK     + + +
Sbjct: 159 KLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPN 213

Query: 642 TGRVV 646
              + 
Sbjct: 214 VSYIC 218

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 89.2 bits (222), Expect = 2e-19
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 19/176 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVK--RLSKASGQGLEEF----MNEVMVISK 533
             ++    +G+G +G V   R KD G+ +A+K    S       +      M E+ ++ +
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD----KMVKKIAMREIKLLKQ 80

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           L+H NLV LL  C + +   L++E++ + ++   L        LD++     +  I  G+
Sbjct: 81  LRHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLEL--FPNGLDYQVVQKYLFQIINGI 137

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
            + H      IIHRD+K  NIL+ +    K+ DFG A+       +     V  T 
Sbjct: 138 GFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVA-TR 188

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 88.8 bits (221), Expect = 2e-19
 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 39/174 (22%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEF--------MNEVMVI 531
           + ++  +KLG+G +G VY        + +A+KR+       LE          + EV ++
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87

Query: 532 SKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS- 590
            +LQHRN++ L           LI+EY      D      LKK  +D     ++    S 
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYA---END------LKK-YMDKNPDVSMRVIKSF 137

Query: 591 -----RGLLYLHRDSRLRIIHRDLKASNILLDEELNP-----KISDFGMAKIFG 634
                 G+ + H     R +HRDLK  N+LL           KI DFG+A+ FG
Sbjct: 138 LYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 88.9 bits (221), Expect = 2e-19
 Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 28/200 (14%)

Query: 460 VNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASG 518
           + TV +  +           T+ +++   +G G +        K    E AVK + K+  
Sbjct: 1   MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR 60

Query: 519 QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD 578
              EE   E++ +   QH N++ L     +G+   ++ E M    L     D     ++ 
Sbjct: 61  DPTEE--IEIL-LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL----LD-----KIL 108

Query: 579 WRKRFN------IIEGISRGLLYLHRDSRLRIIHRDLKASNILL-DEELNP---KISDFG 628
            +K F+      ++  I++ + YLH      ++HRDLK SNIL  DE  NP   +I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFG 165

Query: 629 MAKIFGGNQDQADTGRVVGT 648
            AK          T     T
Sbjct: 166 FAKQLRAENGLLMT--PCYT 183

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 88.2 bits (219), Expect = 3e-19
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 8/153 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRL-SKASGQGLEEFMNEVMVISKL-QHR 537
           N+ +   ++G G  G V+  R +  G  IAVK++    + +  +  + ++ V+ K     
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
            +V+  G  +   +  +  E M     +        +  +  R    +   I + L YL 
Sbjct: 85  YIVQCFGTFITNTDVFIAMELM-GTCAE--KLKKRMQGPIPERILGKMTVAIVKALYYLK 141

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
              +  +IHRD+K SNILLDE    K+ DFG++
Sbjct: 142 --EKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 88.5 bits (220), Expect = 3e-19
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 23/162 (14%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
            + +   LG+G FG V      K  Q++A+K +S+              E+  +  L+H 
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69

Query: 538 NLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISR 591
           ++++L    +     + ++ EY         LFD + +K+R+   + R+ F  II  I  
Sbjct: 70  HIIKLYDV-ITTPTDIVMVIEYAGGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIE- 122

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
              Y HR    +I+HRDLK  N+LLD+ LN KI+DFG++ I 
Sbjct: 123 ---YCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 88.5 bits (219), Expect = 4e-19
 Identities = 25/180 (13%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 489 LGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQ--------- 535
           LGQ            + G+   V             +++   EV+ +  L+         
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 536 ----------------HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-----KK 574
                            + ++R+     +       + Y   +S      + L       
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 575 ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           + L    R  +   + R L  LH      ++H  L+  +I+LD+     ++ F      G
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 257

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 88.1 bits (219), Expect = 6e-19
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQH 536
           ++F++   +G+G FG V   +  D +++ A+K ++K       E      E+ ++  L+H
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGL 593
             LV L     + EE M ++ + +    L       L++     +   +  I E +   L
Sbjct: 75  PFLVNLW-YSFQDEEDMFMVVDLLLGGDL----RYHLQQNVHFKEETVKLFICE-LVMAL 128

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            YL      RIIHRD+K  NILLDE  +  I+DF +A +     
Sbjct: 129 DYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 86.6 bits (215), Expect = 9e-19
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 27/169 (15%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN------EV----MV 530
            ++L   LG+GGFG V+ G  L D  ++A+K + +    G     +      EV     V
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91

Query: 531 ISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLD---WRKRFN-I 585
            +   H  ++RLL      E  ML+ E  P  + D  LFD + +K  L     R  F  +
Sbjct: 92  GAGGGHPGVIRLLDWFETQEGFMLVLER-PLPAQD--LFDYITEKGPLGEGPSRCFFGQV 148

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIF 633
           +  I     + H      ++HRD+K  NIL+D      K+ DFG   + 
Sbjct: 149 VAAIQ----HCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL 190

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
           ++ F++ S+LG+G    VY  + K   +  A+K L K   +  +    E+ V+ +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF------NIIEGISRG 592
           +++L        E  L+ E +    L    FD     R+  +  +      + ++ I   
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FD-----RIVEKGYYSERDAADAVKQILEA 160

Query: 593 LLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           + YLH      I+HRDLK  N+L      +   KI+DFG++KI            V GT
Sbjct: 161 VAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT---VCGT 213

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 19/170 (11%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEF----MNEVMVIS 532
           AT+ ++  +++G G +G VY  R    G  +A+K +     G G        + EV ++ 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 533 KLQ---HRNLVRLLGCCVEGEEK-----MLIYEYMPNRSLDALLFDPLKKERLDWRKRFN 584
           +L+   H N+VRL+  C            L++E++ ++ L   L D      L      +
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124

Query: 585 IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
           ++    RGL +LH +    I+HRDLK  NIL+      K++DFG+A+I+ 
Sbjct: 125 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYS 171

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 85.4 bits (212), Expect = 2e-18
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 17/174 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK--ASGQG-LEEFMNEVMVISKLQHRN 538
           ++L   +G+GG G VY        + +A+K +S+  +S          E     +LQ  +
Sbjct: 36  YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH 95

Query: 539 LVRLLGCCVEGEEKMLIY---EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           +V +      GE    +Y     +    L A+L    ++  L   +   I+  I   L  
Sbjct: 96  VVPIHD---FGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDA 149

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
            H        HRD+K  NIL+  +    + DFG+A      +     G  VGTL
Sbjct: 150 AHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTL 199

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 54/213 (25%), Positives = 83/213 (38%), Gaps = 32/213 (15%)

Query: 447 KRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSK-LGQGGFGPVYWGRLKD- 504
                   L   N+    +++             N + L+SK LG+G F  V     K  
Sbjct: 5   HHHSSGVDLGTENLYFQSMENF-----------NNFYILTSKELGRGKFAVVRQCISKST 53

Query: 505 GQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHR-NLVRLLGCCVEGEEKMLIYEYMPN 561
           GQE A K L K         E ++E+ V+   +    ++ L        E +LI EY   
Sbjct: 54  GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113

Query: 562 RSLDALLFDPLKKERLDW---RKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL-- 616
             +    F     E  +         +I+ I  G+ YLH+     I+H DLK  NILL  
Sbjct: 114 GEI----FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSS 166

Query: 617 -DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
                + KI DFGM++  G   +  +   ++GT
Sbjct: 167 IYPLGDIKIVDFGMSRKIGHACELRE---IMGT 196

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 29/196 (14%)

Query: 447 KRKEVIAKLSATNVNTVKLQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQ 506
            +++ + K    + NT +L       F+ + T          LG G FG V   + K+  
Sbjct: 22  AKEDFLKKWETPSQNTAQLDQ-----FDRIKT----------LGTGSFGRVMLVKHKESG 66

Query: 507 EI-AVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNR 562
              A+K L K      + +E  +NE  ++  +    LV+L     +     ++ EY+   
Sbjct: 67  NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126

Query: 563 SLDALLFDPLKKERL--DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL 620
            +    F  L++     +   RF   + I     YLH    L +I+RDLK  N+L+D++ 
Sbjct: 127 EM----FSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQG 178

Query: 621 NPKISDFGMAKIFGGN 636
             +++DFG AK   G 
Sbjct: 179 YIQVTDFGFAKRVKGR 194

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 85.0 bits (211), Expect = 3e-18
 Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 28/172 (16%)

Query: 488 KLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGC 545
            LG+G F        K   Q  AVK +SK           E+  +   + H N+V+L   
Sbjct: 18  PLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEV 74

Query: 546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------IIEGISRGLLYLHRD 599
             +     L+ E +    L    F+     R+  +K F+      I+  +   + ++H  
Sbjct: 75  FHDQLHTFLVMELLNGGEL----FE-----RIKKKKHFSETEASYIMRKLVSAVSHMHD- 124

Query: 600 SRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             + ++HRDLK  N+L    ++ L  KI DFG A++   +     T     T
Sbjct: 125 --VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFT 172

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 84.9 bits (211), Expect = 3e-18
 Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQH 536
            +FQ+   LG G FG V+  R +      A+K L K     L++     +E +++S + H
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGLL 594
             ++R+ G   + ++  +I +Y+    L    F  L+K +   +   +F   E +   L 
Sbjct: 66  PFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAE-VCLALE 120

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG 635
           YLH      II+RDLK  NILLD+  + KI+DFG AK    
Sbjct: 121 YLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 84.5 bits (209), Expect = 7e-18
 Identities = 41/218 (18%), Positives = 68/218 (31%), Gaps = 56/218 (25%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRN 538
            +F+    +G+GGFG V+  + K D    A+KR+         E+ M EV  ++KL+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNII------------ 586
           +VR     +E   +    E       D     PL            I             
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 587 ---------------EGISRGLLYLHRDSRL---------------------------RI 604
                          +   +  L    + R                             +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185

Query: 605 IHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           +HRDLK SNI    +   K+ DFG+      ++++   
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 85.1 bits (211), Expect = 8e-18
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 14/173 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNEVMVISKLQH 536
            ++++   +G+G FG V   R K  +++ A+K LSK       +   F  E  +++    
Sbjct: 69  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD-WRKRFNIIEGISRGLLY 595
             +V+L     +     ++ EYMP   L     + +    +     RF   E +   L  
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDL----VNLMSNYDVPEKWARFYTAEVVL-ALDA 183

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +H    +  IHRD+K  N+LLD+  + K++DFG                 VGT
Sbjct: 184 IHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGT 232

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 83.2 bits (206), Expect = 3e-17
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 22/161 (13%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN-EVMVISKLQHRNL 539
            +     +G G FG     R     + +AVK + +  G  ++E +  E++    L+H N+
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNI 78

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERL---DWRKRFN-IIEGISRGLL 594
           VR     +      +I EY     L    ++ +    R    + R  F  ++ G+S    
Sbjct: 79  VRFKEVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVS---- 130

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMAKIF 633
           Y H    ++I HRDLK  N LLD    P  KI DFG +K  
Sbjct: 131 YCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 84.0 bits (208), Expect = 3e-17
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 15/169 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQH 536
           N F+    LG+G FG V   + K      A+K L K      +E    + E  V+   +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGL 593
             L  L     +  +++  + EY     L    F  L +ER+  + R RF   E +S  L
Sbjct: 208 PFLTALK-YSFQTHDRLCFVMEYANGGEL----FFHLSRERVFSEDRARFYGAEIVS-AL 261

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            YLH  S   +++RDLK  N++LD++ + KI+DFG+ K    +     T
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 82.5 bits (204), Expect = 5e-17
 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 12/173 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           ++F++   +G+G F  V   ++K   ++ A+K ++K        +  F  E  V+     
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           R + +L     + E  + L+ EY     L  LL    ++   +   RF + E +   +  
Sbjct: 121 RWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE-MARFYLAEIVM-AIDS 177

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           +HR   L  +HRD+K  NILLD   + +++DFG       +     +   VGT
Sbjct: 178 VHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGT 226

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 81.1 bits (201), Expect = 8e-17
 Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 29/172 (16%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEI-AVKRLSKASGQGLEEFMN--------EVMV 530
             ++  +++G+G +G V+  R LK+G    A+KR+       ++            EV V
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------VQTGEEGMPLSTIREVAV 64

Query: 531 ISKLQ---HRNLVRLLGCCVEGEEK-----MLIYEYMPNRSLDALLFDPLKKERLDWRKR 582
           +  L+   H N+VRL   C            L++E++ ++ L   L D + +  +     
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETI 122

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
            +++  + RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+ 
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 81.2 bits (201), Expect = 9e-17
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 29/177 (16%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            + FQ+    GQG FG V  G+ K  G  +A+K++ +       E    +  ++ L H N
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLHHPN 80

Query: 539 LVRLLGC-CVEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG--- 588
           +V+L       GE         ++ EY+P         D L +   ++ +R         
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVP---------DTLHRCCRNYYRRQVAPPPILI 131

Query: 589 ------ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP-KISDFGMAKIFGGNQD 638
                 + R +  LH  S + + HRD+K  N+L++E     K+ DFG AK    ++ 
Sbjct: 132 KVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 81.7 bits (202), Expect = 1e-16
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 16/175 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEE---FMNEVMVISKLQH 536
            +F++   +G+G FG V   +LK+  ++ A+K L+K       E   F  E  V+     
Sbjct: 74  EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGL 593
           + +  L     + +  + L+ +Y     L  LL    K E    +   RF + E +   +
Sbjct: 134 KWITTLH-YAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVI-AI 188

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             +H+   L  +HRD+K  NIL+D   + +++DFG       +     +   VGT
Sbjct: 189 DSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGT 239

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISKLQH 536
           N+F     LG+G FG V   R K      A+K L K      +E    + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 537 RNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRGL 593
             L  L     +  +++  + EY     L    F  L +ER+  + R RF   E I   L
Sbjct: 65  PFLTALK-YAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFYGAE-IVSAL 118

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            YLH      +++RD+K  N++LD++ + KI+DFG+ K    +     T
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 79.0 bits (195), Expect = 2e-16
 Identities = 15/154 (9%), Positives = 49/154 (31%), Gaps = 16/154 (10%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD---GQEIAVKRL---SKASGQGLEEFMNEVMVISKLQH 536
           ++L    G       +     D    +++A+  +          L+E ++  + +S++  
Sbjct: 33  YRLLIFHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             + R+L         +++ E++   SL  +                  ++ ++      
Sbjct: 91  PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA-----DTSPSPVGAIRAMQSLAAAADAA 145

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           HR     +       S + +  + +  ++     
Sbjct: 146 HRAG---VALSIDHPSRVRVSIDGDVVLAYPATM 176

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 78.4 bits (194), Expect = 5e-16
 Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR---LKDGQEI-AVKRLSKAS----GQGLEEFMNEVMVIS 532
             F+L   LG+GG+G V+  R     +  +I A+K L KA      +       E  ++ 
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76

Query: 533 KLQHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGI 589
           +++H  +V L+    +   K+ LI EY+    L    F  L++E +  +    F + E I
Sbjct: 77  EVKHPFIVDLI-YAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAE-I 130

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           S  L +LH+     II+RDLK  NI+L+ + + K++DFG+ K    +     T
Sbjct: 131 SMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 78.0 bits (193), Expect = 8e-16
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 18/171 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR---LKDGQEI-AVKRLSKAS--GQGLEEFMNEVMVISKL 534
           + F+L   LGQG FG V+  +     D +++ A+K L KA+   +       E  ++ ++
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83

Query: 535 QHRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISR 591
            H  +V+L     + E K+ LI +++    L    F  L KE +  +   +F + E ++ 
Sbjct: 84  NHPFIVKLH-YAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE-LAL 137

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            L +LH    L II+RDLK  NILLDEE + K++DFG++K    ++ +A +
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 78.1 bits (193), Expect = 1e-15
 Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 17/159 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISK-LQ 535
           ++F     +G+G FG V   R K  +   AVK L K +    +E    M+E  V+ K ++
Sbjct: 38  SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
           H  LV L     +  +K+  + +Y+    L    F  L++ER  L+ R RF   E I+  
Sbjct: 98  HPFLVGLH-FSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAE-IASA 151

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           L YLH    L I++RDLK  NILLD + +  ++DFG+ K
Sbjct: 152 LGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 77.7 bits (192), Expect = 1e-15
 Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 30/186 (16%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEE--FMN---------EV 528
            + + +   +  G +G V  G   +G  +A+KR+      G       +         E+
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 529 MVISKLQHRNLVRLLGC-CVEGEEKM----LIYEYMPNRSLDALLFDPLKKERL---DWR 580
            +++   H N++ L        E  M    L+ E M        L   +  +R+      
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-----RTDLAQVIHDQRIVISPQH 135

Query: 581 KRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQA 640
            ++  +  I  GL  LH      ++HRDL   NILL +  +  I DF +A+      D  
Sbjct: 136 IQY-FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR--EDTADAN 189

Query: 641 DTGRVV 646
            T  V 
Sbjct: 190 KTHYVT 195

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISK-LQ 535
           +NF+    LG+G FG V   R+K+  ++ AVK L K        +E  M E  ++S    
Sbjct: 23  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
           H  L +L  CC +  +++  + E++    L       ++K R   + R RF   E I   
Sbjct: 83  HPFLTQLF-CCFQTPDRLFFVMEFVNGGDL----MFHIQKSRRFDEARARFYAAE-IISA 136

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L++LH      II+RDLK  N+LLD E + K++DFGM K    N     T
Sbjct: 137 LMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT 183

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKASGQGLEEF---MNEVMVISK-LQ 535
            +F L   LG+G FG V+    K   +  A+K L K      ++    M E  V+S   +
Sbjct: 17  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
           H  L  +  C  + +E +  + EY+    L       ++        R  F   E I  G
Sbjct: 77  HPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAAE-IILG 130

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L +LH      I++RDLK  NILLD++ + KI+DFGM K       + +T
Sbjct: 131 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT 177

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 76.5 bits (189), Expect = 3e-15
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISK-LQ 535
            +F L   +G+G +  V   RLK    I A+K + K      + ++    E  V  +   
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
           H  LV L   C + E ++  + EY+    L       ++++R   +   RF   E IS  
Sbjct: 69  HPFLVGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAE-ISLA 122

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L YLH      II+RDLK  N+LLD E + K++D+GM K      D   T
Sbjct: 123 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 169

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 77.2 bits (190), Expect = 4e-15
 Identities = 34/180 (18%), Positives = 79/180 (43%), Gaps = 33/180 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
            + +++   +G G +G V       + + +A+K++ +        F +         E+ 
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-------FEDLIDCKRILREIA 104

Query: 530 VISKLQHRNLVRLLG-CCVEGEEKM----LIYEYMPNRSLDALL--FDPLKKERLDWRKR 582
           ++++L H ++V++L     +  EK     ++ E         L      L +       +
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELH----IK 159

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
             ++  +  G+ Y+H  S   I+HRDLK +N L++++ + K+ DFG+A+     ++    
Sbjct: 160 T-LLYNLLVGVKYVH--SA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 76.2 bits (188), Expect = 5e-15
 Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 32/173 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              +   + +G G +G V      + G+++A+K+LS+        F +         E++
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP-------FQSEIFAKRAYRELL 75

Query: 530 VISKLQHRNLVRLL------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
           ++  +QH N++ LL             +  L+  +M        L   +  +  + + ++
Sbjct: 76  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-----QTDLQKIMGLKFSEEKIQY 130

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
            ++  + +GL Y+H      ++HRDLK  N+ ++E+   KI DFG+A+     
Sbjct: 131 -LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 76.2 bits (188), Expect = 5e-15
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISK-LQ 535
            +F L   +G+G +  V   RLK    I A++ + K      + ++    E  V  +   
Sbjct: 52  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
           H  LV L   C + E ++  + EY+    L       ++++R   +   RF   E IS  
Sbjct: 112 HPFLVGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAE-ISLA 165

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L YLH      II+RDLK  N+LLD E + K++D+GM K      D   T
Sbjct: 166 LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 212

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 75.5 bits (186), Expect = 6e-15
 Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 31/174 (17%)

Query: 480 TNNFQLSSK-LGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H 536
           T+++QLS + LG G  G V     +  GQ+ A+K L  +      +   EV    +    
Sbjct: 27  TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGG 81

Query: 537 RNLVRLLGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDWRKRFN------II 586
            ++V +L              +I E M    L    F  +++      + F       I+
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEGGEL----FSRIQERG---DQAFTEREAAEIM 134

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQ 637
             I   + +LH      I HRD+K  N+L    +++   K++DFG AK    N 
Sbjct: 135 RDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 77.0 bits (189), Expect = 8e-15
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISK-LQ 535
            +F     LG+G FG V     K   E+ AVK L K        +E  M E  V++   +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKER--LDWRKRFNIIEGISRG 592
              L +L   C +  +++  + EY+    L       +++     +    F   E I+ G
Sbjct: 401 PPFLTQLH-SCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFKEPHAVFYAAE-IAIG 454

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L +L       II+RDLK  N++LD E + KI+DFGM K    +     T
Sbjct: 455 LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 501

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 75.5 bits (186), Expect = 9e-15
 Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 27/176 (15%)

Query: 485 LSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRL 542
            S  LG G  G V     K   ++ A+K L         +   EV +  +     ++VR+
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 120

Query: 543 LGCCVEGEEKM----LIYEYMPNRSLDALLFDPLKKERLDW---RKRFNIIEGISRGLLY 595
           +              ++ E +    L    F  ++         R+   I++ I   + Y
Sbjct: 121 VDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQY 176

Query: 596 LHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LH    + I HRD+K  N+L          K++DFG AK    +           T
Sbjct: 177 LHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT---PCYT 226

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 75.3 bits (186), Expect = 9e-15
 Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI-AVKRLSKA---SGQGLEEFMNEVMVISK-LQ 535
            +F     LG+G FG V     K   E+ AVK L K        +E  M E  V++   +
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79

Query: 536 HRNLVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEGISRG 592
              L +L   C +  +++  + EY+    L       +++     +    F   E I+ G
Sbjct: 80  PPFLTQLH-SCFQTMDRLYFVMEYVNGGDL----MYHIQQVGRFKEPHAVFYAAE-IAIG 133

Query: 593 LLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           L +L       II+RDLK  N++LD E + KI+DFGM K    +     T
Sbjct: 134 LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT 180

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 32/174 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              +Q    +G G  G V         + +A+K+LS+        F N         E++
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-------FQNQTHAKRAYRELV 76

Query: 530 VISKLQHRNLVRLL------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
           ++  + H+N++ LL          E ++  ++ E M     DA L   ++ E    R  +
Sbjct: 77  LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSY 131

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            ++  +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G + 
Sbjct: 132 -LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 35/185 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              +   S +G+G +G V       +   +A+K++S         F +         E+ 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIK 77

Query: 530 VISKLQHRNLVRLLGCCV-EGEEKM----LIYEYMPNRSLDALLFDPLKKERL-DWRKRF 583
           ++ + +H N++ +         E+M    ++ + M     +  L+  LK + L +    +
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICY 132

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD-- 641
             +  I RGL Y+H  S   ++HRDLK SN+LL+   + KI DFG+A++   + D     
Sbjct: 133 -FLYQILRGLKYIH--SA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 188

Query: 642 TGRVV 646
           T  V 
Sbjct: 189 TEYVA 193

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 74.5 bits (183), Expect = 3e-14
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 32/174 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              +Q    +G G  G V         + +A+K+LS+        F N         E++
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-------FQNQTHAKRAYRELV 113

Query: 530 VISKLQHRNLVRLL------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRF 583
           ++  + H+N++ LL          E ++  L+ E M     DA L   ++ E    R  +
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSY 168

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
            + + +  G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G + 
Sbjct: 169 LLYQ-MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 218

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 73.5 bits (181), Expect = 3e-14
 Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 19/172 (11%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HR 537
            +++QL  KLG+G +  V+    + + +++ VK L     +   +   E+ ++  L+   
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGP 91

Query: 538 NLVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           N++ L     +   +   L++E++ N     L +  L    +    RF + E I + L Y
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNTDFKQL-YQTLTDYDI----RFYMYE-ILKALDY 145

Query: 596 LHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGGNQDQADTGRVV 646
            H  S   I+HRD+K  N+++D E    ++ D+G+A+    +  Q    RV 
Sbjct: 146 CH--SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRVA 192

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 73.5 bits (181), Expect = 3e-14
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR---LKDGQEI-AVKRLSKAS----GQGLEEFMNEVMVIS 532
            NF+L   LG G +G V+  R     D  ++ A+K L KA+     +  E    E  V+ 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113

Query: 533 KLQHRN-LVRLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERL--DWRKRFNIIEG 588
            ++    LV L     + E K+ LI +Y+    L    F  L +     +   +  + E 
Sbjct: 114 HIRQSPFLVTLH-YAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGE- 167

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           I   L +LH+   L II+RD+K  NILLD   +  ++DFG++K
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 71.9 bits (177), Expect = 6e-14
 Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 24/159 (15%)

Query: 485 LSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRL 542
            S  LG G  G V     K   ++ A+K L         +   EV +  +  Q  ++VR+
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 76

Query: 543 LGCC---VEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDW---RKRFNIIEGISRGLLY 595
           +        G + + ++ E +        LF  ++         R+   I++ I   + Y
Sbjct: 77  VDVYENLYAGRKCLLIVMECLD----GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132

Query: 596 LHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAK 631
           LH    + I HRD+K  N+L          K++DFG AK
Sbjct: 133 LHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 72.4 bits (178), Expect = 8e-14
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 33/174 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              ++    +G G +G V      + G ++A+K+L +        F +         E+ 
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-------FQSELFAKRAYRELR 76

Query: 530 VISKLQHRNLVRLL------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKR 582
           ++  ++H N++ LL          +  +  L+  +M        L   +K E+L + R +
Sbjct: 77  LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-----GTDLGKLMKHEKLGEDRIQ 131

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
           F ++  + +GL Y+H      IIHRDLK  N+ ++E+   KI DFG+A+     
Sbjct: 132 F-LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 71.1 bits (175), Expect = 1e-13
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 46/195 (23%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
            + +     LG GG G V+        + +A+K++            +         E+ 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---------LTDPQSVKHALREIK 60

Query: 530 VISKLQHRNLVRLL--------------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE 575
           +I +L H N+V++               G   E     ++ EYM     +  L + L++ 
Sbjct: 61  IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQG 115

Query: 576 RL-DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF 633
            L +   R   +  + RGL Y+H  +   ++HRDLK +N+ ++ E+L  KI DFG+A+I 
Sbjct: 116 PLLEEHARL-FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171

Query: 634 GGNQDQAD--TGRVV 646
             +       +  +V
Sbjct: 172 DPHYSHKGHLSEGLV 186

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 33/189 (17%)

Query: 471 FQFEELATATNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN--- 526
           FQ  +     +N+ +   +G+G +G VY        + +A+K++++        F +   
Sbjct: 16  FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-------FEDLID 68

Query: 527 ------EVMVISKLQHRNLVRLLGCCV-EGEEKM----LIYEYMPNRSLDALL--FDPLK 573
                 E+ ++++L+   ++RL    + +   K     ++ E      L  L      L 
Sbjct: 69  CKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLT 127

Query: 574 KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF 633
           +E      +  I+  +  G  ++H      IIHRDLK +N LL+++ + K+ DFG+A+  
Sbjct: 128 EEH----IKT-ILYNLLLGENFIH--ES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179

Query: 634 GGNQDQADT 642
              +D    
Sbjct: 180 NSEKDTNIV 188

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 49/202 (24%)

Query: 478 TATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMN-EVMVISKLQ 535
           T++  + L   LG G FG V      + G+  A+K++ +        + N E+ ++  L 
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLD 58

Query: 536 HRNLVRLLGC----CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN------- 584
           H N+++L+        E  +     +            +   K  +    +         
Sbjct: 59  HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118

Query: 585 --------IIEGIS-------------------RGLLYLHRDSRLRIIHRDLKASNILLD 617
                   +++                      R + ++H    L I HRD+K  N+L++
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVN 175

Query: 618 EELNP-KISDFGMAKIFGGNQD 638
            + N  K+ DFG AK    ++ 
Sbjct: 176 SKDNTLKLCDFGSAKKLIPSEP 197

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 70.4 bits (173), Expect = 3e-13
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 33/168 (19%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              +Q  S +G G +G V      K G  +AVK+LS+        F +         E+ 
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-------FQSIIHAKRTYRELR 80

Query: 530 VISKLQHRNLVRLL------GCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKR 582
           ++  ++H N++ LL          E  +  L+   M      A L + +K ++L D   +
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDDHVQ 135

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA 630
           F +I  I RGL Y+H      IIHRDLK SN+ ++E+   KI DFG+A
Sbjct: 136 F-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 179

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 33/179 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
           +++FQL S LG+G +G V        G+ +A+K++          F           E+ 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIK 61

Query: 530 VISKLQHRNLVRLLGC-CVEGEEKM----LIYEYMPNRSLDALLFDPLKKERL-DWRKRF 583
           ++   +H N++ +      +  E      +I E M        L   +  + L D   ++
Sbjct: 62  ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-----QTDLHRVISTQMLSDDHIQY 116

Query: 584 NIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
             I    R +  LH  +   +IHRDLK SN+L++   + K+ DFG+A+I   +      
Sbjct: 117 -FIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 30/179 (16%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMN---------EVM 529
              ++L  KLG+G +G V+     + G+ +AVK++  A       F N         E+M
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-------FQNSTDAQRTFREIM 60

Query: 530 VISKLQ-HRNLVRLLGCCV--EGEEKMLIYEYMPNRSLDALLFDPLKKERL-DWRKRFNI 585
           ++++L  H N+V LL         +  L+++YM     +  L   ++   L    K++ +
Sbjct: 61  ILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQY-V 114

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR 644
           +  + + + YLH  S   ++HRD+K SNILL+ E + K++DFG+++ F   +   +   
Sbjct: 115 VYQLIKVIKYLH--SG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 68.4 bits (167), Expect = 1e-12
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 19/168 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRL-SKASGQGLEEFMNEVMVISK 533
           +  +L   LG+G FG V              + +AVK L   A+       M+E+ ++  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 534 L-QHRNLVRLLGCC-VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           +  H N+V LLG C   G   M+I E+    +L   L            KR   +   ++
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----------RSKRNEFVPYKTK 131

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
           G  +      +  I  DLK     +    +   S F   K     +++
Sbjct: 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.0 bits (127), Expect = 1e-07
 Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK 631
           +++G+ +L   +  + IHRDL A NILL E+   KI DFG+A+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 66.4 bits (161), Expect = 6e-12
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 46/199 (23%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRL--------SKASGQGLEEFMNEVMV 530
            T   Q   K+G+G FG V+         +A+K +        + +  +  EE + E+++
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 531 ISKLQ---------HRNLVRLLGC-CVEG---EEKMLIYEYM----------PNRSLDAL 567
             +L              + L    CV+G      +  +++           P+   D  
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 568 LF------------DPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL 615
           LF            + ++ +        +I+  ++  L        LR  HRDL   N+L
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVL 194

Query: 616 LDEELNPKISDFGMAKIFG 634
           L +    K+      K   
Sbjct: 195 LKKTSLKKLHYTLNGKSST 213

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 24  SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLK 83
           +S++S   +      L  G +++L      +       + YD       +W +N      
Sbjct: 2   NSLSSPNSLF-TGHSLEVGPSYRLIMQGDCNF------VLYD---SGKPVWASNTGG--L 49

Query: 84  DSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWE 143
            S   +T+  +GNLV+ +    V+W +  +    +     L    N+V+       +VW 
Sbjct: 50  GSGCRLTLHNNGNLVIYDQSNRVIWQTKTNG-KEDHYVLVLQQDRNVVIYGP----VVWA 104

Query: 144 S 144
           +
Sbjct: 105 T 105

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 29/166 (17%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQHRN 538
           N F+L  K+G G FG +Y G  ++  +E+A+K  + K     L     E  +   LQ   
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLL---YESKIYRILQGGT 63

Query: 539 LV-RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI-------IEGIS 590
            +  +    VEG+  +L+ + +   SL+  LF+          ++ ++        + I+
Sbjct: 64  GIPNVRWFGVEGDYNVLVMDLL-GPSLED-LFNFCS-------RKLSLKTVLMLADQMIN 114

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPK---ISDFGMAKIF 633
           R + ++H  S    +HRD+K  N L+          I DFG+AK +
Sbjct: 115 R-VEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 31/168 (18%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQH-R 537
            NF++  K+G G FG +  G+ L   + +A+K    K+    L     E     +L    
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQL---HLEYRFYKQLGSGD 65

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI-------IEGIS 590
            + ++      G+   ++ E +   SL+  LFD          + F++       I+ IS
Sbjct: 66  GIPQVYYFGPCGKYNAMVLELL-GPSLED-LFDLCD-------RTFSLKTVLMIAIQLIS 116

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPK-----ISDFGMAKIF 633
           R + Y+H  +   +I+RD+K  N L+    N       I DF +AK +
Sbjct: 117 R-MEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 29/166 (17%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQH-R 537
           N ++L  K+G G FG +Y G  +  G+E+A+K    K     L     E  +   +Q   
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH---IESKIYKMMQGGV 65

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI-------IEGIS 590
            +  +  C  EG+  +++ E +   SL+  LF+          ++F++        + IS
Sbjct: 66  GIPTIRWCGAEGDYNVMVMELL-GPSLED-LFNFCS-------RKFSLKTVLLLADQMIS 116

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPK---ISDFGMAKIF 633
           R + Y+H  +    IHRD+K  N L+          I DFG+AK +
Sbjct: 117 R-IEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 4e-10
 Identities = 71/520 (13%), Positives = 148/520 (28%), Gaps = 132/520 (25%)

Query: 191 QNIPEIFVWNVSRP-Y-WRSGPWNGQIFIGIPELKSV-YLFRHNFTFGFANDWTFFA--- 244
           + + + FV  V R  Y +   P   +     P + +  Y+ + +  +   ND   FA   
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQ--RQPSMMTRMYIEQRDRLY---NDNQVFAKYN 130

Query: 245 LT-AQGILEERIWIKWKDNWEVGFLNLRTECDV--YGKCGAFGICNSQEKPICSCL---- 297
           ++  Q  L+ R  +          L LR   +V   G  G  G      K   + +    
Sbjct: 131 VSRLQPYLKLRQAL----------LELRPAKNVLIDGVLG-SG------K---TWVALDV 170

Query: 298 ---EGFEPKNAEEWNRGNW-TSGCIRRSKLQCER-RNITGKVGKEDGFSKLNKMKVPDFT 352
                 + K      +  W         +   E  + +  ++         +   +    
Sbjct: 171 CLSYKVQCKMD---FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 353 EWTSPATEDECREQCLKNC---------SCIAYAFDGGIGC---MVWRSINLIDI----- 395
                      + +  +NC         +    AF+  + C   +  R   + D      
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN--LSCKILLTTRFKQVTDFLSAAT 285

Query: 396 --------QRLPFG---GTDLYIRVANSDVDEKGKKDVFVSPLIKGMFALAICTLFLWRW 444
                     +         L ++  +    +  ++ +  +P    + A       L  W
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA-ESIRDGLATW 344

Query: 445 IAKRKEVIAKLSATNVNTVKLQDLPLFQ--FEELATATNNFQLSSKLGQGGFGP-----V 497
              +     KL+    +++ + +   ++  F+ L+     F  S+ +      P     +
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV----FPPSAHI------PTILLSL 394

Query: 498 YWGRLK--DGQEIAVK--RLSKASGQGLEE--FMNEVMVISKLQHRNLVRLLGCCVEGEE 551
            W  +   D   +  K  + S    Q  E    +  + +  K++  N   L         
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL--------H 446

Query: 552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKA 611
           + ++  Y   ++ D    D L    LD                Y H      I H     
Sbjct: 447 RSIVDHYNIPKTFD---SDDLIPPYLD-------------QYFYSH------IGHHLKNI 484

Query: 612 SNILLDEELNPKISDFGM--AKIFGGNQDQADTGRVVGTL 649
            +            DF     KI   +     +G ++ TL
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL 524

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 31/168 (18%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLS-KASGQGLEEFMNEVMVISKLQH-R 537
            ++++  ++G+G FG ++ G  L + Q++A+K    ++    L    +E      L    
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR---DEYRTYKLLAGCT 66

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI-------IEGIS 590
            +  +     EG   +L+ + +   SL+  L D          ++F++        + ++
Sbjct: 67  GIPNVYYFGQEGLHNVLVIDLLG-PSLED-LLDLCG-------RKFSVKTVAMAAKQMLA 117

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPK-----ISDFGMAKIF 633
           R +  +H  S   +++RD+K  N L+    +       + DFGM K +
Sbjct: 118 R-VQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 55.3 bits (133), Expect = 1e-09
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 23  DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMG-----IWYDMPSEKAVIWVAN 77
           ++ I S Q   +   IL    +  L            M      + YD       IW  N
Sbjct: 1   NNIIFSKQPDDNHPQILHATES--LEILFGTHVYRFIMQTDCNLVLYD---NNNPIWATN 55

Query: 78  RDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNIN 137
                  +     +  DG LV++  +   +W S V+          L    N+V+  +  
Sbjct: 56  TGG--LGNGCRAVLQPDGVLVVITNENVTVWQSPVAG-KAGHYVLVLQPDRNVVIYGD-- 110

Query: 138 RAIVWES 144
              +W +
Sbjct: 111 --ALWAT 115

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 43/183 (23%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR---------LKDGQEIAVKRLSKASGQGLEEFMNEVMVI 531
             ++L S   +   G +Y                Q+ ++K L    G+   E        
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAA 100

Query: 532 SKLQHRNLVRLLGC------------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW 579
             LQ     +L                 + + + L+   +  RSL + L        +  
Sbjct: 101 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSAL-------DVSP 152

Query: 580 RKRFNI-------IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI--SDFGMA 630
           +   +           +   L +LH +     +H ++ A NI +D E   ++  + +G A
Sbjct: 153 KHVLSERSVLQVACRLLDA-LEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFA 208

Query: 631 KIF 633
             +
Sbjct: 209 FRY 211

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 22  IDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNP 81
           +D+ + S Q +   D  L  G  + L   N  +       + Y        IW +N D  
Sbjct: 1   MDNVLLSGQTLH-ADHSLQAG-AYTLTIQNKCNL------VKYQ---NGRQIWASNTDR- 48

Query: 82  LKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIV 141
            + S   +T+  DGNLV+ +     +W S      N   +  L   G  V+       ++
Sbjct: 49  -RGSGCRLTLLSDGNLVIYDHNNNDVWGSACWG-DNGKYALVLQKDGRFVIYGP----VL 102

Query: 142 WES 144
           W  
Sbjct: 103 WSL 105

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 77  NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNI 136
           + D+ L+  +  +TI    NLV     +  +W+SN     +      LL  GNLV+ D+ 
Sbjct: 12  HADHSLQAGAYTLTIQNKCNLVKYQNGR-QIWASNTDRRGSGCR-LTLLSDGNLVIYDHN 69

Query: 137 NRAIVWESFQEPTDSF 152
           N  +   +       +
Sbjct: 70  NNDVWGSACWGDNGKY 85

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 39/176 (22%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ------ 535
           + L  KLG G F  V+  + + +   +A+K + +      E   +E+ ++ ++       
Sbjct: 21  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTK 79

Query: 536 -----HRNLVRLLGC-CVEGEEKM---LIYEYMPNRSLDALLFDPLKKERLDWRKRFNI- 585
                  ++++LL     +G   +   +++E      L   L   +KK      +   + 
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFE-----VLGENLLALIKKYEH---RGIPLI 131

Query: 586 -IEGISR----GLLYLHRDSRLRIIHRDLKASNILLDEELNP------KISDFGMA 630
            ++ IS+    GL Y+HR  R  IIH D+K  N+L++   +P      KI+D G A
Sbjct: 132 YVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 57.4 bits (139), Expect = 6e-09
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 42/181 (23%)

Query: 481 NNFQLSSKLGQGGFGPVYWG-RLKDGQEIA---VKRLSKASGQGLEEF-----MNEVMVI 531
           N + L  K+G GGFG +Y        ++ A   VK   + +G    E      + +   I
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96

Query: 532 SKLQHRNLVRLLG----------CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRK 581
            K   R  +  LG                 + ++ E +    L  +              
Sbjct: 97  KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKI---------SGQNG 146

Query: 582 RFNI-------IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI--SDFGMAKI 632
            F         I  +   L Y+H +     +H D+KA+N+LL  +   ++  +D+G++  
Sbjct: 147 TFKKSTVLQLGIRMLDV-LEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202

Query: 633 F 633
           +
Sbjct: 203 Y 203

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 57.1 bits (138), Expect = 7e-09
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 43/183 (23%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEI------AVKRLSKASGQ-----------GLEE 523
             +++   +GQGGFG +Y   +   + +       VK     +G               E
Sbjct: 35  AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPE 94

Query: 524 FMNEVMVISKLQHRNLVRLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDW 579
            + + +   KL++  + +  G  +  +       +I +      L  + ++   K     
Sbjct: 95  QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKI-YEANAK----- 147

Query: 580 RKRFNI-------IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI--SDFGMA 630
             RF+        +  +   L Y+H       +H D+KASN+LL+ +   ++   D+G+A
Sbjct: 148 --RFSRKTVLQLSLRILDI-LEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLA 201

Query: 631 KIF 633
             +
Sbjct: 202 YRY 204

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 72  VIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLV 131
            +W +N     K       +  DGN V+ + +   LW+S+     N +    L + GN+V
Sbjct: 39  SVWASNTGILGKKGC-KAVLQSDGNFVVYDAEGRSLWASHSVR-GNGNYVLVLQEDGNVV 96

Query: 132 LRDNINRAIVWESF 145
           +  +     +W + 
Sbjct: 97  IYGS----DIWSTG 106

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 77  NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNI 136
                L        + ED NLVL +     +W+SN   L      A L   GN V+ D  
Sbjct: 11  YAGQSLDVEPYHFIMQEDCNLVLYDHST-SVWASNTGILGKKGCKAVLQSDGNFVVYDAE 69

Query: 137 NRAIVWES 144
            R+ +W S
Sbjct: 70  GRS-LWAS 76

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 23  DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPL 82
           D+ + S + +  P   L+NG  +        +       + YD       IW  N     
Sbjct: 1   DNILYSGETLS-PGEFLNNG-RYVFIMQEDCNL------VLYD---VDKPIWATNTGG-- 47

Query: 83  KDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVW 142
            D    +++  DGNLV+ + +   +W+SN     N +    L    N+V+         W
Sbjct: 48  LDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG-ENGNYVCVLQKDRNVVIYGT----ARW 102

Query: 143 ES 144
            +
Sbjct: 103 AT 104

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 54.3 bits (131), Expect = 6e-08
 Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 51/179 (28%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK------RLSKASGQGLEEFMNEVMVIS 532
            + +++ S +G+G FG V       + + +A+K           +         EV ++ 
Sbjct: 53  MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA-------QIEVRLLE 105

Query: 533 KLQHR------NLVRLLGC-------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDW 579
            +          +V L          C       L++E      L   L+D L+      
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLC-------LVFE-----MLSYNLYDLLRNTN--- 150

Query: 580 RKRFNI--IEGISR----GLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMA 630
            +  ++      ++     LL+L     L IIH DLK  NILL        KI DFG +
Sbjct: 151 FRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 34/188 (18%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ--- 535
              + +  KLG G F  V+    ++  + +A+K + K++    E  ++E+ ++  ++   
Sbjct: 36  NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK-VVKSAEHYTETALDEIRLLKSVRNSD 94

Query: 536 -----HRNLVRLLGC-CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFN----- 584
                   +V+LL    + G           N +   ++F+ L    L W  + N     
Sbjct: 95  PNDPNREMVVQLLDDFKISG----------VNGTHICMVFEVLGHHLLKWIIKSNYQGLP 144

Query: 585 ------IIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                 II+ + +GL YLH  ++ RIIH D+K  NILL             A  +  +  
Sbjct: 145 LPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202

Query: 639 QADTGRVV 646
              +G  V
Sbjct: 203 PPPSGSAV 210

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 16/119 (13%)

Query: 26  ITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDS 85
           + S   +      L+ G  +     N  +       + YD       +W +  +   K S
Sbjct: 4   LNSGHQLD-TGGSLAEG-GYLFIIQNDCNL------VLYD---NNRAVWASGTNG--KAS 50

Query: 86  SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES 144
             ++ +  DGNLV+ +G +  +W+SN +   N +    L    N+V+ DN N AI W +
Sbjct: 51  GCVLKMQNDGNLVIYSGSR-AIWASNTNR-QNGNYYLILQRDRNVVIYDNSNNAI-WAT 106

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 51.7 bits (124), Expect = 5e-07
 Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 55/177 (31%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVK------RLSKASGQGLEEFMNEVMVISKLQ 535
           +++   +G+G FG V      K  Q +A+K      R  + +         E+ ++  L+
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA-------AEEIRILEHLR 151

Query: 536 HR------NLVRLLGC-------CVEGEEKMLIYEYM-PNRSLDALLFDPLKKERLDWRK 581
            +      N++ +L         C       + +E +  N      L++ +KK +    +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHIC-------MTFELLSMN------LYELIKKNKF---Q 195

Query: 582 RFNI--IEGISR----GLLYLHRDSRLRIIHRDLKASNILLDEELNP--KISDFGMA 630
            F++  +   +      L  LH+    RIIH DLK  NILL ++     K+ DFG +
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 74  WVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLR 133
           W +N  N        +T+++ G LV+ NG    +W S   + V  + +A +   G LV+ 
Sbjct: 40  WQSNTAN--NGRDCKLTLTDYGELVIKNGDGSTVWKSGAQS-VKGNYAAVVHPDGRLVVF 96

Query: 134 DNINRAIVWESFQEPTDSFLPG 155
                  V+       D ++ G
Sbjct: 97  GP----SVF-----KIDPWVRG 109

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 77  NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNI 136
           + +  LK+    + + +D NLVL NG     W SN +N         L D G LV+++  
Sbjct: 13  DTEGHLKNGDFDLVMQDDCNLVLYNGN----WQSNTANN-GRDCKLTLTDYGELVIKNGD 67

Query: 137 NRAIVWES 144
               VW+S
Sbjct: 68  GST-VWKS 74

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 71/197 (36%)

Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVK------RLSKASGQGLEEFMNEVMVI 531
              +++   LG+G FG V       +   ++A+K      +  +A+         E+ V+
Sbjct: 18  QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-------RLEINVL 70

Query: 532 SKLQHR------NLVRLLGC-------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD 578
            K++ +        V +          C       + +E      L    F+ LK+    
Sbjct: 71  KKIKEKDKENKFLCVLMSDWFNFHGHMC-------IAFE-----LLGKNTFEFLKENN-- 116

Query: 579 WRKRFNI--IEGISRGLL----YLHRDSRLRIIHRDLKASNILLDEELNP---------- 622
             + + +  +  ++  L     +LH     ++ H DLK  NIL                 
Sbjct: 117 -FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCE 172

Query: 623 ---------KISDFGMA 630
                    +++DFG A
Sbjct: 173 EKSVKNTSIRVADFGSA 189

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 77  NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNI 136
             D  L   +  + +  D NLVL     +  W SN      +    +L   G L+++D+ 
Sbjct: 16  YGDGRLTAKNHQLVMQGDCNLVLYG--GKYGWQSNTHGNGEHCF-LRLNHKGELIIKDDD 72

Query: 137 NRAIVWES 144
            + I W S
Sbjct: 73  FKTI-WSS 79

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 15/110 (13%)

Query: 23  DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPL 82
           ++ + S Q++     + +   N +L      +       + Y         W +N     
Sbjct: 6   NNLLFSGQVLYGDGRLTA--KNHQLVMQGDCNL------VLYGG----KYGWQSNTHG-- 51

Query: 83  KDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVL 132
                 + ++  G L++ +   + +WSS  S+         L D G  V+
Sbjct: 52  NGEHCFLRLNHKGELIIKDDDFKTIWSSR-SSSKQGEYVLILQDDGFGVI 100

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 46.8 bits (110), Expect = 6e-06
 Identities = 18/142 (12%), Positives = 40/142 (28%), Gaps = 8/142 (5%)

Query: 71  AVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNL 130
             +W +N       +     +  DG LV++  Q  + WSS        +    L     +
Sbjct: 45  VRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSSGTKG-SIGNYVLVLQPDRTV 100

Query: 131 VLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIH 190
                I    +W+S      S +   +      + +          +  S       L  
Sbjct: 101 T----IYGPGLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSM 156

Query: 191 QNIPEIFVWNVSRPYWRSGPWN 212
           +    + +++     W +    
Sbjct: 157 ETDCNLVLFDRDDRVWSTNTAG 178

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 46.1 bits (108), Expect = 1e-05
 Identities = 30/153 (19%), Positives = 47/153 (30%), Gaps = 10/153 (6%)

Query: 62  IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTS 121
           I + +  E +     +    L+ SS   T+  D NLVL +     +W+SN +        
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDV-RVWASNTAG--ATGCR 59

Query: 122 AQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPST 181
           A L   G LV+       I W S          G +  + Q             L D  T
Sbjct: 60  AVLQSDGLLVILTA-QNTIRWSS----GTKGSIGNYVLVLQPDRTVT--IYGPGLWDSGT 112

Query: 182 GSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQ 214
            +  + ++  N   I                 Q
Sbjct: 113 SNKGSVVVANNGNSILYSTQGNDNHPQTLHATQ 145

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 43.0 bits (100), Expect = 1e-04
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 7/75 (9%)

Query: 70  KAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGN 129
              +W  N          ++    +G + ++  Q   +W+S  S          L    N
Sbjct: 168 DDRVWSTNTAGKGTGCRAVLQ--PNGRMDVLTNQNIAVWTSGNSRSAGRYV-FVLQPDRN 224

Query: 130 LVLRDNINRAIVWES 144
           L +        +W +
Sbjct: 225 LAIYGG----ALWTT 235

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 47.3 bits (113), Expect = 9e-06
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 50/190 (26%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVK------RLSKASGQGLEEFMNEVMVIS 532
            N F +  K+G G FG V   + + + +  AVK      + ++++         E  ++ 
Sbjct: 34  NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA-------KIEADILK 86

Query: 533 KLQHR-----NLVRLLGC-------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWR 580
           K+Q+      N+V+  G        C       LI+E      L   L++ + +      
Sbjct: 87  KIQNDDINNNNIVKYHGKFMYYDHMC-------LIFE-----PLGPSLYEIITRNN---Y 131

Query: 581 KRFNI--IEGISRGLL----YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG 634
             F+I  I+     +L    YL +   + + H DLK  NILLD+    K          G
Sbjct: 132 NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188

Query: 635 GNQDQADTGR 644
                  T  
Sbjct: 189 KKIQIYRTKS 198

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 52/166 (31%)

Query: 480 TNNFQLSSKLGQGGFGPVY--WGRLKDGQEIAVK------RLSKASGQGLEEFMNEVMVI 531
           +  +++   LG+G FG V         G+ +AVK      R  +A+        +E+ V+
Sbjct: 13  SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAA-------RSEIQVL 65

Query: 532 SKLQHR------NLVRLLGC-------CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLD 578
             L           V++L         C       +++E      L    +D +K+    
Sbjct: 66  EHLNTTDPNSTFRCVQMLEWFEHHGHIC-------IVFE-----LLGLSTYDFIKENG-- 111

Query: 579 WRKRFNI--IEGISRGLL----YLHRDSRLRIIHRDLKASNILLDE 618
               F +  I  ++  +     +LH     ++ H DLK  NIL  +
Sbjct: 112 -FLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQ 153

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 5/123 (4%)

Query: 24  SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAV--IWVANRDNP 81
           S+ TS+        +L +  N  L       +    + +         +       +   
Sbjct: 101 STFTSNDQWNRTHLVLQDDGNIVLVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVV 160

Query: 82  LKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIV 141
               +  +    DGNLV         W++        +  A     GNLV+    N  + 
Sbjct: 161 YGAGASKLVFQGDGNLVAYGPNGAATWNAGTQG--KGAVRAVFQGDGNLVVYGAGNAVL- 217

Query: 142 WES 144
           W S
Sbjct: 218 WHS 220

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 29/144 (20%), Positives = 46/144 (31%), Gaps = 17/144 (11%)

Query: 35  PDAILSNGSNFKLGFFNPADSPYRYMGIWYDM---PSEKAVIWVANRDNPLKDSSGIITI 91
              +L+ GS    G    A +         ++       A  W A         +     
Sbjct: 145 DSLLLAPGSELVQGVVYGAGASKLVFQGDGNLVAYGPNGAATWNAGTQGK---GAVRAVF 201

Query: 92  SEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDS 151
             DGNLV+      VLW S+     + S   +L  +G++ + D      VW  F      
Sbjct: 202 QGDGNLVVYGAGNAVLWHSHTGG--HASAVLRLQANGSIAILDE---KPVWARF-----G 251

Query: 152 FLPGMHHG-IDQRTGKKVQLTSWK 174
           F P   H        K + + +W 
Sbjct: 252 FQPTYRHIRKINPDQKPIDIWTWH 275

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 18/202 (8%)

Query: 15  CLDFAVAIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSP--YRYMGIWYDMPSEKAV 72
            + F     S + + Q +     +LS    FKL      +         +W     +   
Sbjct: 6   RIPFNGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDGNLVIQDNGATVWVANEQQPFS 65

Query: 73  IWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVL 132
             +  R+         +         L +  +  +W ++ S   +N       +  +LVL
Sbjct: 66  STIPLRNKK-----APLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQW----NRTHLVL 116

Query: 133 RDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSL-SDPSTGSFSAGLIHQ 191
           +D+ N  +V           +P +   ID        L     L      G+ ++ L+ Q
Sbjct: 117 QDDGNIVLVDSLALWNGTPAIPLVPGAIDSL-----LLAPGSELVQGVVYGAGASKLVFQ 171

Query: 192 NIPEIFVWNVS-RPYWRSGPWN 212
               +  +  +    W +G   
Sbjct: 172 GDGNLVAYGPNGAATWNAGTQG 193

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 77  NRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNI 136
           + DN L   S    +  D NLVL N      + SN         + +L + G L +    
Sbjct: 12  HTDNQLSYESAAFVMQGDCNLVLYNEA--GGFQSNTHGR-GVDCTLRLNNRGQLEIHSAN 68

Query: 137 NRAIVWES 144
           +   VW  
Sbjct: 69  SNTPVWVY 76

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 68  SEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDS 127
           S+  ++W +      +     + +   G L + + +   ++ SN            L  +
Sbjct: 42  SKTNIVWESGTSG--RGQHCFMRLGHSGELDITDDRLNTVFVSNTVG-QEGDYVLILQIN 98

Query: 128 GNLVLRDNINRAIVWES 144
           G  V+        VW +
Sbjct: 99  GQAVVYGP----AVWST 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	649
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.98
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.98
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.94
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.94
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.93
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.93
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.93
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.93
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.93
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.93
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.93
3niz_A	311	Rhodanese family protein; structural genomics, str	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.93
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.93
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.92
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.92
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.92
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.92
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.92
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.92
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.92
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.92
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.92
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.92
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.92
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.92
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.92
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.92
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.92
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.92
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.92
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.92
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.91
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.91
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.91
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.91
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.91
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.91
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.91
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.91
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.91
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.91
3bhy_A	283	Death-associated protein kinase 3; death associate	99.91
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.91
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.91
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.91
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.91
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.91
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.91
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.91
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.91
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.91
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.91
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.91
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.91
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.91
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.91
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.91
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.91
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.91
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.91
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.91
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.9
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.9
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.9
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.9
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.9
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.9
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.9
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.9
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.9
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.9
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.9
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.9
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.9
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.9
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.89
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.89
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.89
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.89
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.89
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.89
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.89
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.89
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.88
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.88
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.88
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.88
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.88
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.88
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.88
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.88
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.88
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.87
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.87
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.87
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.87
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.87
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.87
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.87
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.86
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.85
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.85
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.85
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.83
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.82
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.81
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.79
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.77
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.69
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.69
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.67
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.66
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.65
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.64
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.61
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.6
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.54
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.38
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.37
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.34
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.25
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.19
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.18
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.15
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.13
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.04
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.04
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.9
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.65
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.65
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.56
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.45
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.45
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.34
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.33
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.0
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.99
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.86
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.76
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.6
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.5
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.21
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.14
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.12
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.1
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.08
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.03
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.69
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.65
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.05
3mes_A	424	Choline kinase; malaria, structural genomics, stru	94.01
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	92.18
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.22
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	81.61

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=1.2e-43  Score=361.39  Aligned_cols=215  Identities=17%  Similarity=0.212  Sum_probs=167.8

Q ss_pred             cccccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCC----cceEEEeeCCc
Q 006347           21 AIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDS----SGIITISEDGN   96 (649)
Q Consensus        21 ~~~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~----~~~l~~~~~G~   96 (649)
                      ++.|+|.+|++|++|++|+|++|.|+||||+++   ++|+   |+  +.+ |||+||||+|+.++    +++|+|+.||+
T Consensus        12 ~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~   82 (276)
T 3m7h_A           12 VGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQ   82 (276)
T ss_dssp             TTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEES
T ss_pred             ccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCCc
Confidence            348999999999999999999999999999543   4676   76  667 99999999999875    78999999999


Q ss_pred             EEE--EcCCceEEEEecCcccc----cccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCceeEE
Q 006347           97 LVL--VNGQKEVLWSSNVSNLV----NNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKKVQL  170 (649)
Q Consensus        97 L~l--~~~~~~~~Wss~~~~~~----~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~~~~L  170 (649)
                      |+|  .|++|++||+++++...    ..+++|+|+|+|||||+|   +.+||||  ||||||||||+++.+..+|.  .|
T Consensus        83 Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g~--~L  155 (276)
T 3m7h_A           83 YGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPGS--EL  155 (276)
T ss_dssp             SSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSSE--EE
T ss_pred             EEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC---CceeeCc--ccccccccccccccccccCc--cc
Confidence            999  78889999999986311    345789999999999997   5789999  99999999999998888774  47


Q ss_pred             EEcccCCCCCCceeEEeeeCCCccEEEEEc-CCeeeeecCCCCCccccccccceee-eEEee----eEEe-ccCCeEEEE
Q 006347          171 TSWKSLSDPSTGSFSAGLIHQNIPEIFVWN-VSRPYWRSGPWNGQIFIGIPELKSV-YLFRH----NFTF-GFANDWTFF  243 (649)
Q Consensus       171 ~S~~s~~dps~G~f~l~~~~~~~~~~~~~~-~~~~yw~sg~~~~~~~~~~~~~~~~-~~~~~----~~~~-~~~~~~~~~  243 (649)
                         ++.+||++|.|+++++++|.  +++++ +..+||++|+|++.......+.... ..+..    .... ......+|+
T Consensus       156 ---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~l~~dGnLvl~d~~~~~vWsS~t~~~~~~rl  230 (276)
T 3m7h_A          156 ---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVL  230 (276)
T ss_dssp             ---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEEECTTSCEEEECTTSCEEEECSCTTCTTCEE
T ss_pred             ---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEEEcCCCeEEEEeCCCcEEEEecCCCCCCEEE
Confidence               56889999999999999985  44555 4689999999975432111110111 11100    0011 112234799


Q ss_pred             EEccCCcEEEEEE
Q 006347          244 ALTAQGILEERIW  256 (649)
Q Consensus       244 ~l~~~G~l~~~~~  256 (649)
                      +|+.||+|++|.|
T Consensus       231 ~Ld~dGnLvly~~  243 (276)
T 3m7h_A          231 RLQANGSIAILDE  243 (276)
T ss_dssp             EECTTSCEEEEEE
T ss_pred             EEcCCccEEEEcC
Confidence            9999999999998

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=2.3e-36  Score=302.50  Aligned_cols=208  Identities=13%  Similarity=0.173  Sum_probs=157.8

Q ss_pred             cccccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEE
Q 006347           21 AIDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLV  100 (649)
Q Consensus        21 ~~~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~  100 (649)
                      ++.|+|.+|++|.+|++|  ++|.|+|||+.+++.      ++|..   +++||+|||+.|   .+++|+|+.||||||+
T Consensus         6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gnl------~ly~~---~~~vW~an~~~~---~~~~l~l~~dGnLvl~   71 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCNL------VLFDS---DVRVWASNTAGA---TGCRAVLQSDGLLVIL   71 (236)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSCE------EEEES---SSEEECCCCCSC---SCCBCCBCSSSCBCCB
T ss_pred             eccceeCCCCEECCCCEE--EcCCEEEEECCCCcE------EEEEC---CEEEEECCCCCC---CCeEEEEcCCCcEEEE
Confidence            347899999999999999  599999999976641      34543   799999999988   4578999999999999


Q ss_pred             cCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccc-cCCCcccccc-cCCc-----eeEEEEc
Q 006347          101 NGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSF-LPGMHHGIDQ-RTGK-----KVQLTSW  173 (649)
Q Consensus       101 ~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTl-Lpg~~l~~~~-~~g~-----~~~L~S~  173 (649)
                      |++|++||+|++.. ......|+|+|+|||||++.    ++||||||||||+ ||||  +.+. .+|+     +++|+  
T Consensus        72 d~~~~~vW~s~~~~-~~~~~~~~l~d~Gnlvl~~~----~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~--  142 (236)
T 1dlp_A           72 TAQNTIRWSSGTKG-SIGNYVLVLQPDRTVTIYGP----GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH--  142 (236)
T ss_dssp             CTTTCCSCCCCCCC-CSSCCEEEECSSSCEEEECS----EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC--
T ss_pred             cCCCcEEEeCCccc-cCCcEEEEEeCCCCEEEecC----CEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE--
Confidence            99999999998862 23346899999999999952    7999999998776 5554  3333 3333     46887  


Q ss_pred             ccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCCCCccccccccceeee-EEeeeE------Ee-cc-CCeEEEEE
Q 006347          174 KSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQIFIGIPELKSVY-LFRHNF------TF-GF-ANDWTFFA  244 (649)
Q Consensus       174 ~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~~~~~~~~~~~~~~~~-~~~~~~------~~-~~-~~~~~~~~  244 (649)
                       +..||++|.|+|+++++|  +++++++..+||++++|++. +...+.+.... .+.+..      .. .. ....+|++
T Consensus       143 -s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~Gnl~ly~~~~~~vw~s~~~~~~~~~rl~  218 (236)
T 1dlp_A          143 -ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFV  218 (236)
T ss_dssp             -SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTTEEEEEETTTEEEEECCCCCSSSCCEEE
T ss_pred             -cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCCcEEEEeCCCcEEEEeCCCCCCCCEEEE
Confidence             478999999999999998  57778888899999999653 44445543111 111111      10 11 23457999


Q ss_pred             EccCCcEEEEE
Q 006347          245 LTAQGILEERI  255 (649)
Q Consensus       245 l~~~G~l~~~~  255 (649)
                      ||+||++++|.
T Consensus       219 Ld~dG~l~ly~  229 (236)
T 1dlp_A          219 LQPDRNLAIYG  229 (236)
T ss_dssp             ECSSSCEEEEC
T ss_pred             EcCCCcEEEeC
Confidence            99999999994

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.5e-35  Score=306.95  Aligned_cols=166  Identities=31%  Similarity=0.546  Sum_probs=143.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            46788899999999999999864      477899999987766778899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          555 IYEYMPNRSLDALLFDP----------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      |||||++|+|.++|+..          .....++|.++++|+.|||+||+|||+++   ||||||||+||||++++++||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            99999999999999642          12357999999999999999999999987   999999999999999999999


Q ss_pred             EecCCceeeCCCCCccccCceeecC
Q 006347          625 SDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       625 ~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      +|||+|+..........+....||+
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~  194 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPI  194 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECG
T ss_pred             CCcccceecCCCCceeecCceecCh
Confidence            9999999876554444445567773

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.1e-35  Score=308.66  Aligned_cols=166  Identities=30%  Similarity=0.516  Sum_probs=135.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45777899999999999999864      478899999987777778899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          555 IYEYMPNRSLDALLFDPL------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      |||||++|+|.++|+...            ...+++|.+++.|+.|||+||+|||+.+   ||||||||+||||++++++
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            999999999999997532            1246999999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeCCCCCccccCceeecC
Q 006347          623 KISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       623 Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      ||+|||+|+.+........++...||+
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~  224 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPI  224 (329)
T ss_dssp             EECCCC----------------CCCCG
T ss_pred             EEcccccceeccCCCcceecCcccccc
Confidence            999999999876554444444566763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1e-34  Score=301.99  Aligned_cols=165  Identities=30%  Similarity=0.470  Sum_probs=140.4

Q ss_pred             CcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3566789999999999999863      46789999997543 3456789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          555 IYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      |||||++|+|.++|....             ....++|.++++|+.|||+||+|||+.+   ||||||||+||||+++++
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence            999999999999996432             1346899999999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeCCCCCccccCceeecC
Q 006347          622 PKISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      +||+|||+|+.+........++...||+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~  211 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPI  211 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCG
T ss_pred             EEECCcccceeccCCCceeEecccccCC
Confidence            9999999999875544444444566763

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.1e-34  Score=294.79  Aligned_cols=163  Identities=32%  Similarity=0.426  Sum_probs=146.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++.   .....+.+.+|++++++++|||||++++++.+.+..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46999999999999999999976 7899999999753   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.++|.+   ...+++.+...++.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+.+...
T Consensus       112 Ey~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            99999999999953   456999999999999999999999998   999999999999999999999999999998766


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      .....+.+.+||+
T Consensus       186 ~~~~~~~~~~GTp  198 (311)
T 4aw0_A          186 SKQARANSFVGTA  198 (311)
T ss_dssp             TTCCCBCCCCSCG
T ss_pred             CCcccccCcccCc
Confidence            5555566688985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.6e-34  Score=298.42  Aligned_cols=160  Identities=26%  Similarity=0.445  Sum_probs=143.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ..|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+.++++++|||||++++++.+++..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            46888999999999999999986 79999999997666666778999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      ++|+|.+++.+    ..+++.++..|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+......
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence            99999999843    45899999999999999999999998   999999999999999999999999999988654432


Q ss_pred             cccCceeecC
Q 006347          640 ADTGRVVGTL  649 (649)
Q Consensus       640 ~~~~~~~GT~  649 (649)
                        ....+||+
T Consensus       227 --~~~~~GTp  234 (346)
T 4fih_A          227 --RKSLVGTP  234 (346)
T ss_dssp             --BCCCCSCG
T ss_pred             --ccccccCc
Confidence              33467884

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=8.2e-34  Score=294.23  Aligned_cols=161  Identities=30%  Similarity=0.536  Sum_probs=132.9

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +++.+.++||+|+||+||+|++.+  .||||+++..  .....++|.+|+.++++++|||||+++|+|.+ ++.+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            567788999999999999999763  6999998643  33456789999999999999999999998864 568999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      |++|+|.++|+.  .+..++|.+++.|+.|||+||+|||+++   ||||||||+||||++++++||+|||+|+.......
T Consensus       113 ~~gGsL~~~l~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          113 CEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             CCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            999999999965  3456999999999999999999999987   99999999999999999999999999998765444


Q ss_pred             ccccCceeecC
Q 006347          639 QADTGRVVGTL  649 (649)
Q Consensus       639 ~~~~~~~~GT~  649 (649)
                      ...+....||+
T Consensus       188 ~~~~~~~~GT~  198 (307)
T 3omv_A          188 SQQVEQPTGSV  198 (307)
T ss_dssp             ------CCCCT
T ss_pred             ceeecccccCC
Confidence            44445577875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4.2e-33  Score=299.87  Aligned_cols=160  Identities=26%  Similarity=0.445  Sum_probs=144.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +.|++.++||+|+||.||+|+.. +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            56889999999999999999976 69999999998766666778999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      ++|+|.+++..    ..+++.++..|+.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+.+......
T Consensus       231 ~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~  303 (423)
T 4fie_A          231 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  303 (423)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred             CCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence            99999999843    45899999999999999999999998   999999999999999999999999999998654433


Q ss_pred             cccCceeecC
Q 006347          640 ADTGRVVGTL  649 (649)
Q Consensus       640 ~~~~~~~GT~  649 (649)
                        ....+||+
T Consensus       304 --~~~~~GTp  311 (423)
T 4fie_A          304 --RKSLVGTP  311 (423)
T ss_dssp             --BCCCEECT
T ss_pred             --ccccccCc
Confidence              34578985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-33  Score=297.53  Aligned_cols=163  Identities=23%  Similarity=0.385  Sum_probs=136.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||+||+|+.. +|+.||||++++.  .....+.|.+|+.++++++|||||++++++.+++..|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            57999999999999999999976 7999999999654  23456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+++|+|.++|... +...+++.+...|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+....
T Consensus       104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             CCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            99999999999642 3445789999999999999999999988   9999999999999999999999999999874322


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                        ..+...+||+
T Consensus       180 --~~~~~~~GT~  189 (350)
T 4b9d_A          180 --ELARACIGTP  189 (350)
T ss_dssp             --HHHHHHHSCC
T ss_pred             --ccccccCCCc
Confidence              1223456774

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.98  E-value=1.3e-32  Score=286.11  Aligned_cols=161  Identities=27%  Similarity=0.410  Sum_probs=130.7

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHH--HHHHHHhcCCCCCccceEEEEEeCC----eEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFM--NEVMVISKLQHRNLVRLLGCCVEGE----EKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~--~E~~~l~~l~H~niv~l~g~~~~~~----~~~l  554 (649)
                      ++|.+.++||+|+||+||+|++. |+.||||+++..   ..+++.  .|+..+.+++|||||+++|+|.+.+    +.+|
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            35777899999999999999985 899999999653   233344  4556667889999999999998764    5799


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      |||||++|+|.++|+.    ..++|..+.+|+.|+|+||+|||++     ..++||||||||+||||++++++||+|||+
T Consensus        79 V~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence            9999999999999953    4689999999999999999999986     234699999999999999999999999999


Q ss_pred             ceeeCCCCCcc--ccCceeecC
Q 006347          630 AKIFGGNQDQA--DTGRVVGTL  649 (649)
Q Consensus       630 a~~~~~~~~~~--~~~~~~GT~  649 (649)
                      |+.........  .+...+||+
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~  176 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTK  176 (303)
T ss_dssp             CEEEETTTTEESCC-----CCG
T ss_pred             CccccCCCCceeeecccccccc
Confidence            99986544322  233467774

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.98  E-value=1.8e-32  Score=284.02  Aligned_cols=154  Identities=27%  Similarity=0.438  Sum_probs=128.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC--------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE--------  550 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------  550 (649)
                      ++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+.++++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            45889999999999999999976 78999999996543 334578999999999999999999999998654        


Q ss_pred             ----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEe
Q 006347          551 ----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISD  626 (649)
Q Consensus       551 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~D  626 (649)
                          ..+|||||+++|+|.+++.........++.....|+.||++||+|||+++   ||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999976544445677888999999999999999998   99999999999999999999999


Q ss_pred             cCCceeeCCCC
Q 006347          627 FGMAKIFGGNQ  637 (649)
Q Consensus       627 FGla~~~~~~~  637 (649)
                      ||+|+.+..+.
T Consensus       162 FGla~~~~~~~  172 (299)
T 4g31_A          162 FGLVTAMDQDE  172 (299)
T ss_dssp             CCCC-------
T ss_pred             CccceecCCCc
Confidence            99999886543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.98  E-value=2.2e-32  Score=281.41  Aligned_cols=158  Identities=28%  Similarity=0.389  Sum_probs=134.2

Q ss_pred             ccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEEEEE
Q 006347          484 QLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKMLIY  556 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~  556 (649)
                      ++.++||+|+||+||+|... +++.||||++...  .....+.|.+|+.++++++|||||++++++.+    .+..+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            55678999999999999976 6889999999643  23456789999999999999999999999875    24579999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~  635 (649)
                      |||++|+|.++|.+   ...+++..+..|+.||++||+|||+++ ++||||||||+||||+. ++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            99999999999953   456899999999999999999999874 46999999999999984 78999999999987533


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      .    .+..++|||
T Consensus       185 ~----~~~~~~GTp  194 (290)
T 3fpq_A          185 S----FAKAVIGTP  194 (290)
T ss_dssp             T----SBEESCSSC
T ss_pred             C----ccCCcccCc
Confidence            2    233467885

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=1.3e-32  Score=291.24  Aligned_cols=176  Identities=28%  Similarity=0.402  Sum_probs=147.7

Q ss_pred             CCHHHHHHHhcCcccceeeccCCcEEEEEEEecC------CcEEEEEEeccccc-ccHHHHHHHHHHHhcCC-CCCccce
Q 006347          471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKASG-QGLEEFMNEVMVISKLQ-HRNLVRL  542 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l  542 (649)
                      ++..+.+...++|++.++||+|+||+||+|....      ++.||||+++.... ...++|.+|+.+|.++. |||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            3444555566789999999999999999998652      35899999976433 34678999999999995 5999999


Q ss_pred             EEEEEeC-CeEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecC
Q 006347          543 LGCCVEG-EEKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRD  608 (649)
Q Consensus       543 ~g~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD  608 (649)
                      +|+|.+. +..+||||||++|+|.++|+...             ....++|.+++.|+.|||+||+|||+++   |||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence            9999875 56899999999999999996421             1345899999999999999999999987   99999


Q ss_pred             CCCCcEEEcCCCceEEEecCCceeeCCCCCccccCceeecC
Q 006347          609 LKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       609 lkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      |||+|||+++++++||+|||+|+.+..+.....++...||+
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~  251 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL  251 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECG
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccc
Confidence            99999999999999999999999886666555556678874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=3.2e-32  Score=285.19  Aligned_cols=159  Identities=26%  Similarity=0.339  Sum_probs=134.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .+.|++.++||+|+||.||+|+.. +|+.||||+++...     .+.+|+.++++++|||||++++++.+++..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356788889999999999999976 68999999996532     224799999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~~~  637 (649)
                      |++|+|.++|.+   ...+++.+...|+.||+.||+|||+++   ||||||||+||||+.++ ++||+|||+|+.+..+.
T Consensus       132 ~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            999999999953   356999999999999999999999987   99999999999999987 69999999999986543


Q ss_pred             Ccc---ccCceeecC
Q 006347          638 DQA---DTGRVVGTL  649 (649)
Q Consensus       638 ~~~---~~~~~~GT~  649 (649)
                      ...   ....++||+
T Consensus       206 ~~~~~~~~~~~~GT~  220 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTE  220 (336)
T ss_dssp             --------CCCCCCG
T ss_pred             cccceecCCccccCc
Confidence            221   223467885

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=7e-32  Score=275.35  Aligned_cols=159  Identities=28%  Similarity=0.498  Sum_probs=127.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+|... +|+.||||++++..   ....+.+.+|+.++++++|||||++++++.+.+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            58999999999999999999975 79999999996532   234567999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+ +|+|.+++.+   ...+++.+...++.||+.||+|||+++   |+||||||+|||+++++++||+|||+|+.....
T Consensus        93 Ey~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           93 EYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             eCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999 6899999853   456999999999999999999999998   999999999999999999999999999987543


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      ..   ..+..||+
T Consensus       166 ~~---~~~~~GT~  175 (275)
T 3hyh_A          166 NF---LKTSCGSP  175 (275)
T ss_dssp             ------------C
T ss_pred             Cc---cCCeeECc
Confidence            22   23467875

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=1.4e-32  Score=284.49  Aligned_cols=161  Identities=29%  Similarity=0.321  Sum_probs=132.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|++.+.||+|+||+||+|+..    +++.||||++++..  .....++.+|+.++++++|||||++++++.+.+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46999999999999999999863    47899999997542  2344578899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.++|.+   ...+++.+...++.||+.||+|||+++   ||||||||+|||+++++++||+|||+|+...
T Consensus       104 vmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            9999999999999953   456999999999999999999999998   9999999999999999999999999999764


Q ss_pred             CCCCccccCceeecC
Q 006347          635 GNQDQADTGRVVGTL  649 (649)
Q Consensus       635 ~~~~~~~~~~~~GT~  649 (649)
                      .....  ..+..||+
T Consensus       178 ~~~~~--~~~~~GT~  190 (304)
T 3ubd_A          178 DHEKK--AYSFCGTV  190 (304)
T ss_dssp             ---CC--CCSCCCCG
T ss_pred             CCCcc--ccccccCc
Confidence            43332  23467874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=272.85  Aligned_cols=162  Identities=25%  Similarity=0.453  Sum_probs=136.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC------Ce
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------EE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~  551 (649)
                      ++|++.++||+|+||+||+|... +|+.||||++++..  ....+.+.+|+.+|++++|||||++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            57999999999999999999976 79999999997542  23456789999999999999999999997643      57


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .|||||||+ |+|.+++..   ...+++.++..++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceee
Confidence            899999995 789999853   467999999999999999999999998   9999999999999999999999999999


Q ss_pred             eeCCCCC--ccccCceeecC
Q 006347          632 IFGGNQD--QADTGRVVGTL  649 (649)
Q Consensus       632 ~~~~~~~--~~~~~~~~GT~  649 (649)
                      .+.....  .......+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~  226 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATR  226 (398)
T ss_dssp             CC-------CCCCCSSCCCC
T ss_pred             ecccCccccccccccceeCh
Confidence            8754322  22334567874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=7.8e-29  Score=263.56  Aligned_cols=146  Identities=23%  Similarity=0.391  Sum_probs=131.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  553 (649)
                      ..++|++.++||+|+||+||+|+.+    +++.||||++.+.  ....++.+|++++.++ +|||||++++++.+.++.+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            4578999999999999999999853    4678999998653  3456788999999998 6999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCcee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKI  632 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~~  632 (649)
                      |||||+++|+|.+++.      .+++.+...++.||++||+|||+++   ||||||||+|||++.+ +.+||+|||+|+.
T Consensus        97 lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           97 IAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             EEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            9999999999999982      3889999999999999999999998   9999999999999977 7999999999997


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      ...
T Consensus       168 ~~~  170 (361)
T 4f9c_A          168 THD  170 (361)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=7.5e-29  Score=278.78  Aligned_cols=159  Identities=30%  Similarity=0.348  Sum_probs=136.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHH---HHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMN---EVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||+||+|+.. +|+.||||++++..   ......+.+   ++.++..++|||||++++++.+.+..|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            56899999999999999999976 68999999996531   222333334   466777889999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||||+++|+|.++|.+   ...+++.....++.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+
T Consensus       269 lVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence            99999999999999953   456999999999999999999999988   999999999999999999999999999988


Q ss_pred             CCCCCccccCceeecC
Q 006347          634 GGNQDQADTGRVVGTL  649 (649)
Q Consensus       634 ~~~~~~~~~~~~~GT~  649 (649)
                      ....    +.+.+||+
T Consensus       343 ~~~~----~~t~~GTp  354 (689)
T 3v5w_A          343 SKKK----PHASVGTH  354 (689)
T ss_dssp             SSCC----CCSCCSCG
T ss_pred             CCCC----CCCccCCc
Confidence            5543    23467885

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=1.6e-28  Score=276.65  Aligned_cols=161  Identities=25%  Similarity=0.432  Sum_probs=142.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.+.||+|+||.||+|... +|+.||||.+........+.+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            57999999999999999999976 78999999997766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC--CceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE--LNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.++|.+  +...+++.+...++.||+.||.|||+++   |+||||||+|||++.+  +.+||+|||+|+.+....
T Consensus       237 ~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          237 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             CCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             CCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            99999999854  3356899999999999999999999998   9999999999999854  899999999999986543


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                      .   .....||+
T Consensus       312 ~---~~~~~GT~  320 (573)
T 3uto_A          312 S---VKVTTGTA  320 (573)
T ss_dssp             E---EEEECSSG
T ss_pred             c---eeeeEECc
Confidence            2   22356763

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=9.3e-28  Score=251.23  Aligned_cols=175  Identities=43%  Similarity=0.683  Sum_probs=151.0

Q ss_pred             CCHHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC
Q 006347          471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE  550 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  550 (649)
                      +.+.++...+++|++.+.||+|+||.||+|+..+++.||||++........+++.+|+.++.+++||||+++++++.+.+
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            44445566788999999999999999999998889999999997766667789999999999999999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~  185 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI  185 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence            99999999999999999965322 346899999999999999999999987   99999999999999999999999999


Q ss_pred             ceeeCCCCCccccCceeec
Q 006347          630 AKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       630 a~~~~~~~~~~~~~~~~GT  648 (649)
                      ++...............||
T Consensus       186 ~~~~~~~~~~~~~~~~~gt  204 (321)
T 2qkw_B          186 SKKGTELDQTHLSTVVKGT  204 (321)
T ss_dssp             CEECSSSSCCCCBCCCEEE
T ss_pred             ccccccccccccccccCCC
Confidence            9986543333223334555

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=7e-27  Score=244.94  Aligned_cols=162  Identities=29%  Similarity=0.462  Sum_probs=145.4

Q ss_pred             CCCCCHHHHHHHhcC----------cccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCC
Q 006347          468 LPLFQFEELATATNN----------FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH  536 (649)
Q Consensus       468 ~~~~~~~~l~~~~~~----------f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H  536 (649)
                      .+.+++++++.+++.          |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            356888888888764          666789999999999999987 799999999977666677889999999999999


Q ss_pred             CCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       537 ~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +||+++++++...+..++||||+++++|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+|||+
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll  174 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILL  174 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEE
Confidence            9999999999999999999999999999999843    46899999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCC
Q 006347          617 DEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +.++.+||+|||+++.+...
T Consensus       175 ~~~~~~kl~Dfg~~~~~~~~  194 (321)
T 2c30_A          175 TLDGRVKLSDFGFCAQISKD  194 (321)
T ss_dssp             CTTCCEEECCCTTCEECCSS
T ss_pred             CCCCcEEEeeeeeeeecccC
Confidence            99999999999999987544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=1.1e-27  Score=261.21  Aligned_cols=172  Identities=22%  Similarity=0.288  Sum_probs=146.0

Q ss_pred             CHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEE
Q 006347          472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCV  547 (649)
Q Consensus       472 ~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~  547 (649)
                      .+.++....++|++.++||+|+||+||+|+.. +++.||||++++..   ....+.+.+|+.++.+++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            34555666789999999999999999999987 57899999996522   223345899999999999999999999999


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +.+..+|||||+++|+|.+++..  ....+++..+..++.||+.||+|||+.+   ||||||||+|||++.++.+||+||
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF  219 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF  219 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence            99999999999999999999964  2356899999999999999999999988   999999999999999999999999


Q ss_pred             CCceeeCCCCCccccCceeecC
Q 006347          628 GMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       628 Gla~~~~~~~~~~~~~~~~GT~  649 (649)
                      |+|+.+....... .....||+
T Consensus       220 Gla~~~~~~~~~~-~~~~~GT~  240 (437)
T 4aw2_A          220 GSCLKLMEDGTVQ-SSVAVGTP  240 (437)
T ss_dssp             TTCEECCTTSCEE-CCSCCSCG
T ss_pred             hhhhhcccCCCcc-cccccCCc
Confidence            9999875543322 22345663

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=8e-27  Score=242.17  Aligned_cols=178  Identities=42%  Similarity=0.661  Sum_probs=153.7

Q ss_pred             CCCCCCHHHHHHHhcCcccc------eeeccCCcEEEEEEEecCCcEEEEEEecccc----cccHHHHHHHHHHHhcCCC
Q 006347          467 DLPLFQFEELATATNNFQLS------SKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH  536 (649)
Q Consensus       467 ~~~~~~~~~l~~~~~~f~~~------~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H  536 (649)
                      ..+.|++.++..++++|...      +.||+|+||.||+|.. +++.||||++....    ....+.+.+|+.++.+++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            45679999999999999877      8899999999999997 48899999986432    3346789999999999999


Q ss_pred             CCccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       537 ~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      |||+++++++.+.+..++||||+++++|.+++........+++..+..++.|+++||+|||+.+   |+||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence            9999999999999999999999999999999975444567999999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          617 DEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      ++++.+||+|||+++...............||
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~  198 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGT  198 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSC
T ss_pred             cCCCcEEEeecccccccccccccccccccCCC
Confidence            99999999999999987554333223334444

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=2.7e-27  Score=247.97  Aligned_cols=172  Identities=47%  Similarity=0.751  Sum_probs=151.0

Q ss_pred             cCCCCCCCHHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceE
Q 006347          465 LQDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLL  543 (649)
Q Consensus       465 ~~~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~  543 (649)
                      ...+..+++.++....++|++.+.||+|+||.||+|...+++.||||++..... .....+.+|+.++.+++||||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            345668899999999999999999999999999999988899999999975432 2344789999999999999999999


Q ss_pred             EEEEeCCeEEEEEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          544 GCCVEGEEKMLIYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       544 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      +++.+.+..++||||+++|+|.+++.... ....+++..+..|+.|++.||+|||+.+..+|+||||||+|||+++++.+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            99999999999999999999999997643 23459999999999999999999999833349999999999999999999


Q ss_pred             EEEecCCceeeCCC
Q 006347          623 KISDFGMAKIFGGN  636 (649)
Q Consensus       623 Ki~DFGla~~~~~~  636 (649)
                      ||+|||+++.+...
T Consensus       174 kl~Dfg~~~~~~~~  187 (326)
T 3uim_A          174 VVGDFGLAKLMDYK  187 (326)
T ss_dssp             EECCCSSCEECCSS
T ss_pred             EeccCccccccCcc
Confidence            99999999987543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=9.8e-27  Score=242.11  Aligned_cols=151  Identities=27%  Similarity=0.519  Sum_probs=138.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|.+.+.||+|+||+||++... +++.||+|++........+.|.+|+.++.+++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            56888899999999999999986 68999999997766677789999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++++|.+++...  ...+++.++..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+...
T Consensus        90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            999999999642  456899999999999999999999988   999999999999999999999999999987543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.94  E-value=1.1e-26  Score=240.61  Aligned_cols=150  Identities=28%  Similarity=0.471  Sum_probs=137.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.+.||+|+||+||+|... +++.||||++........+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   99 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence            57889999999999999999964 78999999997666666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+....
T Consensus       100 ~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A          100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            99999999953    35899999999999999999999987   9999999999999999999999999999876544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.94  E-value=5.6e-27  Score=253.75  Aligned_cols=168  Identities=24%  Similarity=0.315  Sum_probs=143.3

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      +.+++...++|.+.+.||+|+||+||+++.. +++.||||++++.   .....+.+.+|+.++..++|||||++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3445556678999999999999999999987 6889999998652   12344568899999999999999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      .+..+|||||+++|+|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG  213 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG  213 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccc
Confidence            9999999999999999999853    35899999999999999999999988   9999999999999999999999999


Q ss_pred             CceeeCCCCCccccCceeec
Q 006347          629 MAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       629 la~~~~~~~~~~~~~~~~GT  648 (649)
                      +|+.+...... ......||
T Consensus       214 ~a~~~~~~~~~-~~~~~~gt  232 (410)
T 3v8s_A          214 TCMKMNKEGMV-RCDTAVGT  232 (410)
T ss_dssp             TCEECCTTSEE-ECCSCCSC
T ss_pred             eeEeeccCCcc-cccCCcCC
Confidence            99987544321 22235565

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=2.3e-26  Score=240.81  Aligned_cols=153  Identities=26%  Similarity=0.434  Sum_probs=135.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe-------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE-------  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-------  551 (649)
                      ++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+...       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            56888999999999999999987 79999999996433 3456789999999999999999999999976542       


Q ss_pred             --------------------------------------------------EEEEEecCCCCChhhhhcCCCCCCCCCHHH
Q 006347          552 --------------------------------------------------KMLIYEYMPNRSLDALLFDPLKKERLDWRK  581 (649)
Q Consensus       552 --------------------------------------------------~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~  581 (649)
                                                                        .++||||+++++|.+++.........++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                              799999999999999998765555678888


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          582 RFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       582 ~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++.++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus       166 ~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred             HHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence            9999999999999999988   999999999999999999999999999988654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=1.8e-26  Score=243.56  Aligned_cols=160  Identities=27%  Similarity=0.326  Sum_probs=139.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+++.. +++.||||.+++.   .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            57889999999999999999976 6899999999753   2345678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.....
T Consensus        85 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           85 EYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             ECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            99999999999853   356899999999999999999999987   999999999999999999999999999975333


Q ss_pred             CCccccCceeec
Q 006347          637 QDQADTGRVVGT  648 (649)
Q Consensus       637 ~~~~~~~~~~GT  648 (649)
                      ...  .....||
T Consensus       159 ~~~--~~~~~gt  168 (337)
T 1o6l_A          159 GAT--MKTFCGT  168 (337)
T ss_dssp             TCC--BCCCEEC
T ss_pred             CCc--ccccccC
Confidence            222  2235666

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.94  E-value=1e-26  Score=251.82  Aligned_cols=171  Identities=25%  Similarity=0.308  Sum_probs=145.1

Q ss_pred             CHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEE
Q 006347          472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCV  547 (649)
Q Consensus       472 ~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~  547 (649)
                      .++++....++|++.+.||+|+||+||+++.. +++.||||++++..   ....+.+.+|..++.+++|+||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            34455556688999999999999999999986 78999999996532   234456889999999999999999999999


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +.+..+|||||+++|+|.+++.+.  ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++++||+||
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence            999999999999999999999542  246899999999999999999999987   999999999999999999999999


Q ss_pred             CCceeeCCCCCccccCceeec
Q 006347          628 GMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       628 Gla~~~~~~~~~~~~~~~~GT  648 (649)
                      |+|+.+...... ......||
T Consensus       207 Gla~~~~~~~~~-~~~~~~Gt  226 (412)
T 2vd5_A          207 GSCLKLRADGTV-RSLVAVGT  226 (412)
T ss_dssp             TTCEECCTTSCE-ECSSCCSC
T ss_pred             hhheeccCCCcc-ccceeccc
Confidence            999987554322 12234565

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=1.9e-26  Score=242.48  Aligned_cols=151  Identities=31%  Similarity=0.525  Sum_probs=136.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .++|++.+.||+|+||.||+|... +|+.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            467999999999999999999974 7999999999654  2345677899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++.++..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus        94 e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  167 (328)
T 3fe3_A           94 EYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG  167 (328)
T ss_dssp             CCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred             ECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence            99999999999853   356899999999999999999999988   999999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.94  E-value=1.9e-26  Score=246.63  Aligned_cols=155  Identities=28%  Similarity=0.515  Sum_probs=136.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      .++|.+.+.||+|+||.||+|+..        ++..||||+++... ....+++.+|+.++.++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            367888999999999999999852        35679999997543 34567899999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +..++||||+++|+|.+++....             ....+++.+++.++.||++||+|||+.+   |+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            99999999999999999996432             1245899999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCCC
Q 006347          617 DEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++++.+||+|||+|+.+....
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~  257 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNID  257 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCC
T ss_pred             CCCCCEEEccccCCcccCccc
Confidence            999999999999999875443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.94  E-value=2.4e-26  Score=241.15  Aligned_cols=162  Identities=30%  Similarity=0.445  Sum_probs=137.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            67999999999999999999977 78999999986432 23346789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      +++++|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.....
T Consensus        87 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           87 CSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             CTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             CCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            999999999853   345899999999999999999999988   99999999999999999999999999998753333


Q ss_pred             ccccCceeec
Q 006347          639 QADTGRVVGT  648 (649)
Q Consensus       639 ~~~~~~~~GT  648 (649)
                      ........||
T Consensus       161 ~~~~~~~~gt  170 (323)
T 3tki_A          161 ERLLNKMCGT  170 (323)
T ss_dssp             ECCBCSCCSC
T ss_pred             ccccCCCccC
Confidence            2222334454

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=2.1e-26  Score=241.26  Aligned_cols=163  Identities=31%  Similarity=0.493  Sum_probs=136.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC----eEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE----EKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV  555 (649)
                      .++|++.+.||+|+||.||+|+.. ++.||||++... ......+..|+.++.+++||||+++++++.+..    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            367899999999999999999887 789999999653 334455667999999999999999999998854    46999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------CCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-------SRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      |||+++|+|.+++..    ..+++..+..++.|+++||+|||+.       ...+|+||||||+|||+++++.+||+|||
T Consensus       101 ~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            999999999999953    4589999999999999999999987       01139999999999999999999999999


Q ss_pred             CceeeCCCCCccccCceeec
Q 006347          629 MAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       629 la~~~~~~~~~~~~~~~~GT  648 (649)
                      +|+.+.............||
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt  196 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGT  196 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCC
T ss_pred             cccccccccCccccccCccC
Confidence            99988655443333334555

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=2.2e-26  Score=244.41  Aligned_cols=150  Identities=33%  Similarity=0.460  Sum_probs=134.1

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  553 (649)
                      ..++|++.+.||+|+||.||+++.. +++.||||++++.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            3468999999999999999999976 6899999999753   234567788999999988 7999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus       101 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence            99999999999999853   356899999999999999999999988   999999999999999999999999999964


Q ss_pred             C
Q 006347          634 G  634 (649)
Q Consensus       634 ~  634 (649)
                      .
T Consensus       175 ~  175 (353)
T 3txo_A          175 I  175 (353)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.93  E-value=2.8e-26  Score=244.56  Aligned_cols=167  Identities=16%  Similarity=0.154  Sum_probs=138.7

Q ss_pred             HHHHhcCcccceeeccCCcEEEEEEE------ecCCcEEEEEEecccccccHHHHHHHHHHHhcCC---CCCccceEEEE
Q 006347          476 LATATNNFQLSSKLGQGGFGPVYWGR------LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ---HRNLVRLLGCC  546 (649)
Q Consensus       476 l~~~~~~f~~~~~LG~G~fG~Vykg~------~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~  546 (649)
                      +....++|.+.+.||+|+||+||+|.      ..+++.||||+++..   ...++..|+.++.+++   |+||+++++++
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            33445779999999999999999994      346889999999653   4567888888888886   99999999999


Q ss_pred             EeCCeEEEEEecCCCCChhhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC------
Q 006347          547 VEGEEKMLIYEYMPNRSLDALLFDP--LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE------  618 (649)
Q Consensus       547 ~~~~~~~lV~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~------  618 (649)
                      .+++..+|||||+++|+|.+++...  .....+++..+..|+.||++||+|||+.+   ||||||||+|||++.      
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC-
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcc
Confidence            9999999999999999999999632  13456999999999999999999999987   999999999999998      


Q ss_pred             -----CCceEEEecCCceeeCCCCCccccCceeec
Q 006347          619 -----ELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       619 -----~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                           ++.+||+|||+|+.+.............||
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  248 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCET  248 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCTTEEECCSSCT
T ss_pred             ccccccCCEEEeeCchhhhhhccCCCceeeeecCC
Confidence                 899999999999876433222223334565

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.93  E-value=7e-26  Score=234.27  Aligned_cols=149  Identities=29%  Similarity=0.493  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--------------------------ccHHHHHHHHHHHhc
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--------------------------QGLEEFMNEVMVISK  533 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--------------------------~~~~~f~~E~~~l~~  533 (649)
                      ++|++.+.||+|+||.||+|... +++.||||++.....                          ...+++.+|+.++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            67899999999999999999875 688999999864321                          123568999999999


Q ss_pred             CCCCCccceEEEEEe--CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCC
Q 006347          534 LQHRNLVRLLGCCVE--GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKA  611 (649)
Q Consensus       534 l~H~niv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp  611 (649)
                      ++||||+++++++.+  .+..++||||+++++|.+++    ....+++..+..++.||++||+|||+.+   |+||||||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp  165 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP  165 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence            999999999999987  56789999999999998765    3457999999999999999999999987   99999999


Q ss_pred             CcEEEcCCCceEEEecCCceeeCCC
Q 006347          612 SNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       612 ~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +|||++.++.+||+|||+++.+...
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~  190 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGS  190 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSS
T ss_pred             HHEEECCCCCEEEecCCCccccccc
Confidence            9999999999999999999987543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=7e-26  Score=237.74  Aligned_cols=151  Identities=30%  Similarity=0.598  Sum_probs=134.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|...    .+..||||+++.. .....++|.+|+.++.+++||||+++++++.+++..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            46788899999999999999975    3456999999754 334567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..  ....+++..+..|+.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       129 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          129 TEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             EECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             eeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            999999999999964  2356899999999999999999999988   99999999999999999999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       204 ~  204 (325)
T 3kul_A          204 D  204 (325)
T ss_dssp             -
T ss_pred             C
Confidence            4

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.93  E-value=3.4e-26  Score=246.32  Aligned_cols=160  Identities=29%  Similarity=0.383  Sum_probs=136.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||+||+++.. +++.||||++++..   ....+.+..|..++.++ +|||||++++++.+.+..+||
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            57899999999999999999987 57899999997542   23445688999999887 899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+....
T Consensus       132 ~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            999999999999853   356899999999999999999999988   99999999999999999999999999997433


Q ss_pred             CCCccccCceeec
Q 006347          636 NQDQADTGRVVGT  648 (649)
Q Consensus       636 ~~~~~~~~~~~GT  648 (649)
                      ....  +....||
T Consensus       206 ~~~~--~~~~~gt  216 (396)
T 4dc2_A          206 PGDT--TSTFCGT  216 (396)
T ss_dssp             TTCC--BCCCCBC
T ss_pred             CCCc--cccccCC
Confidence            2222  2335566

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.93  E-value=1.6e-25  Score=238.47  Aligned_cols=151  Identities=30%  Similarity=0.415  Sum_probs=135.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|.+.+.||+|+||.||++... +|+.||||.+++...      ...+++.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            467899999999999999999986 689999999975432      1357899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecC
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFG  628 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFG  628 (649)
                      ++||||+++|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||+++++    .+||+|||
T Consensus        91 ~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            999999999999999943   456899999999999999999999987   99999999999998877    79999999


Q ss_pred             CceeeCCC
Q 006347          629 MAKIFGGN  636 (649)
Q Consensus       629 la~~~~~~  636 (649)
                      +++.+...
T Consensus       165 ~a~~~~~~  172 (361)
T 2yab_A          165 LAHEIEDG  172 (361)
T ss_dssp             SCEECCTT
T ss_pred             CceEcCCC
Confidence            99987543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.93  E-value=5.2e-26  Score=235.14  Aligned_cols=150  Identities=29%  Similarity=0.460  Sum_probs=134.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||++... +++.||||.+....   ....+.|.+|+.++.+++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            357899999999999999999976 68999999985432   23457899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..   ...+++.++..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        90 ~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            999999999999953   346899999999999999999999988   99999999999999999999999999987743

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=3.2e-26  Score=238.66  Aligned_cols=157  Identities=30%  Similarity=0.588  Sum_probs=132.5

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ....++|++.+.||+|+||+||+|+.. ++.||||++....  ....++|.+|+.++.+++||||+++++++.+.+..++
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            344567899999999999999999874 8899999986543  3345689999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++........+++..++.++.|+++||+|||+.+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA  190 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence            9999999999999975433345899999999999999999999874 359999999999999999999999999998754


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       191 ~  191 (309)
T 3p86_A          191 S  191 (309)
T ss_dssp             -
T ss_pred             c
Confidence            3

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=4.7e-26  Score=241.12  Aligned_cols=152  Identities=32%  Similarity=0.426  Sum_probs=134.7

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      ....++|.+.+.||+|+||.||+|+.. +++.||||++++..   ....+.+..|..++.++ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            344578999999999999999999986 68899999997532   34567788999999887 89999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus        93 ~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            9999999999999999953   356899999999999999999999988   9999999999999999999999999999


Q ss_pred             eeC
Q 006347          632 IFG  634 (649)
Q Consensus       632 ~~~  634 (649)
                      ...
T Consensus       167 ~~~  169 (345)
T 1xjd_A          167 ENM  169 (345)
T ss_dssp             CCC
T ss_pred             hcc
Confidence            753

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.93  E-value=7.8e-26  Score=236.72  Aligned_cols=149  Identities=32%  Similarity=0.465  Sum_probs=135.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+++.. +|+.||||.+++..   ....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            56889999999999999999986 68999999996532   245677889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+....
T Consensus        86 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           86 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            99999999999953   356899999999999999999999987   99999999999999999999999999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.93  E-value=8.2e-26  Score=242.50  Aligned_cols=150  Identities=25%  Similarity=0.393  Sum_probs=136.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||++... +++.||||.+.+.   .....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            56889999999999999999976 6889999998653   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus        95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            99999999999954   356899999999999999999999988   999999999999999999999999999987543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=3.7e-26  Score=244.61  Aligned_cols=151  Identities=32%  Similarity=0.600  Sum_probs=128.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|+..    ++..||||+++.. .....++|.+|+.++.+++||||+++++++.+.+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            46888999999999999999875    5678999999754 334567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++..  ....+++.+++.++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       125 ~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          125 TEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999999999999964  2346899999999999999999999987   99999999999999999999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       200 ~  200 (373)
T 2qol_A          200 D  200 (373)
T ss_dssp             -
T ss_pred             C
Confidence            4

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.93  E-value=2.1e-26  Score=244.41  Aligned_cols=176  Identities=27%  Similarity=0.398  Sum_probs=144.6

Q ss_pred             CCCHHHHHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccc
Q 006347          470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVR  541 (649)
Q Consensus       470 ~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~  541 (649)
                      .+...+.....++|++.+.||+|+||.||+|...      +++.||||+++... ....+.+.+|+.++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3455666667789999999999999999999742      46789999997643 33457799999999999 7999999


Q ss_pred             eEEEEEeCCe-EEEEEecCCCCChhhhhcCCCC-----------------------------------------------
Q 006347          542 LLGCCVEGEE-KMLIYEYMPNRSLDALLFDPLK-----------------------------------------------  573 (649)
Q Consensus       542 l~g~~~~~~~-~~lV~Ey~~~gsL~~~l~~~~~-----------------------------------------------  573 (649)
                      +++++.+.+. .++||||+++|+|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            9999988654 8999999999999999975422                                               


Q ss_pred             ----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          574 ----------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       574 ----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                                      ...+++..++.++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                            122889999999999999999999987   9999999999999999999999999999875444


Q ss_pred             CccccCceeec
Q 006347          638 DQADTGRVVGT  648 (649)
Q Consensus       638 ~~~~~~~~~GT  648 (649)
                      .........||
T Consensus       248 ~~~~~~~~~~t  258 (359)
T 3vhe_A          248 DYVRKGDARLP  258 (359)
T ss_dssp             TCEEC--CEEC
T ss_pred             cchhccccCCC
Confidence            33333334554

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=3.1e-26  Score=245.57  Aligned_cols=151  Identities=30%  Similarity=0.528  Sum_probs=135.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|.+.+.||+|+||.||+|... +++.||||.++... ....++|.+|+.++.+++||||+++++++.+.+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            457888999999999999999987 78999999987543 2344678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++|+|.+++..  ....+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+....
T Consensus       193 ~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          193 LVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             CCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            9999999999964  2345899999999999999999999988   99999999999999999999999999997643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.3e-25  Score=233.49  Aligned_cols=151  Identities=21%  Similarity=0.334  Sum_probs=135.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||++... +++.+|+|.+... ......+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            367899999999999999999976 6889999998643 34556789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC--CCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE--ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~--~~~~Ki~DFGla~~~~~~  636 (649)
                      +++|+|.+++..  ....+++.++..++.||++||.|||+.+   |+||||||+|||++.  ++.+||+|||+++.+...
T Consensus        83 ~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            999999999954  2346899999999999999999999987   999999999999997  789999999999987543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=233.98  Aligned_cols=154  Identities=31%  Similarity=0.472  Sum_probs=136.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC--eEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE--EKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~  556 (649)
                      ++|.+.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++.+++||||+++++++.+.+  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56889999999999999999987 58999999997543 345678899999999999999999999998766  779999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE----cCCCceEEEecCCcee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAKI  632 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~Ki~DFGla~~  632 (649)
                      ||+++++|.+++........+++..+..++.||++||+|||+.+   |+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            99999999999976544455999999999999999999999987   9999999999999    7888899999999998


Q ss_pred             eCCCC
Q 006347          633 FGGNQ  637 (649)
Q Consensus       633 ~~~~~  637 (649)
                      +....
T Consensus       166 ~~~~~  170 (319)
T 4euu_A          166 LEDDE  170 (319)
T ss_dssp             CCTTC
T ss_pred             cCCCC
Confidence            75443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=6.9e-26  Score=239.89  Aligned_cols=147  Identities=30%  Similarity=0.396  Sum_probs=132.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+++.. +++.||||++++..   ....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            56888999999999999999986 68899999997542   23456788999999988 899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+|+..
T Consensus        89 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            999999999999853   346899999999999999999999987   999999999999999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=1.3e-25  Score=238.26  Aligned_cols=149  Identities=28%  Similarity=0.375  Sum_probs=135.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57888999999999999999976 68999999986532   245678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       121 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccC
Confidence            99999999999953   346899999999999999999999988   99999999999999999999999999998754

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.93  E-value=3.2e-25  Score=232.81  Aligned_cols=150  Identities=30%  Similarity=0.408  Sum_probs=135.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|.+.+.||+|+||.||++... +++.||||.+.....      ...+++.+|+.++.+++||||+++++++.+.+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            46888999999999999999986 689999999865322      24678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecCC
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFGM  629 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFGl  629 (649)
                      +||||+++++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||+++++    .+||+|||+
T Consensus        91 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           91 LILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            99999999999999953   456899999999999999999999987   99999999999999887    799999999


Q ss_pred             ceeeCCC
Q 006347          630 AKIFGGN  636 (649)
Q Consensus       630 a~~~~~~  636 (649)
                      |+.+...
T Consensus       165 a~~~~~~  171 (326)
T 2y0a_A          165 AHKIDFG  171 (326)
T ss_dssp             CEECCTT
T ss_pred             CeECCCC
Confidence            9987543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.93  E-value=1.8e-25  Score=233.14  Aligned_cols=150  Identities=28%  Similarity=0.476  Sum_probs=132.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||+||+|...+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            36799999999999999999999889999999986432  2335788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |++ ++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       100 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A          100 FME-KDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             CCS-EEHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             CCC-CCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            997 488888754  3345899999999999999999999987   99999999999999999999999999998753

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=1.3e-25  Score=228.53  Aligned_cols=149  Identities=30%  Similarity=0.534  Sum_probs=136.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||+|...+++.||||++... ....+++.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            568888999999999999999988899999999754 3456789999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus        89 ~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           89 HGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             TCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccc
Confidence            9999999964  3456899999999999999999999988   99999999999999999999999999987643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.93  E-value=2.5e-25  Score=229.47  Aligned_cols=149  Identities=24%  Similarity=0.458  Sum_probs=131.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||+||+|... +++.||||++....  ....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57889999999999999999986 68999999996533  2345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++ +|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        82 ~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            9976 55555432  2456899999999999999999999997   99999999999999999999999999998753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=1e-25  Score=239.29  Aligned_cols=150  Identities=30%  Similarity=0.377  Sum_probs=134.4

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  553 (649)
                      ..++|++.+.||+|+||.||+++.. +++.||||++++.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3468999999999999999999987 4789999999753   234567788999999988 8999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus        98 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            99999999999999953   346899999999999999999999987   999999999999999999999999999975


Q ss_pred             C
Q 006347          634 G  634 (649)
Q Consensus       634 ~  634 (649)
                      .
T Consensus       172 ~  172 (353)
T 2i0e_A          172 I  172 (353)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=8.8e-26  Score=237.19  Aligned_cols=148  Identities=30%  Similarity=0.391  Sum_probs=125.1

Q ss_pred             cCcccceeeccCCcEEEEEEEe----cCCcEEEEEEecccc----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL----KDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~----~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      ++|++.+.||+|+||.||+++.    .+++.||||++++..    ......+.+|+.++.+++||||+++++++.+.+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            5789999999999999999987    478999999997542    23456788999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           97 YLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            999999999999999853   346889999999999999999999987   99999999999999999999999999987


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      ..
T Consensus       171 ~~  172 (327)
T 3a62_A          171 SI  172 (327)
T ss_dssp             --
T ss_pred             cc
Confidence            53

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=3.6e-25  Score=237.98  Aligned_cols=152  Identities=24%  Similarity=0.378  Sum_probs=136.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||+|... +++.||+|.+..........+.+|+.++.+++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            357999999999999999999976 6889999999765555667899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC--CCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE--ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~--~~~~Ki~DFGla~~~~~~  636 (649)
                      +++|+|.+++..  ....+++.++..++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+|+.+...
T Consensus       130 ~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            999999999854  2346899999999999999999999987   999999999999974  578999999999987554

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.93  E-value=1.4e-25  Score=238.10  Aligned_cols=153  Identities=26%  Similarity=0.379  Sum_probs=134.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +.|++.+.||+|+||.||++... +++.||||++....     ....+++.+|+.++.+++||||+++++++.+.+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            56889999999999999999876 68999999986421     2246789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCCc
Q 006347          555 IYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMA  630 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGla  630 (649)
                      ||||+++++|.+++.... ....+++..+..++.||++||+|||+.+   |+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            999999999988875422 2345899999999999999999999987   999999999999987654   999999999


Q ss_pred             eeeCCC
Q 006347          631 KIFGGN  636 (649)
Q Consensus       631 ~~~~~~  636 (649)
                      +.+...
T Consensus       181 ~~~~~~  186 (351)
T 3c0i_A          181 IQLGES  186 (351)
T ss_dssp             EECCTT
T ss_pred             eEecCC
Confidence            987654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=2.3e-25  Score=226.50  Aligned_cols=152  Identities=31%  Similarity=0.521  Sum_probs=137.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|++.+.||+|+||.||++...++..||||++... ....+++.+|+.++.+++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            3578889999999999999999998889999999754 345678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++++|.+++...  ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        86 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           86 SNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             TTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             CCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999999542  345899999999999999999999987   9999999999999999999999999999875443

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=4.6e-26  Score=240.14  Aligned_cols=157  Identities=29%  Similarity=0.520  Sum_probs=137.6

Q ss_pred             HHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          476 LATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       476 l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      +....++|++.+.||+|+||.||+|+..      +++.||||.++... ....++|.+|+.++.+++||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445578999999999999999999975      34789999997543 3345789999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEec
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLK---------------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHR  607 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr  607 (649)
                      ++..++||||+++|+|.+++.....                     ...+++.+++.++.||++||.|||+.+   |+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence            9999999999999999999964211                     256899999999999999999999987   9999


Q ss_pred             CCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          608 DLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       608 Dlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||||+|||+++++.+||+|||+++.+..
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  226 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYS  226 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred             CCCcceEEECCCCeEEEeecCCCccccc
Confidence            9999999999999999999999987643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=6.5e-26  Score=234.03  Aligned_cols=151  Identities=36%  Similarity=0.627  Sum_probs=132.1

Q ss_pred             cCcccceeeccCCcEEEEEEEe-----cCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~  553 (649)
                      ++|++.+.||+|+||.||++++     .+++.||||++........+++.+|+.++.+++||||+++++++.+.  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5788899999999999999984     26889999999876666678899999999999999999999998654  4589


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++|+|.+++...  ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+
T Consensus        90 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             EEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             EEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            999999999999999642  345899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       165 ~~~  167 (295)
T 3ugc_A          165 PQD  167 (295)
T ss_dssp             ---
T ss_pred             cCC
Confidence            543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.93  E-value=7.9e-26  Score=235.16  Aligned_cols=156  Identities=31%  Similarity=0.480  Sum_probs=136.6

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ..++|.+.+.||+|+||.||++...      +++.||||.+.... ....+++.+|+.++.+++||||+++++++.+.+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            3467889999999999999999862      45789999997543 3456789999999999999999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK---------------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLK  610 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk  610 (649)
                      .++||||+++++|.+++.....                     ...+++.+++.++.||++||+|||+.+   |+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence            9999999999999999965322                     234889999999999999999999987   9999999


Q ss_pred             CCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          611 ASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       611 p~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+|||+++++.+||+|||+++.+....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~  204 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEED  204 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTS
T ss_pred             hheEEEcCCCCEEEccccccccccccc
Confidence            999999999999999999999875543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.8e-25  Score=235.88  Aligned_cols=168  Identities=28%  Similarity=0.421  Sum_probs=138.9

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      ...++|.+.+.||+|+||.||+|...      ++..||||.+... .....+.+.+|+.++.++ +||||+++++++.+.
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            34578899999999999999999962      4568999999753 234567899999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKK--------------------ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDL  609 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl  609 (649)
                      +..++||||+++|+|.+++......                    ..+++..++.++.||++||+|||+.+   |+||||
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Di  198 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDL  198 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTC
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCC
Confidence            9999999999999999999753221                    34899999999999999999999987   999999


Q ss_pred             CCCcEEEcCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          610 KASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       610 kp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      ||+|||++.++.+||+|||+++.+.............||
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t  237 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP  237 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEEC
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCc
Confidence            999999999999999999999987554433333334444

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.93  E-value=6e-26  Score=248.83  Aligned_cols=149  Identities=28%  Similarity=0.324  Sum_probs=125.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||++... +++.||||++...   .......+.+|+.++.+++||||+++++++.+.+..+||
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            357899999999999999999976 6899999999753   234456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |||+++|+|.+++..   ...+++..+..++.||++||+|||+ .+   |+||||||+|||++.++.+||+|||+|+...
T Consensus       227 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999853   3568999999999999999999997 76   9999999999999999999999999998643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.93  E-value=2.8e-25  Score=237.81  Aligned_cols=146  Identities=29%  Similarity=0.421  Sum_probs=127.0

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      .+.||+|+||.||+|... +|+.||||+++.......+++.+|+.++.+++||||+++++++.+.+..+|||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            568999999999999875 6899999999776556678899999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE--cCCCceEEEecCCceeeCCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL--DEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl--~~~~~~Ki~DFGla~~~~~~  636 (649)
                      .+++..  ....+++..+..++.||++||+|||+.+   |+||||||+|||+  ++++.+||+|||+++.+...
T Consensus       174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          174 FDRIID--ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            998854  2345899999999999999999999988   9999999999999  56789999999999987544

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.93  E-value=4e-25  Score=235.60  Aligned_cols=152  Identities=27%  Similarity=0.427  Sum_probs=134.9

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ..++|.+.+.||+|+||.||++... +++.||||.+....  ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3467999999999999999999976 68999999996532  33557889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCCcee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAKI  632 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGla~~  632 (649)
                      |||+++|+|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||++.+   +.+||+|||+|+.
T Consensus       107 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          107 FDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             ECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            999999999999853   456899999999999999999999987   9999999999999865   4599999999998


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      +...
T Consensus       181 ~~~~  184 (362)
T 2bdw_A          181 VNDS  184 (362)
T ss_dssp             CTTC
T ss_pred             ecCC
Confidence            7543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.93  E-value=4.2e-25  Score=228.21  Aligned_cols=147  Identities=29%  Similarity=0.455  Sum_probs=127.5

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhc--CCCCCccceEEEEEeC----CeEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK--LQHRNLVRLLGCCVEG----EEKM  553 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~  553 (649)
                      .++|++.+.||+|+||+||+|+. +++.||||++..   ...+.+..|.+++..  ++||||+++++++.+.    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46789999999999999999998 589999999854   344566777777666  7999999999997753    4578


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH--------RDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      +||||+++|+|.+++.    ...+++..++.++.|+++||+|||        +.+   |+||||||+|||++.++.+||+
T Consensus        83 lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             EehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            9999999999999993    346899999999999999999999        555   9999999999999999999999


Q ss_pred             ecCCceeeCCCC
Q 006347          626 DFGMAKIFGGNQ  637 (649)
Q Consensus       626 DFGla~~~~~~~  637 (649)
                      |||+|+......
T Consensus       156 Dfg~a~~~~~~~  167 (301)
T 3q4u_A          156 DLGLAVMHSQST  167 (301)
T ss_dssp             CCTTCEEEETTT
T ss_pred             eCCCeeeccccc
Confidence            999999875543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.92  E-value=4.3e-25  Score=225.58  Aligned_cols=151  Identities=24%  Similarity=0.400  Sum_probs=137.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||+|... ++..+|+|++........+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            456899999999999999999986 5779999999876666788999999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+|||+   +.++.+||+|||+++.+..
T Consensus        88 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           88 CTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             CCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            999999998853   355899999999999999999999988   9999999999999   7889999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       162 ~  162 (277)
T 3f3z_A          162 G  162 (277)
T ss_dssp             T
T ss_pred             c
Confidence            3

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.92  E-value=2.2e-25  Score=239.32  Aligned_cols=155  Identities=29%  Similarity=0.493  Sum_probs=136.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE  548 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~  548 (649)
                      ..++|.+.++||+|+||.||+|+..        .+..||||++.... ....+++.+|++++.++ +||||+++++++.+
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3467889999999999999999863        23579999997543 34557899999999999 89999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLK-------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                      ++..++||||+++|+|.+++.....             ...+++.+++.|+.||++||+|||+.+   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence            9999999999999999999964321             245899999999999999999999987   999999999999


Q ss_pred             EcCCCceEEEecCCceeeCCC
Q 006347          616 LDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++.+||+|||+|+.+...
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~  244 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHI  244 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCC
T ss_pred             EcCCCcEEEcccCcccccccc
Confidence            999999999999999987544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=3e-25  Score=227.51  Aligned_cols=151  Identities=28%  Similarity=0.539  Sum_probs=134.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ..++|++.+.||+|+||.||++...++..||||++... ....+++.+|+.++.+++|+||+++++++.+.+..++||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            34678889999999999999999998889999999754 34567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++...  ...+++..+..++.|+++||.|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus       101 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          101 MANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD  172 (283)
T ss_dssp             CTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred             cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence            9999999999652  356899999999999999999999987   99999999999999999999999999987643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=2.5e-25  Score=229.11  Aligned_cols=149  Identities=27%  Similarity=0.467  Sum_probs=133.6

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||+|...+++.||||++....  ....+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4688899999999999999999889999999986432  23457889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++ +|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        82 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           82 LDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             CSE-EHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             cCC-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            975 89888854  2356899999999999999999999987   99999999999999999999999999987643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.92  E-value=1.5e-25  Score=248.97  Aligned_cols=153  Identities=31%  Similarity=0.537  Sum_probs=138.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ...+|++.++||+|+||.||+|... ++..||||.++.. ....++|.+|+.++.+++|||||+++++|.+.+..+||||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            4467888899999999999999987 4889999999754 3457889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++|+|.+++... ....+++..++.|+.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+...
T Consensus       297 ~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  371 (495)
T 1opk_A          297 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD  371 (495)
T ss_dssp             CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred             ccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence            99999999999643 2356899999999999999999999988   999999999999999999999999999987543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=4.3e-25  Score=247.25  Aligned_cols=153  Identities=29%  Similarity=0.406  Sum_probs=137.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|.+.+.||+|+||.||++... +|+.||||++.+.   .......+.+|+.++.+++|||||++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            356888999999999999999986 7899999999653   234567789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++... ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       263 mEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             ECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            9999999999999653 2345899999999999999999999987   99999999999999999999999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       339 ~  339 (576)
T 2acx_A          339 G  339 (576)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.92  E-value=1.7e-25  Score=245.86  Aligned_cols=155  Identities=30%  Similarity=0.515  Sum_probs=137.6

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      +.+...++|++.+.||+|+||.||+|...++..||||+++.. ....++|.+|+.++++++|||||++++++. .+..++
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l  259 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI  259 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence            334455778899999999999999999988899999999764 346789999999999999999999999986 667899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++... ....+++..++.++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus       260 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             EECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             EEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            99999999999999642 2235889999999999999999999987   9999999999999999999999999999874


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       336 ~  336 (454)
T 1qcf_A          336 D  336 (454)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.92  E-value=5.8e-26  Score=238.61  Aligned_cols=160  Identities=31%  Similarity=0.470  Sum_probs=137.6

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEecC------CcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCC  546 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~  546 (649)
                      +.+...++|.+.+.||+|+||.||+|....      ...||||.+.... ....+.+.+|+.++.++ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            344456789999999999999999998752      2479999997543 23567899999999999 899999999999


Q ss_pred             EeCCeEEEEEecCCCCChhhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          547 VEGEEKMLIYEYMPNRSLDALLFDPL-----------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       547 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                      .+.+..++||||+++|+|.+++....           ....+++..++.++.||++||+|||+.+   |+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence            99999999999999999999986421           1345899999999999999999999987   999999999999


Q ss_pred             EcCCCceEEEecCCceeeCCCC
Q 006347          616 LDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +++++.+||+|||+++.+....
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~  218 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDS  218 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCT
T ss_pred             ECCCCeEEECcccccccccccc
Confidence            9999999999999999775443

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=8.5e-26  Score=236.29  Aligned_cols=156  Identities=29%  Similarity=0.522  Sum_probs=123.0

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecC-C---cEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKD-G---QEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~-g---~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ...++|++.+.||+|+||.||+|.... +   ..||||.++..  .....+++.+|+.++++++||||+++++++.+.+.
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            344679999999999999999998763 2   27999998654  34456889999999999999999999999988776


Q ss_pred             E------EEEEecCCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          552 K------MLIYEYMPNRSLDALLFDPL---KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       552 ~------~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      .      ++||||+++|+|.+++....   ....+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence            5      99999999999999985321   1235899999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeCCC
Q 006347          623 KISDFGMAKIFGGN  636 (649)
Q Consensus       623 Ki~DFGla~~~~~~  636 (649)
                      ||+|||+|+.+...
T Consensus       177 kl~Dfg~a~~~~~~  190 (323)
T 3qup_A          177 CVADFGLSRKIYSG  190 (323)
T ss_dssp             EECCCCC-------
T ss_pred             EEeecccccccccc
Confidence            99999999987443

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.92  E-value=1.7e-25  Score=239.33  Aligned_cols=149  Identities=28%  Similarity=0.347  Sum_probs=124.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHH-HhcCCCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMV-ISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|++.+.||+|+||.||+++.. +++.||||++++..   ....+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            357999999999999999999987 58899999997543   2344566777776 567899999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+|+...
T Consensus       117 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          117 VLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            9999999999999853   356889999999999999999999988   9999999999999999999999999998743

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.92  E-value=9.6e-26  Score=234.91  Aligned_cols=151  Identities=24%  Similarity=0.410  Sum_probs=129.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe----
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE----  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----  551 (649)
                      .++|++.+.||+|+||.||+++.. +++.||||++....   ....+.+.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            367999999999999999999974 78999999997542   2334678999999999999999999999886553    


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+++++|.+++..   ...+++.++..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            3999999999999999953   346899999999999999999999987   9999999999999999999999999999


Q ss_pred             eeCCC
Q 006347          632 IFGGN  636 (649)
Q Consensus       632 ~~~~~  636 (649)
                      .+...
T Consensus       165 ~~~~~  169 (311)
T 3ork_A          165 AIADS  169 (311)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            87543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.92  E-value=5.4e-25  Score=242.54  Aligned_cols=150  Identities=28%  Similarity=0.533  Sum_probs=136.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+|+.. +|+.||||++....   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            57888999999999999999986 79999999996532   234568999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++.++..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        96 E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           96 EYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             ECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            99999999999953   456899999999999999999999987   999999999999999999999999999987543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=6.2e-25  Score=245.12  Aligned_cols=164  Identities=29%  Similarity=0.403  Sum_probs=141.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||+||+++.. +|+.||||++.+..   ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            56888899999999999999986 68999999996532   245678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            99999999999875422 456899999999999999999999988   99999999999999999999999999998754


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      ....  +....||+
T Consensus       342 ~~~~--~~~~~GT~  353 (543)
T 3c4z_A          342 GQTK--TKGYAGTP  353 (543)
T ss_dssp             TCCC--BCCCCSCT
T ss_pred             CCcc--cccccCCc
Confidence            4322  22346663

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=5.1e-25  Score=231.78  Aligned_cols=155  Identities=28%  Similarity=0.521  Sum_probs=135.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec--------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      .++|.+.+.||+|+||.||+|...        +++.||||++.... ....+++.+|+.++.++ +||||+++++++.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            467899999999999999999863        46789999997543 34567899999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLK-------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +..++||||+++|+|.+++.....             ...+++.+++.++.||++||+|||+.+   |+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence            999999999999999999975321             235899999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCCC
Q 006347          617 DEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +.++.+||+|||+++.+....
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~  211 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNID  211 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTS
T ss_pred             cCCCCEEEccccccccccccc
Confidence            999999999999999876543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.92  E-value=5e-25  Score=241.80  Aligned_cols=148  Identities=32%  Similarity=0.534  Sum_probs=133.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-eEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-EKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||+|... ++.||||+++...  ..++|.+|+.++.+++||||+++++++.+.+ ..+|||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            356888899999999999999987 7899999997543  5688999999999999999999999998776 78999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|+|.+++... ....+++..++.++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus       269 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          269 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             cCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            9999999999653 2334799999999999999999999988   9999999999999999999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.92  E-value=3.8e-25  Score=230.53  Aligned_cols=150  Identities=30%  Similarity=0.330  Sum_probs=129.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.++||+|+||+||+|... +++.||||++....  .....++..|+..+.++ +|+||+++++++.+++..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999987 79999999986532  23344566677666666 8999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+ +++|.+++...  ...+++..+..|+.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.....
T Consensus       137 e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             ECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             ecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            999 77998888542  356999999999999999999999987   999999999999999999999999999987543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=1.7e-25  Score=234.94  Aligned_cols=152  Identities=32%  Similarity=0.578  Sum_probs=128.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|++.+.||+|+||+||+|+.. +++    .||+|.+... .....++|.+|+.++.+++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            56888999999999999999865 344    4688888543 3356688999999999999999999999998765 789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+||+++|+|.+++...  ...+++..++.|+.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus        94 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            99999999999999652  456899999999999999999999987   9999999999999999999999999999876


Q ss_pred             CCCC
Q 006347          635 GNQD  638 (649)
Q Consensus       635 ~~~~  638 (649)
                      ....
T Consensus       169 ~~~~  172 (327)
T 3poz_A          169 AEEK  172 (327)
T ss_dssp             TTCC
T ss_pred             CCcc
Confidence            5443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=2.8e-25  Score=230.92  Aligned_cols=167  Identities=31%  Similarity=0.446  Sum_probs=140.9

Q ss_pred             HhcCcccceeeccCCcEEEEEEEe------cCCcEEEEEEeccccc-ccHHHHHHHHHHHhcC-CCCCccceEEEEEeCC
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGE  550 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~  550 (649)
                      ..++|++.+.||+|+||.||+|+.      .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++.+++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346789999999999999999985      2467899999975432 3457899999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCChhhhhcCCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLK---------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                      ..++||||+++|+|.+++.....               ...+++..++.++.|+++||+|||+.+   |+||||||+|||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence            99999999999999999964321               225899999999999999999999987   999999999999


Q ss_pred             EcCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          616 LDEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      +++++.+||+|||+++.+.............||
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  210 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLP  210 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEEC
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCc
Confidence            999999999999999987655443333333343

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=9.4e-25  Score=228.18  Aligned_cols=152  Identities=28%  Similarity=0.474  Sum_probs=120.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            457888999999999999999876 68999999986543 3345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPL---KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |++ ++|.+++....   ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 69999885321   2245899999999999999999999987   9999999999999999999999999999875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       160 ~  160 (317)
T 2pmi_A          160 I  160 (317)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.92  E-value=3.9e-25  Score=241.83  Aligned_cols=153  Identities=27%  Similarity=0.388  Sum_probs=134.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ..++|++.+.||+|+||.||++... +|+.+|+|.+....  ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            3467999999999999999999875 78999999986532  33456789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc---CCCceEEEecCCcee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKI  632 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~Ki~DFGla~~  632 (649)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++   +++.+||+|||+|+.
T Consensus        89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999998854   356899999999999999999999998   99999999999998   467899999999998


Q ss_pred             eCCCC
Q 006347          633 FGGNQ  637 (649)
Q Consensus       633 ~~~~~  637 (649)
                      +....
T Consensus       163 ~~~~~  167 (444)
T 3soa_A          163 VEGEQ  167 (444)
T ss_dssp             CCTTC
T ss_pred             ecCCC
Confidence            75543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=6.1e-26  Score=242.37  Aligned_cols=150  Identities=33%  Similarity=0.546  Sum_probs=131.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||.||+|+..      +++.||||+++.. ......++.+|+.++.+++||||+++++++.+....+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            57888999999999999999853      4678999999653 3445668999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC---ceEEEe
Q 006347          554 LIYEYMPNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL---NPKISD  626 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~Ki~D  626 (649)
                      +||||+++|+|.+++....    ....+++.+++.++.||++||+|||+.+   |+||||||+|||++.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence            9999999999999996421    2246899999999999999999999998   99999999999999544   599999


Q ss_pred             cCCceee
Q 006347          627 FGMAKIF  633 (649)
Q Consensus       627 FGla~~~  633 (649)
                      ||+|+.+
T Consensus       228 FG~a~~~  234 (367)
T 3l9p_A          228 FGMARDI  234 (367)
T ss_dssp             CHHHHHH
T ss_pred             Ccccccc
Confidence            9999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.92  E-value=3.2e-25  Score=233.87  Aligned_cols=149  Identities=28%  Similarity=0.477  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+|... +++.||||++.+..   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57899999999999999999974 78999999986431   233467899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+ +|+|.+++..   ...+++.++..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        89 E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           89 EYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             CCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             ECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            999 7899888853   356899999999999999999999988   999999999999999999999999999976543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.92  E-value=2.8e-25  Score=234.01  Aligned_cols=148  Identities=19%  Similarity=0.297  Sum_probs=126.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--------cccHHHHHHHHHHHhcCC---------CCCccce
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--------GQGLEEFMNEVMVISKLQ---------HRNLVRL  542 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~niv~l  542 (649)
                      .++|++.+.||+|+||+||+|+. +|+.||||++....        ....+.+.+|+.++++++         |+|||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35688889999999999999998 58999999997542        233478899999998885         8888888


Q ss_pred             EEEEE------------------------------eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHH
Q 006347          543 LGCCV------------------------------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRG  592 (649)
Q Consensus       543 ~g~~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g  592 (649)
                      .+.+.                              +.+..+|||||+++|++.+.+.+    ..+++..+..|+.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            87754                              26789999999999977666632    468999999999999999


Q ss_pred             HHHHH-hCCCCceEecCCCCCcEEEcCCC--------------------ceEEEecCCceeeCC
Q 006347          593 LLYLH-RDSRLRIIHRDLKASNILLDEEL--------------------NPKISDFGMAKIFGG  635 (649)
Q Consensus       593 L~yLH-~~~~~~iiHrDlkp~NILl~~~~--------------------~~Ki~DFGla~~~~~  635 (649)
                      |+||| +.+   |+||||||+|||++.++                    .+||+|||+|+.+..
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~  234 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD  234 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence            99999 887   99999999999999887                    899999999998753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.92  E-value=7.6e-25  Score=223.33  Aligned_cols=150  Identities=30%  Similarity=0.450  Sum_probs=135.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            357889999999999999999986 68999999986433 3445789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        86 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           86 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             ecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            9999999999853   346899999999999999999999987   99999999999999999999999999987643

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.92  E-value=1e-24  Score=226.66  Aligned_cols=149  Identities=26%  Similarity=0.424  Sum_probs=134.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||.||+|... +++.||||++.....  ...+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57899999999999999999986 589999999865432  235678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            9999999998853   356899999999999999999999988   99999999999999999999999999998754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.92  E-value=1.2e-24  Score=222.49  Aligned_cols=150  Identities=29%  Similarity=0.504  Sum_probs=135.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. +++.||||.+....   ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56888999999999999999974 78999999986432   233578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus        91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           91 EMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             ECCTTEEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             ecCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            99999999999964  2356899999999999999999999987   99999999999999999999999999998753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.92  E-value=7.2e-25  Score=230.25  Aligned_cols=149  Identities=22%  Similarity=0.310  Sum_probs=132.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||+|... +++.||||.+....  ..+++.+|+.++.++ +|+||+++++++.+++..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            57899999999999999999964 78999999986532  335788999999999 899999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc-----eEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN-----PKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~Ki~DFGla~~~  633 (649)
                      + +++|.+++...  ...+++..++.|+.|+++||+|||+.+   |+||||||+|||++.++.     +||+|||+|+.+
T Consensus        87 ~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           87 L-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             C-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             C-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            9 99999999642  457999999999999999999999987   999999999999999887     999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ....
T Consensus       161 ~~~~  164 (330)
T 2izr_A          161 IDPE  164 (330)
T ss_dssp             BCTT
T ss_pred             ecCC
Confidence            5443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.92  E-value=6.2e-25  Score=236.98  Aligned_cols=153  Identities=31%  Similarity=0.471  Sum_probs=135.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC--eEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE--EKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++.+.+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            56889999999999999999987 58999999997543 345678889999999999999999999998766  679999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE----cCCCceEEEecCCcee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL----DEELNPKISDFGMAKI  632 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~Ki~DFGla~~  632 (649)
                      ||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||+    +.++.+||+|||+|+.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            99999999999976444445999999999999999999999988   9999999999999    7788899999999998


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      +...
T Consensus       166 ~~~~  169 (396)
T 4eut_A          166 LEDD  169 (396)
T ss_dssp             CCCG
T ss_pred             ccCC
Confidence            7543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=1e-25  Score=235.50  Aligned_cols=163  Identities=31%  Similarity=0.497  Sum_probs=140.1

Q ss_pred             CCHHHHHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceE
Q 006347          471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLL  543 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~  543 (649)
                      +..++.....++|.+.+.||+|+||.||+|+..      +++.||||.+.... .....++.+|+.++.+++|+||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            444455566788999999999999999999864      36789999997543 23456799999999999999999999


Q ss_pred             EEEEeCCeEEEEEecCCCCChhhhhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          544 GCCVEGEEKMLIYEYMPNRSLDALLFDPL-------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       544 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +++.+++..++||||+++|+|.+++....       ....+++..++.++.||++||.|||+.+   |+||||||+|||+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence            99999999999999999999999986421       1245789999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCC
Q 006347          617 DEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++++.+||+|||+++.....
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~  191 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYET  191 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGG
T ss_pred             cCCCeEEECcCccccccccc
Confidence            99999999999999876443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=5.2e-25  Score=234.59  Aligned_cols=147  Identities=27%  Similarity=0.385  Sum_probs=131.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|.+.+.||+|+||.||++... +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            467999999999999999999987 78999999997533 3446789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc--eEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN--PKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--~Ki~DFGla~~~  633 (649)
                      +++|+|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.  +||+|||+|+..
T Consensus        98 ~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A           98 ASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSS  168 (361)
T ss_dssp             CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred             CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence            999999999853   346899999999999999999999988   999999999999987765  999999999854

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.92  E-value=8.6e-25  Score=226.13  Aligned_cols=152  Identities=31%  Similarity=0.580  Sum_probs=132.2

Q ss_pred             cCcccceeeccCCcEEEEEEEe-----cCCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~  552 (649)
                      +.|++.+.||+|+||.||++++     .+++.||||++... .....+.+.+|+.++.+++|+||+++++++.+.  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4588889999999999999984     36889999999743 234568899999999999999999999999876  568


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..  ....+++..++.++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       101 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            999999999999999954  2345899999999999999999999988   99999999999999999999999999998


Q ss_pred             eCCCC
Q 006347          633 FGGNQ  637 (649)
Q Consensus       633 ~~~~~  637 (649)
                      +....
T Consensus       176 ~~~~~  180 (302)
T 4e5w_A          176 IETDK  180 (302)
T ss_dssp             CCTTC
T ss_pred             ccCCC
Confidence            75543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.92  E-value=4.7e-25  Score=233.12  Aligned_cols=161  Identities=24%  Similarity=0.365  Sum_probs=132.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCC--CCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH--RNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||++...+++.||||++...  .....+.+.+|+.++.+++|  +||+++++++.+++..+||
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3568999999999999999999988999999998643  23445789999999999976  9999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      || +.+++|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||++ ++.+||+|||+|+.+..
T Consensus        88 ~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             Ee-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99 568899999954   456899999999999999999999987   99999999999997 57899999999998755


Q ss_pred             CCCccccCceeec
Q 006347          636 NQDQADTGRVVGT  648 (649)
Q Consensus       636 ~~~~~~~~~~~GT  648 (649)
                      ...........||
T Consensus       160 ~~~~~~~~~~~gt  172 (343)
T 3dbq_A          160 DTTSVVKDSQVGT  172 (343)
T ss_dssp             ----------CCC
T ss_pred             ccccccCCCCcCC
Confidence            4433333344555

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.92  E-value=2.5e-25  Score=233.28  Aligned_cols=162  Identities=27%  Similarity=0.462  Sum_probs=132.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|++.+.||+|+||.||+|... +++    .||+|.+.... ....+++.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            56888899999999999999865 444    38888875432 344567889999999999999999999986 566889


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++...  ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence            99999999999999652  346889999999999999999999998   9999999999999999999999999999876


Q ss_pred             CCCCccccCceeec
Q 006347          635 GNQDQADTGRVVGT  648 (649)
Q Consensus       635 ~~~~~~~~~~~~GT  648 (649)
                      ............||
T Consensus       167 ~~~~~~~~~~~~~~  180 (325)
T 3kex_A          167 PDDKQLLYSEAKTP  180 (325)
T ss_dssp             CCTTCCC-----CC
T ss_pred             cccccccccCCCCc
Confidence            54433333333443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=3.6e-25  Score=233.62  Aligned_cols=157  Identities=27%  Similarity=0.357  Sum_probs=134.2

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-----ccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-----SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ++....++|.+.+.||+|+||.||+|... +++.||||++...     .....+++.+|+.++.+++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            34556678999999999999999999975 6889999998643     23556789999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCC-------------------------------------CCCCCHHHHHHHHHHHHH
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLK-------------------------------------KERLDWRKRFNIIEGISR  591 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~  591 (649)
                      .+..++||||+++|+|.+++.....                                     ...+++..+..|+.||++
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            9999999999999999999842100                                     112356778889999999


Q ss_pred             HHHHHHhCCCCceEecCCCCCcEEEcCCC--ceEEEecCCceeeC
Q 006347          592 GLLYLHRDSRLRIIHRDLKASNILLDEEL--NPKISDFGMAKIFG  634 (649)
Q Consensus       592 gL~yLH~~~~~~iiHrDlkp~NILl~~~~--~~Ki~DFGla~~~~  634 (649)
                      ||+|||+.+   |+||||||+|||++.++  .+||+|||+|+.+.
T Consensus       180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~  221 (345)
T 3hko_A          180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY  221 (345)
T ss_dssp             HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred             HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeecccccccc
Confidence            999999987   99999999999998776  89999999999764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=4.6e-25  Score=226.67  Aligned_cols=148  Identities=30%  Similarity=0.514  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-C-------cEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-G-------QEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-g-------~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      ++|.+.+.||+|+||.||+|.... +       ..||+|.+........+.+.+|+.++.+++||||+++++++.+++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            568888999999999999998762 3       47999999776667778999999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc--------eEE
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN--------PKI  624 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--------~Ki  624 (649)
                      ++||||+++++|.+++...  ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.        +||
T Consensus        88 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             EEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence            9999999999999999642  334899999999999999999999988   999999999999998887        999


Q ss_pred             EecCCceee
Q 006347          625 SDFGMAKIF  633 (649)
Q Consensus       625 ~DFGla~~~  633 (649)
                      +|||+++..
T Consensus       163 ~Dfg~~~~~  171 (289)
T 4fvq_A          163 SDPGISITV  171 (289)
T ss_dssp             CCCCSCTTT
T ss_pred             ccCcccccc
Confidence            999999765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.92  E-value=7.6e-25  Score=232.23  Aligned_cols=149  Identities=29%  Similarity=0.428  Sum_probs=122.5

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ..++|++.+.||+|+||.||+|+.. +++.||||+++..  ...+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4467999999999999999999987 5789999999753  245678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla~~~~  634 (649)
                      |+++++|.+++..   ...+++.++..++.||++||.|||+.+   |+||||||+|||++.   ++.+||+|||+++...
T Consensus       129 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          129 LVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            9999999999953   356899999999999999999999987   999999999999975   8899999999999874


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       203 ~  203 (349)
T 2w4o_A          203 H  203 (349)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.92  E-value=1.7e-24  Score=223.02  Aligned_cols=150  Identities=31%  Similarity=0.436  Sum_probs=132.4

Q ss_pred             cccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      |.....||+|+||.||+|... +++.||||.+........+.+.+|+.++.+++||||+++++++.+.+..++||||+++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  103 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG  103 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence            444568999999999999975 6889999999776666678899999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCCceeeCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGla~~~~~  635 (649)
                      ++|.+++........+++..+..++.|+++||.|||+.+   |+||||||+||+++. ++.+||+|||+++.+..
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred             CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence            999999975434446778999999999999999999987   999999999999997 89999999999998754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.92  E-value=3.8e-25  Score=243.19  Aligned_cols=148  Identities=22%  Similarity=0.440  Sum_probs=122.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC-----CeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-----EEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  552 (649)
                      ++|++.+.||+|+||+||+|... +++.||||++...  .....+++.+|+.++.+++|+|||++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            67999999999999999999876 7899999999653  233567899999999999999999999999543     468


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+ +++|.+++..   ...+++..+..++.||++||+|||+.+   ||||||||+||||+.++.+||+|||+|+.
T Consensus       133 ~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence            9999998 5789999853   356899999999999999999999988   99999999999999999999999999998


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       206 ~~~  208 (458)
T 3rp9_A          206 VDY  208 (458)
T ss_dssp             TTS
T ss_pred             ccC
Confidence            753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.92  E-value=1.2e-24  Score=233.93  Aligned_cols=150  Identities=21%  Similarity=0.324  Sum_probs=135.3

Q ss_pred             hcCcccceeeccC--CcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQG--GFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G--~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|++.++||+|  +||.||+++.. +++.||||++....  ....+.+.+|+.++++++|||||++++++.+++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3578999999999  99999999987 78999999997543  3345778899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||||+++|+|.+++... ....+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       104 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            99999999999998643 2355899999999999999999999988   999999999999999999999999998765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.8e-25  Score=236.13  Aligned_cols=149  Identities=32%  Similarity=0.404  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEe----cCCcEEEEEEecccc----cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL----KDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~----~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      ++|++.+.||+|+||.||+++.    .+++.||||++++..    ....+.+.+|+.++.++ +|+||+++++++.+.+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5789999999999999999987    368999999986532    23456788899999999 79999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .+|||||+++++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            9999999999999999953   346899999999999999999999987   9999999999999999999999999999


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       208 ~~~~  211 (355)
T 1vzo_A          208 EFVA  211 (355)
T ss_dssp             ECCG
T ss_pred             eccc
Confidence            8743

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.92  E-value=7.7e-25  Score=239.02  Aligned_cols=150  Identities=24%  Similarity=0.459  Sum_probs=132.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC-----Ce
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-----EE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~  551 (649)
                      .++|.+.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++++++|+||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            368999999999999999999976 6889999999753  234567899999999999999999999999876     57


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||++ ++|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            899999986 699999953   356899999999999999999999998   9999999999999999999999999999


Q ss_pred             eeCCC
Q 006347          632 IFGGN  636 (649)
Q Consensus       632 ~~~~~  636 (649)
                      .+...
T Consensus       178 ~~~~~  182 (432)
T 3n9x_A          178 TINSE  182 (432)
T ss_dssp             EC---
T ss_pred             ccccc
Confidence            87543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=1.7e-24  Score=223.33  Aligned_cols=150  Identities=28%  Similarity=0.383  Sum_probs=134.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|.+.+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            357888999999999999999987 57899999986532   23457789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..   ...+++.++..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus        94 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            999999999998843   356899999999999999999999987   99999999999999999999999999998753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.92  E-value=3.2e-25  Score=243.48  Aligned_cols=152  Identities=34%  Similarity=0.567  Sum_probs=132.9

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ...++|++.++||+|+||.||+|...++..||||+++... ...++|.+|+.++++++||||+++++++.+ +..+||||
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence            3456788899999999999999999888889999997543 456789999999999999999999999876 67899999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++|+|.+++... ....+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       259 ~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          259 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             CCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             hhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            99999999999531 2245899999999999999999999988   99999999999999999999999999998754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.92  E-value=6.3e-25  Score=231.51  Aligned_cols=152  Identities=28%  Similarity=0.386  Sum_probs=134.8

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--------ccHHHHHHHHHHHhcCCCCCccceEEEEEeC
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEG  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~  549 (649)
                      ..++|++.+.||+|+||.||+|... +++.||||++.....        ...+.+.+|+.++.+++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            3467999999999999999999865 688999999875421        1345678899999999999999999999999


Q ss_pred             CeEEEEEecCCCC-ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          550 EEKMLIYEYMPNR-SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       550 ~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      +..++||||+..| +|.+++..   ...+++..+..|+.||++||+|||+.+   |+||||||+|||+++++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999777 99999854   346899999999999999999999987   9999999999999999999999999


Q ss_pred             CceeeCCC
Q 006347          629 MAKIFGGN  636 (649)
Q Consensus       629 la~~~~~~  636 (649)
                      +++.+...
T Consensus       176 ~a~~~~~~  183 (335)
T 3dls_A          176 SAAYLERG  183 (335)
T ss_dssp             TCEECCTT
T ss_pred             cceECCCC
Confidence            99987544

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.92  E-value=9.1e-25  Score=229.08  Aligned_cols=152  Identities=31%  Similarity=0.526  Sum_probs=135.6

Q ss_pred             cCcccceeeccCCcEEEEEEEe-----cCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~  553 (649)
                      ++|++.+.||+|+||.||++++     .+++.||||++........+.+.+|+.++.+++|+||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5688899999999999999984     3688999999987666667889999999999999999999999874  55689


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++...  ...+++..++.|+.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+
T Consensus       103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            999999999999999542  345899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ....
T Consensus       178 ~~~~  181 (327)
T 3lxl_A          178 PLDK  181 (327)
T ss_dssp             CTTC
T ss_pred             ccCC
Confidence            5443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.92  E-value=1.4e-24  Score=226.14  Aligned_cols=148  Identities=27%  Similarity=0.383  Sum_probs=131.0

Q ss_pred             cCcccc-eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLS-SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~-~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +.|.+. +.||+|+||.||++... +++.||||++........+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            457664 67999999999999965 7899999999776666678899999999985 79999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGla~~~~  634 (649)
                      |+++++|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.   +||+|||+++.+.
T Consensus        92 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           92 KMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             cCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            9999999999954   346899999999999999999999987   999999999999998776   9999999998764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.92  E-value=1.6e-24  Score=228.21  Aligned_cols=150  Identities=28%  Similarity=0.383  Sum_probs=135.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|.+.+.||+|+||.||++... +++.+|+|.+....   ....+.+.+|+.++.+++|+||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            357888999999999999999986 57899999986532   23567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       120 ~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          120 LELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             ECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            999999999999853   356899999999999999999999987   99999999999999999999999999998753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=1e-24  Score=237.02  Aligned_cols=151  Identities=26%  Similarity=0.422  Sum_probs=129.1

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--------cccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ...++|.+.+.||+|+||.||+|... +++.||||++.+..        ......+.+|+.++++++||||+++++++ +
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-D  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE-E
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE-e
Confidence            34578999999999999999999876 68999999986431        12234588999999999999999999997 4


Q ss_pred             CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEE
Q 006347          549 GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKIS  625 (649)
Q Consensus       549 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~  625 (649)
                      .+..++||||+++|+|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.+   ..+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence            5668999999999999998853   456899999999999999999999987   9999999999999754   459999


Q ss_pred             ecCCceeeCC
Q 006347          626 DFGMAKIFGG  635 (649)
Q Consensus       626 DFGla~~~~~  635 (649)
                      |||+|+.+..
T Consensus       285 DFG~a~~~~~  294 (419)
T 3i6u_A          285 DFGHSKILGE  294 (419)
T ss_dssp             CSSTTTSCC-
T ss_pred             ecccceecCC
Confidence            9999998754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.92  E-value=1.8e-24  Score=226.32  Aligned_cols=151  Identities=30%  Similarity=0.422  Sum_probs=135.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|.+.+.||+|+||.||++... +++.||||.+.....      ...+++.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            356889999999999999999976 689999999865322      1367899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecC
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFG  628 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFG  628 (649)
                      ++||||+++++|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||+++++    .+||+|||
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999954   356899999999999999999999987   99999999999999888    79999999


Q ss_pred             CceeeCCC
Q 006347          629 MAKIFGGN  636 (649)
Q Consensus       629 la~~~~~~  636 (649)
                      +++.+...
T Consensus       165 ~~~~~~~~  172 (321)
T 2a2a_A          165 LAHEIEDG  172 (321)
T ss_dssp             TCEECCTT
T ss_pred             cceecCcc
Confidence            99987543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.92  E-value=1.2e-24  Score=221.31  Aligned_cols=151  Identities=34%  Similarity=0.541  Sum_probs=125.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc----cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... ++.||||++....    ....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            57888999999999999999986 8899999986532    234578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC--------CCceEEEecC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE--------ELNPKISDFG  628 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~--------~~~~Ki~DFG  628 (649)
                      ||+++++|.+++.    ...+++..+..++.|+++||+|||+.+..+|+||||||+|||+++        ++.+||+|||
T Consensus        86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            9999999999984    346899999999999999999999987666999999999999986        6789999999


Q ss_pred             CceeeCCC
Q 006347          629 MAKIFGGN  636 (649)
Q Consensus       629 la~~~~~~  636 (649)
                      +++.+...
T Consensus       162 ~~~~~~~~  169 (271)
T 3dtc_A          162 LAREWHRT  169 (271)
T ss_dssp             C-------
T ss_pred             cccccccc
Confidence            99876543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.92  E-value=1.5e-24  Score=222.02  Aligned_cols=154  Identities=27%  Similarity=0.425  Sum_probs=134.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++...  ......++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467889999999999999999987 7899999998753  234567889999999999 899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC----------------
Q 006347          556 YEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE----------------  618 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~----------------  618 (649)
                      |||+++++|.+++..... ...+++.++..|+.||++||+|||+.+   |+||||||+|||++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            999999999999964211 256899999999999999999999987   999999999999984                


Q ss_pred             ---CCceEEEecCCceeeCCC
Q 006347          619 ---ELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       619 ---~~~~Ki~DFGla~~~~~~  636 (649)
                         ...+||+|||+++.....
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSP  187 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCS
T ss_pred             cCCceEEEEcccccccccCCc
Confidence               447999999999987543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.92  E-value=1.2e-24  Score=228.35  Aligned_cols=141  Identities=26%  Similarity=0.346  Sum_probs=125.8

Q ss_pred             eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          487 SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      +.||+|+||.||++... +++.||||++.+   .....+.+|+.++.++. ||||+++++++.+....++||||+++|+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            68999999999999986 689999999854   34567889999999997 99999999999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC---ceEEEecCCceeeCCC
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL---NPKISDFGMAKIFGGN  636 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~Ki~DFGla~~~~~~  636 (649)
                      .+++..   ...+++.++..|+.||++||+|||+.+   |+||||||+|||++.++   .+||+|||+++.....
T Consensus        94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            999954   356899999999999999999999987   99999999999998765   8999999999976443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.92  E-value=2.6e-25  Score=228.43  Aligned_cols=155  Identities=32%  Similarity=0.534  Sum_probs=139.0

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ...++|++.+.||+|+||.||+|... ++..||||.+... ....+++.+|+.++++++||||+++++++.+.+..++||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34567899999999999999999987 4889999999653 445688999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++.....
T Consensus        89 e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           89 EFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             ECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             EcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            999999999999652 3456899999999999999999999988   999999999999999999999999999987544


Q ss_pred             C
Q 006347          637 Q  637 (649)
Q Consensus       637 ~  637 (649)
                      .
T Consensus       165 ~  165 (288)
T 3kfa_A          165 T  165 (288)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.92  E-value=9.9e-25  Score=250.74  Aligned_cols=163  Identities=29%  Similarity=0.352  Sum_probs=140.0

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~  553 (649)
                      ..++|++.+.||+|+||.||+++.. +++.||||++++.   .....+.+..|..++..+ +|++|+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4467999999999999999999976 6889999999753   234567888999999988 7999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   ||||||||+||||++++++||+|||+|+..
T Consensus       419 lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            99999999999999953   356899999999999999999999987   999999999999999999999999999975


Q ss_pred             CCCCCccccCceeecC
Q 006347          634 GGNQDQADTGRVVGTL  649 (649)
Q Consensus       634 ~~~~~~~~~~~~~GT~  649 (649)
                      ......  +....||+
T Consensus       493 ~~~~~~--~~~~~GT~  506 (674)
T 3pfq_A          493 IWDGVT--TKTFCGTP  506 (674)
T ss_dssp             CCTTCC--BCCCCSCS
T ss_pred             ccCCcc--cccccCCC
Confidence            433322  23356663

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.92  E-value=3.7e-24  Score=221.70  Aligned_cols=149  Identities=30%  Similarity=0.470  Sum_probs=135.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      +.|+..+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++.+++|+||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            56888999999999999999875 68999999986543 34568899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +++++|.+++.    ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+...
T Consensus       102 ~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  172 (303)
T 3a7i_A          102 LGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  172 (303)
T ss_dssp             CTTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred             CCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence            99999999984    356899999999999999999999987   999999999999999999999999999987544

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=1.1e-24  Score=220.95  Aligned_cols=148  Identities=30%  Similarity=0.523  Sum_probs=135.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||++...+++.||||.+.... ...+++.+|+.++.+++||||+++++++.+++..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            5688889999999999999999888899999997643 345789999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+||++++++.+||+|||+++...
T Consensus        87 ~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           87 HGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             TCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred             CCcHHHHHhh--CcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccc
Confidence            9999999964  2346899999999999999999999988   9999999999999999999999999998764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=6.2e-25  Score=228.60  Aligned_cols=175  Identities=27%  Similarity=0.411  Sum_probs=143.7

Q ss_pred             CCHHHHHHHhcCcccceeeccCCcEEEEEEEe------cCCcEEEEEEeccccc-ccHHHHHHHHHHHhcC-CCCCccce
Q 006347          471 FQFEELATATNNFQLSSKLGQGGFGPVYWGRL------KDGQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRL  542 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~------~~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l  542 (649)
                      +...+.....++|++.+.||+|+||.||+|..      .+++.||||.+..... ...+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34455555668899999999999999999984      2468899999975432 3456899999999999 79999999


Q ss_pred             EEEEEeCC-eEEEEEecCCCCChhhhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecC
Q 006347          543 LGCCVEGE-EKMLIYEYMPNRSLDALLFDPLK-------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRD  608 (649)
Q Consensus       543 ~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD  608 (649)
                      ++++.+.+ ..++||||+++++|.+++.....             ...+++..+..++.|+++||.|||+.+   |+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence            99998765 48999999999999999975322             123789999999999999999999987   99999


Q ss_pred             CCCCcEEEcCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          609 LKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       609 lkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      |||+||++++++.+||+|||+++.+.............||
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t  213 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP  213 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEEC
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcc
Confidence            9999999999999999999999987554433333334444

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.91  E-value=1.4e-24  Score=230.61  Aligned_cols=164  Identities=26%  Similarity=0.327  Sum_probs=142.7

Q ss_pred             CCCCCCCHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-----CCCc
Q 006347          466 QDLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-----HRNL  539 (649)
Q Consensus       466 ~~~~~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-----H~ni  539 (649)
                      .+...+++.+.....++|.+.++||+|+||.||+|+.. +++.||||+++. .....+.+..|+.++.+++     |+||
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            34456667776777889999999999999999999985 688999999964 2345567888999999986     9999


Q ss_pred             cceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-
Q 006347          540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-  618 (649)
Q Consensus       540 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-  618 (649)
                      +++++++.+.+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+.+   |+||||||+|||+++ 
T Consensus        99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~  173 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDP  173 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCT
T ss_pred             ecccceeeECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccc
Confidence            99999999999999999999 99999999653 2345899999999999999999999988   999999999999976 


Q ss_pred             ------------------------CCceEEEecCCceeeCC
Q 006347          619 ------------------------ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       619 ------------------------~~~~Ki~DFGla~~~~~  635 (649)
                                              ++.+||+|||+|+....
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~  214 (360)
T 3llt_A          174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD  214 (360)
T ss_dssp             TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence                                    78999999999997643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.91  E-value=1.7e-24  Score=221.38  Aligned_cols=151  Identities=34%  Similarity=0.603  Sum_probs=134.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|++.+.||+|+||.||+|...++..||||.+... ....+.+.+|+.++.+++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            3578889999999999999999988889999999653 345688999999999999999999999976 55689999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++++|.+++... ....+++.++..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++.....
T Consensus        90 ~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             CCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence            999999999532 1236899999999999999999999988   999999999999999999999999999987543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=1.5e-24  Score=233.18  Aligned_cols=150  Identities=29%  Similarity=0.562  Sum_probs=124.8

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCC--e
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGE--E  551 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~  551 (649)
                      ...++|++.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++.++. |+||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            34578999999999999999999875 7899999998643  2345677889999999997 999999999998654  6


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||++ ++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            899999997 689998843    46899999999999999999999988   9999999999999999999999999999


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       158 ~~~~  161 (388)
T 3oz6_A          158 SFVN  161 (388)
T ss_dssp             ESSS
T ss_pred             cccc
Confidence            8743

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.91  E-value=1.1e-24  Score=234.70  Aligned_cols=160  Identities=24%  Similarity=0.362  Sum_probs=132.7

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCC--CCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||++...+++.||||++...  .....+++.+|+.++.+++  |+||+++++++.+.+..+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458999999999999999999888999999998643  2345678999999999996  599999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      | +.+++|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||++ ++.+||+|||+|+.+...
T Consensus       136 E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          136 E-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             E-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             e-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9 568999999964   346889999999999999999999987   99999999999996 578999999999987554


Q ss_pred             CCccccCceeec
Q 006347          637 QDQADTGRVVGT  648 (649)
Q Consensus       637 ~~~~~~~~~~GT  648 (649)
                      ..........||
T Consensus       208 ~~~~~~~~~~gt  219 (390)
T 2zmd_A          208 TTSVVKDSQVGA  219 (390)
T ss_dssp             ------CCSCCC
T ss_pred             CccccCCCCCcC
Confidence            433223334555

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=1.4e-24  Score=230.11  Aligned_cols=149  Identities=34%  Similarity=0.544  Sum_probs=131.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +.|+..+.||+|+||.||+|... +++.||||++....   ....+++.+|+.++.+++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            45888899999999999999964 78999999986432   233467899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||++ |+|.+++..  ....+++.++..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       134 e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             ECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            9997 688887743  2356899999999999999999999987   99999999999999999999999999987643

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.7e-24  Score=225.87  Aligned_cols=153  Identities=27%  Similarity=0.465  Sum_probs=129.5

Q ss_pred             HHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC--CCCCccceEEEEEeC----
Q 006347          476 LATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL--QHRNLVRLLGCCVEG----  549 (649)
Q Consensus       476 l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~----  549 (649)
                      .....++|++.+.||+|+||.||+|+.. ++.||||++...   ....+..|.+++..+  +|+||+++++++.+.    
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            3445578999999999999999999987 899999998542   334556666666655  899999999999988    


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCceEecCCCCCcEEEcCCCceEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS-----RLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      ...++||||+++|+|.+++..    ..+++..++.++.|++.||+|||+..     +.+|+||||||+|||++.++.+||
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence            788999999999999999943    35899999999999999999999871     123999999999999999999999


Q ss_pred             EecCCceeeCCC
Q 006347          625 SDFGMAKIFGGN  636 (649)
Q Consensus       625 ~DFGla~~~~~~  636 (649)
                      +|||+|+.+...
T Consensus       184 ~Dfg~a~~~~~~  195 (337)
T 3mdy_A          184 ADLGLAVKFISD  195 (337)
T ss_dssp             CCCTTCEECC--
T ss_pred             EeCCCceeeccc
Confidence            999999887543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.91  E-value=5.3e-25  Score=246.78  Aligned_cols=152  Identities=34%  Similarity=0.567  Sum_probs=135.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ...++|++.++||+|+||.||+|.+.++..||||+++... ...++|.+|+.++++++|+||+++++++.+ +..+||||
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence            3456788899999999999999999888899999997543 456789999999999999999999999866 67899999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++|+|.++|... ....+++.+++.|+.||++||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED  415 (535)
T ss_dssp             CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred             hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence            99999999999532 2245899999999999999999999988   99999999999999999999999999997643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.91  E-value=1.5e-24  Score=223.32  Aligned_cols=148  Identities=34%  Similarity=0.571  Sum_probs=123.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||.||+|+..  ..||||+++...  ....+.|.+|+.++++++|+||+++++++ .....++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            467999999999999999999875  359999986432  34567899999999999999999999965 5567899999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++..  ....+++.+++.++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       100 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A          100 WCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             CCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence            9999999999954  3456899999999999999999999988   99999999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.91  E-value=1.3e-24  Score=223.37  Aligned_cols=153  Identities=25%  Similarity=0.433  Sum_probs=133.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.++||+|+||.||++... ++..+|||++.... ....+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            56888999999999999999976 68899999986543 34568899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~~  634 (649)
                      +++|+|.+++.... ....+++..+..|+.|+++||+|||+.+   |+||||||+|||+   +.++.+||+|||+++.+.
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            99999999885421 2356899999999999999999999987   9999999999999   456789999999998765


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       179 ~~  180 (285)
T 3is5_A          179 SD  180 (285)
T ss_dssp             --
T ss_pred             Cc
Confidence            43

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.5e-24  Score=225.71  Aligned_cols=151  Identities=36%  Similarity=0.624  Sum_probs=134.3

Q ss_pred             cCcccceeeccCCcEEEEEEEe-----cCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC--eEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRL-----KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE--EKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~-----~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~  553 (649)
                      ++|++.+.||+|+||.||++..     .+++.||||++........+++.+|+.++.+++|+||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4688889999999999999984     368899999998766666788999999999999999999999987654  679


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++...  ...+++.+++.++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+
T Consensus       121 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            999999999999999642  345899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       196 ~~~  198 (326)
T 2w1i_A          196 PQD  198 (326)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.91  E-value=4.2e-24  Score=218.93  Aligned_cols=151  Identities=28%  Similarity=0.442  Sum_probs=134.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            468999999999999999999976 6899999998643  2334577889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGla~~~  633 (649)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.   +||+|||+++..
T Consensus        85 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            99999999888853   356899999999999999999999988   999999999999986655   999999999887


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       159 ~~~  161 (284)
T 3kk8_A          159 NDS  161 (284)
T ss_dssp             CSS
T ss_pred             ccC
Confidence            543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=9.2e-25  Score=227.36  Aligned_cols=158  Identities=30%  Similarity=0.543  Sum_probs=127.4

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec----CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      ++....++|.+.+.||+|+||.||+|...    .+..||||.++..  .....+++.+|+.++.+++||||+++++++.+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            33445567889999999999999999865    3458999998653  23445789999999999999999999999987


Q ss_pred             CCe-----EEEEEecCCCCChhhhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC
Q 006347          549 GEE-----KMLIYEYMPNRSLDALLFDP---LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       549 ~~~-----~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~  620 (649)
                      .+.     .++||||+++++|.+++...   .....+++..++.++.||++||.|||+.+   |+||||||+|||+++++
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTS
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCC
Confidence            654     49999999999999998432   23456899999999999999999999987   99999999999999999


Q ss_pred             ceEEEecCCceeeCC
Q 006347          621 NPKISDFGMAKIFGG  635 (649)
Q Consensus       621 ~~Ki~DFGla~~~~~  635 (649)
                      .+||+|||+++.+..
T Consensus       185 ~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          185 TVCVADFGLSKKIYS  199 (313)
T ss_dssp             CEEECSCSCC-----
T ss_pred             cEEEeecCcceeccc
Confidence            999999999987744

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.91  E-value=2.5e-24  Score=228.97  Aligned_cols=157  Identities=24%  Similarity=0.382  Sum_probs=133.2

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccc-----------cHHHHHHHHHHHhcCCCCCccc
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQ-----------GLEEFMNEVMVISKLQHRNLVR  541 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~  541 (649)
                      ..++....++|.+.+.||+|+||.||+|...+++.||||++......           ..+.+.+|+.++.+++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            45677888999999999999999999999888999999998643211           2378999999999999999999


Q ss_pred             eEEEEEeCC-----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          542 LLGCCVEGE-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       542 l~g~~~~~~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +++++...+     ..++||||++ |+|.+++..  ....+++..+..++.||++||.|||+.+   |+||||||+|||+
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~  167 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL  167 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence            999996533     5799999997 688888864  3456899999999999999999999987   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCC
Q 006347          617 DEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~  635 (649)
                      +.++.+||+|||+++....
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~  186 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTA  186 (362)
T ss_dssp             CTTCCEEECCTTC------
T ss_pred             cCCCCEEEEecCccccccc
Confidence            9999999999999986543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=1.5e-24  Score=222.35  Aligned_cols=150  Identities=25%  Similarity=0.425  Sum_probs=124.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|++.+.||+|+||.||+|....    +..||||++.... ....+.+.+|+.++.+++||||+++++++ ..+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence            3578889999999999999998752    4579999986533 34457899999999999999999999997 4567899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           93 IMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence            9999999999999964  2346899999999999999999999987   9999999999999999999999999999875


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       168 ~  168 (281)
T 1mp8_A          168 D  168 (281)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=5.5e-24  Score=236.91  Aligned_cols=152  Identities=30%  Similarity=0.508  Sum_probs=132.8

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-------------ccHHHHHHHHHHHhcCCCCCccceEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-------------QGLEEFMNEVMVISKLQHRNLVRLLG  544 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~niv~l~g  544 (649)
                      ..++|.+.++||+|+||+||+|... +++.||||++.....             ...+++.+|+.++.+++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3467999999999999999999976 678999999865321             34578999999999999999999999


Q ss_pred             EEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC---c
Q 006347          545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL---N  621 (649)
Q Consensus       545 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~  621 (649)
                      ++.+....++||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            99999999999999999999998853   356899999999999999999999987   99999999999998775   6


Q ss_pred             eEEEecCCceeeCCC
Q 006347          622 PKISDFGMAKIFGGN  636 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~  636 (649)
                      +||+|||+|+.+...
T Consensus       188 ~kl~Dfg~a~~~~~~  202 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKD  202 (504)
T ss_dssp             EEECCCTTCEECCTT
T ss_pred             EEEEECCCCEEcCCC
Confidence            999999999987554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=6.2e-24  Score=218.38  Aligned_cols=151  Identities=32%  Similarity=0.595  Sum_probs=132.5

Q ss_pred             cCcccce-eeccCCcEEEEEEEec---CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSS-KLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~-~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|.+.+ .||+|+||.||+|+..   ++..||||.++... ....+++.+|+.++.+++||||+++++++ +.+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4566665 8999999999999864   57889999997643 34567899999999999999999999999 56678999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        88 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            999999999999954  3456899999999999999999999988   99999999999999999999999999998854


Q ss_pred             CC
Q 006347          636 NQ  637 (649)
Q Consensus       636 ~~  637 (649)
                      ..
T Consensus       163 ~~  164 (287)
T 1u59_A          163 DD  164 (287)
T ss_dssp             CS
T ss_pred             Cc
Confidence            43

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.91  E-value=2.1e-24  Score=220.84  Aligned_cols=149  Identities=32%  Similarity=0.474  Sum_probs=132.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++....   ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            467889999999999999999876 57799999985432   23456789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++....
T Consensus        88 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            999999999999853   345899999999999999999999887   9999999999999999999999999987653

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.91  E-value=4.9e-24  Score=227.40  Aligned_cols=158  Identities=23%  Similarity=0.380  Sum_probs=138.9

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--------ccHHHHHHHHHHHhcC-CCCCccce
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--------QGLEEFMNEVMVISKL-QHRNLVRL  542 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l  542 (649)
                      ........++|.+.+.||+|+||.||+|... +|+.||||++.....        ...+.+.+|+.++.++ +||||+++
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            3344555678999999999999999999986 799999999865321        1245688999999999 79999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       543 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      ++++......++||||+++++|.+++.+   ...+++..+..++.||++||.|||+.+   |+||||||+|||+++++.+
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~i  239 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQI  239 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCE
Confidence            9999999999999999999999999953   356899999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeCCC
Q 006347          623 KISDFGMAKIFGGN  636 (649)
Q Consensus       623 Ki~DFGla~~~~~~  636 (649)
                      ||+|||+++.+...
T Consensus       240 kl~DfG~~~~~~~~  253 (365)
T 2y7j_A          240 RLSDFGFSCHLEPG  253 (365)
T ss_dssp             EECCCTTCEECCTT
T ss_pred             EEEecCcccccCCC
Confidence            99999999987543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.91  E-value=3.2e-24  Score=223.59  Aligned_cols=151  Identities=30%  Similarity=0.394  Sum_probs=132.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l  554 (649)
                      .++|++.+.||+|+||.||++... +++.||||++........+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            467999999999999999999974 789999999876556677889999999999999999999999973    347789


Q ss_pred             EEecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||||+++|+|.+++... .....+++.+++.++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            99999999999998642 12456899999999999999999999987   999999999999999999999999998875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.91  E-value=3.7e-24  Score=237.66  Aligned_cols=150  Identities=30%  Similarity=0.480  Sum_probs=129.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||+||+|... ++..||||++.+..  ......+.+|+.++++++|||||++++++.+....++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            46899999999999999999986 68899999987542  3446789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla~~~~  634 (649)
                      |+++|+|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||++.   ++.+||+|||+|+.+.
T Consensus       117 ~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          117 CYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            9999999988853   356899999999999999999999987   999999999999976   4559999999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       191 ~~  192 (494)
T 3lij_A          191 NQ  192 (494)
T ss_dssp             TT
T ss_pred             CC
Confidence            44

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.6e-24  Score=229.33  Aligned_cols=152  Identities=30%  Similarity=0.478  Sum_probs=127.4

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-----cHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-----GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ...++|.+.+.||+|+||.||+|... +|+.||||++......     ..+.+.+|+.++.+++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34568999999999999999999986 6899999998643221     23578899999999999999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+++ +|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+|+
T Consensus        87 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999975 89888854  2346888999999999999999999998   9999999999999999999999999999


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       161 ~~~~  164 (346)
T 1ua2_A          161 SFGS  164 (346)
T ss_dssp             TTTS
T ss_pred             eccC
Confidence            8743

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=9.3e-24  Score=220.67  Aligned_cols=147  Identities=32%  Similarity=0.532  Sum_probs=131.4

Q ss_pred             cccceeeccCCcEEEEEEEec-----CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEE
Q 006347          483 FQLSSKLGQGGFGPVYWGRLK-----DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKML  554 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~-----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l  554 (649)
                      |++.++||+|+||.||++.+.     +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            488899999999999998753     57899999997543 34467899999999999999999999999984  57899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++..    ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       113 v~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            9999999999999943    34899999999999999999999988   9999999999999999999999999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       186 ~~  187 (318)
T 3lxp_A          186 EG  187 (318)
T ss_dssp             TT
T ss_pred             cc
Confidence            44

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.91  E-value=2.9e-24  Score=221.60  Aligned_cols=149  Identities=33%  Similarity=0.539  Sum_probs=132.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe----------
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----------  548 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----------  548 (649)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|+.++.+++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            457889999999999999999975 789999999964 33456789999999999999999999999876          


Q ss_pred             ---CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          549 ---GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       549 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                         .+..++||||+++++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               3467899999999999999964  2345788999999999999999999987   9999999999999999999999


Q ss_pred             ecCCceeeC
Q 006347          626 DFGMAKIFG  634 (649)
Q Consensus       626 DFGla~~~~  634 (649)
                      |||+++.+.
T Consensus       159 dfg~~~~~~  167 (303)
T 1zy4_A          159 DFGLAKNVH  167 (303)
T ss_dssp             CCCCCSCTT
T ss_pred             eCcchhhcc
Confidence            999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=3.7e-24  Score=219.00  Aligned_cols=150  Identities=30%  Similarity=0.525  Sum_probs=132.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe---------
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE---------  548 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~---------  548 (649)
                      ..++|++.+.||+|+||.||+|... +++.||||++....    +.+.+|+.++.+++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            3456899999999999999999987 78999999986533    467789999999999999999999865         


Q ss_pred             -------CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          549 -------GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       549 -------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                             ....++||||+++++|.+++... ....+++..+..++.|+++||.|||+.+   |+||||||+|||+++++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence                   34579999999999999999642 2356899999999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeCCC
Q 006347          622 PKISDFGMAKIFGGN  636 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~  636 (649)
                      +||+|||+++.+...
T Consensus       161 ~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B          161 VKIGDFGLVTSLKND  175 (284)
T ss_dssp             EEECCCTTCEESSCC
T ss_pred             EEECcchhheecccc
Confidence            999999999987554

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.91  E-value=2.9e-24  Score=226.86  Aligned_cols=151  Identities=28%  Similarity=0.416  Sum_probs=134.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccccccc-----------------HHHHHHHHHHHhcCCCCCccce
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQG-----------------LEEFMNEVMVISKLQHRNLVRL  542 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~niv~l  542 (649)
                      .++|.+.+.||+|+||.||+|.. +++.||||.+.......                 .+.+.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46799999999999999999999 89999999986432111                 1889999999999999999999


Q ss_pred             EEEEEeCCeEEEEEecCCCCChhhh------hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEE
Q 006347          543 LGCCVEGEEKMLIYEYMPNRSLDAL------LFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNIL  615 (649)
Q Consensus       543 ~g~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NIL  615 (649)
                      ++++.+.+..++||||+++++|.++      +.. .....+++..+..++.|+++||+|||+ .+   |+||||||+|||
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil  184 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL  184 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence            9999999999999999999999998      532 125679999999999999999999998 76   999999999999


Q ss_pred             EcCCCceEEEecCCceeeCC
Q 006347          616 LDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       616 l~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++.++.+||+|||+++....
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~  204 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVD  204 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBT
T ss_pred             EcCCCcEEEecccccccccc
Confidence            99999999999999998644

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.91  E-value=5.9e-24  Score=220.86  Aligned_cols=152  Identities=30%  Similarity=0.523  Sum_probs=128.3

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-----cccHHHHHHHHHHHhcCC---CCCccceEEEEEeC
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-----GQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEG  549 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-----~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~  549 (649)
                      ..++|++.++||+|+||+||+|+.. +++.||||++....     ......+.+|+.++++++   ||||+++++++.+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4578999999999999999999975 78999999986432     122456778888777764   99999999999886


Q ss_pred             C-----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEE
Q 006347          550 E-----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKI  624 (649)
Q Consensus       550 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki  624 (649)
                      .     ..++||||++ ++|.+++... ....+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     4789999996 6999999653 2344899999999999999999999998   999999999999999999999


Q ss_pred             EecCCceeeCC
Q 006347          625 SDFGMAKIFGG  635 (649)
Q Consensus       625 ~DFGla~~~~~  635 (649)
                      +|||+|+.+..
T Consensus       162 ~Dfg~a~~~~~  172 (308)
T 3g33_A          162 ADFGLARIYSY  172 (308)
T ss_dssp             CSCSCTTTSTT
T ss_pred             eeCccccccCC
Confidence            99999997754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.91  E-value=5.6e-24  Score=217.85  Aligned_cols=149  Identities=30%  Similarity=0.438  Sum_probs=133.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|.+.+.||+|+||.||++... +++.||||.++....      ...+++.+|+.++.+++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46888999999999999999987 689999999865321      24678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecCC
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFGM  629 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFGl  629 (649)
                      +||||+++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+||++++++    .+||+|||+
T Consensus        85 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            99999999999999953   356899999999999999999999987   99999999999999877    899999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      ++.+..
T Consensus       159 ~~~~~~  164 (283)
T 3bhy_A          159 AHKIEA  164 (283)
T ss_dssp             CEECC-
T ss_pred             ceeccC
Confidence            998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.5e-24  Score=245.03  Aligned_cols=149  Identities=32%  Similarity=0.583  Sum_probs=129.7

Q ss_pred             Ccccce-eeccCCcEEEEEEEec---CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSS-KLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~-~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++.+.+ +||+|+||.||+|.+.   ++..||||+++... ....++|.+|+.++.+++|||||++++++.+ +..+|||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            344444 7999999999999875   46689999997643 3467889999999999999999999999876 5689999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..  ....+++..+..|+.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus       415 E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          415 EMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             ECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            99999999999964  3456899999999999999999999987   999999999999999999999999999987543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.91  E-value=5.2e-24  Score=225.18  Aligned_cols=147  Identities=27%  Similarity=0.427  Sum_probs=128.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||++... +++.||||.+++...    .+.+|++++.++ +||||+++++++.+++..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            457899999999999999999986 688999999975432    345688888888 79999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC----CceEEEecCCceee
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE----LNPKISDFGMAKIF  633 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~----~~~Ki~DFGla~~~  633 (649)
                      |+++|+|.+++..   ...+++.++..++.||+.||+|||+.+   |+||||||+|||+.++    ..+||+|||+++.+
T Consensus        97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            9999999999854   356899999999999999999999998   9999999999998543    35999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       171 ~~~  173 (342)
T 2qr7_A          171 RAE  173 (342)
T ss_dssp             BCT
T ss_pred             cCC
Confidence            544

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.91  E-value=2.3e-24  Score=226.29  Aligned_cols=151  Identities=32%  Similarity=0.581  Sum_probs=126.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|++.+.||+|+||.||+|... +++    .||+|.+... .....+++.+|+.++.+++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            57899999999999999999965 444    4688877543 3456788999999999999999999999998765 789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+||+++|+|.+++...  ...+++..++.|+.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            99999999999999642  456899999999999999999999988   9999999999999999999999999999875


Q ss_pred             CCC
Q 006347          635 GNQ  637 (649)
Q Consensus       635 ~~~  637 (649)
                      ...
T Consensus       169 ~~~  171 (327)
T 3lzb_A          169 AEE  171 (327)
T ss_dssp             ---
T ss_pred             Ccc
Confidence            443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.91  E-value=5.1e-24  Score=220.66  Aligned_cols=151  Identities=25%  Similarity=0.390  Sum_probs=129.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc----cccHHHHHHHHHHHhcCCCCCccceEEEEE--eCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQHRNLVRLLGCCV--EGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~--~~~~~  552 (649)
                      .++|.+.+.||+|+||.||++... +++.||||.+....    ....+.+.+|+.++.+++|+||+++++++.  +.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            368999999999999999999976 68899999996532    345678999999999999999999999985  44578


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||++++ |.+++... ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999877 76766542 3456899999999999999999999987   99999999999999999999999999998


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       159 ~~~  161 (305)
T 2wtk_C          159 LHP  161 (305)
T ss_dssp             CCT
T ss_pred             cCc
Confidence            754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.91  E-value=2.5e-24  Score=229.45  Aligned_cols=151  Identities=22%  Similarity=0.367  Sum_probs=126.6

Q ss_pred             HhcCcccceeeccCCcEEEEEEEecC------CcEEEEEEeccccccc-----------HHHHHHHHHHHhcCCCCCccc
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKASGQG-----------LEEFMNEVMVISKLQHRNLVR  541 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~  541 (649)
                      ..++|++.+.||+|+||.||+|....      ++.||||++.......           ...+..|+..+..++|+||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34689999999999999999998864      4789999986543211           123445666778889999999


Q ss_pred             eEEEEEeC----CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          542 LLGCCVEG----EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       542 l~g~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      +++++.+.    ...+|||||+ +++|.+++..  ....+++..++.|+.||++||+|||+.+   |+||||||+|||++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence            99999875    4579999999 9999999964  2356999999999999999999999987   99999999999999


Q ss_pred             --CCCceEEEecCCceeeCC
Q 006347          618 --EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       618 --~~~~~Ki~DFGla~~~~~  635 (649)
                        .++.+||+|||+|+.+..
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~  206 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCP  206 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSG
T ss_pred             cCCCCeEEEEECCcceeccc
Confidence              889999999999998754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.91  E-value=6.5e-24  Score=219.07  Aligned_cols=152  Identities=28%  Similarity=0.375  Sum_probs=135.5

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---------cccHHHHHHHHHHHhcCC-CCCccceEEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---------GQGLEEFMNEVMVISKLQ-HRNLVRLLGCCV  547 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~  547 (649)
                      ..++|++.+.||+|+||.||+|... +++.||||.++...         ....+.+.+|+.++.++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            3468999999999999999999986 68899999986432         123467889999999995 999999999999


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +.+..++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||++++++.+||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence            99999999999999999999953   356899999999999999999999988   999999999999999999999999


Q ss_pred             CCceeeCCC
Q 006347          628 GMAKIFGGN  636 (649)
Q Consensus       628 Gla~~~~~~  636 (649)
                      |+++.+...
T Consensus       169 g~~~~~~~~  177 (298)
T 1phk_A          169 GFSCQLDPG  177 (298)
T ss_dssp             TTCEECCTT
T ss_pred             cchhhcCCC
Confidence            999987543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=7.4e-24  Score=218.49  Aligned_cols=150  Identities=19%  Similarity=0.324  Sum_probs=132.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEe-cCCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||+|.. .+++.||||++...  ...+++.+|+.++.++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            35799999999999999999996 47899999998643  2345788999999999 79999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc-----eEEEecCCcee
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN-----PKISDFGMAKI  632 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~Ki~DFGla~~  632 (649)
                      |+ +++|.+++...  ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.     +||+|||+|+.
T Consensus        87 ~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 99999999642  345899999999999999999999987   999999999999987776     99999999998


Q ss_pred             eCCCC
Q 006347          633 FGGNQ  637 (649)
Q Consensus       633 ~~~~~  637 (649)
                      +....
T Consensus       161 ~~~~~  165 (298)
T 1csn_A          161 YRDPV  165 (298)
T ss_dssp             SBCTT
T ss_pred             ccccc
Confidence            76543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.91  E-value=6.1e-24  Score=223.72  Aligned_cols=154  Identities=26%  Similarity=0.410  Sum_probs=134.4

Q ss_pred             HHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhc--CCCCCccceEEEEEeCC
Q 006347          473 FEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISK--LQHRNLVRLLGCCVEGE  550 (649)
Q Consensus       473 ~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~  550 (649)
                      ...-....++|.+.+.||+|+||.||+|+.. ++.||||.+..   ...+.+.+|++++..  ++||||+++++++.+..
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            3333455578999999999999999999985 89999999854   345678889988887  78999999999999876


Q ss_pred             ----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecCCCCCcEEEcC
Q 006347          551 ----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH--------RDSRLRIIHRDLKASNILLDE  618 (649)
Q Consensus       551 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDlkp~NILl~~  618 (649)
                          ..++||||+++|+|.+++..    ..+++..++.++.|+++||+|||        +.+   |+||||||+|||+++
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKK  182 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECT
T ss_pred             CccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECC
Confidence                78999999999999999953    45899999999999999999999        555   999999999999999


Q ss_pred             CCceEEEecCCceeeCCCC
Q 006347          619 ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       619 ~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++.+||+|||+++......
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~  201 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSAT  201 (342)
T ss_dssp             TSCEEECCCTTCEEEETTT
T ss_pred             CCCEEEEECCCceeccccc
Confidence            9999999999999875543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.91  E-value=5.5e-24  Score=218.50  Aligned_cols=149  Identities=32%  Similarity=0.598  Sum_probs=129.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-------cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-------GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      ++|++.+.||+|+||.||+|+.. +++.||||++......       ..+++.+|+.++.+++||||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            67888999999999999999985 7899999998643221       1278999999999999999999999986554  


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc-----eEEEec
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN-----PKISDF  627 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~Ki~DF  627 (649)
                      ++||||+++++|.+++.+  ....+++..+..++.|+++||+|||+.+ .+|+||||||+|||++.++.     +||+||
T Consensus        97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            799999999999998865  3456899999999999999999999874 35999999999999988776     999999


Q ss_pred             CCceeeC
Q 006347          628 GMAKIFG  634 (649)
Q Consensus       628 Gla~~~~  634 (649)
                      |+|+...
T Consensus       174 g~~~~~~  180 (287)
T 4f0f_A          174 GLSQQSV  180 (287)
T ss_dssp             TTCBCCS
T ss_pred             Ccccccc
Confidence            9998653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.6e-24  Score=226.69  Aligned_cols=161  Identities=30%  Similarity=0.491  Sum_probs=137.0

Q ss_pred             CCCHHHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEE
Q 006347          470 LFQFEELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCV  547 (649)
Q Consensus       470 ~~~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~  547 (649)
                      .+++.++....++|++.+.||+|+||.||+|... +++.||||++... ....+++.+|+.++.++ +||||+++++++.
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            3444455566788999999999999999999975 7899999998653 34567899999999999 7999999999998


Q ss_pred             e------CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc
Q 006347          548 E------GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN  621 (649)
Q Consensus       548 ~------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~  621 (649)
                      .      .+..++||||+++++|.+++... ....+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCC
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCC
Confidence            7      46789999999999999999643 2356899999999999999999999987   999999999999999999


Q ss_pred             eEEEecCCceeeCC
Q 006347          622 PKISDFGMAKIFGG  635 (649)
Q Consensus       622 ~Ki~DFGla~~~~~  635 (649)
                      +||+|||+++.+..
T Consensus       168 ~kl~Dfg~~~~~~~  181 (326)
T 2x7f_A          168 VKLVDFGVSAQLDR  181 (326)
T ss_dssp             EEECCCTTTC----
T ss_pred             EEEeeCcCceecCc
Confidence            99999999987643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=1.5e-24  Score=227.80  Aligned_cols=152  Identities=30%  Similarity=0.471  Sum_probs=127.7

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ....++|++.++||+|+||+||++... +++.||||++.....  ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            334568999999999999999999865 789999999965432  23467889999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE-----cCCCceEEEecC
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL-----DEELNPKISDFG  628 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl-----~~~~~~Ki~DFG  628 (649)
                      +||||++ |+|.+++..   ...+++..+..|+.||++||+|||+.+   |+||||||+|||+     ++++.+||+|||
T Consensus       110 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             EEEECCS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             EEEecCC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            9999997 599999853   345899999999999999999999987   9999999999999     455669999999


Q ss_pred             CceeeCC
Q 006347          629 MAKIFGG  635 (649)
Q Consensus       629 la~~~~~  635 (649)
                      +|+.+..
T Consensus       183 ~a~~~~~  189 (329)
T 3gbz_A          183 LARAFGI  189 (329)
T ss_dssp             HHHHHC-
T ss_pred             CccccCC
Confidence            9987753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.91  E-value=3.3e-24  Score=225.29  Aligned_cols=149  Identities=29%  Similarity=0.494  Sum_probs=130.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc--ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG--QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||++... +++.||||++.....  ...+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            46888999999999999999986 589999999864332  234668899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++++|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       105 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          105 FVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             CCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             cCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            9999999988743   346899999999999999999999988   99999999999999999999999999987644

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=3.8e-24  Score=222.67  Aligned_cols=150  Identities=22%  Similarity=0.271  Sum_probs=131.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||++... +++.||||.+.....   ...+++.+|+.++.+++||||+++++++.+++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            468999999999999999999976 688999999975432   2347899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       113 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          113 MRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             EECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred             EEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence            999999999999953   346899999999999999999999987   99999999999999999999999999987654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.91  E-value=1.6e-24  Score=227.24  Aligned_cols=148  Identities=28%  Similarity=0.477  Sum_probs=128.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|.+.++||+|+||.||+|... +++.||||++...... ....+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57889999999999999999986 7899999998653322 223566899999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++ |+|.+++...  ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        82 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           82 LD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             CS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            97 5898888542  346899999999999999999999988   9999999999999999999999999998764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.91  E-value=5.8e-24  Score=223.17  Aligned_cols=163  Identities=30%  Similarity=0.422  Sum_probs=138.5

Q ss_pred             CCCHHHHHHHhcCcccc-eeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcC-CCCCccceEE
Q 006347          470 LFQFEELATATNNFQLS-SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKL-QHRNLVRLLG  544 (649)
Q Consensus       470 ~~~~~~l~~~~~~f~~~-~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g  544 (649)
                      ...+...+...+.|.+. +.||+|+||.||+|... +++.||||++....  .....++.+|+.++.++ +||||+++++
T Consensus        17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            33444455556677776 88999999999999977 68999999987532  33467899999999999 5799999999


Q ss_pred             EEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCc
Q 006347          545 CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELN  621 (649)
Q Consensus       545 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~  621 (649)
                      ++.+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||++.   ++.
T Consensus        97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~  172 (327)
T 3lm5_A           97 VYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD  172 (327)
T ss_dssp             EEECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred             EEEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence            999999999999999999999998542 3456899999999999999999999987   999999999999998   789


Q ss_pred             eEEEecCCceeeCCC
Q 006347          622 PKISDFGMAKIFGGN  636 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~  636 (649)
                      +||+|||+++.+...
T Consensus       173 ~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          173 IKIVDFGMSRKIGHA  187 (327)
T ss_dssp             EEECCGGGCEEC---
T ss_pred             EEEeeCccccccCCc
Confidence            999999999987543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.91  E-value=2.9e-24  Score=236.50  Aligned_cols=147  Identities=27%  Similarity=0.419  Sum_probs=125.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC------C
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------E  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  550 (649)
                      .++|++.+.||+|+||+||+|... +++.||||++...  .....+++.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            467999999999999999999876 6889999999754  334567889999999999999999999999754      3


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      +.+|||||++++ |.+.+.     ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+|
T Consensus       141 ~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence            579999999764 666663     23889999999999999999999998   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       212 ~~~~~  216 (464)
T 3ttj_A          212 RTAGT  216 (464)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            98754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.91  E-value=6.3e-24  Score=217.89  Aligned_cols=149  Identities=29%  Similarity=0.468  Sum_probs=133.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... +++.||||.+....   ....+.+.+|+.++.+++|+||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56888999999999999999986 57899999986432   234578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus        94 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           94 EFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            99999999999853   346899999999999999999999987   99999999999999999999999999987643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.91  E-value=5.3e-24  Score=221.27  Aligned_cols=152  Identities=22%  Similarity=0.442  Sum_probs=127.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... +++.||||++...   .....+++.+|+.++.+++|+||+++++++.+.+..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            56899999999999999999975 7899999998642   2345578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++.... ....+++..++.++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+..
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            9999999999985321 2456899999999999999999999987   99999999999999999999999999987754

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.91  E-value=2.6e-24  Score=222.51  Aligned_cols=148  Identities=28%  Similarity=0.520  Sum_probs=132.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            367899999999999999999987 5899999999776666778999999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +++++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  166 (302)
T 2j7t_A           98 CPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK  166 (302)
T ss_dssp             CTTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred             CCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence            999999999854  2356899999999999999999999987   99999999999999999999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.91  E-value=5.4e-24  Score=229.95  Aligned_cols=146  Identities=25%  Similarity=0.333  Sum_probs=124.6

Q ss_pred             cCcccc-eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhc-CCCCCccceEEEEEe----CCeEE
Q 006347          481 NNFQLS-SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISK-LQHRNLVRLLGCCVE----GEEKM  553 (649)
Q Consensus       481 ~~f~~~-~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~  553 (649)
                      ++|.+. +.||+|+||+||++... +++.||||+++.     ...+.+|+.++.+ .+|+||+++++++..    ....+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456665 68999999999999976 689999999853     2467788888754 489999999999876    55789


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCc
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMA  630 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla  630 (649)
                      |||||+++|+|.+++... ....+++.++..|+.||++||.|||+.+   |+||||||+|||++.   ++.+||+|||+|
T Consensus       136 lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccc
Confidence            999999999999999653 2346899999999999999999999987   999999999999998   789999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       212 ~~~~~  216 (400)
T 1nxk_A          212 KETTS  216 (400)
T ss_dssp             EECC-
T ss_pred             cccCC
Confidence            98653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.91  E-value=8.5e-24  Score=220.01  Aligned_cols=151  Identities=29%  Similarity=0.503  Sum_probs=131.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ..++|++.+.||+|+||.||+|... +|+.||||.+...  ...+++.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4467999999999999999999986 5899999998653  345789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++++|.+++..  ....+++..+..++.+++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.+...
T Consensus       105 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          105 YCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             CCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            9999999999852  2456899999999999999999999988   999999999999999999999999999987543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.91  E-value=9.2e-24  Score=223.67  Aligned_cols=148  Identities=28%  Similarity=0.557  Sum_probs=130.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--------  549 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------  549 (649)
                      ++|++.++||+|+||.||+|... +++.||||++....  ......+.+|+.++.+++||||+++++++.+.        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            57999999999999999999985 78999999986433  23456788999999999999999999999874        


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      +..++||||+++ +|.+.+...  ...+++.++..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence            468999999975 777777542  345899999999999999999999988   99999999999999999999999999


Q ss_pred             ceeeC
Q 006347          630 AKIFG  634 (649)
Q Consensus       630 a~~~~  634 (649)
                      |+.+.
T Consensus       171 a~~~~  175 (351)
T 3mi9_A          171 ARAFS  175 (351)
T ss_dssp             CEECC
T ss_pred             ccccc
Confidence            99875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=4.9e-24  Score=219.84  Aligned_cols=149  Identities=29%  Similarity=0.477  Sum_probs=129.9

Q ss_pred             CcccceeeccCCcEEEEEEEecC----CcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE-EEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK-MLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lV  555 (649)
                      .|...+.||+|+||.||+|...+    +..+|||.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            35566899999999999998642    23799999875433 4567899999999999999999999999877665 999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       102 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             EecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence            999999999999965  3456899999999999999999999987   99999999999999999999999999987643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.91  E-value=3.8e-24  Score=221.01  Aligned_cols=150  Identities=27%  Similarity=0.520  Sum_probs=130.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEe-CCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE-GEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~l  554 (649)
                      .+|++.+.||+|+||.||+|+..+    ...+|||.+.... ....+++.+|+.++++++||||+++++++.+ .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            457888999999999999998652    2368999987533 3455789999999999999999999999765 457799


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus       105 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             EEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             EEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccc
Confidence            9999999999999965  3456899999999999999999999987   9999999999999999999999999999774


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       180 ~  180 (298)
T 3f66_A          180 D  180 (298)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.91  E-value=5.5e-24  Score=221.45  Aligned_cols=147  Identities=29%  Similarity=0.472  Sum_probs=125.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEE------------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCV------------  547 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~------------  547 (649)
                      ++|.+.+.||+|+||.||+|... +++.||||++........+++.+|+.++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            57889999999999999999987 58999999997666667788999999999999999999999873            


Q ss_pred             --eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEE
Q 006347          548 --EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKI  624 (649)
Q Consensus       548 --~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki  624 (649)
                        +....++||||++ |+|.+++.    ...+++..+..++.|+++||+|||+.+   |+||||||+|||++ +++.+||
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEE
T ss_pred             ccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEE
Confidence              4467899999997 69999984    356899999999999999999999987   99999999999997 5779999


Q ss_pred             EecCCceeeCC
Q 006347          625 SDFGMAKIFGG  635 (649)
Q Consensus       625 ~DFGla~~~~~  635 (649)
                      +|||+++.+..
T Consensus       163 ~Dfg~~~~~~~  173 (320)
T 2i6l_A          163 GDFGLARIMDP  173 (320)
T ss_dssp             CCCTTCBCC--
T ss_pred             ccCccccccCC
Confidence            99999998743

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3.7e-24  Score=225.29  Aligned_cols=151  Identities=32%  Similarity=0.556  Sum_probs=128.5

Q ss_pred             cCcccceeeccCCcEEEEEEEecC-----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD-----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~-----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ++|+..+.||+|+||.||+|....     +..||||.++... .....++.+|+.++.+++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            457778999999999999998752     2469999997542 3345679999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++..  ....+++..++.++.||++||.|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       124 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          124 ITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            9999999999999964  2356899999999999999999999987   9999999999999999999999999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       199 ~~  200 (333)
T 1mqb_A          199 DD  200 (333)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.9e-24  Score=229.88  Aligned_cols=149  Identities=28%  Similarity=0.544  Sum_probs=123.3

Q ss_pred             CcccceeeccCCcEEEEEEEec--CC--cEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeC-CeEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK--DG--QEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-EEKMLI  555 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~--~g--~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV  555 (649)
                      .|.+.+.||+|+||.||+|+..  ++  ..||||.++... ....++|.+|+.++++++||||+++++++.+. +..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4667789999999999999864  22  468999986533 34567899999999999999999999998654 578999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++..  ....+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       170 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             EECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccc
Confidence            999999999999964  3345889999999999999999999987   99999999999999999999999999997643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.91  E-value=5.6e-24  Score=217.06  Aligned_cols=149  Identities=26%  Similarity=0.497  Sum_probs=135.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.+....   ....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            57889999999999999999987 78999999986432   234578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus        91 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           91 EYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             eccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            99999999999953   345899999999999999999999988   99999999999999999999999999988754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.90  E-value=7.9e-24  Score=221.91  Aligned_cols=150  Identities=34%  Similarity=0.585  Sum_probs=130.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcE--EEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQE--IAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~--vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.+.||+|+||.||+|... ++..  +|||.+... .....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            46888899999999999999876 5554  499988643 234556799999999999 899999999999999999999


Q ss_pred             EecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          556 YEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      |||+++++|.+++....             ....+++..++.++.||++||+|||+.+   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999997532             2346899999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceee
Q 006347          623 KISDFGMAKIF  633 (649)
Q Consensus       623 Ki~DFGla~~~  633 (649)
                      ||+|||+++..
T Consensus       182 kL~Dfg~~~~~  192 (327)
T 1fvr_A          182 KIADFGLSRGQ  192 (327)
T ss_dssp             EECCTTCEESS
T ss_pred             EEcccCcCccc
Confidence            99999999853

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.90  E-value=3.2e-24  Score=223.09  Aligned_cols=149  Identities=28%  Similarity=0.455  Sum_probs=126.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||.||+++.. ++.||||++..  ....+.|.+|+.++.+++||||+++++++.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            46888899999999999999986 78999999864  345678999999999999999999999876  45799999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc-eEEEecCCceeeC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN-PKISDFGMAKIFG  634 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-~Ki~DFGla~~~~  634 (649)
                      +++|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+|||+++++. +||+|||+++.+.
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            9999999976544446889999999999999999999943334999999999999998876 7999999998764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.90  E-value=1.5e-23  Score=219.79  Aligned_cols=144  Identities=24%  Similarity=0.409  Sum_probs=129.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEe--CCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVE--GEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... +++.||||+++.   ...+.+.+|+.++.+++ |+||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            56889999999999999999864 789999999864   34578999999999997 9999999999998  56789999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|.+++.      .+++.++..++.||++||+|||+.+   |+||||||+|||++.++ .+||+|||+|+.+..
T Consensus       113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999983      3789999999999999999999988   99999999999999776 899999999998754


Q ss_pred             C
Q 006347          636 N  636 (649)
Q Consensus       636 ~  636 (649)
                      .
T Consensus       184 ~  184 (330)
T 3nsz_A          184 G  184 (330)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.90  E-value=3.7e-24  Score=236.97  Aligned_cols=151  Identities=30%  Similarity=0.501  Sum_probs=135.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .++|++.+.||+|+||.||++... +++.||||++.+..   ....+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            356888999999999999999986 78999999986432   34568899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCcee
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKI  632 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~  632 (649)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||+|+.
T Consensus       105 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          105 GEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             ECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            999999999999854   356899999999999999999999988   9999999999999   5678999999999998


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      +...
T Consensus       179 ~~~~  182 (484)
T 3nyv_A          179 FEAS  182 (484)
T ss_dssp             BCCC
T ss_pred             cccc
Confidence            7544

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.90  E-value=1e-23  Score=221.52  Aligned_cols=147  Identities=35%  Similarity=0.590  Sum_probs=122.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHH--HhcCCCCCccceEEEEEe-----CCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMV--ISKLQHRNLVRLLGCCVE-----GEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~--l~~l~H~niv~l~g~~~~-----~~~~~  553 (649)
                      ++|++.+.||+|+||.||+|+. +++.||||++...   ..+.+..|.++  +..++|+||+++++.+..     ....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            5788999999999999999987 4899999998643   33455555555  445899999999987653     22568


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCceEecCCCCCcEEEcCCCceEEEec
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS------RLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +||||+++|+|.+++..    ...++..+..|+.||++||+|||+..      +.+|+||||||+|||++.++.+||+||
T Consensus        89 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            99999999999999943    34589999999999999999999881      113999999999999999999999999


Q ss_pred             CCceeeCC
Q 006347          628 GMAKIFGG  635 (649)
Q Consensus       628 Gla~~~~~  635 (649)
                      |+|+.+..
T Consensus       165 G~a~~~~~  172 (336)
T 3g2f_A          165 GLSMRLTG  172 (336)
T ss_dssp             TTCEECSS
T ss_pred             cceeeccc
Confidence            99998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.90  E-value=1.2e-23  Score=220.12  Aligned_cols=149  Identities=27%  Similarity=0.413  Sum_probs=127.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--------cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~  550 (649)
                      .++|.+.+.||+|+||.||+|... +++.||||.+....        ......+.+|+.++.+++||||+++++++...+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            457999999999999999999976 68899999986432        123356889999999999999999999987654


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEec
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDF  627 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DF  627 (649)
                       .++||||+++++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++.++.   +||+||
T Consensus        89 -~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df  161 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF  161 (322)
T ss_dssp             -EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred             -eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence             8999999999999999853   456899999999999999999999987   999999999999987654   999999


Q ss_pred             CCceeeCC
Q 006347          628 GMAKIFGG  635 (649)
Q Consensus       628 Gla~~~~~  635 (649)
                      |+++.+..
T Consensus       162 g~~~~~~~  169 (322)
T 2ycf_A          162 GHSKILGE  169 (322)
T ss_dssp             TTCEECCC
T ss_pred             ccceeccc
Confidence            99998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.90  E-value=4.8e-24  Score=219.66  Aligned_cols=151  Identities=30%  Similarity=0.510  Sum_probs=130.9

Q ss_pred             hcCcccce-eeccCCcEEEEEEEec---CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          480 TNNFQLSS-KLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       480 ~~~f~~~~-~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      .++|.+.+ .||+|+||.||+|...   .++.||||.++...  ....+++.+|+.++.+++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35677777 9999999999999643   46789999997543  23367899999999999999999999999 677889


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++..   ...+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+
T Consensus        94 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            99999999999999954   345899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ....
T Consensus       168 ~~~~  171 (291)
T 1xbb_A          168 RADE  171 (291)
T ss_dssp             CTTC
T ss_pred             ccCC
Confidence            5443

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.90  E-value=4.4e-24  Score=226.92  Aligned_cols=147  Identities=27%  Similarity=0.369  Sum_probs=133.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            46888999999999999999987 68999999987542 34457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +++++|.+++..   ...+++..+..++.++++||+|||+. +   |+||||||+|||++.++.+||+|||+++.+
T Consensus       113 ~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          113 MDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            999999999953   34689999999999999999999985 6   999999999999999999999999999765

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.90  E-value=2e-24  Score=223.21  Aligned_cols=154  Identities=27%  Similarity=0.448  Sum_probs=120.7

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..++|.+.+.||+|+||.||++... +++.||||++.... ....+++.+|+.++.+++||||+++++++.+.+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            3578999999999999999999865 68899999886432 344678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          557 EYMPNRSLDALLFD-----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       557 Ey~~~gsL~~~l~~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      ||+++++|.+++..     ......+++..+..++.||++||.|||+.+   |+||||||+||++++++.+||+|||+++
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            99999999999853     112456899999999999999999999987   9999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       170 ~~~~  173 (303)
T 2vwi_A          170 FLAT  173 (303)
T ss_dssp             HCC-
T ss_pred             eecc
Confidence            7643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=3.1e-24  Score=225.09  Aligned_cols=157  Identities=28%  Similarity=0.378  Sum_probs=135.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEe-------
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVE-------  548 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~-------  548 (649)
                      ....+|++.+.||+|+||.||++... +++.||||++........+.+.+|+.++.++. ||||+++++++..       
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            34457899999999999999999975 68999999987665566788999999999996 9999999999953       


Q ss_pred             -CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          549 -GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       549 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                       ....++||||++ |+|.+++........+++.+++.|+.||+.||+|||+.+ .+|+||||||+|||+++++.+||+||
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence             334789999995 799998864334456999999999999999999999864 35999999999999999999999999


Q ss_pred             CCceeeCCC
Q 006347          628 GMAKIFGGN  636 (649)
Q Consensus       628 Gla~~~~~~  636 (649)
                      |+++.+...
T Consensus       183 g~~~~~~~~  191 (337)
T 3ll6_A          183 GSATTISHY  191 (337)
T ss_dssp             TTCBCCSSC
T ss_pred             ccceecccc
Confidence            999987543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.90  E-value=5.6e-24  Score=220.62  Aligned_cols=149  Identities=26%  Similarity=0.434  Sum_probs=131.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      .++|.+.+.||+|+||.||+++.. +++.||||.+........+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            357889999999999999999976 7899999999765544567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceeeC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG  634 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~~  634 (649)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||++   ++++.+||+|||+++...
T Consensus        88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            999999999853   346899999999999999999999987   9999999999999   788999999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.90  E-value=4.4e-24  Score=236.59  Aligned_cols=151  Identities=30%  Similarity=0.518  Sum_probs=134.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .++|++.+.||+|+||+||++... +++.||||++.+.  .....+.+.+|+.++.+++||||+++++++.+....++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            357999999999999999999986 7899999998643  2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc---CCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+|||++   .++.+||+|||+|+.+
T Consensus       101 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A          101 ELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred             EcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence            99999999988853   356899999999999999999999988   99999999999995   4567999999999877


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       175 ~~~  177 (486)
T 3mwu_A          175 QQN  177 (486)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=1e-23  Score=226.29  Aligned_cols=152  Identities=25%  Similarity=0.357  Sum_probs=125.9

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC------
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------  549 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------  549 (649)
                      ....++|++.+.||+|+||.||+|... +++.||||++....    +...+|+.++++++|+||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            455678999999999999999999875 78999999986432    2234799999999999999999998543      


Q ss_pred             --------------------------------CeEEEEEecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHH
Q 006347          550 --------------------------------EEKMLIYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYL  596 (649)
Q Consensus       550 --------------------------------~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yL  596 (649)
                                                      ...++||||++ ++|.+.+... .....+++..+..++.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                            33789999998 5887777531 1345689999999999999999999


Q ss_pred             HhCCCCceEecCCCCCcEEEc-CCCceEEEecCCceeeCCC
Q 006347          597 HRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       597 H~~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+.+   |+||||||+|||++ +++.+||+|||+|+.+...
T Consensus       158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  195 (383)
T 3eb0_A          158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS  195 (383)
T ss_dssp             HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCC
Confidence            9987   99999999999998 6899999999999987543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=6.6e-24  Score=226.59  Aligned_cols=148  Identities=27%  Similarity=0.454  Sum_probs=125.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  550 (649)
                      .++|++.+.||+|+||.||+|... +|+.||||++...  .....+++.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            367999999999999999999975 7899999999643  2334578899999999999999999999998763      


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..++||||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            459999999 8899999853    46899999999999999999999988   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       176 ~~~~~  180 (367)
T 1cm8_A          176 RQADS  180 (367)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            98653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=2.3e-24  Score=225.97  Aligned_cols=152  Identities=33%  Similarity=0.534  Sum_probs=129.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|++.+.||+|+||.||+|+..      +++.||||.+... ......++.+|+.++.+++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            357889999999999999999842      5778999999643 334567899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEE
Q 006347          553 MLIYEYMPNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKIS  625 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~  625 (649)
                      ++||||+++++|.+++....    ....+++..++.++.|+++||.|||+.+   |+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            99999999999999996532    1245899999999999999999999987   999999999999994   4569999


Q ss_pred             ecCCceeeC
Q 006347          626 DFGMAKIFG  634 (649)
Q Consensus       626 DFGla~~~~  634 (649)
                      |||+++.+.
T Consensus       186 Dfg~~~~~~  194 (327)
T 2yfx_A          186 DFGMARDIY  194 (327)
T ss_dssp             CCHHHHHHH
T ss_pred             ccccccccc
Confidence            999998653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1e-23  Score=224.71  Aligned_cols=149  Identities=25%  Similarity=0.422  Sum_probs=131.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-----eE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-----EK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~  552 (649)
                      .++|++.+.||+|+||.||++... +++.||||++.... ....+.+.+|+.++.+++||||+++++++....     ..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            357999999999999999999876 68899999997533 234578999999999999999999999997653     68


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||++ ++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       106 ~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            99999997 599998843    45899999999999999999999988   99999999999999999999999999998


Q ss_pred             eCCC
Q 006347          633 FGGN  636 (649)
Q Consensus       633 ~~~~  636 (649)
                      ....
T Consensus       178 ~~~~  181 (364)
T 3qyz_A          178 ADPD  181 (364)
T ss_dssp             CCGG
T ss_pred             cCCC
Confidence            7543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.90  E-value=1.2e-23  Score=217.17  Aligned_cols=150  Identities=28%  Similarity=0.506  Sum_probs=131.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||+|... +++.||||++....  ....+.+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57889999999999999999986 68999999986532  2345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |++ ++|.+++... ....+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        83 ~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            997 6999998643 2345889999999999999999999987   99999999999999999999999999987653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.90  E-value=1.3e-24  Score=232.75  Aligned_cols=151  Identities=16%  Similarity=0.215  Sum_probs=124.6

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHH---HHHhcCCCCCccceE-------EE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEV---MVISKLQHRNLVRLL-------GC  545 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~  545 (649)
                      .++|.+.+.||+|+||+||+|+.. +|+.||||++...   .....+.+.+|+   .++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            467888899999999999999974 6899999999642   334567899999   556666899999998       66


Q ss_pred             EEeCCe-----------------EEEEEecCCCCChhhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 006347          546 CVEGEE-----------------KMLIYEYMPNRSLDALLFDPL----KKERLDWRKRFNIIEGISRGLLYLHRDSRLRI  604 (649)
Q Consensus       546 ~~~~~~-----------------~~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  604 (649)
                      +.+.+.                 .+|||||+ +|+|.+++....    ....+++..++.|+.||++||+|||+.+   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            665532                 78999999 689999996421    1123446888999999999999999988   9


Q ss_pred             EecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          605 IHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       605 iHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      +||||||+|||++.++.+||+|||+|+..+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~  257 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  257 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecC
Confidence            999999999999999999999999999743

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=4.7e-24  Score=243.45  Aligned_cols=143  Identities=31%  Similarity=0.512  Sum_probs=126.4

Q ss_pred             eeeccCCcEEEEEEEec---CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ++||+|+||.||+|.+.   .++.||||+++...  ....++|.+|+.++.+++|||||++++++. .+..+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            47999999999999653   46789999997543  234688999999999999999999999986 4568899999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+|.+++..   ...+++..+..|+.||+.||+|||+.+   ||||||||+|||+++++.+||+|||+|+.+...
T Consensus       454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~  522 (635)
T 4fl3_A          454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  522 (635)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred             CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence            999999953   356899999999999999999999988   999999999999999999999999999987543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.90  E-value=1.6e-23  Score=215.44  Aligned_cols=150  Identities=27%  Similarity=0.389  Sum_probs=130.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l  554 (649)
                      .|.+.+.||+|+||.||+|... ++..||+|.+...  .....+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            4677789999999999999876 6889999998643  23456789999999999999999999999876    356899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~  633 (649)
                      ||||+++++|.+++..   ...+++..+..++.|+++||.|||+.+ .+|+||||||+|||++ +++.+||+|||+++..
T Consensus       107 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            9999999999999953   356899999999999999999999874 3599999999999998 7899999999999865


Q ss_pred             CC
Q 006347          634 GG  635 (649)
Q Consensus       634 ~~  635 (649)
                      ..
T Consensus       183 ~~  184 (290)
T 1t4h_A          183 RA  184 (290)
T ss_dssp             CT
T ss_pred             cc
Confidence            43

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=2.1e-23  Score=214.83  Aligned_cols=143  Identities=10%  Similarity=0.069  Sum_probs=127.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|... +++.||||.+.....   ...++|.+|+.++.+++|+||+++++++.+++..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            67999999999999999999986 589999999975432   33478999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      ||+++++|.+++..    . ....+..+|+.|+++||+|||+.+   |+||||||+|||+++++.+||+++|...
T Consensus       111 e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~  177 (286)
T 3uqc_A          111 EWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMP  177 (286)
T ss_dssp             ECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred             EecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccC
Confidence            99999999999943    2 355678899999999999999998   9999999999999999999999887643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=8.1e-24  Score=214.79  Aligned_cols=150  Identities=24%  Similarity=0.406  Sum_probs=132.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC--CeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--EEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. ++.||||++....  ....++|.+|+.++.+++||||+++++++.+.  +..++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            46888899999999999999986 8899999987542  34457899999999999999999999999887  6789999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ||+++|+|.+++... ....+++..+..++.|+++||+|||+.+ .+|+||||||+|||+++++.+||+|||++...
T Consensus        89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeee
Confidence            999999999999753 3346899999999999999999999864 45999999999999999999999999987654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.90  E-value=7.7e-24  Score=223.95  Aligned_cols=148  Identities=19%  Similarity=0.326  Sum_probs=123.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccccc-----------cHHHHHHHHHHHhcCCCCCccceEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKASGQ-----------GLEEFMNEVMVISKLQHRNLVRLLGC  545 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~l~g~  545 (649)
                      ++|.+.+.||+|+||.||+|...    ++..+|||++......           ..+.+.+|+..+..++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            57999999999999999999986    5678999998654321           22346788899999999999999999


Q ss_pred             EEe----CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-
Q 006347          546 CVE----GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-  620 (649)
Q Consensus       546 ~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-  620 (649)
                      +.+    ....++||||+ +++|.+++..   ...+++.+++.|+.||++||+|||+.+   |+||||||+|||++.++ 
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence            998    77899999999 9999999954   237899999999999999999999987   99999999999999887 


Q ss_pred             -ceEEEecCCceeeCC
Q 006347          621 -NPKISDFGMAKIFGG  635 (649)
Q Consensus       621 -~~Ki~DFGla~~~~~  635 (649)
                       .+||+|||+|+.+..
T Consensus       190 ~~~kL~Dfg~a~~~~~  205 (345)
T 2v62_A          190 DQVYLADYGLSYRYCP  205 (345)
T ss_dssp             TSEEECCCTTCEESSG
T ss_pred             CcEEEEeCCCceeccc
Confidence             999999999998743

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.90  E-value=6.4e-24  Score=218.10  Aligned_cols=153  Identities=26%  Similarity=0.334  Sum_probs=121.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-c-cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-Q-GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .++|++.+.||+|+||.||++... +++.||||++..... . ..+.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            467899999999999999999975 789999999965422 2 2334445555688889999999999999999999999


Q ss_pred             ecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          557 EYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||++ |+|.+++... .....+++..+..++.|+++||+|||++ +   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9997 5888777431 1345789999999999999999999997 6   9999999999999999999999999998875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       162 ~~  163 (290)
T 3fme_A          162 DD  163 (290)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.90  E-value=3.1e-24  Score=241.56  Aligned_cols=150  Identities=19%  Similarity=0.229  Sum_probs=115.3

Q ss_pred             eeccCCcEEEEEEEe-cCCcEEEEEEecccc----------cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          488 KLGQGGFGPVYWGRL-KDGQEIAVKRLSKAS----------GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       488 ~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ..+.|++|.+.++.. ..|+.+|||.+.+..          +...++|.+|+++|+++ +|+||+++++++.+++..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            456677776665542 358889999986431          23457899999999999 799999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||++|++|.++|.+   ..+++..   +|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+..
T Consensus       321 MEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            999999999999964   3456654   48899999999999998   99999999999999999999999999998755


Q ss_pred             CCCccccCceeec
Q 006347          636 NQDQADTGRVVGT  648 (649)
Q Consensus       636 ~~~~~~~~~~~GT  648 (649)
                      +...  +...+||
T Consensus       392 ~~~~--~~t~vGT  402 (569)
T 4azs_A          392 DCSW--PTNLVQS  402 (569)
T ss_dssp             --CC--SHHHHHH
T ss_pred             CCcc--ccCceec
Confidence            4332  2235565

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.90  E-value=8.3e-24  Score=225.82  Aligned_cols=148  Identities=30%  Similarity=0.458  Sum_probs=116.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC------C
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG------E  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~  550 (649)
                      .++|++.+.||+|+||.||+|... +|+.||||++...  .....+.+.+|+.++++++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            367999999999999999999865 6899999999653  233567889999999999999999999998764      5


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..++|+||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccc
Confidence            679999999 7899888843    56899999999999999999999988   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       180 ~~~~~  184 (367)
T 2fst_X          180 RHTAD  184 (367)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            97643

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.90  E-value=4.3e-23  Score=213.54  Aligned_cols=147  Identities=25%  Similarity=0.347  Sum_probs=128.1

Q ss_pred             cCcccc-eeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHH-hcCCCCCccceEEEEEe----CCeEE
Q 006347          481 NNFQLS-SKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVI-SKLQHRNLVRLLGCCVE----GEEKM  553 (649)
Q Consensus       481 ~~f~~~-~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~  553 (649)
                      ++|.+. +.||+|+||.||++... +++.||||+++.     ...+.+|+.++ +.++||||+++++++.+    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            567766 77999999999999975 689999999853     25677888887 55589999999999987    66789


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCc
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMA  630 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla  630 (649)
                      +||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||++.   ++.+||+|||+|
T Consensus        92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            999999999999999653 2346899999999999999999999988   999999999999998   789999999999


Q ss_pred             eeeCCC
Q 006347          631 KIFGGN  636 (649)
Q Consensus       631 ~~~~~~  636 (649)
                      +...+.
T Consensus       168 ~~~~~~  173 (299)
T 3m2w_A          168 KETTGE  173 (299)
T ss_dssp             EECTTC
T ss_pred             cccccc
Confidence            987543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.90  E-value=2e-23  Score=221.00  Aligned_cols=148  Identities=28%  Similarity=0.453  Sum_probs=131.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeC-----CeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-----EEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~  552 (649)
                      .++|.+.+.||+|+||.||+|... +|+.||||++.... .....++.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            467999999999999999999976 68999999996432 33456788999999999999999999998764     678


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||++ ++|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+.
T Consensus        90 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999997 689998843    46899999999999999999999987   99999999999999999999999999998


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       162 ~~~  164 (353)
T 2b9h_A          162 IDE  164 (353)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=1.1e-23  Score=215.65  Aligned_cols=151  Identities=29%  Similarity=0.448  Sum_probs=130.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|.+.+.||+|+||.||+|....    +..||||.+.... ....+.+.+|+.++.+++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4678889999999999999998652    3469999987542 3456789999999999999999999999764 56789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++..  ....+++..+..++.|+++||.|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus        90 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           90 IMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             EEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             EEecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            9999999999999954  2345899999999999999999999988   9999999999999999999999999999775


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       165 ~~  166 (281)
T 3cc6_A          165 DE  166 (281)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.90  E-value=8.4e-24  Score=216.09  Aligned_cols=156  Identities=26%  Similarity=0.457  Sum_probs=132.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l  554 (649)
                      .++|++.+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+.++.+++||||+++++++.+  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            357889999999999999999986 68999999996532  3456789999999999999999999999875  567899


Q ss_pred             EEecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          555 IYEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDS--RLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      ||||+++++|.+++.... ....+++..++.++.|+++||+|||+.+  ..+|+||||||+|||+++++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999986422 2345899999999999999999999875  2349999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      .+..
T Consensus       165 ~~~~  168 (279)
T 2w5a_A          165 ILNH  168 (279)
T ss_dssp             HC--
T ss_pred             eecc
Confidence            7654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.90  E-value=2.1e-23  Score=222.94  Aligned_cols=147  Identities=27%  Similarity=0.412  Sum_probs=125.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  550 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            367999999999999999999876 6889999998653  2334577899999999999999999999998765      


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      ..++||||++ ++|.+++.     ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+|
T Consensus       104 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            7899999997 57888874     24889999999999999999999987   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       175 ~~~~~  179 (371)
T 2xrw_A          175 RTAGT  179 (371)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            98753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.6e-23  Score=241.50  Aligned_cols=146  Identities=22%  Similarity=0.394  Sum_probs=127.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec--CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe-----E
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE-----K  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----~  552 (649)
                      ++|++.+.||+|+||.||++...  +++.||||++.... ....+.+.+|+.++.+++||||+++++++.+.+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            67999999999999999999975  58999999986432 3445678999999999999999999999988665     6


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      +|||||+++++|.+++..     .+++.+++.|+.||++||.|||+.+   ||||||||+|||++++ .+||+|||+++.
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence            999999999999887632     6899999999999999999999988   9999999999999986 899999999998


Q ss_pred             eCC
Q 006347          633 FGG  635 (649)
Q Consensus       633 ~~~  635 (649)
                      +..
T Consensus       231 ~~~  233 (681)
T 2pzi_A          231 INS  233 (681)
T ss_dssp             TTC
T ss_pred             ccc
Confidence            754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.89  E-value=1.5e-23  Score=225.98  Aligned_cols=149  Identities=27%  Similarity=0.378  Sum_probs=124.2

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe------EEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE------KML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~l  554 (649)
                      .+|++.+.||+|+||.||+|+...+..+|+|++.....    ...+|+.++++++|+||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            46888999999999999999998777799998854322    22369999999999999999999976443      789


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~  633 (649)
                      ||||++++.+............+++..+..++.||++||+|||+.+   |+||||||+|||++ +++.+||+|||+|+.+
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            9999987544443321123457899999999999999999999987   99999999999999 7999999999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       193 ~~~  195 (394)
T 4e7w_A          193 IAG  195 (394)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.89  E-value=7.6e-24  Score=216.57  Aligned_cols=149  Identities=32%  Similarity=0.529  Sum_probs=125.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC-eEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE-EKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey  558 (649)
                      .++|++.+.||+|+||.||++... ++.||||.++..  ...+.+.+|+.++.+++||||+++++++.+.+ ..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            357889999999999999999886 889999998653  35678999999999999999999999987654 68999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      +++++|.+++... ....+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus        97 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           97 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            9999999999542 1223789999999999999999999987   99999999999999999999999999987643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=7.2e-24  Score=220.73  Aligned_cols=158  Identities=23%  Similarity=0.373  Sum_probs=133.7

Q ss_pred             CHHHHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCC--CCCccceEEEEE
Q 006347          472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCV  547 (649)
Q Consensus       472 ~~~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~  547 (649)
                      .++.+....++|++.+.||+|+||.||++...+++.||||.+...  .....+.+.+|+.++.+++  |+||+++++++.
T Consensus        19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~   98 (313)
T 3cek_A           19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI   98 (313)
T ss_dssp             -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred             CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence            334444455779999999999999999999988999999998643  2345678999999999996  599999999999


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                      +.+..++||| +.+++|.+++..   ...+++..+..++.|+++||.|||+.+   |+||||||+|||+++ +.+||+||
T Consensus        99 ~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Df  170 (313)
T 3cek_A           99 TDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDF  170 (313)
T ss_dssp             CSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCC
T ss_pred             cCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeec
Confidence            9999999999 568999999954   346899999999999999999999987   999999999999975 89999999


Q ss_pred             CCceeeCCCC
Q 006347          628 GMAKIFGGNQ  637 (649)
Q Consensus       628 Gla~~~~~~~  637 (649)
                      |+++.+....
T Consensus       171 g~~~~~~~~~  180 (313)
T 3cek_A          171 GIANQMQPDT  180 (313)
T ss_dssp             SSSCC-----
T ss_pred             cccccccCcc
Confidence            9999875443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=2.2e-23  Score=226.67  Aligned_cols=148  Identities=28%  Similarity=0.402  Sum_probs=122.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC----C--eEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG----E--EKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~  553 (649)
                      .+|++.+.||+|+||.||+|+.. +++.||||++....    +.+.+|++++++++|+|||++++++...    +  ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            45888899999999999999986 68999999986432    2334799999999999999999998652    2  357


Q ss_pred             EEEecCCCCChhhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-CceEEEecCCce
Q 006347          554 LIYEYMPNRSLDALLFDP-LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAK  631 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~Ki~DFGla~  631 (649)
                      +||||+++ +|.+.+... .....+++..+..++.||++||+|||+.+   |+||||||+|||++.+ +.+||+|||+|+
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999975 565555321 13456899999999999999999999987   9999999999999965 678999999999


Q ss_pred             eeCCC
Q 006347          632 IFGGN  636 (649)
Q Consensus       632 ~~~~~  636 (649)
                      .+...
T Consensus       206 ~~~~~  210 (420)
T 1j1b_A          206 QLVRG  210 (420)
T ss_dssp             ECCTT
T ss_pred             hcccC
Confidence            87543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.89  E-value=1.9e-23  Score=214.60  Aligned_cols=151  Identities=32%  Similarity=0.492  Sum_probs=124.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec--CCc--EEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--DGQ--EIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--~g~--~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||+||+|+..  +++  .||||.++..   .....+++.+|+.++.+++||||+++++++.+.. .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            57889999999999999999864  333  6899988653   2345678999999999999999999999988765 88


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++++|.+++...  ...+++..+..++.|+++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+
T Consensus        97 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence            999999999999998642  345899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ....
T Consensus       172 ~~~~  175 (291)
T 1u46_A          172 PQND  175 (291)
T ss_dssp             CC-C
T ss_pred             cccc
Confidence            5443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.89  E-value=2.6e-23  Score=220.71  Aligned_cols=159  Identities=25%  Similarity=0.344  Sum_probs=121.4

Q ss_pred             HHHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe-
Q 006347          474 EELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE-  551 (649)
Q Consensus       474 ~~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-  551 (649)
                      .+.....++|++.+.||+|+||.||+|+.. +++.||||++... ......+.+|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            455667789999999999999999999986 6899999998653 3334567788888999999999999999976443 


Q ss_pred             ------EEEEEecCCCCChhhhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCceEecCCCCCcEEEcC-CCc
Q 006347          552 ------KMLIYEYMPNRSLDALLFD-PLKKERLDWRKRFNIIEGISRGLLYLH--RDSRLRIIHRDLKASNILLDE-ELN  621 (649)
Q Consensus       552 ------~~lV~Ey~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDlkp~NILl~~-~~~  621 (649)
                            .++||||+++ +|...+.. ......+++..+..++.|++.||.|||  +.+   |+||||||+|||++. ++.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence                  7899999986 44443321 123456889999999999999999999  766   999999999999997 899


Q ss_pred             eEEEecCCceeeCCCC
Q 006347          622 PKISDFGMAKIFGGNQ  637 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~~  637 (649)
                      +||+|||+|+.+....
T Consensus       171 ~kl~Dfg~a~~~~~~~  186 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSE  186 (360)
T ss_dssp             EEECCCTTCBCCCTTS
T ss_pred             EEEeeCCCceecCCCC
Confidence            9999999999875443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.89  E-value=8.5e-24  Score=224.17  Aligned_cols=145  Identities=21%  Similarity=0.293  Sum_probs=127.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecC---------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccc----------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKD---------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR----------  541 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~---------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~----------  541 (649)
                      ++|.+.+.||+|+||.||+|....         ++.||||.+...     +.+.+|+.++.+++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            679999999999999999999763         789999998643     46889999999999999987          


Q ss_pred             -----eEEEEEe-CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEE
Q 006347          542 -----LLGCCVE-GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNIL  615 (649)
Q Consensus       542 -----l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NIL  615 (649)
                           +++++.. +...++||||+ +++|.+++... ....+++.+++.|+.||++||.|||+.+   |+||||||+|||
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl  191 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF  191 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence                 6788877 77889999999 99999999642 2357999999999999999999999987   999999999999


Q ss_pred             EcCCC--ceEEEecCCceeeCC
Q 006347          616 LDEEL--NPKISDFGMAKIFGG  635 (649)
Q Consensus       616 l~~~~--~~Ki~DFGla~~~~~  635 (649)
                      ++.++  .+||+|||+|+.+..
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~  213 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCP  213 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSG
T ss_pred             EcCCCCceEEEecCcceeeccC
Confidence            99998  999999999998753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.89  E-value=7.1e-23  Score=210.77  Aligned_cols=151  Identities=25%  Similarity=0.439  Sum_probs=126.2

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEE-EeCCeEEEEE
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC-VEGEEKMLIY  556 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~  556 (649)
                      ..++|++.+.||+|+||.||+|+.. +++.||||.+....  ..+++.+|+.++.+++|++++..++.+ .+++..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            4478999999999999999999974 78899999875432  334688999999999888777766665 6677889999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceee
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIF  633 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~  633 (649)
                      ||+ +++|.+++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||+   ++++.+||+|||+|+.+
T Consensus        85 e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 9999999853  2346899999999999999999999998   9999999999999   78999999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ....
T Consensus       159 ~~~~  162 (296)
T 4hgt_A          159 RDAR  162 (296)
T ss_dssp             BCTT
T ss_pred             cCcc
Confidence            5543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=7.2e-23  Score=210.42  Aligned_cols=153  Identities=31%  Similarity=0.510  Sum_probs=135.2

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ...++|++.+.||+|+||.||+++.. +++.||||++....  ....+.+.+|+.++.+++||||+++++++.+.+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            34467999999999999999999986 68999999986532  3456789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC---CceEEEecCCce
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE---LNPKISDFGMAK  631 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~Ki~DFGla~  631 (649)
                      ||||+++++|.+++..   ...+++..+..++.||++||.|||+.+   |+||||||+||+++.+   ..+||+|||+++
T Consensus        99 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           99 VGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            9999999999988853   346899999999999999999999987   9999999999999764   479999999998


Q ss_pred             eeCCC
Q 006347          632 IFGGN  636 (649)
Q Consensus       632 ~~~~~  636 (649)
                      .....
T Consensus       173 ~~~~~  177 (287)
T 2wei_A          173 CFQQN  177 (287)
T ss_dssp             TBCCC
T ss_pred             eecCC
Confidence            77543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.89  E-value=1.4e-22  Score=208.78  Aligned_cols=150  Identities=25%  Similarity=0.445  Sum_probs=129.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEe-cCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEE-EeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRL-KDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCC-VEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~-~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~E  557 (649)
                      .++|++.+.||+|+||.||+|+. .+++.||||++....  ..+++.+|+.++.+++|++++..+.++ .+++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46799999999999999999997 478999999986533  335789999999999988766666555 56778899999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~~  634 (649)
                      |+ +++|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||+   ++++.+||+|||+++.+.
T Consensus        86 ~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99 9999999953  2346899999999999999999999988   9999999999999   588999999999999876


Q ss_pred             CCC
Q 006347          635 GNQ  637 (649)
Q Consensus       635 ~~~  637 (649)
                      ...
T Consensus       160 ~~~  162 (296)
T 3uzp_A          160 DAR  162 (296)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.89  E-value=4.4e-23  Score=215.65  Aligned_cols=151  Identities=28%  Similarity=0.504  Sum_probs=128.7

Q ss_pred             HhcCcccceeeccCCcEEEEEEEec--CCcEEEEEEecccc--cccHHHHHHHHHHHhcC---CCCCccceEEEEE----
Q 006347          479 ATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKL---QHRNLVRLLGCCV----  547 (649)
Q Consensus       479 ~~~~f~~~~~LG~G~fG~Vykg~~~--~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~----  547 (649)
                      +.++|++.+.||+|+||.||+|...  +++.||||++....  ......+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            4578999999999999999999973  68899999986432  22234677788777766   8999999999997    


Q ss_pred             -eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEe
Q 006347          548 -EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISD  626 (649)
Q Consensus       548 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~D  626 (649)
                       .....++||||++ |+|.+++... ....+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence             4557899999997 6999998643 2345899999999999999999999987   99999999999999999999999


Q ss_pred             cCCceeeC
Q 006347          627 FGMAKIFG  634 (649)
Q Consensus       627 FGla~~~~  634 (649)
                      ||+++.+.
T Consensus       164 fg~~~~~~  171 (326)
T 1blx_A          164 FGLARIYS  171 (326)
T ss_dssp             CCSCCCCC
T ss_pred             Cccccccc
Confidence            99998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.89  E-value=1.3e-22  Score=221.03  Aligned_cols=150  Identities=23%  Similarity=0.293  Sum_probs=130.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC------CCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL------QHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~  552 (649)
                      ..+|++.+.||+|+||+||+|... +++.||||++... ....+++.+|+.++..+      +|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            457999999999999999999876 5889999999653 33456778888888877      577999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc--eEEEecCCc
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN--PKISDFGMA  630 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--~Ki~DFGla  630 (649)
                      ++||||++ ++|.+++... ....+++..+..|+.||++||+|||+.+   |+||||||+|||++.++.  +||+|||+|
T Consensus       175 ~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            99999996 6899888643 3345899999999999999999999987   999999999999999887  999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       250 ~~~~~  254 (429)
T 3kvw_A          250 CYEHQ  254 (429)
T ss_dssp             EETTC
T ss_pred             eecCC
Confidence            87643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.89  E-value=2e-23  Score=217.11  Aligned_cols=156  Identities=26%  Similarity=0.398  Sum_probs=125.4

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcC----CCCCccceE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKL----QHRNLVRLL  543 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l----~H~niv~l~  543 (649)
                      +.....++|++.+.||+|+||.||+|... +++.||||++.....      .....+.+|+.++.++    +|+||++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            34455678999999999999999999875 688999999965432      1234566789988888    899999999


Q ss_pred             EEEEeCCeEEEEEec-CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCc
Q 006347          544 GCCVEGEEKMLIYEY-MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELN  621 (649)
Q Consensus       544 g~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~  621 (649)
                      +++.+.+..++|||| +++++|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+||+++ +++.
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTE
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCe
Confidence            999999999999999 789999999954   346899999999999999999999987   99999999999999 8899


Q ss_pred             eEEEecCCceeeCCC
Q 006347          622 PKISDFGMAKIFGGN  636 (649)
Q Consensus       622 ~Ki~DFGla~~~~~~  636 (649)
                      +||+|||+++.+...
T Consensus       179 ~kl~dfg~~~~~~~~  193 (312)
T 2iwi_A          179 AKLIDFGSGALLHDE  193 (312)
T ss_dssp             EEECCCSSCEECCSS
T ss_pred             EEEEEcchhhhcccC
Confidence            999999999987543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.89  E-value=5.9e-23  Score=219.47  Aligned_cols=147  Identities=25%  Similarity=0.464  Sum_probs=127.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE----
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK----  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----  552 (649)
                      .++|.+.+.||+|+||.||+|... +|+.||||++....  ....+++.+|+.++++++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            367889999999999999999876 68999999997532  23457889999999999999999999999887755    


Q ss_pred             --EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          553 --MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       553 --~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                        ++||||++ ++|.+++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|
T Consensus       121 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcc
Confidence              99999997 68888873     34899999999999999999999987   999999999999999999999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       192 ~~~~~  196 (371)
T 4exu_A          192 RHADA  196 (371)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            97643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.88  E-value=4.7e-23  Score=236.06  Aligned_cols=154  Identities=24%  Similarity=0.410  Sum_probs=133.0

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~  551 (649)
                      ....++|.+.+.||+|+||.||+|...    .+..||||+++... ....++|.+|+.++.+++||||+++++++. .+.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence            334567888999999999999999875    24679999986533 334578999999999999999999999984 567


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+++|+|.+++..  ....+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus       465 ~~lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHH--TTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             eEEEEEcCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCe
Confidence            8999999999999999964  2346899999999999999999999987   9999999999999999999999999999


Q ss_pred             eeCCC
Q 006347          632 IFGGN  636 (649)
Q Consensus       632 ~~~~~  636 (649)
                      .+...
T Consensus       540 ~~~~~  544 (656)
T 2j0j_A          540 YMEDS  544 (656)
T ss_dssp             SCCC-
T ss_pred             ecCCC
Confidence            87543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.88  E-value=1.4e-22  Score=223.62  Aligned_cols=150  Identities=25%  Similarity=0.439  Sum_probs=130.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||.||+|+.. +++.||||++....  ..+++..|++++..++| ++++.+..++.+.+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            367999999999999999999974 78999999876433  33468899999999976 667777778888899999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---cCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---~~~~~~Ki~DFGla~~~~  634 (649)
                      |+ +++|.+++..  ....+++.+++.|+.||+.||+|||+.+   ||||||||+||||   ++++.+||+|||+|+.+.
T Consensus        84 ~~-g~sL~~ll~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 9999999953  2356999999999999999999999988   9999999999999   688999999999999876


Q ss_pred             CCC
Q 006347          635 GNQ  637 (649)
Q Consensus       635 ~~~  637 (649)
                      ...
T Consensus       158 ~~~  160 (483)
T 3sv0_A          158 DTS  160 (483)
T ss_dssp             CTT
T ss_pred             CCc
Confidence            543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.88  E-value=9.1e-23  Score=220.60  Aligned_cols=147  Identities=28%  Similarity=0.473  Sum_probs=115.5

Q ss_pred             ccc-ceeeccCCcEEEEEEEec---CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEEEE
Q 006347          483 FQL-SSKLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKMLIY  556 (649)
Q Consensus       483 f~~-~~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~  556 (649)
                      |.+ .++||+|+||+||+|...   +++.||||++...  ...+.+.+|+.++++++||||+++++++.+  ....+|||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            443 358999999999999965   5789999999653  234678899999999999999999999975  66889999


Q ss_pred             ecCCCCChhhhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE----cCCCceEEEe
Q 006347          557 EYMPNRSLDALLFDP------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL----DEELNPKISD  626 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~Ki~D  626 (649)
                      ||++ ++|.+++...      .....+++..+..|+.||+.||+|||+.+   |+||||||+|||+    ++++.+||+|
T Consensus       100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            9996 5787776421      12235899999999999999999999988   9999999999999    7789999999


Q ss_pred             cCCceeeCC
Q 006347          627 FGMAKIFGG  635 (649)
Q Consensus       627 FGla~~~~~  635 (649)
                      ||+|+.+..
T Consensus       176 fg~a~~~~~  184 (405)
T 3rgf_A          176 MGFARLFNS  184 (405)
T ss_dssp             TTCCC----
T ss_pred             CCCceecCC
Confidence            999998754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.88  E-value=3.2e-23  Score=221.42  Aligned_cols=150  Identities=14%  Similarity=0.157  Sum_probs=113.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcC--CCCCccceE-------EEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKL--QHRNLVRLL-------GCC  546 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l--~H~niv~l~-------g~~  546 (649)
                      ..+|.+.+.||+|+||.||+|... +++.||||++.....   ...+.+.+|+.++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            345888999999999999999976 789999999976432   3456777885544444  699987755       444


Q ss_pred             EeC-----------------CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCc
Q 006347          547 VEG-----------------EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKR------FNIIEGISRGLLYLHRDSRLR  603 (649)
Q Consensus       547 ~~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~  603 (649)
                      ...                 ...+|||||++ |+|.+++...  ...+.+..+      +.++.||++||+|||+.+   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---  214 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---  214 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence            433                 33799999998 8999999642  223455556      788899999999999988   


Q ss_pred             eEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          604 IIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       604 iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+||||||+|||+++++.+||+|||+|+..+.
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~  246 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT  246 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTC
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCC
Confidence            99999999999999999999999999998743

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.88  E-value=1.1e-22  Score=213.02  Aligned_cols=151  Identities=25%  Similarity=0.353  Sum_probs=126.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHH-HHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVM-VISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.+.||+|+||.||++... +++.||||++.... .....++..|+. +++.++||||+++++++.+.+..++|||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            67888899999999999999986 78999999997542 234456666666 7777899999999999999999999999


Q ss_pred             cCCCCChhhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFD--PLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |+++ +|.+++..  ......+++..+..++.|+++||.|||+. +   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            9975 88777642  11245689999999999999999999997 7   9999999999999999999999999998774


Q ss_pred             C
Q 006347          635 G  635 (649)
Q Consensus       635 ~  635 (649)
                      .
T Consensus       178 ~  178 (327)
T 3aln_A          178 D  178 (327)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.88  E-value=8.5e-23  Score=216.48  Aligned_cols=146  Identities=25%  Similarity=0.468  Sum_probs=127.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCe------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEE------  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------  551 (649)
                      ++|.+.+.||+|+||.||+|... +|+.||||++....  ....+++.+|+.++.+++||||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            57888999999999999999976 68999999996532  2345788999999999999999999999987654      


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||++ ++|.+++.     ..+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++
T Consensus       104 ~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             CEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             EEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccccc
Confidence            499999997 68888773     24899999999999999999999988   9999999999999999999999999998


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      ....
T Consensus       175 ~~~~  178 (353)
T 3coi_A          175 HADA  178 (353)
T ss_dssp             C---
T ss_pred             CCCC
Confidence            7643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.88  E-value=9e-23  Score=219.07  Aligned_cols=135  Identities=25%  Similarity=0.383  Sum_probs=114.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC--------CCCccceEEEEE---
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ--------HRNLVRLLGCCV---  547 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~---  547 (649)
                      .++|++.++||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+.++.+++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            367999999999999999999865 6889999999643 345678899999999985        788999999988   


Q ss_pred             -eCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCC
Q 006347          548 -EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEEL  620 (649)
Q Consensus       548 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~  620 (649)
                       ++...+|||||+ +++|.+++... ....+++..+..|+.||++||+|||++ +   |+||||||+|||++.++
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~  184 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNE  184 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccc
Confidence             455789999999 55666655432 235689999999999999999999998 6   99999999999999775

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.88  E-value=2.2e-22  Score=210.98  Aligned_cols=150  Identities=23%  Similarity=0.331  Sum_probs=130.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEe-c-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCC------CccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRL-K-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR------NLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~-~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~------niv~l~g~~~~~~~  551 (649)
                      .++|++.+.||+|+||.||++.. . +++.||||+++.. ....+.+.+|+.++..++|+      +++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35799999999999999999987 3 6889999999653 34567888999999988765      49999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-------------  618 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-------------  618 (649)
                      .++||||+ +++|.+++... ....+++..+..++.||++||+|||+.+   |+||||||+|||++.             
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence            99999999 89999998643 2346899999999999999999999987   999999999999987             


Q ss_pred             ------CCceEEEecCCceeeCC
Q 006347          619 ------ELNPKISDFGMAKIFGG  635 (649)
Q Consensus       619 ------~~~~Ki~DFGla~~~~~  635 (649)
                            ++.+||+|||+++....
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTS
T ss_pred             ccccccCCCceEeeCcccccCcc
Confidence                  67899999999998643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.88  E-value=2.1e-23  Score=217.40  Aligned_cols=152  Identities=32%  Similarity=0.553  Sum_probs=129.4

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      +.....++|++.+.||+|+||.||+|....  .+|||.++...  ....+.+.+|+.++.+++|+||+++++++.+.+..
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  104 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL  104 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence            333445788899999999999999999863  49999986432  33456788999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ++||||+++++|.+++..  ....+++..+..++.||++||+|||+.+   |+||||||+|||++ ++.+||+|||+++.
T Consensus       105 ~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          105 AIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             EEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             EEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccc
Confidence            999999999999999954  2346899999999999999999999987   99999999999998 67999999999887


Q ss_pred             eC
Q 006347          633 FG  634 (649)
Q Consensus       633 ~~  634 (649)
                      ..
T Consensus       179 ~~  180 (319)
T 2y4i_B          179 SG  180 (319)
T ss_dssp             --
T ss_pred             cc
Confidence            63

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.88  E-value=7.5e-23  Score=214.02  Aligned_cols=154  Identities=25%  Similarity=0.370  Sum_probs=133.7

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccc------cHHHHHHHHHHHhcCC--CCCccceEEEEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ------GLEEFMNEVMVISKLQ--HRNLVRLLGCCV  547 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~------~~~~f~~E~~~l~~l~--H~niv~l~g~~~  547 (649)
                      ....++|++.+.||+|+||.||+|... +++.||||.+......      ..+.+.+|+.++.+++  |+||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            344578999999999999999999865 6899999998654221      2356778999999996  599999999999


Q ss_pred             eCCeEEEEEecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEEE
Q 006347          548 EGEEKMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKIS  625 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki~  625 (649)
                      +.+..++||||+.+ ++|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||++ +++.+||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEe
Confidence            99999999999976 899999853   356899999999999999999999987   99999999999999 78999999


Q ss_pred             ecCCceeeCCC
Q 006347          626 DFGMAKIFGGN  636 (649)
Q Consensus       626 DFGla~~~~~~  636 (649)
                      |||+++.+...
T Consensus       193 Dfg~~~~~~~~  203 (320)
T 3a99_A          193 DFGSGALLKDT  203 (320)
T ss_dssp             CCTTCEECCSS
T ss_pred             eCccccccccc
Confidence            99999987543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.88  E-value=1.5e-22  Score=221.04  Aligned_cols=149  Identities=27%  Similarity=0.326  Sum_probs=120.3

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEecCC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      .|...+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+.++.++ +|||||++++++.+++..+|||||++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            34556789999999998776667999999998542   345778999999886 89999999999999999999999995


Q ss_pred             CCChhhhhcCCCCC-C---CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC-------------CceE
Q 006347          561 NRSLDALLFDPLKK-E---RLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE-------------LNPK  623 (649)
Q Consensus       561 ~gsL~~~l~~~~~~-~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-------------~~~K  623 (649)
                       |+|.+++...... .   ..++..+..++.||+.||+|||+.+   |+||||||+|||++.+             +.+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             6999999653221 1   1133356789999999999999987   9999999999999754             5899


Q ss_pred             EEecCCceeeCCCC
Q 006347          624 ISDFGMAKIFGGNQ  637 (649)
Q Consensus       624 i~DFGla~~~~~~~  637 (649)
                      |+|||+|+.+....
T Consensus       169 L~DFG~a~~~~~~~  182 (434)
T 2rio_A          169 ISDFGLCKKLDSGQ  182 (434)
T ss_dssp             ECCCTTCEECCC--
T ss_pred             EcccccceecCCCC
Confidence            99999999886543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.87  E-value=6.2e-22  Score=208.58  Aligned_cols=148  Identities=26%  Similarity=0.313  Sum_probs=121.2

Q ss_pred             hcCcccce-eeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEE
Q 006347          480 TNNFQLSS-KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKM  553 (649)
Q Consensus       480 ~~~f~~~~-~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~  553 (649)
                      .++|.+.+ .||+|+||.||+|... +++.||||++... .   +........+..+.|+||+++++++..    +...+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            46788754 6999999999999987 6899999998542 1   222222334566799999999999986    44579


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCc
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMA  630 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla  630 (649)
                      +||||+++|+|.+++... ....+++.++..++.|+++||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       103 lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            999999999999999753 2346899999999999999999999997   999999999999986   455999999999


Q ss_pred             eeeCC
Q 006347          631 KIFGG  635 (649)
Q Consensus       631 ~~~~~  635 (649)
                      +....
T Consensus       179 ~~~~~  183 (336)
T 3fhr_A          179 KETTQ  183 (336)
T ss_dssp             EEC--
T ss_pred             eeccc
Confidence            97653

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.87  E-value=1.7e-22  Score=226.11  Aligned_cols=135  Identities=19%  Similarity=0.260  Sum_probs=110.0

Q ss_pred             cceeeccCCcEEEEEEEecCCcEEEEEEeccccc--------ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          485 LSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG--------QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       485 ~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ..+.||+|+||.||++... ++.+++|+......        ...+.|.+|++++.+++||||+++..++.+.++.+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            3568999999999999554 78899998643211        12356899999999999999998877778888899999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++++|.+++..           +..++.|+++||.|||+++   |+||||||+|||+++  ++||+|||+|+.+...
T Consensus       419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            99999999999843           5579999999999999988   999999999999999  9999999999998554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.87  E-value=3.2e-22  Score=208.18  Aligned_cols=150  Identities=26%  Similarity=0.409  Sum_probs=116.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-cc-HHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QG-LEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      .++|++.+.||+|+||.||+|... +++.||||++..... .. .+.+..+..++..++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            357888899999999999999986 789999999965432 22 234445556788889999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+ ++.+..+...  ....+++..+..++.|+++||.|||+. +   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       104 e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          104 ELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             CCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            999 4555555432  235689999999999999999999985 6   99999999999999999999999999987644

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.87  E-value=1.4e-22  Score=220.94  Aligned_cols=148  Identities=24%  Similarity=0.345  Sum_probs=121.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEEEec
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ..+|...+.||+|+||+|+.....+++.||||++.....   ..+.+|+.++.++ +|||||++++++.+.+..+|||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            346888899999999996655556789999999965332   3456899999999 799999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-----CCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~Ki~DFGla~~~  633 (649)
                      ++ |+|.+++...  ...+.+..+..++.||++||+|||+.+   |+||||||+|||++.     ...+||+|||+|+.+
T Consensus       100 ~~-g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          100 CA-ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CS-EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CC-CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            96 6999999653  223444556789999999999999988   999999999999953     346889999999987


Q ss_pred             CCC
Q 006347          634 GGN  636 (649)
Q Consensus       634 ~~~  636 (649)
                      ...
T Consensus       174 ~~~  176 (432)
T 3p23_A          174 AVG  176 (432)
T ss_dssp             ---
T ss_pred             cCC
Confidence            543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.87  E-value=1.1e-21  Score=210.55  Aligned_cols=155  Identities=25%  Similarity=0.350  Sum_probs=130.7

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CC-----CccceEEEEEeC
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HR-----NLVRLLGCCVEG  549 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~  549 (649)
                      ....++|++.+.||+|+||+||+|... +++.||||+++.. ....+++..|+.++..++ |+     +++++++++...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            344678999999999999999999876 6889999999643 344577888999988884 55     499999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc--CCCceEEEec
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD--EELNPKISDF  627 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~--~~~~~Ki~DF  627 (649)
                      +..+|||||++ ++|.+++... ....+++..+..++.|++.||.|||.+ ..+|+||||||+|||++  .++.+||+||
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF  205 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF  205 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred             CceEEEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence            99999999996 5999998653 234589999999999999999999953 23499999999999994  5788999999


Q ss_pred             CCceeeCC
Q 006347          628 GMAKIFGG  635 (649)
Q Consensus       628 Gla~~~~~  635 (649)
                      |+|+.+..
T Consensus       206 G~a~~~~~  213 (382)
T 2vx3_A          206 GSSCQLGQ  213 (382)
T ss_dssp             TTCEETTC
T ss_pred             cCceeccc
Confidence            99998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.87  E-value=9.2e-22  Score=207.72  Aligned_cols=150  Identities=21%  Similarity=0.322  Sum_probs=128.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CC-cEEEEEEecccccccHHHHHHHHHHHhcCCCCC------ccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DG-QEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN------LVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g-~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~  551 (649)
                      .++|++.+.||+|+||.||++... ++ +.||||+++.. ....+.+.+|+.++.+++|++      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            468999999999999999999975 34 68999999653 345678889999999997665      9999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE---------------
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL---------------  616 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl---------------  616 (649)
                      .++||||+ +++|.+++... ....+++..+..++.||++||+|||+.+   |+||||||+|||+               
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence            99999999 66776666442 2346899999999999999999999987   9999999999999               


Q ss_pred             ----cCCCceEEEecCCceeeCC
Q 006347          617 ----DEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       617 ----~~~~~~Ki~DFGla~~~~~  635 (649)
                          +.++.+||+|||+++....
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~  194 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHE  194 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccCCCcEEEeecCccccccc
Confidence                6788999999999997543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.87  E-value=7.1e-23  Score=231.80  Aligned_cols=153  Identities=30%  Similarity=0.414  Sum_probs=132.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEe------CCeE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE------GEEK  552 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~~  552 (649)
                      ++|.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.++.+++||||+++++++..      ++..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            67999999999999999999975 6899999998653 33456789999999999999999999999765      6678


Q ss_pred             EEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCc---eEEEecCC
Q 006347          553 MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELN---PKISDFGM  629 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~---~Ki~DFGl  629 (649)
                      ++||||+++|+|.+++........+++..+..|+.+++.||+|||+.+   |+||||||+|||++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence            999999999999999976544456899999999999999999999987   999999999999997664   99999999


Q ss_pred             ceeeCCC
Q 006347          630 AKIFGGN  636 (649)
Q Consensus       630 a~~~~~~  636 (649)
                      ++.+...
T Consensus       171 a~~~~~~  177 (676)
T 3qa8_A          171 AKELDQG  177 (676)
T ss_dssp             CCBTTSC
T ss_pred             ccccccc
Confidence            9987543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.86  E-value=5.8e-22  Score=211.18  Aligned_cols=149  Identities=23%  Similarity=0.383  Sum_probs=128.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-----------CCCccceEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-----------HRNLVRLLGCCVE  548 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~  548 (649)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            57999999999999999999975 7899999999643 345577889999999886           8899999999987


Q ss_pred             CC----eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEc------
Q 006347          549 GE----EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLD------  617 (649)
Q Consensus       549 ~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~------  617 (649)
                      .+    ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ +   |+||||||+|||++      
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence            54    789999999 89999998643 234589999999999999999999997 7   99999999999994      


Q ss_pred             CCCceEEEecCCceeeCC
Q 006347          618 EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       618 ~~~~~Ki~DFGla~~~~~  635 (649)
                      ..+.+||+|||+|+.+..
T Consensus       173 ~~~~~kl~Dfg~a~~~~~  190 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDE  190 (373)
T ss_dssp             TEEEEEECCCTTCEETTB
T ss_pred             CcceEEEcccccccccCC
Confidence            445899999999998754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=7.3e-22  Score=202.88  Aligned_cols=142  Identities=19%  Similarity=0.181  Sum_probs=115.1

Q ss_pred             HHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccccc------------------ccHHHHHHHHHHHhcCCCC
Q 006347          476 LATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG------------------QGLEEFMNEVMVISKLQHR  537 (649)
Q Consensus       476 l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~  537 (649)
                      +......|++.+.||+|+||.||+|...+|+.||||.++....                  .....+.+|+.++.+++  
T Consensus        85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--  162 (282)
T 1zar_A           85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--  162 (282)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence            3344455777799999999999999997799999999864321                  13467899999999999  


Q ss_pred             CccceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc
Q 006347          538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD  617 (649)
Q Consensus       538 niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~  617 (649)
                      | +++.+++. .+..++||||+++++|.+ +..         .....++.|+++||.|||+.+   |+||||||+|||++
T Consensus       163 ~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~  227 (282)
T 1zar_A          163 G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS  227 (282)
T ss_dssp             T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred             C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE
Confidence            4 66666543 356699999999999988 421         123469999999999999988   99999999999999


Q ss_pred             CCCceEEEecCCceeeCC
Q 006347          618 EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       618 ~~~~~Ki~DFGla~~~~~  635 (649)
                       ++.+||+|||+|+....
T Consensus       228 -~~~vkl~DFG~a~~~~~  244 (282)
T 1zar_A          228 -EEGIWIIDFPQSVEVGE  244 (282)
T ss_dssp             -TTEEEECCCTTCEETTS
T ss_pred             -CCcEEEEECCCCeECCC
Confidence             99999999999997643

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.85  E-value=6.1e-21  Score=166.76  Aligned_cols=110  Identities=20%  Similarity=0.395  Sum_probs=94.3

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      +|+|.+|+.|.+|++|+ ++|.|+|+|+.+++      -++|+   ..++||.||++.|.  .++.++|..||||||+|.
T Consensus         1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGn------lvl~~---~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~   68 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCN------FVLYD---SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQ   68 (110)
T ss_dssp             CCEEETTCEECTTCEEE-ETTTEEEEECTTSC------EEEEE---TTEEEEECCCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCc------EEEEE---CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECC
Confidence            47899999999999999 99999999998775      37787   37999999998764  357899999999999999


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCc
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPT  149 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PT  149 (649)
                      ++.++|+|++.. ..+...++|+|+|||||++.    ++||||+||.
T Consensus        69 ~~~~~W~S~t~~-~~g~~~l~l~~dGnlvl~~~----~~W~S~~~~~  110 (110)
T 3a0c_A           69 SNRVIWQTKTNG-KEDHYVLVLQQDRNVVIYGP----VVWATGSGPA  110 (110)
T ss_dssp             TCCEEEECCCCC-SSSCCEEEECTTSCEEEECS----EEEECSCCC-
T ss_pred             CCcEEEecCCCC-CCCCEEEEEeCCccEEEECC----CEecCCCcCC
Confidence            999999999863 33455899999999999962    7999999984

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.85  E-value=6.1e-21  Score=165.07  Aligned_cols=104  Identities=17%  Similarity=0.371  Sum_probs=88.7

Q ss_pred             ccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCC
Q 006347           24 SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQ  103 (649)
Q Consensus        24 ~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~  103 (649)
                      ++|.+||.|.+|++|.|  |.|.|.|..+++     |.+ |.   ..++||+|||+.|.. ..+.|+|+.||||+|+|++
T Consensus         2 n~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvl-y~---~~~~vW~ant~~~~~-~~~~L~l~~dGnLvL~d~~   69 (105)
T 4h3o_A            2 NILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVL-YD---HSTSTWASNTEIGGK-SGCSAVLQSDGNFVVYDSS   69 (105)
T ss_dssp             CEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEE-EE---TTEEEEECCCCCTTC-CSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEE-EE---CCEEEEEecCCCCCC-ccEEEEEeCCccEEEECCC
Confidence            68999999999999998  889999988775     334 43   368999999999986 4578999999999999999


Q ss_pred             ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeee
Q 006347          104 KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus       104 ~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      +.+||+|++.. .....+|+|+|+|||||++.    +||||
T Consensus        70 ~~~vWss~t~~-~~~~~~l~L~ddGNlVly~~----~~W~S  105 (105)
T 4h3o_A           70 GRSLWASHSTR-GSGNYILILQDDGNVIIYGS----DIWST  105 (105)
T ss_dssp             CCEEEECCCCC-CSSCEEEEECTTSCEEEEES----EEEEC
T ss_pred             cEEEEEecCCC-CCCCEEEEEeCCCeEEEECC----cEecC
Confidence            99999999873 33456899999999999963    59998

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.85  E-value=7.3e-21  Score=168.48  Aligned_cols=108  Identities=16%  Similarity=0.306  Sum_probs=93.3

Q ss_pred             cccccccCCCCcCCCCeEE--eCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEE
Q 006347           21 AIDSSITSSQLIRDPDAIL--SNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLV   98 (649)
Q Consensus        21 ~~~~~l~~g~~l~~~~~l~--S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~   98 (649)
                      ++.++|.+|++|.+|++|+  |++|.|+|+|+.+++      -+||++   .++||+|||+.|-  .++.++|+.|||||
T Consensus         6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgn------lvly~~---~~~vW~sn~~~~~--~~~~l~l~~dGNLV   74 (119)
T 1b2p_A            6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCN------LVLYDN---NNPIWATNTGGLG--NGCRAVLQPDGVLV   74 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSC------EEEEET---TEEEEECCCTTSC--SSCEEEECTTSCEE
T ss_pred             ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCC------EEEEEC---CEEEEeCCCccCC--CceEEEEccCCEEE
Confidence            3478999999999999999  999999999998775      368876   7999999998763  45789999999999


Q ss_pred             EEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeee
Q 006347           99 LVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus        99 l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      |+|.++.++|+|++.. ..+...++|+|+|||||++    .++|||
T Consensus        75 l~d~~~~~lW~S~~~~-~~g~~~l~l~~~Gnlvl~~----~~~W~S  115 (119)
T 1b2p_A           75 VITNENVTVWQSPVAG-KAGHYVLVLQPDRNVVIYG----DALWAT  115 (119)
T ss_dssp             EECTTCCEEEECSCCC-CSSCEEEEECTTSCEEEEE----SEEEEC
T ss_pred             EEeCCCcEEEcCCCCC-CCCCEEEEEECCCcEEEEC----ccEeCC
Confidence            9999999999998763 2345689999999999997    279998

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.83  E-value=2.7e-20  Score=164.18  Aligned_cols=110  Identities=22%  Similarity=0.368  Sum_probs=92.7

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      .|+|.+||+|.+|++|+  +|.|+|+|+.+++      -++|.   ..++||+|||+.|.  .++.|+|+.||||+|+|.
T Consensus         2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn------lvly~---~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~   68 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN------LVKYQ---NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDH   68 (115)
T ss_dssp             CCEEETTCEEETTEEEE--ETTEEEEECTTSC------EEEEE---TTEEEEECSCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc------EEEEe---CCEEEEeCCCCCCC--CceEEEECCCCcEEEECC
Confidence            47999999999999998  7999999987764      23465   37899999999884  357899999999999999


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcc
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTD  150 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTD  150 (649)
                      ++.++|+|++.. +....+|+|+|+|||||++.    ++||||.+++.
T Consensus        69 ~~~~vW~S~~~~-~~g~~~l~l~~dGnlvl~~~----~~W~S~~~~~~  111 (115)
T 2dpf_A           69 NNNDVWGSACWG-DNGKYALVLQKDGRFVIYGP----VLWSLGPNGCR  111 (115)
T ss_dssp             TCCEEEECCCCC-SSSCCEEEECTTSCEEEECS----EEECSSTTCBC
T ss_pred             CceEEEEcCCCC-CCCCEEEEEeCCCeEEEECC----CEEECCCCCCc
Confidence            899999998862 23456799999999999952    79999988754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.82  E-value=2e-20  Score=202.85  Aligned_cols=151  Identities=17%  Similarity=0.193  Sum_probs=115.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCC-CCccc---------eE--
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQH-RNLVR---------LL--  543 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H-~niv~---------l~--  543 (649)
                      ..+|+..+.||+|+||.||+|+.. +|+.||||++....   ....+.|.+|+.++..++| +|...         ..  
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            345777889999999999999965 78999999987332   2346889999999999987 32111         11  


Q ss_pred             ----------EEEEe-----CCeEEEEEecCCCCChhhhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 006347          544 ----------GCCVE-----GEEKMLIYEYMPNRSLDALLFD----PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRI  604 (649)
Q Consensus       544 ----------g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  604 (649)
                                .+...     ....+++|+++ +++|.+++..    ......+++..++.|+.||++||+|||+.+   |
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence                      11111     12346677765 7899988841    123456788999999999999999999988   9


Q ss_pred             EecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          605 IHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       605 iHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      |||||||+|||++.++.+||+|||+|+..+
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecC
Confidence            999999999999999999999999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.81  E-value=8.5e-20  Score=160.23  Aligned_cols=110  Identities=19%  Similarity=0.424  Sum_probs=92.4

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      +|+|.+||.|.+|++|  ++|.|+|+|+.+++      -++|.+   .++||+||++.+  +.++.++|..+|||||+| 
T Consensus         1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgn------lvl~~~---~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-   66 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCN------LVLYDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-   66 (112)
T ss_dssp             CCEEETTEEECTTCEE--EETTEEEEECTTSC------EEEEET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-
T ss_pred             CCCCCCCCEECCCCEE--eCCCEEEEEcCCCc------EEEEEC---CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-
Confidence            4899999999999999  57999999998876      356765   689999999764  345789999999999999 


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCC
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEP  148 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~P  148 (649)
                      ++.++|+|.+.. ..+...++|+++|||||++. .+.++||||++.
T Consensus        67 ~~~~~W~S~~~~-~~g~~~l~l~~dGnlvl~~~-~~~~~W~S~~~~  110 (112)
T 1xd5_A           67 GSRAIWASNTNR-QNGNYYLILQRDRNVVIYDN-SNNAIWATHTNV  110 (112)
T ss_dssp             TTEEEEECCCCC-SCCCCEEEECTTSCEEEECT-TSCEEEECCCCC
T ss_pred             CCEEEEECCccC-CCCCEEEEEeCCCcEEEECC-CCceEEECCCcc
Confidence            789999998762 23356899999999999974 467899999985

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.79  E-value=1.6e-19  Score=182.88  Aligned_cols=139  Identities=17%  Similarity=0.196  Sum_probs=108.0

Q ss_pred             cccceeeccCCcEEEEEEEe-cCCcE--EEEEEecccccc------------------------cHHHHHHHHHHHhcCC
Q 006347          483 FQLSSKLGQGGFGPVYWGRL-KDGQE--IAVKRLSKASGQ------------------------GLEEFMNEVMVISKLQ  535 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~-~~g~~--vAVK~l~~~~~~------------------------~~~~f~~E~~~l~~l~  535 (649)
                      |.+.+.||+|+||.||+|.. .+|+.  ||||.++.....                        ....+.+|+..+.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999998 67888  999987542111                        1136889999999998


Q ss_pred             CCCc--cceEEEEEeCCeEEEEEecCCC-C----ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceEec
Q 006347          536 HRNL--VRLLGCCVEGEEKMLIYEYMPN-R----SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH-RDSRLRIIHR  607 (649)
Q Consensus       536 H~ni--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHr  607 (649)
                      |+++  +.++.+    +..+|||||+.+ |    +|.++...      .++.....++.|++.||.||| +.+   |+||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr  195 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LVHA  195 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence            8764  444432    356899999942 4    67666422      224456789999999999999 777   9999


Q ss_pred             CCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          608 DLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       608 Dlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||||+|||+++  .+||+|||+|+.....
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~~~~~  222 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVTLRHP  222 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred             CCCHHHEEEcC--cEEEEECcccccCCCc
Confidence            99999999998  9999999999987443

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.77  E-value=1.2e-18  Score=151.90  Aligned_cols=104  Identities=19%  Similarity=0.376  Sum_probs=87.0

Q ss_pred             ccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCC
Q 006347           24 SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQ  103 (649)
Q Consensus        24 ~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~  103 (649)
                      ++|.+||.|.+|++|+  +|.|+|+|+.+++   .   +.|..   .++||++|++.+  +.++.|+|+.||||+|+|.+
T Consensus         2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn---L---vly~~---~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~   68 (109)
T 3dzw_A            2 NILYSGETLSPGEFLN--NGRYVFIMQEDCN---L---VLYDV---DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPR   68 (109)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC---E---EEEET---TEEEEECCCTTS--SSSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEeCCCCEEE--CCCEEEEEcCCCc---E---EEEeC---CEEEEECCcccC--CCCEEEEEeCCCCEEEECCC
Confidence            6899999999999997  6999999988775   2   34655   589999999876  34578999999999999999


Q ss_pred             ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeec
Q 006347          104 KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF  145 (649)
Q Consensus       104 ~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSF  145 (649)
                      +.++|++++.. .....+|+|+|+|||||++.    ++|||=
T Consensus        69 ~~~~W~S~t~~-~~~~~~~~L~ddGNlvly~~----~~W~s~  105 (109)
T 3dzw_A           69 NNPIWASNTGG-ENGNYVCVLQKDRNVVIYGT----ARWATG  105 (109)
T ss_dssp             SCEEEECCCCC-SSSCEEEEECTTSCEEEEES----CCCCCC
T ss_pred             CCEEEECCCCC-CCCCEEEEEeCCCEEEEECC----CEEeCC
Confidence            99999999863 22346799999999999973    699983

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.69  E-value=5.5e-17  Score=141.46  Aligned_cols=104  Identities=17%  Similarity=0.328  Sum_probs=84.3

Q ss_pred             ccccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEc
Q 006347           22 IDSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVN  101 (649)
Q Consensus        22 ~~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~  101 (649)
                      +.|+|.+||.|..|+.|+|  |.|.|-|...++     | +.|..    ++||.+|++..  +.++.|+|+.||||+|+|
T Consensus         5 ~~dtL~~gq~L~~g~~L~s--g~~~L~~q~dGn-----L-vl~~~----~~vW~snt~~~--~~~~~l~l~~dGNLvl~d   70 (110)
T 3r0e_B            5 TNNLLFSGQVLYGDGRLTA--KNHQLVMQGDCN-----L-VLYGG----KYGWQSNTHGN--GEHCFLRLNHKGELIIKD   70 (110)
T ss_dssp             BTTEEETTCEEETTEEEEC--SSCEEEECTTSC-----E-EEECS----SSCEECCCTTS--SSSCEEEECTTSCEEEEC
T ss_pred             ccCEECCCCEecCCCEEEe--CCEEEEEcCCCe-----E-EEECC----eEEEECCCcCC--CcCEEEEEeCCCcEEEEe
Confidence            3689999999999999998  569997766554     2 33654    48999999863  345789999999999999


Q ss_pred             CCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeee
Q 006347          102 GQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus       102 ~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      .++.++|++++.. .....+|+|+|+|||||++    .++|+|
T Consensus        71 ~~~~~iW~S~t~~-~~~~~~~~L~~dGNlvly~----~~~W~t  108 (110)
T 3r0e_B           71 DDFKTIWSSRSSS-KQGEYVLILQDDGFGVIYG----PAIFET  108 (110)
T ss_dssp             TTCCEEEECCCCC-SSSCCEEEECTTSCEEEEC----SEEEES
T ss_pred             CCCCEEEEcCCcC-CCCCEEEEEcCCccEEEec----CCEecC
Confidence            9999999999863 2334689999999999996    379997

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.69  E-value=9.6e-17  Score=140.70  Aligned_cols=97  Identities=20%  Similarity=0.432  Sum_probs=78.9

Q ss_pred             CCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCccc
Q 006347           80 NPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHG  159 (649)
Q Consensus        80 ~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~  159 (649)
                      .|+.+...+|.|+.||+|+|++. ++++|++++.. ......|+|+|+|||||++  ++.++||||+             
T Consensus        14 ~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~-~~~~~~l~l~~~GNLvl~d--~~~~~W~S~~-------------   76 (112)
T 1xd5_A           14 GSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNG-KASGCVLKMQNDGNLVIYS--GSRAIWASNT-------------   76 (112)
T ss_dssp             CEEEETTEEEEECTTSCEEEEET-TEEEEECCCTT-SCSSEEEEECTTSCEEEEE--TTEEEEECCC-------------
T ss_pred             CEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcC-CCCCEEEEEeCCCCEEEEc--CCEEEEECCc-------------
Confidence            34444567899999999999988 89999999863 2235689999999999998  4679999994             


Q ss_pred             ccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEc-CCeeeeecCCCCC
Q 006347          160 IDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWN-VSRPYWRSGPWNG  213 (649)
Q Consensus       160 ~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~-~~~~yw~sg~~~~  213 (649)
                                        +|++|.|++.++++|+  ++++. .+.+||+|++|+|
T Consensus        77 ------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 ------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             ------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             ------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                              4457889999999998  55555 5689999999986

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.67  E-value=3.7e-16  Score=136.99  Aligned_cols=106  Identities=15%  Similarity=0.298  Sum_probs=86.7

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      .++|.+||.|..|+.|.+  |.|.|-|...++     |.+ |.. ...++||.+|+..+.  .++.|+|+.||||||+|.
T Consensus         6 ~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL-~~~-~~~~~vWssnt~~~~--~~~~l~l~~dGNLVl~d~   74 (113)
T 3mez_B            6 RNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVL-TKG-SKTNIVWESGTSGRG--QHCFMRLGHSGELDITDD   74 (113)
T ss_dssp             SSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEE-EET-TTTEEEEECCCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEE-EEC-CCCEEEEECCcccCC--cCEEEEEeCCCcEEEECC
Confidence            689999999999999985  889999987765     333 433 136899999998763  357899999999999999


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeee
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      ++.++|++++.. .....+|+|+|+|||||++    .+||+|
T Consensus        75 ~~~~iW~S~t~~-~~~~~~~~L~~dGnlvly~----~~~W~s  111 (113)
T 3mez_B           75 RLNTVFVSNTVG-QEGDYVLILQINGQAVVYG----PAVWST  111 (113)
T ss_dssp             TSCEEEECSCCC-SSSCCEEEECTTSCEEEEC----SEEEES
T ss_pred             CCCEEEECCCcC-CCCCEEEEEcCCceEEEec----CCEecC
Confidence            999999999863 2234689999999999996    479997

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.66  E-value=1.7e-16  Score=138.46  Aligned_cols=89  Identities=21%  Similarity=0.450  Sum_probs=73.6

Q ss_pred             CcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccC
Q 006347           85 SSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRT  164 (649)
Q Consensus        85 ~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~  164 (649)
                      ...+|.|+.||||+|++ .+++||++++... .....|+|+|+|||||++. ++.++||||.                  
T Consensus        20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~-~~~~~l~l~~dGNLVl~~~-~~~~~W~S~t------------------   78 (110)
T 3a0c_A           20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGL-GSGCRLTLHNNGNLVIYDQ-SNRVIWQTKT------------------   78 (110)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECCCTTS-CSSCEEEECTTSCEEEECT-TCCEEEECCC------------------
T ss_pred             CCEEEEEcCCCcEEEEE-CCEEEEECCCCCC-CCcEEEEEeCCCCEEEECC-CCcEEEecCC------------------
Confidence            45789999999999999 4899999998632 3356899999999999985 5679999992                  


Q ss_pred             CceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCC
Q 006347          165 GKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPW  211 (649)
Q Consensus       165 g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~  211 (649)
                                   ++++|.|+++++++|+  ++++++  +||+|+++
T Consensus        79 -------------~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           79 -------------NGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             -------------CCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             -------------CCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence                         4567899999999998  556665  89999875

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.65  E-value=4.6e-16  Score=135.38  Aligned_cols=107  Identities=22%  Similarity=0.428  Sum_probs=86.9

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      .|+|.+||.|..|+.|  .+|.|.|.|...++      -+.|..      +|.+|+..+  +.++.|+|+.||||+|+|.
T Consensus         3 ~dtL~~gq~L~~g~~L--~~g~~~L~~q~dGN------Lvl~~~------~Wssnt~~~--~~~~~l~l~~dGnLvl~d~   66 (109)
T 3r0e_A            3 TNYLLSGQTLDTEGHL--KNGDFDLVMQDDCN------LVLYNG------NWQSNTANN--GRDCKLTLTDYGELVIKNG   66 (109)
T ss_dssp             CSEEETTCEECTTCEE--EETTEEEEECTTSC------EEEETT------TEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred             cCCcCCCCCcCCCCEe--ECCCEEEEEecCCe------EEEEeC------eEEcCCCCC--CCcEEEEEcCCCeEEEEeC
Confidence            6899999999999999  46999999987765      244542      699998865  2357899999999999999


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCC
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPG  155 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg  155 (649)
                      ++.++|++++.. .....+|+|+|+|||||++    .++|+|     .|.+||
T Consensus        67 ~~~~vWss~t~~-~~~~~~~~L~~dGNlvly~----~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           67 DGSTVWKSGAQS-VKGNYAAVVHPDGRLVVFG----PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TSCEEEECCCCC-SSSCCEEEEETTTEEEEEC----SEEEEE-----CTTSCC
T ss_pred             CCCEEEcCCCcC-CCcCEEEEEcCCCeEEEEe----cCEECC-----CCccCC
Confidence            999999998863 2335689999999999996    479998     555554

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.64  E-value=8.5e-17  Score=170.32  Aligned_cols=138  Identities=14%  Similarity=0.173  Sum_probs=100.1

Q ss_pred             CcccceeeccCCcEEEEEEEecCCcEEEEEEeccccc--------------ccHHH--------HHHHHHHHhcCCCCCc
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG--------------QGLEE--------FMNEVMVISKLQHRNL  539 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~--------------~~~~~--------f~~E~~~l~~l~H~ni  539 (649)
                      -|++.+.||+|+||.||+|...+|+.||||.++....              .....        ..+|...|.++++.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3888999999999999999999999999998753210              00111        2345666666654443


Q ss_pred             cceEEEEEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC
Q 006347          540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE  619 (649)
Q Consensus       540 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~  619 (649)
                      .-...+..  ...+|||||+++++|..+...         .....++.|++.+|.|||+.+   ||||||||.|||++++
T Consensus       176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREE  241 (397)
T ss_dssp             SCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEE
T ss_pred             CCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCC
Confidence            22222222  233799999999888665411         123457899999999999987   9999999999999887


Q ss_pred             C----------ceEEEecCCceee
Q 006347          620 L----------NPKISDFGMAKIF  633 (649)
Q Consensus       620 ~----------~~Ki~DFGla~~~  633 (649)
                      +          .+.|+||+=+...
T Consensus       242 gd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          242 KDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             ECSSCTTSEEEEEEECCCTTCEET
T ss_pred             CCcccccccccceEEEEeCCcccC
Confidence            6          3899999987754

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.61  E-value=2.6e-15  Score=132.70  Aligned_cols=87  Identities=24%  Similarity=0.429  Sum_probs=72.0

Q ss_pred             cceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCC
Q 006347           86 SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTG  165 (649)
Q Consensus        86 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g  165 (649)
                      ..+|.|+.||+|+|++. +++||++++... .....|+|+|+|||||+|. ++.++||||                    
T Consensus        31 ~~~L~~~~dgnlvly~~-~~~vW~sn~~~~-~~~~~l~l~~dGNLVl~d~-~~~~lW~S~--------------------   87 (119)
T 1b2p_A           31 VYRFIMQTDCNLVLYDN-NNPIWATNTGGL-GNGCRAVLQPDGVLVVITN-ENVTVWQSP--------------------   87 (119)
T ss_dssp             EEEEEECTTSCEEEEET-TEEEEECCCTTS-CSSCEEEECTTSCEEEECT-TCCEEEECS--------------------
T ss_pred             CEEEEEecCCCEEEEEC-CEEEEeCCCccC-CCceEEEEccCCEEEEEeC-CCcEEEcCC--------------------
Confidence            35799999999999998 899999998632 3357899999999999985 567999999                    


Q ss_pred             ceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          166 KKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       166 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                 .+|++|.|+++++++|+  +++++  .+||+||+
T Consensus        88 -----------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           88 -----------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             -----------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             -----------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence                       34578899999999998  55555  38999986

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.60  E-value=3.6e-15  Score=131.24  Aligned_cols=91  Identities=26%  Similarity=0.425  Sum_probs=74.9

Q ss_pred             cceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCC
Q 006347           86 SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTG  165 (649)
Q Consensus        86 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g  165 (649)
                      ..+|.|+.||||+|++ .++++|++++... .....++|+++|||||+|. ++.++|||||+                  
T Consensus        21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~-~~~~~l~l~~~GnLvl~d~-~~~~vW~S~~~------------------   79 (115)
T 2dpf_A           21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRR-GSGCRLTLLSDGNLVIYDH-NNNDVWGSACW------------------   79 (115)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECSCTTS-CSSCEEEECTTSCEEEECT-TCCEEEECCCC------------------
T ss_pred             CEEEEEcCCCcEEEEe-CCEEEEeCCCCCC-CCceEEEECCCCcEEEECC-CceEEEEcCCC------------------
Confidence            4679999999999998 5889999998632 2356899999999999985 46799999997                  


Q ss_pred             ceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCCCCc
Q 006347          166 KKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNGQ  214 (649)
Q Consensus       166 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~~~~  214 (649)
                                   +++|.|++.++++|+  +++++.  +||+|++|...
T Consensus        80 -------------~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~~  111 (115)
T 2dpf_A           80 -------------GDNGKYALVLQKDGR--FVIYGP--VLWSLGPNGCR  111 (115)
T ss_dssp             -------------CSSSCCEEEECTTSC--EEEECS--EEECSSTTCBC
T ss_pred             -------------CCCCCEEEEEeCCCe--EEEECC--CEEECCCCCCc
Confidence                         346789999999997  556654  89999999643

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.54  E-value=1.8e-14  Score=125.69  Aligned_cols=104  Identities=11%  Similarity=0.210  Sum_probs=82.7

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      .++|.+||.|..|+.|.  +|.|.|.|...++      -+.|..   .. ||.+|+..+.  ..+.|+|..||||||+|.
T Consensus         2 ~~~l~~gq~L~~g~~L~--~g~~~L~~q~dGn------Lvl~~~---~~-vW~snt~~~~--~~~~l~l~~dGNLVl~~~   67 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQLS--YESAAFVMQGDCN------LVLYNE---AG-GFQSNTHGRG--VDCTLRLNNRGQLEIHSA   67 (111)
T ss_dssp             TTEEETTCEECTTCEEE--ETTEEEEECTTSC------EEEECS---SC-CEECCCTTSC--SSCEEEECTTSCEEEECS
T ss_pred             cCEeCCCCEeCCCCEEe--cCCEEEEEccCCe------EEEECC---CC-EEECCcccCC--cCEEEEEcCCCcEEEEeC
Confidence            37899999999999994  6899999987765      234543   23 9999998763  357899999999999999


Q ss_pred             Cce-EEEEecCcc-cccccccceeecccCeEEeeCCCCceEeee
Q 006347          103 QKE-VLWSSNVSN-LVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus       103 ~~~-~~Wss~~~~-~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      ++. ++|+|++.. ......+|.|+|+|||||++    .++|+|
T Consensus        68 ~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~----~~~W~s  107 (111)
T 3mez_A           68 NSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG----PAIWST  107 (111)
T ss_dssp             SCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC----SEEEEC
T ss_pred             CCCEEEEEeccccCCCCcCEEEEECCCCeEEEec----cCEEcc
Confidence            876 599998642 22335689999999999996    479997

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.38  E-value=1.9e-12  Score=113.25  Aligned_cols=96  Identities=21%  Similarity=0.346  Sum_probs=72.9

Q ss_pred             CCCCCCCCcceEEEeeCCcEEEEcC-CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCC
Q 006347           78 RDNPLKDSSGIITISEDGNLVLVNG-QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGM  156 (649)
Q Consensus        78 r~~pv~~~~~~l~~~~~G~L~l~~~-~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~  156 (649)
                      .+.|+.+...+|.++.||||+|++. .+.++|++++... .....|+|+|+|||||++. ++.++|||=.+         
T Consensus        17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~-~~~~~l~l~~dGNLVl~d~-~~~~iW~S~t~---------   85 (113)
T 3mez_B           17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGR-GQHCFMRLGHSGELDITDD-RLNTVFVSNTV---------   85 (113)
T ss_dssp             TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTS-CSSCEEEECTTSCEEEECT-TSCEEEECSCC---------
T ss_pred             CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccC-CcCEEEEEeCCCcEEEECC-CCCEEEECCCc---------
Confidence            4556665668899999999999998 5899999998632 2356899999999999985 46789998221         


Q ss_pred             cccccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          157 HHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       157 ~l~~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                            ...|.|.+.++.+|+..+  +.  .+.|.||+
T Consensus        86 ----------------------~~~~~~~~~L~~dGnlvl--y~--~~~W~s~~  113 (113)
T 3mez_B           86 ----------------------GQEGDYVLILQINGQAVV--YG--PAVWSTAA  113 (113)
T ss_dssp             ----------------------CSSSCCEEEECTTSCEEE--EC--SEEEESCC
T ss_pred             ----------------------CCCCCEEEEEcCCceEEE--ec--CCEecCCC
Confidence                                  013458889999998544  44  58899875

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.37  E-value=3.8e-12  Score=128.47  Aligned_cols=147  Identities=14%  Similarity=0.045  Sum_probs=116.9

Q ss_pred             HHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEE
Q 006347          477 ATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       477 ~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV  555 (649)
                      ......|+....++.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. |..+.++++++.+.+..++|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            344467877788888888999999865 6899999986432233456889999999884 77889999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD------------------------------------  599 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------  599 (649)
                      |||++|.+|.+.+..        ......++.+++++|+.||+.                                    
T Consensus        89 ~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           89 MSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            999999999876421        112346888999999999981                                    


Q ss_pred             --------------------CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          600 --------------------SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       600 --------------------~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                                          ....++|+|++|.|||++++..+.|+||+.+..
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                114599999999999998876678999999875

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.34  E-value=3.5e-12  Score=111.16  Aligned_cols=96  Identities=23%  Similarity=0.324  Sum_probs=71.3

Q ss_pred             CCCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcc
Q 006347           79 DNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHH  158 (649)
Q Consensus        79 ~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l  158 (649)
                      +.++.+...+|.++.||||||++.++  +|++++... .....|+|+|+|||||++.+...++|||..+           
T Consensus        14 g~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~-~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~-----------   79 (111)
T 3mez_A           14 DNQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGR-GVDCTLRLNNRGQLEIHSANSNTPVWVYPRS-----------   79 (111)
T ss_dssp             TCEEEETTEEEEECTTSCEEEECSSC--CEECCCTTS-CSSCEEEECTTSCEEEECSSCSSCSEEESSS-----------
T ss_pred             CCEEecCCEEEEEccCCeEEEECCCC--EEECCcccC-CcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-----------
Confidence            33444445789999999999999876  999998632 2346899999999999985333469999621           


Q ss_pred             cccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          159 GIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       159 ~~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                        .....|.|.+.++.+|+..+  +.  .++|.+++
T Consensus        80 ------------------~~~~~~~~~l~Lq~dGNlvl--y~--~~~W~s~t  109 (111)
T 3mez_A           80 ------------------VNTVRGNYAATLGPDQHVTI--YG--PAIWSTPA  109 (111)
T ss_dssp             ------------------CCCCSSCCEEEECTTSCEEE--EC--SEEEECCC
T ss_pred             ------------------cCCCCcCEEEEECCCCeEEE--ec--cCEEccCC
Confidence                              11135688999999998554  44  68999875

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.25  E-value=1.2e-11  Score=125.46  Aligned_cols=111  Identities=19%  Similarity=0.317  Sum_probs=85.2

Q ss_pred             cccccCCCC----cCCCCeEEeCCCeeeEeeeCCC--CCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCc
Q 006347           23 DSSITSSQL----IRDPDAILSNGSNFKLGFFNPA--DSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGN   96 (649)
Q Consensus        23 ~~~l~~g~~----l~~~~~l~S~~g~F~lGF~~~~--~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~   96 (649)
                      .|++.||+.    |..|+.|.|+ ..++.|+|...  .....+  + |.+  ..+++|.+++..+-  . ..+.++.+|+
T Consensus       136 tdtlLpg~~~~~~l~~g~~L~S~-~dps~G~fsl~l~~dGnlv--L-y~~--~~~~yW~Sgt~~~~--~-~~l~l~~dGn  206 (276)
T 3m7h_A          136 AIPLVPGAIDSLLLAPGSELVQG-VVYGAGASKLVFQGDGNLV--A-YGP--NGAATWNAGTQGKG--A-VRAVFQGDGN  206 (276)
T ss_dssp             TSCCCCSCTTCEEECSSEEECTT-CEEEETTEEEEECTTSCEE--E-ECT--TSSEEEECCCTTTT--C-CEEEECTTSC
T ss_pred             ccccccccccccccccCcccccC-CCCCCceEEEeecCCceEE--E-EeC--CCeEEEECCCCCCc--c-EEEEEcCCCe
Confidence            799999999    8888888654 56666665531  122333  3 432  25899999998763  2 6899999999


Q ss_pred             EEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCC
Q 006347           97 LVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQE  147 (649)
Q Consensus        97 L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~  147 (649)
                      |+++|.++.++|++++..  ....+|+|+++|||||++.   .++||||||
T Consensus       207 Lvl~d~~~~~vWsS~t~~--~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~  252 (276)
T 3m7h_A          207 LVVYGAGNAVLWHSHTGG--HASAVLRLQANGSIAILDE---KPVWARFGF  252 (276)
T ss_dssp             EEEECTTSCEEEECSCTT--CTTCEEEECTTSCEEEEEE---EEEEESSSC
T ss_pred             EEEEeCCCcEEEEecCCC--CCCEEEEEcCCccEEEEcC---CCeEEccCc
Confidence            999999889999998763  2357899999999999973   579999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.19  E-value=2.5e-11  Score=121.67  Aligned_cols=138  Identities=17%  Similarity=0.159  Sum_probs=104.2

Q ss_pred             cCcccceeec-cCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCC--ccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLG-QGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN--LVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG-~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E  557 (649)
                      .++.+ +.++ .|..+.||+....+|..+++|.....   ....+..|+.+++.+.+.+  +.+++++..+++..++|||
T Consensus        20 ~~~~~-~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           20 FGYDW-AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTCEE-EECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             CCCce-EecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            34444 3454 55569999998877888999987543   3356788999999885434  5678998888888999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS-------------------------------------  600 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------  600 (649)
                      |+++.+|.  ...      .+   ...++.++++.|..||+..                                     
T Consensus        96 ~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           96 EVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             CCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             ecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            99998884  211      12   2357788888888888643                                     


Q ss_pred             ------------------CCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          601 ------------------RLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       601 ------------------~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                                        +..++|+|++|.|||++++..++|+||+.|..-
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                              123999999999999998877789999998864

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.18  E-value=8.1e-11  Score=102.19  Aligned_cols=87  Identities=23%  Similarity=0.449  Sum_probs=66.5

Q ss_pred             cceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCC
Q 006347           86 SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTG  165 (649)
Q Consensus        86 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g  165 (649)
                      ..+|.|+.||||+|++. +.++|++++... .....++|+|+|||||++. ++.++|||....                 
T Consensus        20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~-~~~~~l~l~~dGNLvl~~~-~~~~~W~S~t~~-----------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGL-DRRCHLSMQSDGNLVVYSP-RNNPIWASNTGG-----------------   79 (109)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTS-SSSCEEEECTTSCEEEECT-TSCEEEECCCCC-----------------
T ss_pred             CEEEEEcCCCcEEEEeC-CEEEEECCcccC-CCCEEEEEeCCCCEEEECC-CCCEEEECCCCC-----------------
Confidence            46899999999999988 789999998632 2346899999999999985 457899984311                 


Q ss_pred             ceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          166 KKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       166 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                    ..+.|.+.++.+|+..+  +..  +.|.|++
T Consensus        80 --------------~~~~~~~~L~ddGNlvl--y~~--~~W~s~t  106 (109)
T 3dzw_A           80 --------------ENGNYVCVLQKDRNVVI--YGT--ARWATGT  106 (109)
T ss_dssp             --------------SSSCEEEEECTTSCEEE--EES--CCCCCCC
T ss_pred             --------------CCCCEEEEEeCCCEEEE--ECC--CEEeCCC
Confidence                          12457888999998554  443  7788775

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.15  E-value=9.5e-11  Score=101.83  Aligned_cols=86  Identities=21%  Similarity=0.394  Sum_probs=65.1

Q ss_pred             cceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCC
Q 006347           86 SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTG  165 (649)
Q Consensus        86 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g  165 (649)
                      ...|.++.||||+|++.  .++|++++... .....++|+|+|||||++. ++.++|||-.+-                 
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~-~~~~~l~l~~dGNLvl~d~-~~~~iW~S~t~~-----------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGN-GEHCFLRLNHKGELIIKDD-DFKTIWSSRSSS-----------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTS-SSSCEEEECTTSCEEEECT-TCCEEEECCCCC-----------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCC-CcCEEEEEeCCCcEEEEeC-CCCEEEEcCCcC-----------------
Confidence            46899999999999987  58999998632 2346899999999999985 467899984210                 


Q ss_pred             ceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          166 KKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       166 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                    ..|.|.+.++.+|+..+  +.  .+.|.+|+
T Consensus        84 --------------~~~~~~~~L~~dGNlvl--y~--~~~W~t~~  110 (110)
T 3r0e_B           84 --------------KQGEYVLILQDDGFGVI--YG--PAIFETSS  110 (110)
T ss_dssp             --------------SSSCCEEEECTTSCEEE--EC--SEEEESCC
T ss_pred             --------------CCCCEEEEEcCCccEEE--ec--CCEecCCC
Confidence                          13458888999998544  44  37898864

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.13  E-value=1.5e-10  Score=100.31  Aligned_cols=93  Identities=27%  Similarity=0.511  Sum_probs=69.3

Q ss_pred             CCCCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCc
Q 006347           78 RDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMH  157 (649)
Q Consensus        78 r~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~  157 (649)
                      .+.|+.+....|.++.||||||+++    +|++++... .....++|+++|||||+|. ++.++|+|-.+          
T Consensus        14 ~g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~-~~~~~l~l~~dGnLvl~d~-~~~~vWss~t~----------   77 (109)
T 3r0e_A           14 TEGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANN-GRDCKLTLTDYGELVIKNG-DGSTVWKSGAQ----------   77 (109)
T ss_dssp             TTCEEEETTEEEEECTTSCEEEETT----TEECCCTTS-CSSCEEEECTTSCEEEECT-TSCEEEECCCC----------
T ss_pred             CCCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCC-CCcEEEEEcCCCeEEEEeC-CCCEEEcCCCc----------
Confidence            3445554567899999999999985    799998732 2356899999999999985 45789976210          


Q ss_pred             ccccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCC
Q 006347          158 HGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPW  211 (649)
Q Consensus       158 l~~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~  211 (649)
                                           ...+.|.+.++.+|+..+  +.  .+.|.+++|
T Consensus        78 ---------------------~~~~~~~~~L~~dGNlvl--y~--~~~W~s~t~  106 (109)
T 3r0e_A           78 ---------------------SVKGNYAAVVHPDGRLVV--FG--PSVFKIDPW  106 (109)
T ss_dssp             ---------------------CSSSCCEEEEETTTEEEE--EC--SEEEEECTT
T ss_pred             ---------------------CCCcCEEEEEcCCCeEEE--Ee--cCEECCCCc
Confidence                                 023567899999997544  44  589999987

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.04  E-value=9.8e-10  Score=94.49  Aligned_cols=78  Identities=26%  Similarity=0.356  Sum_probs=60.7

Q ss_pred             ceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           87 GIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        87 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      -+|.++.||||+|++. +++||++++......+..++|.++|||||+|. +++++|+|-.                    
T Consensus        21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~-~~~~vWss~t--------------------   78 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDS-SGRSLWASHS--------------------   78 (105)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECT-TCCEEEECCC--------------------
T ss_pred             EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECC-CcEEEEEecC--------------------
Confidence            5799999999999986 68999999874444456899999999999985 5678998721                    


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEE
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIF  197 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~  197 (649)
                                 ....+.|.+.++.+|+..++
T Consensus        79 -----------~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 -----------TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             -----------CCCSSCEEEEECTTSCEEEE
T ss_pred             -----------CCCCCCEEEEEeCCCeEEEE
Confidence                       11345688899999985543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.04  E-value=9.3e-10  Score=116.33  Aligned_cols=141  Identities=15%  Similarity=0.229  Sum_probs=108.2

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEec--ccc-cccHHHHHHHHHHHhcCC--CCCccceEEEEEeC---CeEEEEEe
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLS--KAS-GQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEG---EEKMLIYE  557 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~--~~~-~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~---~~~~lV~E  557 (649)
                      .+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|+.++..+.  +..++++++++.+.   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            4689999999999998764 678888765  221 123457888999999986  56688999998776   34799999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS-------------------------------------  600 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------  600 (649)
                      |+++..+.+..     ...++..++..++.++++.|+.||...                                     
T Consensus       122 ~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          122 FVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             CCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             ecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            99998874322     124678888999999999999999731                                     


Q ss_pred             ------------------CCceEecCCCCCcEEEcCCCc--eEEEecCCcee
Q 006347          601 ------------------RLRIIHRDLKASNILLDEELN--PKISDFGMAKI  632 (649)
Q Consensus       601 ------------------~~~iiHrDlkp~NILl~~~~~--~Ki~DFGla~~  632 (649)
                                        ...++|+|++|.|||++++..  ++|+||++|..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                              356999999999999997753  69999999986

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.90  E-value=4.8e-09  Score=104.18  Aligned_cols=89  Identities=29%  Similarity=0.409  Sum_probs=69.3

Q ss_pred             cceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCC
Q 006347           86 SGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTG  165 (649)
Q Consensus        86 ~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g  165 (649)
                      .-+|.|..||+|+|++. +++||.+|+.+ . ....++|+++|||||+|. ++++||+|+++                  
T Consensus        27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~-~-~~~~l~l~~dGnLvl~d~-~~~~vW~s~~~------------------   84 (236)
T 1dlp_A           27 SFRFTMQSDCNLVLFDS-DVRVWASNTAG-A-TGCRAVLQSDGLLVILTA-QNTIRWSSGTK------------------   84 (236)
T ss_dssp             TEEEEECTTSCEEEEES-SSEEECCCCCS-C-SCCBCCBCSSSCBCCBCT-TTCCSCCCCCC------------------
T ss_pred             CEEEEECCCCcEEEEEC-CEEEEECCCCC-C-CCeEEEEcCCCcEEEEcC-CCcEEEeCCcc------------------
Confidence            35688889999999987 78999999863 2 567899999999999985 56789999864                  


Q ss_pred             ceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCCCC
Q 006347          166 KKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPWNG  213 (649)
Q Consensus       166 ~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~~~  213 (649)
                                   .++|.|.+.++.+|+..+  +..  .||.|..+..
T Consensus        85 -------------~~~~~~~~~l~d~Gnlvl--~~~--~~W~S~~~p~  115 (236)
T 1dlp_A           85 -------------GSIGNYVLVLQPDRTVTI--YGP--GLWDSGTSNK  115 (236)
T ss_dssp             -------------CCSSCCEEEECSSSCEEE--ECS--EEEECSCCCS
T ss_pred             -------------ccCCcEEEEEeCCCCEEE--ecC--CEEECCCCCC
Confidence                         124567888999988554  332  8999987653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.56  E-value=1.3e-07  Score=97.32  Aligned_cols=136  Identities=21%  Similarity=0.249  Sum_probs=101.1

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCC--ccceEEEEEeCC---eEEEEEecCC
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRN--LVRLLGCCVEGE---EKMLIYEYMP  560 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~n--iv~l~g~~~~~~---~~~lV~Ey~~  560 (649)
                      +.++.|....||+..    ..+++|.....  .....+.+|.+++..+ .+..  +.++++.....+   ..++|||+++
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            568999999999864    45888876432  3456789999999888 3333  455555543333   3479999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-----------------------------------------  599 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----------------------------------------  599 (649)
                      +.+|.+...     ..++..++..++.++++.|+.||..                                         
T Consensus       100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A          100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            988865432     2367778888899999999998861                                         


Q ss_pred             --------------CCCceEecCCCCCcEEEcC--CCceEEEecCCceee
Q 006347          600 --------------SRLRIIHRDLKASNILLDE--ELNPKISDFGMAKIF  633 (649)
Q Consensus       600 --------------~~~~iiHrDlkp~NILl~~--~~~~Ki~DFGla~~~  633 (649)
                                    ..+.++|+|++|.||++++  +..+.|+||+.+..-
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                          1245899999999999998  566899999999874

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.45  E-value=1.6e-06  Score=89.27  Aligned_cols=136  Identities=18%  Similarity=0.143  Sum_probs=97.8

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCC---CccceEEEEE-eCCeEEEEEecCCCC
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHR---NLVRLLGCCV-EGEEKMLIYEYMPNR  562 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~Ey~~~g  562 (649)
                      +.++.|....||+.    +..+++|....  ......+..|..++..+.+.   .+.+.+.++. ..+..++||||++|.
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            56888888899987    56688887532  23456789999999999642   4667777775 344578999999998


Q ss_pred             ChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 006347          563 SLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-------------------------------------------  599 (649)
Q Consensus       563 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------------  599 (649)
                      .|.+....     .++..++..++.++++.|+.||+.                                           
T Consensus        99 ~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           99 ILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             ECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             ECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            88764211     234555556666666666666642                                           


Q ss_pred             --------------CCCceEecCCCCCcEEEcC---CCc-eEEEecCCceee
Q 006347          600 --------------SRLRIIHRDLKASNILLDE---ELN-PKISDFGMAKIF  633 (649)
Q Consensus       600 --------------~~~~iiHrDlkp~NILl~~---~~~-~Ki~DFGla~~~  633 (649)
                                    ....++|+|++|.|||++.   ++. ..|+||+.+..-
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                          2335799999999999997   345 589999998864

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.45  E-value=1.1e-06  Score=88.38  Aligned_cols=137  Identities=18%  Similarity=0.175  Sum_probs=100.1

Q ss_pred             eeeccCCcE-EEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEecCCCCC
Q 006347          487 SKLGQGGFG-PVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       487 ~~LG~G~fG-~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      +.+..|..| .||+.... ++..+.+|+-..   ....++..|...|+.+. +-.+.++++++.+.+..++|||++++.+
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            345556555 68988765 466788887643   24567888999988884 5568899999999999999999999988


Q ss_pred             hhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 006347          564 LDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS-------------------------------------------  600 (649)
Q Consensus       564 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------------  600 (649)
                      +.+....       .......++.++++.|+-||...                                           
T Consensus       107 ~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          107 AFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             HHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             ccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            8765421       11223345666666666666421                                           


Q ss_pred             ------------CCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          601 ------------RLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       601 ------------~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                                  .+.++|+|+.+.|||++++..+-|+||+.+..-
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g  224 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA  224 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence                        123799999999999998887889999999863

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.34  E-value=1.4e-06  Score=91.56  Aligned_cols=147  Identities=10%  Similarity=0.066  Sum_probs=92.1

Q ss_pred             ceee-ccCCcEEEEEEEec-------CCcEEEEEEecccc---cccHHHHHHHHHHHhcCC-C--CCccceEEEEEeC--
Q 006347          486 SSKL-GQGGFGPVYWGRLK-------DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQ-H--RNLVRLLGCCVEG--  549 (649)
Q Consensus       486 ~~~L-G~G~fG~Vykg~~~-------~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~--  549 (649)
                      .+.| +.|....+|+....       +++.+++|......   ......+..|+.++..+. +  ..+.++++++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3577 88889999998765       26678888764322   111246788888888884 3  4578888887665  


Q ss_pred             -CeEEEEEecCCCCChhhhhc---CCCCCCCCCHHHHHHHHHHHHH----------------------------------
Q 006347          550 -EEKMLIYEYMPNRSLDALLF---DPLKKERLDWRKRFNIIEGISR----------------------------------  591 (649)
Q Consensus       550 -~~~~lV~Ey~~~gsL~~~l~---~~~~~~~l~~~~~~~i~~~ia~----------------------------------  591 (649)
                       ...++||||+++..+.+.+.   .......++..++..++.++++                                  
T Consensus       105 ~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~  184 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNW  184 (357)
T ss_dssp             TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHH
T ss_pred             cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHH
Confidence             34689999999877653210   0000001122222222222222                                  


Q ss_pred             --------------------HHHHHHhC-------CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          592 --------------------GLLYLHRD-------SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       592 --------------------gL~yLH~~-------~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                                          .+.+|.+.       ....++|+|+.|.|||++++..+.|+||+.|..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          185 VRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             HHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence                                23334322       145699999999999999655679999999875

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.00  E-value=3.2e-05  Score=82.49  Aligned_cols=75  Identities=11%  Similarity=0.147  Sum_probs=50.9

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEeccccc-------ccHHHHHHHHHHHhcCCC--C-CccceEEEEEeCCeEEE
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-------QGLEEFMNEVMVISKLQH--R-NLVRLLGCCVEGEEKML  554 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~-niv~l~g~~~~~~~~~l  554 (649)
                      .+.||.|.++.||++... +++.++||.......       .....+..|.+++..+.+  + .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            468999999999999765 468899997643211       123456789888887732  3 34466654  4556789


Q ss_pred             EEecCCCC
Q 006347          555 IYEYMPNR  562 (649)
Q Consensus       555 V~Ey~~~g  562 (649)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.99  E-value=2.6e-05  Score=80.88  Aligned_cols=141  Identities=16%  Similarity=0.236  Sum_probs=82.7

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC--CCCccceEE------EEEeCCeEEEEEec
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ--HRNLVRLLG------CCVEGEEKMLIYEY  558 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g------~~~~~~~~~lV~Ey  558 (649)
                      +.|+.|....||+....+| .+++|+....    ..++..|..++..+.  .-.+.+++.      +....+..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            4566667889999987654 5889988642    233444555555442  123344443      22356778999999


Q ss_pred             CCCCChh-----h---------hhc----CC--CC-----CCCCCHHHHH------------------------------
Q 006347          559 MPNRSLD-----A---------LLF----DP--LK-----KERLDWRKRF------------------------------  583 (649)
Q Consensus       559 ~~~gsL~-----~---------~l~----~~--~~-----~~~l~~~~~~------------------------------  583 (649)
                      +++..+.     .         -++    ..  ..     .....|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9986553     0         011    00  00     0112343211                              


Q ss_pred             -HHHHHHHHHHHHHHh----------CCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          584 -NIIEGISRGLLYLHR----------DSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       584 -~i~~~ia~gL~yLH~----------~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                       .+...+.+++.+|++          .....++|+|+++.|||++.+..+.|+||+.+..
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             111224446677763          1245699999999999998888999999999875

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.86  E-value=0.00011  Score=75.56  Aligned_cols=138  Identities=17%  Similarity=0.126  Sum_probs=94.0

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC---CCCccceEEEEEeCCeEEEEEecCCCC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ---HRNLVRLLGCCVEGEEKMLIYEYMPNR  562 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~g  562 (649)
                      .+.|+.|....+|+.... +..+++|+...   .....|..|...|+.|.   ...++++++++...+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDE-VQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEESS-SCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEEC-CCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            468999999999998864 67888887643   23567889999888884   367889999988888999999999987


Q ss_pred             Chhh--------h---hcCCCC-C------------------CCCCHHHHH---HHHH----------------HHHH-H
Q 006347          563 SLDA--------L---LFDPLK-K------------------ERLDWRKRF---NIIE----------------GISR-G  592 (649)
Q Consensus       563 sL~~--------~---l~~~~~-~------------------~~l~~~~~~---~i~~----------------~ia~-g  592 (649)
                      .+..        .   |+.... .                  -.-+|.+.+   ++..                .+.. .
T Consensus       117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l  196 (312)
T 3jr1_A          117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV  196 (312)
T ss_dssp             CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence            6521        1   111100 0                  012565432   1111                1111 1


Q ss_pred             HHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecC
Q 006347          593 LLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFG  628 (649)
Q Consensus       593 L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFG  628 (649)
                      ...|.. ..++.++|+|+.+.|++++.++ +.|.||.
T Consensus       197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            223321 2356799999999999999887 8999984

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.76  E-value=9.6e-05  Score=75.03  Aligned_cols=78  Identities=19%  Similarity=0.234  Sum_probs=58.5

Q ss_pred             cccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-C--CCccceEEEEEeCCeEEEEEecC
Q 006347          483 FQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H--RNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       483 f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H--~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ....+.+|.|..+.||+.++.+|+.+.||+-..........|..|...|+.|. .  .-+++++++  +  ..++||||+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEee
Confidence            44457899999999999999999999999875544444557889999888884 2  235566654  2  347899999


Q ss_pred             CCCCh
Q 006347          560 PNRSL  564 (649)
Q Consensus       560 ~~gsL  564 (649)
                      +.+..
T Consensus        93 ~~~~~   97 (288)
T 3f7w_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            87654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.60  E-value=0.00034  Score=75.15  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=45.8

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEeccc----cc-----ccHHHHHHHHHHHh-cCCCCCccceEEEEEeCCeEEEE
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA----SG-----QGLEEFMNEVMVIS-KLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~----~~-----~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      .+.||.|....||+... +++.++||.....    ..     .....+..|+..+. ...+..+.+++.+.  .+..++|
T Consensus        39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv  115 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG  115 (420)
T ss_dssp             EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred             EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence            46889999999999965 4678999943211    01     12233434433222 22235677777765  5677999


Q ss_pred             EecC-CC
Q 006347          556 YEYM-PN  561 (649)
Q Consensus       556 ~Ey~-~~  561 (649)
                      |||+ ++
T Consensus       116 ~e~l~~g  122 (420)
T 2pyw_A          116 MRYLEPP  122 (420)
T ss_dssp             ECCCCTT
T ss_pred             EeecCCc
Confidence            9999 76

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.50  E-value=0.00078  Score=69.20  Aligned_cols=159  Identities=13%  Similarity=0.106  Sum_probs=89.7

Q ss_pred             CCHHHHHHHhcCccc-----ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-C-CCccceE
Q 006347          471 FQFEELATATNNFQL-----SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-H-RNLVRLL  543 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~-----~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H-~niv~l~  543 (649)
                      .+.+++......|.+     .+.|+.|....+|+....+| .+++|.....  ....++..|+.++..+. | -.+.+++
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~   83 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL   83 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence            444555555555543     24567788889999987755 6778887542  12335566777777663 2 1233444


Q ss_pred             EE------EEeCCeEEEEEecCCCCChhh----h----------hc----CCCCC--CC---CCHHHHHHH---------
Q 006347          544 GC------CVEGEEKMLIYEYMPNRSLDA----L----------LF----DPLKK--ER---LDWRKRFNI---------  585 (649)
Q Consensus       544 g~------~~~~~~~~lV~Ey~~~gsL~~----~----------l~----~~~~~--~~---l~~~~~~~i---------  585 (649)
                      ..      ....+..++++||+++..+..    .          ++    +....  ..   ..|...+.-         
T Consensus        84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  163 (322)
T 2ppq_A           84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  163 (322)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence            21      123456789999999865421    0          11    10000  00   124331110         


Q ss_pred             ---HHHHHHHHHHHHhC----CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          586 ---IEGISRGLLYLHRD----SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       586 ---~~~ia~gL~yLH~~----~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                         ...+.+.+.++++.    .+..++|+|+.+.|||++++..+.|+||+.+..
T Consensus       164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence               11244556666532    234699999999999999876678999998875

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.21  E-value=0.0018  Score=66.88  Aligned_cols=142  Identities=15%  Similarity=0.105  Sum_probs=74.0

Q ss_pred             eeeccCCcEE-EEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC--CCCccceEEEEEeCCeEEEEEecCCCCC
Q 006347          487 SKLGQGGFGP-VYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGEEKMLIYEYMPNRS  563 (649)
Q Consensus       487 ~~LG~G~fG~-Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gs  563 (649)
                      +.|..|.... +|+....++..+++|......   ..++..|+.++..+.  .-.+.+++.+..+.  -+++||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcc
Confidence            4565554444 667765446677777543321   133455666666663  23466777764333  378999997766


Q ss_pred             hhhhhcC---------------------CCC--CCCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 006347          564 LDALLFD---------------------PLK--KERLDWRKRF-------N-------------IIEGISRGLLYLH---  597 (649)
Q Consensus       564 L~~~l~~---------------------~~~--~~~l~~~~~~-------~-------------i~~~ia~gL~yLH---  597 (649)
                      +.+.+..                     ...  ...++.....       .             ....+.+.+..|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            6433311                     000  0111111100       0             0011122223331   


Q ss_pred             hCCCCceEecCCCCCcEEEcCC----CceEEEecCCceee
Q 006347          598 RDSRLRIIHRDLKASNILLDEE----LNPKISDFGMAKIF  633 (649)
Q Consensus       598 ~~~~~~iiHrDlkp~NILl~~~----~~~Ki~DFGla~~~  633 (649)
                      ......++|+|+.+.||+++.+    ..+.|+||+.+..-
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            1234569999999999999875    67999999998863

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.14  E-value=0.0016  Score=66.23  Aligned_cols=139  Identities=14%  Similarity=0.130  Sum_probs=76.2

Q ss_pred             ceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecC-CCCC
Q 006347          486 SSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYM-PNRS  563 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~-~~gs  563 (649)
                      .+.|+.|....+|+.     ..+++|+....... ......|..++..+...++ .+++++  +.+..++|+||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            478989999999998     45788876542211 1123467777777642222 466654  444567899999 6655


Q ss_pred             hhhh------------------hcCCCC--CCCCCH-HHHHHHHH--------------HHHHHHH----HHH-hCCCCc
Q 006347          564 LDAL------------------LFDPLK--KERLDW-RKRFNIIE--------------GISRGLL----YLH-RDSRLR  603 (649)
Q Consensus       564 L~~~------------------l~~~~~--~~~l~~-~~~~~i~~--------------~ia~gL~----yLH-~~~~~~  603 (649)
                      |...                  |+....  ....+. .....+..              .+.+.+.    .|. ......
T Consensus        95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~  174 (301)
T 3dxq_A           95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA  174 (301)
T ss_dssp             CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred             CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence            5310                  111000  000111 11111100              0111111    111 123345


Q ss_pred             eEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          604 IIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       604 iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      ++|+|+.|.||+ .+++.+.|+||..|..-
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            899999999999 66677899999988753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.12  E-value=0.0016  Score=70.19  Aligned_cols=72  Identities=19%  Similarity=0.334  Sum_probs=49.9

Q ss_pred             eeeccCCcEEEEEEEecC--------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCC-ccceEEEEEeCCeEEEEEe
Q 006347          487 SKLGQGGFGPVYWGRLKD--------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN-LVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~--------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~E  557 (649)
                      +.|+.|-...+|+....+        +..+.+|+....  .....+..|..++..+...+ ..++++.+.  +  .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence            578888889999998763        478888877331  12256668999888884333 367777653  2  38999


Q ss_pred             cCCCCCh
Q 006347          558 YMPNRSL  564 (649)
Q Consensus       558 y~~~gsL  564 (649)
                      |+++.+|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9987554

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.10  E-value=0.0044  Score=63.68  Aligned_cols=143  Identities=15%  Similarity=0.164  Sum_probs=84.3

Q ss_pred             eeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCC--CCccceEEE-----EEeCCeEEEEEecC
Q 006347          487 SKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH--RNLVRLLGC-----CVEGEEKMLIYEYM  559 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~-----~~~~~~~~lV~Ey~  559 (649)
                      ..|+ |....||+....+|+.+++|..... .....++..|..++..+..  -.+++++..     ....+..++|||++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 7778999988777778999988532 1245567778888777742  224455443     22345668899999


Q ss_pred             CCCChhh-----h---------hc----CCC--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHh--
Q 006347          560 PNRSLDA-----L---------LF----DPL--KKERLDWRKR----FNI---------------IEGISRGLLYLHR--  598 (649)
Q Consensus       560 ~~gsL~~-----~---------l~----~~~--~~~~l~~~~~----~~i---------------~~~ia~gL~yLH~--  598 (649)
                      ++..+..     .         ++    ...  .....++...    ..+               ...+.+.+..+.+  
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            8755421     0         11    000  1112232211    001               1111122333322  


Q ss_pred             --CCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          599 --DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       599 --~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                        .....++|+|+++.|||++ + .+.|+||+.+..-
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence              1344589999999999999 4 8999999988753

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.08  E-value=0.0062  Score=65.98  Aligned_cols=73  Identities=11%  Similarity=0.064  Sum_probs=47.6

Q ss_pred             eeeccCCcEEEEEEEecC-CcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEecCCCCCh
Q 006347          487 SKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      +.|+.|-...+|+....+ +..+.+|+....... .-.-..|..++..+...++ .++++.+  .+  .+||||+++.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence            678888889999998875 477888876432211 1112578888888864444 5777776  23  259999997655

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.03  E-value=0.0021  Score=67.94  Aligned_cols=141  Identities=18%  Similarity=0.238  Sum_probs=83.9

Q ss_pred             eeeccCCcEEEEEEEec--------CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEe
Q 006347          487 SKLGQGGFGPVYWGRLK--------DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~--------~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +.|..|-...+|+....        +++.+.+|+... .......+.+|..+++.+. +.-..++++++.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            46766777889998875        246888887532 2234566678999888874 3334677766543    29999


Q ss_pred             cCCCCChhhh-----------------hcCC-C-CCCCCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 006347          558 YMPNRSLDAL-----------------LFDP-L-KKERLD--WRKRFNIIEGIS-------------------RGLLYLH  597 (649)
Q Consensus       558 y~~~gsL~~~-----------------l~~~-~-~~~~l~--~~~~~~i~~~ia-------------------~gL~yLH  597 (649)
                      |+++..|..-                 |+.. . -.....  |.+..++..++.                   +.+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665321                 1111 0 011122  344444443332                   1233332


Q ss_pred             ----h-CCCCceEecCCCCCcEEEcCC----CceEEEecCCcee
Q 006347          598 ----R-DSRLRIIHRDLKASNILLDEE----LNPKISDFGMAKI  632 (649)
Q Consensus       598 ----~-~~~~~iiHrDlkp~NILl~~~----~~~Ki~DFGla~~  632 (649)
                          . .....++|+|+.+.|||++++    ..+.|+||..|..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                2 233469999999999999876    7899999999875

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.69  E-value=0.0036  Score=65.71  Aligned_cols=73  Identities=16%  Similarity=0.159  Sum_probs=44.0

Q ss_pred             eeeccCCcEEEEEEEecC---------CcEEEEEEecccccccHHHHHHHHHHHhcCCCCC-ccceEEEEEeCCeEEEEE
Q 006347          487 SKLGQGGFGPVYWGRLKD---------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN-LVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~---------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~  556 (649)
                      +.|+.|..-.+|+....+         +..+++|....... .......|..++..+...+ ..++++..  .  -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            567778788999998763         26788887643221 1123457888888774333 45777553  2  36899


Q ss_pred             ecCCCCCh
Q 006347          557 EYMPNRSL  564 (649)
Q Consensus       557 Ey~~~gsL  564 (649)
                      ||+++..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987654

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.65  E-value=0.013  Score=60.81  Aligned_cols=33  Identities=24%  Similarity=0.383  Sum_probs=29.1

Q ss_pred             CCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       601 ~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +..++|+|+.+.||++++++.+.|+||+.+..-
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            356999999999999998888999999988764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=94.01  E-value=0.24  Score=52.80  Aligned_cols=140  Identities=17%  Similarity=0.181  Sum_probs=83.4

Q ss_pred             eeeccCCcEEEEEEEecC--------CcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEe
Q 006347          487 SKLGQGGFGPVYWGRLKD--------GQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~--------g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +.|..|-...+|+....+        +..+.+|+...... ..-.-.+|..+++.+. +.-..++++.+  .  .++|||
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence            567777788999998763        57888887643221 1122356777777774 33345666533  2  378999


Q ss_pred             cCCCCChhhh-h----------------cC--C-----C---CCCCCCHHHHHHHHHHH-------------------HH
Q 006347          558 YMPNRSLDAL-L----------------FD--P-----L---KKERLDWRKRFNIIEGI-------------------SR  591 (649)
Q Consensus       558 y~~~gsL~~~-l----------------~~--~-----~---~~~~l~~~~~~~i~~~i-------------------a~  591 (649)
                      |+++..|..- +                +.  .     .   ...+.-|....++..++                   .+
T Consensus       151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  230 (424)
T 3mes_A          151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE  230 (424)
T ss_dssp             CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred             EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence            9998765210 0                10  0     0   11111244333333221                   22


Q ss_pred             HHHHHHh---------------------CCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          592 GLLYLHR---------------------DSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       592 gL~yLH~---------------------~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      .+.+|.+                     .....++|+|+.+.||+ +++..+.|+||..|..
T Consensus       231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            3333321                     12345899999999999 8888999999999875

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=92.18  E-value=0.13  Score=40.97  Aligned_cols=33  Identities=24%  Similarity=0.527  Sum_probs=28.4

Q ss_pred             CCChhHHHHHhhccCCeEEEEecCC-ceEEEeec
Q 006347          357 PATEDECREQCLKNCSCIAYAFDGG-IGCMVWRS  389 (649)
Q Consensus       357 ~~~~~~C~~~Cl~nCsC~a~~~~~g-~gC~~w~~  389 (649)
                      ..++++|+++|+.+=.|.||.|+.- ..|+++.+
T Consensus        29 ~~sl~~Cq~aC~a~~~C~aFTyN~~s~~CflKs~   62 (82)
T 2ll3_A           29 ASSLSECRARCQAEKECSHYTYNVKSGLCYPKRG   62 (82)
T ss_dssp             CSSHHHHHHHHHHCTTEEEEEEETTTTEEEEEES
T ss_pred             CCCHHHHHHHhhccCCCCeEEeccCCCceEcccC
Confidence            4689999999999999999999843 44999876

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=89.22  E-value=1.3  Score=46.70  Aligned_cols=30  Identities=30%  Similarity=0.424  Sum_probs=25.7

Q ss_pred             ceEecCCCCCcEEE------cCCCceEEEecCCcee
Q 006347          603 RIIHRDLKASNILL------DEELNPKISDFGMAKI  632 (649)
Q Consensus       603 ~iiHrDlkp~NILl------~~~~~~Ki~DFGla~~  632 (649)
                      .++|+|+.+.|||+      +++..++++||-.|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            35799999999999      4567799999999875

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=81.61  E-value=0.17  Score=54.77  Aligned_cols=60  Identities=8%  Similarity=0.080  Sum_probs=18.6

Q ss_pred             ceeeccCCcEEEEEEEecC-CcEEEE------EEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 006347          486 SSKLGQGGFGPVYWGRLKD-GQEIAV------KRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE  548 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~-g~~vAV------K~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~  548 (649)
                      .++||   ||.||+|.+.. ..+|||      |+....  .....+.|.+|..++..++|+|+++.+++...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            35676   99999999874 468888      766432  23344678899999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	649
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-49
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-46
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-46
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-46
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-45
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-44
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-44
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-44
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-44
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-43
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-43
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-43
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-42
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-42
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-41
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-41
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-41
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-40
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-40
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-40
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-39
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-38
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-38
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-38
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-38
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-38
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-37
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-37
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-37
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-36
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-36
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-36
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-35
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-35
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-35
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-35
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-33
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-33
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-33
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-33
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-33
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-32
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-32
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-31
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-30
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-30
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-29
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-29
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-29
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-28
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-28
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-28
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-28
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-27
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-27
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-27
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-27
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-25
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-25
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-24
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-23
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-22
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-18
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	6e-18
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	9e-16
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	4e-04
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	7e-15
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	2e-10
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	1e-09
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	8e-05
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	2e-09

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 2e-49
 Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 6/169 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
               +  ++G G FG VY G+      + +  ++  + Q L+ F NEV V+ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
             +G      +  ++ ++    SL   L     + + +  K  +I    ++G+ YLH  S
Sbjct: 68  LFMGYS-TAPQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAKS 124

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
              IIHRDLK++NI L E+L  KI DFG+A +           ++ G++
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 3e-46
 Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 7/167 (4%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGL-EEFMNEVMVISKLQH 536
             ++F+  S+LG G  G V+    K  G  +A K +       +  + + E+ V+ +   
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             +V   G      E  +  E+M   SLD +L    K  R+  +    +   + +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
               + +I+HRD+K SNIL++     K+ DFG++     +   +  G
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 3e-46
 Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 7/169 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L  +LG G FG V+ G      ++AVK L + S    + F+ E  ++ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           RL     + E   +I EYM N SL   L  P    +L   K  ++   I+ G+ ++   +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN 129

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               IHRDL+A+NIL+ + L+ KI+DFG+A++   N+  A  G     +
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPI 174

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 9e-46
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 6/164 (3%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
            + +++  +LG G FG VY  + K+     A K +   S + LE++M E+ +++   H N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+LL          ++ E+    ++DA++ +   +  L   +   + +     L YLH 
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLH- 127

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
               +IIHRDLKA NIL   + + K++DFG++        + D+
Sbjct: 128 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 169

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  160 bits (405), Expect = 4e-45
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 6/180 (3%)

Query: 467 DLPLFQFEELATATNNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFM 525
           D     +++      +  +  KLG G +G VY G  K     +AVK L + + + +EEF+
Sbjct: 3   DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 61

Query: 526 NEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNI 585
            E  V+ +++H NLV+LLG C       +I E+M   +L   L +   ++ +       +
Sbjct: 62  KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYM 120

Query: 586 IEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
              IS  + YL    +   IHRDL A N L+ E    K++DFG++++  G+   A  G  
Sbjct: 121 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 2e-44
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 7/169 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            +     +LG G FG V +G+ +   ++A+K + + S    +EF+ E  V+  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C +     +I EYM N  L   L +   + R   ++   + + +   + YL    
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK- 119

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
             + +HRDL A N L++++   K+SDFG+++    ++  +  G     +
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-SKFPV 165

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  158 bits (400), Expect = 4e-44
 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 16/171 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG---LEEFMNEVMVISKLQHRN 538
           F    ++G G FG VY+ R +++ + +A+K++S +  Q     ++ + EV  + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
            ++  GC +      L+ EY    + D L    + K+ L   +   +  G  +GL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH- 132

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
                +IHRD+KA NILL E    K+ DFG A I       A     VGT 
Sbjct: 133 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGTP 175

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 8e-44
 Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 474 EELATATNNFQLSS-KLGQGGFGPVYWGRLK---DGQEIAVKRLSKASGQG-LEEFMNEV 528
           ++L    +N  ++  +LG G FG V  G  +      ++A+K L + + +   EE M E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 529 MVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEG 588
            ++ +L +  +VRL+G C + E  ML+ E      L   L    K+E +       ++  
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQ 117

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD-TGRVVG 647
           +S G+ YL        +HRDL A N+LL      KISDFG++K  G +            
Sbjct: 118 VSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 174

Query: 648 TL 649
            L
Sbjct: 175 PL 176

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  156 bits (396), Expect = 9e-44
 Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 19/191 (9%)

Query: 471 FQFEELATATNNF---------QLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKA- 516
           F FE+   A   F         ++   +G G FG V  G LK        +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 517 SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKER 576
           + +   +F++E  ++ +  H N++ L G   +    M+I E+M N SLD+ L       +
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQ 124

Query: 577 LDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
               +   ++ GI+ G+ YL     +  +HRDL A NIL++  L  K+SDFG+++    +
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181

Query: 637 QDQADTGRVVG 647
                    +G
Sbjct: 182 TSDPTYTSALG 192

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (389), Expect = 3e-43
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 7/169 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           +      ++G G FG V+ G   +  ++A+K + +      E+F+ E  V+ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L G C+E     L++E+M +  L   L    ++          +   +  G+ YL    
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLE--- 118

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
              +IHRDL A N L+ E    K+SDFGM +    +Q    +      +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPV 166

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (390), Expect = 4e-43
 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 8/171 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRN 538
            ++ L   LG+G +G V     +   + +AVK +         E    E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+  G   EG  + L  EY     L   +        +           +  G++YLH 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG 121

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
              + I HRD+K  N+LLDE  N KISDFG+A +F  N  +    ++ GTL
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  153 bits (389), Expect = 4e-43
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 8/169 (4%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRN 538
           ++++   +G G +G     R K DG+ +  K L   S      +  ++EV ++ +L+H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 539 LVRLLGCCVEGEEKML--IYEYMPNRSLDALLFDPLK-KERLDWRKRFNIIEGISRGLLY 595
           +VR     ++     L  + EY     L +++    K ++ LD      ++  ++  L  
Sbjct: 65  IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124

Query: 596 LHR--DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            HR  D    ++HRDLK +N+ LD + N K+ DFG+A+I   +   A  
Sbjct: 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA 173

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  153 bits (387), Expect = 2e-42
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 31/206 (15%)

Query: 472 QFEELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSK-ASGQGLEEF 524
           +   L    NN +    +G+G FG V+  R            +AVK L + AS     +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 525 MNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFD-------------- 570
             E  ++++  + N+V+LLG C  G+   L++EYM    L+  L                
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 571 -------PLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPK 623
                        L   ++  I   ++ G+ YL      + +HRDL   N L+ E +  K
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVK 180

Query: 624 ISDFGMAKIFGGNQDQADTGRVVGTL 649
           I+DFG+++           G     +
Sbjct: 181 IADFGLSRNIYSADYYKADGNDAIPI 206

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 7e-42
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 8/163 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
              +L   +G+G FG V  G  + G ++AVK +   +    + F+ E  V+++L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63

Query: 541 RLLGCCVEGEEKM-LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +LLG  VE +  + ++ EYM   SL   L     +  L           +   + YL  +
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN 122

Query: 600 SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
                +HRDL A N+L+ E+   K+SDFG+ K     QD    
Sbjct: 123 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 162

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 1e-41
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + +L  KLGQG FG V+ G       +A+K L   +    E F+ E  V+ KL+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
           +L       E   ++ EYM   SL   L      + L   +  ++   I+ G+ Y+ R  
Sbjct: 76  QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER-- 131

Query: 601 RLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
            +  +HRDL+A+NIL+ E L  K++DFG+A++   N+  A  G   
Sbjct: 132 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 176

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 1e-41
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 17/180 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
               L   +G+G FG V+ G+ + G+E+AVK  S    +       E+     L+H N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERS-WFREAEIYQTVMLRHENIL 60

Query: 541 RLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             +    +         L+ +Y  + S    LFD L +  +       +    + GL +L
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGS----LFDYLNRYTVTVEGMIKLALSTASGLAHL 116

Query: 597 HRD-----SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD--TGRVVGTL 649
           H +      +  I HRDLK+ NIL+ +     I+D G+A       D  D      VGT 
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 7e-41
 Identities = 51/191 (26%), Positives = 70/191 (36%), Gaps = 26/191 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQG-LEEFMNEVMVISK 533
           N       LG G FG V                +AVK L  ++     E  M+E+ V+S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKE---------------RL 577
           L  H N+V LLG C  G   ++I EY     L   L                       L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           D     +    +++G+ +L        IHRDL A NILL      KI DFG+A+    + 
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199

Query: 638 DQADTGRVVGT 648
           +    G     
Sbjct: 200 NYVVKGNARLP 210

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 1e-40
 Identities = 46/197 (23%), Positives = 74/197 (37%), Gaps = 31/197 (15%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKASGQG-LEEFMNEVMVISK 533
            N +    LG G FG V               ++AVK L + +     E  M+E+ ++++
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 534 L-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKK------------------ 574
           L  H N+V LLG C       LI+EY     L   L    +K                  
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 575 --ERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKI 632
               L +         +++G+ +L        +HRDL A N+L+      KI DFG+A+ 
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARD 213

Query: 633 FGGNQDQADTGRVVGTL 649
              + +    G     +
Sbjct: 214 IMSDSNYVVRGNARLPV 230

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 5e-40
 Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 10/171 (5%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN 538
              +    K+GQG  G VY    +  GQE+A+++++       E  +NE++V+ + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V  L   + G+E  ++ EY+   S    L D + +  +D  +   +     + L +LH 
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECLQALEFLH- 133

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
               ++IHRD+K+ NILL  + + K++DFG        Q +  T  +VGT 
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTP 180

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 5e-40
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 14/173 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
            +F++   LG+G FG VY  R K     +A+K L KA         +   EV + S L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            N++RL G   +     LI EY P  ++   L    K  + D ++    I  ++  L Y 
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYC 122

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           H     R+IHRD+K  N+LL      KI+DFG +     ++       + GTL
Sbjct: 123 HS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTL 168

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 5e-39
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 16/175 (9%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRNL 539
            +   ++G+G F  VY G   +   E+A   L     +    + F  E  ++  LQH N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 540 VRLLGCCVEGEEK----MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           VR         +     +L+ E M + +L   L    + + +  +   +    I +GL +
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQF 127

Query: 596 LHRDSRLRIIHRDLKASNILLDEELN-PKISDFGMAKIFGGNQDQADTGRVVGTL 649
           LH  +   IIHRDLK  NI +       KI D G+A +   +        V+GT 
Sbjct: 128 LHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTP 177

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 1e-38
 Identities = 51/175 (29%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSK---ASGQGLEEFMNEVMVISK 533
            + +L  KLG G FG V  G           +AVK L     +  + +++F+ EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           L HRNL+RL G  +    KM + E  P  SL   L     +              ++ G+
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGM 124

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            YL      R IHRDL A N+LL      KI DFG+ +    N D          
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  144 bits (363), Expect = 1e-38
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 8/160 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           +++ +  +LG G FG V+       G   A K +        E    E+  +S L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           V L     +  E ++IYE+M    L   + D  +  ++   +    +  + +GL ++H  
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH-- 141

Query: 600 SRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
                +H DLK  NI+   + +   K+ DFG+       Q
Sbjct: 142 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 180

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 1e-38
 Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 13/168 (7%)

Query: 488 KLGQGGFGPVYWGRLKD---GQEIAVKRLSKASGQG--LEEFMNEVMVISKLQHRNLVRL 542
           +LG G FG V  G  +     + +AVK L   +      +E + E  V+ +L +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 543 LGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRL 602
           +G C E E  ML+ E      L+  L    +   +  +    ++  +S G+ YL      
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEES--- 126

Query: 603 RIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG-RVVGTL 649
             +HRDL A N+LL  +   KISDFG++K    +++           +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (360), Expect = 2e-38
 Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHR 537
              +   S +G+G +G V       +   +A+K++S    Q   +  + E+ ++ + +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N++ +         + +   Y+    + A L+  LK + L        +  I RGL Y+H
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
                 ++HRDLK SN+LL+   + KI DFG+A++   + D    
Sbjct: 127 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 168

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 8e-38
 Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 24/187 (12%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDG---QEIAVKRLSK-ASGQGLEEFMNEVMVISKL-Q 535
           N+ +    +G+G FG V   R+K      + A+KR+ + AS     +F  E+ V+ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALL-------------FDPLKKERLDWRKR 582
           H N++ LLG C       L  EY P+ +L   L                     L  ++ 
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 583 FNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
            +    ++RG+ YL +    + IHRDL A NIL+ E    KI+DFG+++   G +     
Sbjct: 130 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 183

Query: 643 GRVVGTL 649
                 +
Sbjct: 184 TMGRLPV 190

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 1e-37
 Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 10/170 (5%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHR 537
           +F+    LG+G F  V   R L   +E A+K L K        +     E  V+S+L H 
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
             V+L     + E+      Y  N  L   +    K    D          I   L YLH
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLH 125

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVG 647
                 IIHRDLK  NILL+E+++ +I+DFG AK+      QA     VG
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  140 bits (353), Expect = 3e-37
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 8/160 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           + + +  +LG G FG V+       G+    K ++           NE+ ++++L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           + L     +  E +LI E++    L   +    +  ++   +  N +     GL ++H  
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMH-- 144

Query: 600 SRLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQ 637
               I+H D+K  NI+ + +     KI DFG+A     ++
Sbjct: 145 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 183

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 4e-37
 Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 12/173 (6%)

Query: 483 FQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRLSKA-SGQGLEEFMNEVMVISKLQH 536
           F+    LG G FG VY G      E     +A+K L +A S +  +E ++E  V++ + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
            ++ RLLG C+      LI + MP   L  L +    K+ +  +   N    I++G+ YL
Sbjct: 71  PHVCRLLGICLTSTV-QLITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
                 R++HRDL A N+L+    + KI+DFG+AK+ G  + +         +
Sbjct: 128 ED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (345), Expect = 1e-36
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 17/182 (9%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSK-ASGQGLEEFMNEVMVISK 533
               +S +LGQG FG VY G  K          +A+K +++ AS +   EF+NE  V+ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------DPLKKERLDWRKRFNII 586
               ++VRLLG   +G+  ++I E M    L + L        +          K   + 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVV 646
             I+ G+ YL+ +   + +HRDL A N ++ E+   KI DFGM +           G+ +
Sbjct: 140 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

Query: 647 GT 648
             
Sbjct: 197 LP 198

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  137 bits (347), Expect = 2e-36
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 13/170 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQ- 535
           N+F +   +G+GGFG VY  R  D G+  A+K L K      QG    +NE +++S +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 536 --HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
                +V +       ++   I + M    L   L    +               I  GL
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGL 120

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTG 643
            ++H      +++RDLK +NILLDE  + +ISD G+A  F   +  A  G
Sbjct: 121 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 167

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 4e-36
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 13/174 (7%)

Query: 484 QLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQG-LEEFMNEVMVISKLQHRN 538
             +  +G+G FG VY G L D        AVK L++ +  G + +F+ E +++    H N
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89

Query: 539 LVRLLGCCVEGEEK-MLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           ++ LLG C+  E   +++  YM +  L   + +      +     F +          + 
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK-----GMK 144

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR--VVGTL 649
             +  + +HRDL A N +LDE+   K++DFG+A+     +  +   +      +
Sbjct: 145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 1e-35
 Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 12/173 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKASGQGL-EEFMNEVMVISKLQ 535
              +L   +G+G FG V+ G           +A+K     +   + E+F+ E + + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H ++V+L+G   E     +I E      L + L    +K  LD          +S  L Y
Sbjct: 67  HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAY 123

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           L      R +HRD+ A N+L+      K+ DFG+++    +       +    
Sbjct: 124 LES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-ASKGKLP 172

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 2e-35
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 25/191 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASGQG-LEEFMNEVMVISK 533
           +  +L   LG+G FG V              + +AVK L + +        M+E+ ++  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 534 -LQHRNLVRLLGCCVE-GEEKMLIYEYMPNRSLDALLF-------------DPLKKERLD 578
              H N+V LLG C + G   M+I E+    +L   L              + L K+ L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 579 WRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD 638
                     +++G+ +L      + IHRDL A NILL E+   KI DFG+A+    + D
Sbjct: 133 LEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 639 QADTGRVVGTL 649
               G     L
Sbjct: 190 YVRKGDARLPL 200

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 5e-35
 Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 11/168 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQE-----IAVKRLSKASGQG-LEEFMNEVMVISKL 534
           +       +G G FG VY G LK         +A+K L     +    +F+ E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
            H N++RL G   + +  M+I EYM N +LD  L +  K       +   ++ GI+ G+ 
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMK 124

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
           YL     +  +HRDL A NIL++  L  K+SDFG++++   + +   T
Sbjct: 125 YLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  132 bits (333), Expect = 6e-35
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
            +FQ+   LG G FG V+  R + +G+  A+K L K      + +E   +E +++S + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             ++R+ G   + ++  +I +Y+    L +LL    +      +     +       L L
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV------CLAL 117

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
                  II+RDLK  NILLD+  + KI+DFG AK      
Sbjct: 118 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  127 bits (320), Expect = 1e-33
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%)

Query: 482 NFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGL---------EEFMNEVMVI 531
           N++    LG+G    V         +E AVK +    G            E  + EV ++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 532 SKLQ-HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGIS 590
            K+  H N+++L           L+++ M    L   L    +K  L  ++   I+  + 
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRALL 120

Query: 591 RGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
             +  LH+   L I+HRDLK  NILLD+++N K++DFG +      +       V GT
Sbjct: 121 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGT 172

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  127 bits (320), Expect = 2e-33
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 8/164 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQGLEEFMNEVMVISKLQHRN 538
             +    K+G+G +G VY  +   G+  A+K  RL K         + E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+L       +  +L++E++       L      +  L+     + +  +  G+ Y H 
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCH- 117

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
               R++HRDLK  N+L++ E   KI+DFG+A+ FG    +   
Sbjct: 118 --DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 3e-33
 Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
            + ++  LG+G FG V+        +    K + K  G        E+ +++  +HRN++
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNIL 64

Query: 541 RLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS 600
            L       EE ++I+E++    +   +        L+ R+  + +  +   L +LH   
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLH--- 119

Query: 601 RLRIIHRDLKASNILLDEELNP--KISDFGMAKIFGGNQD 638
              I H D++  NI+     +   KI +FG A+      +
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 7e-33
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 15/169 (8%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLV 540
           ++  +  +G G FG VY  +L D G+ +A+K++ +           E+ ++ KL H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76

Query: 541 RLLGCCVEGEEKM------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           RL        EK       L+ +Y+P             K+ L        +  + R L 
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 595 YLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGGNQDQADT 642
           Y+H      I HRD+K  N+LLD +    K+ DFG AK     +     
Sbjct: 137 YIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (316), Expect = 7e-33
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 26/192 (13%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK--------DGQEIAVKRLSK-ASGQGLEEFMNEVMVI 531
           +   L   LG+G FG V                 ++AVK L   A+ + L + ++E+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 532 SKL-QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLF-------------DPLKKERL 577
             + +H+N++ LLG C +     +I EY    +L   L                  +E+L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 578 DWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
             +   +    ++RG+ YL      + IHRDL A N+L+ E+   KI+DFG+A+      
Sbjct: 133 SSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 638 DQADTGRVVGTL 649
               T      +
Sbjct: 190 YYKKTTNGRLPV 201

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  125 bits (314), Expect = 2e-32
 Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 14/175 (8%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE-FMNEVMVISKLQHR 537
            + +     LG G F  V      +  + +A+K ++K + +G E    NE+ V+ K++H 
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+V L      G    LI + +    L   +   ++K     R    +I  +   + YLH
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLH 124

Query: 598 RDSRLRIIHRDLKASNILL---DEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
                 I+HRDLK  N+L    DE+    ISDFG++K+              GT 
Sbjct: 125 DL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTP 173

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  123 bits (309), Expect = 4e-32
 Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 15/178 (8%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG---LEEFMNEVMVISKLQ 535
           ++ ++L   LG GG   V+  R L+  +++AVK L     +       F  E    + L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 536 HRNLVRLLGCCVE----GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           H  +V +          G    ++ EY+   +L  ++     +  +  ++   +I    +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQ 122

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQAD-TGRVVGT 648
            L + H+     IIHRD+K +NI++      K+ DFG+A+    + +    T  V+GT
Sbjct: 123 ALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 1e-31
 Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK---ASGQGLEEFMNEVMVISK-LQ 535
            +F L   LG+G FG V+    K   Q  A+K L K        +E  M E  V+S   +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 536 HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
           H  L  +       E    + EY+    L   +       + D  +       I  GL +
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQF 118

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           LH      I++RDLK  NILLD++ + KI+DFGM K       + +T    GT
Sbjct: 119 LHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGT 166

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 6e-30
 Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 19/182 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQG--LEEFMNEVMVISKLQHR 537
           + ++  +K+GQG FG V+  R  K GQ++A+K++   + +       + E+ ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 538 NLVRLLGCCVEGEEKM--------LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGI 589
           N+V L+  C               L++++  +     L    +K    + ++   ++   
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML--- 126

Query: 590 SRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGR--VVG 647
              L  L+   R +I+HRD+KA+N+L+  +   K++DFG+A+ F   ++         V 
Sbjct: 127 ---LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 648 TL 649
           TL
Sbjct: 184 TL 185

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 7e-30
 Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%)

Query: 482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHRN 538
           NFQ   K+G+G +G VY  R K  G+ +A+K++     +       + E+ ++ +L H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 539 LVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +V+LL       +  L++E++          D      +      + +  + +GL + H 
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120

Query: 599 DSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADT 642
               R++HRDLK  N+L++ E   K++DFG+A+ FG        
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 1e-29
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 488 KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEE-----FMNEVMVISKLQHRNLVR 541
            LG+G F  VY  R K   Q +A+K++        ++      + E+ ++ +L H N++ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 542 LLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSR 601
           LL          L++++M                 L        +    +GL YLH+   
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEV---IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-- 119

Query: 602 LRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
             I+HRDLK +N+LLDE    K++DFG+AK FG     
Sbjct: 120 -WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 3e-29
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 16/181 (8%)

Query: 479 ATNNFQLSSKLGQGGFGPVYWGRLK--DGQEIAVKRLSKASGQG--LEEFMNEVMVISKL 534
           A   ++  +++G+G +G V+  R     G+ +A+KR+   +G+       + EV V+  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 535 ---QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLD---ALLFDPLKKERLDWRKRFNIIEG 588
              +H N+VRL   C            +    +D       D + +  +      +++  
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 589 ISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT 648
           + RGL +LH     R++HRDLK  NIL+      K++DFG+A+I+           VV T
Sbjct: 125 LLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL---TSVVVT 178

Query: 649 L 649
           L
Sbjct: 179 L 179

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 5e-29
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 12/173 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQH 536
           N+F     LG+G FG V   R K  G+  A+K L K    +   +   + E  V+   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             L  L       +    + EY     L   L    ++      +       I   L YL
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYL 121

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL 649
           H      +++RD+K  N++LD++ + KI+DFG+ K   G  D A      GT 
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTP 169

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 2e-28
 Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 7/160 (4%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK--ASGQGLEEFMNEVMVISKLQHR 537
             ++    +G G +G V      + G ++A+K+L +   S    +    E+ ++  ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 538 NLVRLLGCCVEGEEKMLIYE-YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           N++ LL      E      + Y+    +   L   +K E+L   +   ++  + +GL Y+
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN 636
           H      IIHRDLK  N+ ++E+   KI DFG+A+     
Sbjct: 138 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (286), Expect = 2e-28
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 10/161 (6%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSK---ASGQGLEEFMNEVMVISKLQH 536
           + F     LG G FG V   +  + G   A+K L K      + +E  +NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 537 RNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
             LV+L     +     ++ EY+    + + L    +  R            I     YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157

Query: 597 HRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           H    L +I+RDLK  N+L+D++   +++DFG AK   G  
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 6e-28
 Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 19/178 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEE------FMNEVMVISK 533
           + +Q+   LG GGFG VY G  + D   +A+K + K       E         EV+++ K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 534 LQ--HRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           +      ++RLL      +  +LI E               ++  L      +    +  
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLE 121

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGGNQDQADTGRVVGT 648
            + + H      ++HRD+K  NIL+D      K+ DFG   +              GT
Sbjct: 122 AVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGT 172

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  111 bits (278), Expect = 9e-28
 Identities = 29/180 (16%), Positives = 69/180 (38%), Gaps = 18/180 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
            ++++  ++G+G FG ++ G  L + Q++A+K   + S     +  +E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 540 VRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD 599
           +  +    +     ++   +   SL+ LL       +   +      + +   +  +H  
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIH-- 118

Query: 600 SRLRIIHRDLKASNILLDEELNP-----KISDFGMAKIF-----GGNQDQADTGRVVGTL 649
               +++RD+K  N L+    +       + DFGM K +       +    +   + GT 
Sbjct: 119 -EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (274), Expect = 2e-27
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHR 537
             ++   K+G+G +G V+  + +   + +A+KR+             + E+ ++ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 538 NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLH 597
           N+VRL       ++  L++E+          +       LD     + +  + +GL + H
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKK---YFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 598 RDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
                 ++HRDLK  N+L++     K+++FG+A+ FG     
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 4e-27
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 20/179 (11%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS------GQGLEEFMNEVMVISK 533
           + +    +LG G F  V   R K  G + A K + K        G   E+   EV ++ +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 534 LQHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           +QH N++ L        + +LI E +       L     +KE L   +    ++ I  G+
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAG---GELFDFLAEKESLTEEEATEFLKQILNGV 126

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNP----KISDFGMAKIFGGNQDQADTGRVVGT 648
            YLH    L+I H DLK  NI+L +   P    KI DFG+A          +   + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGT 179

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 4e-27
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 19/169 (11%)

Query: 481 NNFQLSSK-LGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHR 537
           ++++++S+ LG G  G V      +  ++ A+K L         +   EV +  +  Q  
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65

Query: 538 NLVRLLGCC----VEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGL 593
           ++VR++          +  +++ E +    L + + D    +    R+   I++ I   +
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAI 124

Query: 594 LYLHRDSRLRIIHRDLKASNILLDEELNP---KISDFGMAKIFGGNQDQ 639
            YLH    + I HRD+K  N+L   +      K++DFG AK    +   
Sbjct: 125 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 170

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (272), Expect = 6e-27
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 18/179 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL 539
           N ++L  K+G G FG +Y G  +  G+E+A+K     +     +   E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 540 VRLLG-CCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR 598
           +  +  C  EG+  +++ E +     D          +   +    + + +   + Y+H 
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLED---LFNFCSRKFSLKTVLLLADQMISRIEYIH- 120

Query: 599 DSRLRIIHRDLKASNIL---LDEELNPKISDFGMAKIFGGNQDQAD-----TGRVVGTL 649
                 IHRD+K  N L     +     I DFG+AK +   +            + GT 
Sbjct: 121 --SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 177

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  106 bits (264), Expect = 1e-25
 Identities = 35/164 (21%), Positives = 76/164 (46%), Gaps = 17/164 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRN 538
           +++QL  KLG+G +  V+    + + +++ VK L        ++   E+ ++  L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91

Query: 539 LVRLLGCCVEGEEKM--LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYL 596
           ++ L     +   +   L++E++ N     L       + L        +  I + L Y 
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYC 145

Query: 597 HRDSRLRIIHRDLKASNILLDEE-LNPKISDFGMAKIFGGNQDQ 639
           H    + I+HRD+K  N+++D E    ++ D+G+A+ +   Q+ 
Sbjct: 146 H---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 186

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 1e-25
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 15/168 (8%)

Query: 481 NNFQLSSKLGQGGFGPVYWGRL----KDGQEIAVKRLSKAS----GQGLEEFMNEVMVIS 532
            NF+L   LG G +G V+  R       G+  A+K L KA+     +  E    E  V+ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 533 KLQHR-NLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
            ++    LV L        +  LI +Y+    L   L    ++ER    +    +  I  
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVL 140

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
            L +LH+   L II+RD+K  NILLD   +  ++DFG++K F  ++ +
Sbjct: 141 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 3e-24
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 7/170 (4%)

Query: 480 TNNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQH 536
              +Q  S +G G +G V      K G  +AVK+LS+   S    +    E+ ++  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 537 RNLVRLLGCCVEGEEKMLI-YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLY 595
            N++ LL               Y+    + A L + +K ++L       +I  I RGL Y
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136

Query: 596 LHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRV 645
           +H      IIHRDLK SN+ ++E+   KI DFG+A+            R 
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 183

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-23
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 18/166 (10%)

Query: 481 NNFQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHR 537
             +Q    +G G  G V         + +A+K+LS+   +    +    E++++  + H+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 538 NLVRLLGCCV------EGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISR 591
           N++ LL          E ++  L+ E M       +      +  LD  +   ++  +  
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLC 130

Query: 592 GLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ 637
           G+ +LH      IIHRDLK SNI++  +   KI DFG+A+  G + 
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 93.7 bits (232), Expect = 1e-22
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 20/165 (12%)

Query: 485 LSSKLGQGGFGPVYWGRLKDGQEIAVK--RLSKASGQ--------GLEEFMNEVMVISKL 534
           +   +G+G    V+    +   E  VK  ++   S +        G   F    +  ++ 
Sbjct: 4   IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 535 QHRNLVRLLGCCVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLL 594
           + R L +L G  V       +Y +  N  L  L+                +++ I   + 
Sbjct: 64  EFRALQKLQGLAV-----PKVYAWEGNAVLMELIDAKELYRVRVENPD-EVLDMILEEVA 117

Query: 595 YLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ 639
             +      I+H DL   N+L+ EE    I DF  +   G    +
Sbjct: 118 KFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEGWR 158

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.3 bits (207), Expect = 3e-18
 Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 27/184 (14%)

Query: 483 FQLSSKLGQGGFGPVYWGR-LKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVR 541
           + L  KLG G F  V+  + + +   +A+K +        E   +E+ ++ ++   +  +
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73

Query: 542 LLGCCVEGEEKMLIY---------------EYMPNRSLDALLFDPLKKERLDWRKRFNII 586
                     K+L +               E +    L  +     +   L + K+  I 
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ--IS 131

Query: 587 EGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP------KISDFGMAKIFGGNQDQA 640
           + +  GL Y+HR  R  IIH D+K  N+L++   +P      KI+D G A  +  +   +
Sbjct: 132 KQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 641 DTGR 644
              R
Sbjct: 190 IQTR 193

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 77.7 bits (191), Expect = 6e-18
 Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 39  LSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLV 98
           L  G +  +  ++        + ++         +W +N     K       +  DGN V
Sbjct: 10  LYAGQSLDVEPYHFIMQEDCNLVLYDH----STSVWASNTGILGKKGCKA-VLQSDGNFV 64

Query: 99  LVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF 145
           + + +   LW+S+     N +    L + GN+V+  +     +W + 
Sbjct: 65  VYDAEGRSLWASHSVR-GNGNYVLVLQEDGNVVIYGS----DIWSTG 106

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 71.5 bits (175), Expect = 9e-16
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 62  IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTS 121
           I Y            +    L+ S   +++  D NLVL +    V  ++           
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGK--GTGCR 69

Query: 122 AQLLDSGNLVLRDNINRAIVWESF 145
           A L  +G + +  N N   VW S 
Sbjct: 70  AVLQPNGRMDVLTNQNI-AVWTSG 92

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 10/108 (9%)

Query: 87  GIITISEDGNLVLVNGQKE--VLWSSNVSN-LVNNSTSAQLLDSGNLVLRDNINRAIVWE 143
           G + ++ +GN +L + Q       + + +  L  +     +    NLVL D  +R     
Sbjct: 1   GSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTN 60

Query: 144 SFQEPTDSFLPGMHHG---IDQRTGKKVQLTSWKSLSDPSTGSFSAGL 188
           +  + T        +G   +       V    W S +  S G +   L
Sbjct: 61  TAGKGTGCRAVLQPNGRMDVLTNQNIAV----WTSGNSRSAGRYVFVL 104

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 69.2 bits (169), Expect = 7e-15
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 62  IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTS 121
           I + +  E +     +    L+ SS   T+  D NLVL +    V W+SN +        
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRV-WASNTAG--ATGCR 59

Query: 122 AQLLDSGNLVLRDNINRAIVWESF 145
           A L   G LV+    N  I W S 
Sbjct: 60  AVLQSDGLLVILTAQNT-IRWSSG 82

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 17/111 (15%)

Query: 35  PDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISED 94
               L+ G +F        +     +             W  N        S  +++  D
Sbjct: 12  TGEFLNYG-SFVFIMQEDCNLVLYDVDKPI---------WATNTGGL--SRSCFLSMQTD 59

Query: 95  GNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESF 145
           GNLV+ N   + +W+SN     N +    L    N+V+         W + 
Sbjct: 60  GNLVVYNPSNKPIWASNTGG-QNGNYVCILQKDRNVVIYGT----DRWATG 105

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 72  VIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLV 131
            IW  N             +  DG LV++  +   +W S             L    N+V
Sbjct: 50  PIWATNTGGLGNGC--RAVLQPDGVLVVITNENVTVWQSP-VAGKAGHYVLVLQPDRNVV 106

Query: 132 LRDNINRAIVWES 144
           +  +     +W +
Sbjct: 107 IYGD----ALWAT 115

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 40.4 bits (94), Expect = 8e-05
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 93  EDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES 144
            D NLVL +     +W++N   L N    A L   G LV+  N     VW+S
Sbjct: 38  TDCNLVLYDNNN-PIWATNTGGLGNGCR-AVLQPDGVLVVITN-ENVTVWQS 86

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 15/116 (12%)

Query: 35  PDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISED 94
               L+ G  +     N  +       + YD       +W +  +        ++ +  D
Sbjct: 12  TGGSLAEG-GYLFIIQNDCNL------VLYDN---NRAVWASGTNGKASGC--VLKMQND 59

Query: 95  GNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTD 150
           GNLV+ +G + +    + +N  N +    L    N+V+ DN N AI W +     +
Sbjct: 60  GNLVIYSGSRAIWA--SNTNRQNGNYYLILQRDRNVVIYDNSNNAI-WATHTNVGN 112

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	649
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.98
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.98
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.96
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.95
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.94
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.93
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.93
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.93
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.92
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.91
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.85
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.83
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.82
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.7
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.64
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.59
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.32
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.1
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.09
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.07
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.0
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.79
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.59
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.08
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.49
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.74
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.19
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.67
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.25
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	84.32
d2qj2a1	91	Hepatocyte growth factor {Human (Homo sapiens) [Ta	84.04
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	81.46

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-33  Score=282.86  Aligned_cols=163  Identities=30%  Similarity=0.451  Sum_probs=141.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+++.+|+.++++++|||||++++++.+++..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            57899999999999999999976 68999999986543 33456799999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      +++|+|.++|..   ...+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+.....
T Consensus        85 ~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          85 CSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             CTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             cCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence            999999999953   456999999999999999999999988   99999999999999999999999999998865544


Q ss_pred             ccccCceeecC
Q 006347          639 QADTGRVVGTL  649 (649)
Q Consensus       639 ~~~~~~~~GT~  649 (649)
                      .......+||+
T Consensus       159 ~~~~~~~~GT~  169 (271)
T d1nvra_         159 ERLLNKMCGTL  169 (271)
T ss_dssp             ECCBCCCCSCG
T ss_pred             cccccceeeCc
Confidence            44445577874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=1.9e-33  Score=287.64  Aligned_cols=165  Identities=30%  Similarity=0.488  Sum_probs=143.9

Q ss_pred             HHhcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          478 TATNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       478 ~~~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ...++|++.++||+|+||+||+|++. +++.||||+++.. ....++|.+|+.++++++|||||+++|+|.+++..+|||
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            34567888999999999999999986 5889999999754 445788999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++... ....+++..++.|+.|||+||+|||+++   |+||||||+||||++++++||+|||+|+....+
T Consensus        93 E~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (287)
T d1opja_          93 EFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  168 (287)
T ss_dssp             ECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS
T ss_pred             ecccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCC
Confidence            999999999998653 3457899999999999999999999987   999999999999999999999999999987655


Q ss_pred             CCccccCceeec
Q 006347          637 QDQADTGRVVGT  648 (649)
Q Consensus       637 ~~~~~~~~~~GT  648 (649)
                      ..... ....||
T Consensus       169 ~~~~~-~~~~g~  179 (287)
T d1opja_         169 TYTAH-AGAKFP  179 (287)
T ss_dssp             SSEEE-TTEEEC
T ss_pred             Cceee-cccccc
Confidence            43332 234555

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.4e-32  Score=278.72  Aligned_cols=160  Identities=28%  Similarity=0.471  Sum_probs=142.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.++||+|+||+||+|... +|+.||||+++.......+.+.+|+.++++++|||||++++++.+.+..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            46899999999999999999975 79999999997666566788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCCc
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQDQ  639 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~  639 (649)
                      ++|+|.+++.+    ..+++.++..++.||+.||+|||+.+   ||||||||+|||++.++++||+|||+|+.+..+...
T Consensus       100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeecccccc
Confidence            99999998743    46899999999999999999999988   999999999999999999999999999988544332


Q ss_pred             cccCceeecC
Q 006347          640 ADTGRVVGTL  649 (649)
Q Consensus       640 ~~~~~~~GT~  649 (649)
                        .....||+
T Consensus       173 --~~~~~gt~  180 (293)
T d1yhwa1         173 --RSTMVGTP  180 (293)
T ss_dssp             --BCCCCSCG
T ss_pred             --ccccccCC
Confidence              22356663

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.1e-32  Score=278.52  Aligned_cols=151  Identities=30%  Similarity=0.538  Sum_probs=131.8

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.++||+|+||+||+|.+.+++.||||+++.. ....++|.+|+.++++++|||||+++|+|.+++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            468888999999999999999988899999999753 4556889999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +|+|.+++..  ....++|..++.|+.|||+||+|||+.+   |+||||||+|||+++++++||+|||+|+.+....
T Consensus        84 ~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          84 HGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             TCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred             CCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCC
Confidence            9999999865  3456899999999999999999999987   9999999999999999999999999999875443

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-32  Score=278.12  Aligned_cols=152  Identities=34%  Similarity=0.609  Sum_probs=135.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      .++|++.++||+|+||+||+|.+++++.||||+++.. ....++|.+|+.++++++|||||+++|++.+ +..+|||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            3578888999999999999999998899999999754 3456789999999999999999999998754 5679999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.+++... ....++|.++++|+.|||+||.|||+++   |+||||||+||||++++.+||+|||+|+.+....
T Consensus        90 ~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCc
Confidence            999999988542 2345899999999999999999999987   9999999999999999999999999999986543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-32  Score=278.83  Aligned_cols=162  Identities=31%  Similarity=0.534  Sum_probs=133.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEecCCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||+||+|+.+  ..||||+++..  .....++|.+|+.++.+++|||||+++|++.+ ++.+||||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            367888899999999999999876  36999998643  34567899999999999999999999998754 56899999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      |+++|+|.+++..  .+..+++..++.|+.|||+||+|||+++   ||||||||+||||++++++||+|||+|+......
T Consensus        84 y~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          84 WCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             CCCEEEHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             cCCCCCHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            9999999999964  3456999999999999999999999987   9999999999999999999999999999876544


Q ss_pred             CccccCceeecC
Q 006347          638 DQADTGRVVGTL  649 (649)
Q Consensus       638 ~~~~~~~~~GT~  649 (649)
                      ......+..||+
T Consensus       159 ~~~~~~~~~gt~  170 (276)
T d1uwha_         159 GSHQFEQLSGSI  170 (276)
T ss_dssp             -------CCCCG
T ss_pred             CcccccccccCc
Confidence            444444566763

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-32  Score=279.46  Aligned_cols=149  Identities=29%  Similarity=0.467  Sum_probs=137.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      +.|++.+.||+|+||+||+|+.. +++.||||+++.......++|.+|++++++++|||||++++++.+.+..+|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            45888999999999999999976 68999999998766677789999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++|+|.+++.+  ....+++.++..++.||++||.|||+++   |+||||||+|||++.++++||+|||+|+.+.
T Consensus        92 ~~g~L~~~~~~--~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1          92 AGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             TTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred             CCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccC
Confidence            99999999753  2356999999999999999999999998   9999999999999999999999999998764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3.5e-32  Score=279.87  Aligned_cols=151  Identities=30%  Similarity=0.565  Sum_probs=125.4

Q ss_pred             CcccceeeccCCcEEEEEEEec-CC---cEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DG---QEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g---~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      +|++.+.||+|+||+||+|.+. ++   ..||||++... .....++|.+|+.++++++|||||+++|+|.+++..++||
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~  106 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT  106 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            4566789999999999999975 23   36899998653 3445678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..  ....++|.+++.|+.|||+||+|||+.+   |+||||||+||||++++++||+|||+|+.+...
T Consensus       107 Ey~~~g~L~~~~~~--~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         107 EFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             ECCTTEEHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EecCCCcceeeecc--ccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEccCC
Confidence            99999999999864  3456899999999999999999999987   999999999999999999999999999988654


Q ss_pred             C
Q 006347          637 Q  637 (649)
Q Consensus       637 ~  637 (649)
                      .
T Consensus       182 ~  182 (299)
T d1jpaa_         182 T  182 (299)
T ss_dssp             -
T ss_pred             C
Confidence            3

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=268.50  Aligned_cols=151  Identities=28%  Similarity=0.551  Sum_probs=138.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.++||+|+||+||+|+.+++++||||++++. ....++|.+|+.++++++|||||+++|+|.+++..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            578889999999999999999988889999999764 4456899999999999999999999999999999999999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +|+|.+++..  ....+++..+.+|+.|||+||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus        83 ~g~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          83 NGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             TEEHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             CCcHHHhhhc--cccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence            9999999864  3456899999999999999999999987   9999999999999999999999999999875443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.3e-32  Score=274.89  Aligned_cols=163  Identities=32%  Similarity=0.426  Sum_probs=139.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++.   .....+.+.+|++++++++|||||++++++.+.+..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            46899999999999999999975 7899999998643   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++..+..++.|++.||+|||+.+   ||||||||+|||+++++.+||+|||+|+.+...
T Consensus        88 Ey~~gg~L~~~~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          88 SYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EccCCCCHHHhhhc---cCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccC
Confidence            99999999998853   456999999999999999999999988   999999999999999999999999999998655


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      ..........||+
T Consensus       162 ~~~~~~~~~~GT~  174 (288)
T d1uu3a_         162 SKQARANSFVGTA  174 (288)
T ss_dssp             --------CCCCG
T ss_pred             CcccccccccCCc
Confidence            5444444567774

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=268.87  Aligned_cols=150  Identities=32%  Similarity=0.476  Sum_probs=135.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+.   .....+++.+|+.++++++|||||++++++.+++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            46888999999999999999986 6899999998643   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|+.....
T Consensus        86 Ey~~~g~L~~~l~~---~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          86 EYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             eecCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            99999999999953   356899999999999999999999988   999999999999999999999999999876543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-31  Score=269.54  Aligned_cols=151  Identities=32%  Similarity=0.587  Sum_probs=131.7

Q ss_pred             cCcccce-eeccCCcEEEEEEEec---CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSS-KLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~-~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|.+.+ +||+|+||+||+|.+.   ++..||||+++... ....++|.+|++++.+++|||||+++|++.+ +..+||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            4566666 5999999999999865   35589999997543 3456789999999999999999999999864 568999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++..  .+..+++.++..|+.|||+||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus        87 mE~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          87 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccc
Confidence            999999999999854  3456999999999999999999999987   99999999999999999999999999999865


Q ss_pred             CC
Q 006347          636 NQ  637 (649)
Q Consensus       636 ~~  637 (649)
                      ..
T Consensus       162 ~~  163 (285)
T d1u59a_         162 DD  163 (285)
T ss_dssp             CS
T ss_pred             cc
Confidence            44

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.4e-32  Score=280.46  Aligned_cols=160  Identities=27%  Similarity=0.353  Sum_probs=138.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .++|++.++||+|+||+||+|+.. +|+.||||+++... ....+++.+|+.++++++|||||++++++.+.++.+||||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            467999999999999999999975 78999999997543 3445789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-SRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+++|+|.+++.+   ...+++..+..++.|+++||.|||+. +   |+||||||+|||+++++++||+|||+|+.+...
T Consensus        85 y~~gg~L~~~l~~---~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          85 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             cCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence            9999999999953   35689999999999999999999974 6   999999999999999999999999999976432


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      .    ..+.+||+
T Consensus       159 ~----~~~~~GT~  167 (322)
T d1s9ja_         159 M----ANSFVGTR  167 (322)
T ss_dssp             T----C---CCSS
T ss_pred             c----cccccCCc
Confidence            2    23456764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.9e-32  Score=272.13  Aligned_cols=167  Identities=26%  Similarity=0.444  Sum_probs=128.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEe--CCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE--GEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV  555 (649)
                      ++|++.+.||+|+||+||+|+.. +|+.||||.++...  +...+.+.+|++++++++|||||++++++.+  .+..+||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            56899999999999999999875 78999999986542  3445779999999999999999999999975  3457999


Q ss_pred             EecCCCCChhhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          556 YEYMPNRSLDALLFDPL-KKERLDWRKRFNIIEGISRGLLYLHRDS--RLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      |||+++|+|.+++.+.. ....+++..++.++.||+.||+|||+.+  ..+||||||||+|||+++++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            99999999999985422 2457999999999999999999999854  23599999999999999999999999999998


Q ss_pred             eCCCCCccccCceeecC
Q 006347          633 FGGNQDQADTGRVVGTL  649 (649)
Q Consensus       633 ~~~~~~~~~~~~~~GT~  649 (649)
                      +..+...  .....||+
T Consensus       164 ~~~~~~~--~~~~~gt~  178 (269)
T d2java1         164 LNHDTSF--AKAFVGTP  178 (269)
T ss_dssp             C-------------CCC
T ss_pred             cccCCCc--cccCCCCc
Confidence            7544322  23456764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=271.76  Aligned_cols=151  Identities=34%  Similarity=0.569  Sum_probs=131.9

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMP  560 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~  560 (649)
                      ++|++.+.||+|+||+||+|+++++++||||+++.. ....++|.+|+.++++++|+|||+++|+|. .++.++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence            578899999999999999999998889999999653 455688999999999999999999999985 456899999999


Q ss_pred             CCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          561 NRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       561 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +|+|..++... ....++|.+++.|+.|||+||+|||+.+   |+||||||+||||++++++||+|||+|+.+....
T Consensus        95 ~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          95 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE  167 (285)
T ss_dssp             TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             CCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence            99999998542 2346999999999999999999999987   9999999999999999999999999999875443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.1e-31  Score=274.44  Aligned_cols=167  Identities=28%  Similarity=0.427  Sum_probs=139.3

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC------CcEEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD------GQEIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~------g~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .++|++.++||+|+||+||+|+...      ...||||++... .....+.|.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3578889999999999999998752      236999998653 344567899999999998 89999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCC
Q 006347          552 KMLIYEYMPNRSLDALLFDPLK--------------------KERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKA  611 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp  611 (649)
                      .+|||||+++|+|.++|+....                    ...+++.+++.|+.||++||+|||+++   ||||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCch
Confidence            9999999999999999975321                    235899999999999999999999987   99999999


Q ss_pred             CcEEEcCCCceEEEecCCceeeCCCCCccccCceeecC
Q 006347          612 SNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       612 ~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      +|||++.++++||+|||+|+...............||+
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~  230 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV  230 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECG
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCC
Confidence            99999999999999999999876655544444566763

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=1.3e-30  Score=273.55  Aligned_cols=152  Identities=25%  Similarity=0.443  Sum_probs=138.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||||++++++.+.+..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            57999999999999999999975 78999999998766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC--CCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE--ELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~--~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.+++.+  ....+++.++..|+.||+.||.|||+.+   ||||||||+|||++.  ++.+||+|||+|+.+....
T Consensus       106 ~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         106 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             CSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred             CCCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchheeccccc
Confidence            99999999854  3456999999999999999999999998   999999999999964  6789999999999886544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.8e-31  Score=265.14  Aligned_cols=158  Identities=28%  Similarity=0.392  Sum_probs=133.2

Q ss_pred             ccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEe----CCeEEEEE
Q 006347          484 QLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVE----GEEKMLIY  556 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~  556 (649)
                      +..++||+|+||+||+|+.. +++.||||++...  .....+.|.+|++++++++|||||++++++.+    +...+|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            55678999999999999976 6889999998653  23456789999999999999999999999875    34579999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc-CCCceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD-EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~Ki~DFGla~~~~~  635 (649)
                      ||+++|+|.+++.+   ...+++.++..++.||++||+|||+++ .+|+||||||+|||++ +++.+||+|||+|+....
T Consensus        92 E~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCcHHHHHhc---cccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            99999999999953   356899999999999999999999874 5699999999999996 578999999999987543


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      ...    ....||+
T Consensus       168 ~~~----~~~~GT~  177 (270)
T d1t4ha_         168 SFA----KAVIGTP  177 (270)
T ss_dssp             TSB----EESCSSC
T ss_pred             Ccc----CCcccCc
Confidence            322    2356774

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.5e-31  Score=266.43  Aligned_cols=145  Identities=30%  Similarity=0.514  Sum_probs=126.2

Q ss_pred             eeeccCCcEEEEEEEec---CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecCCC
Q 006347          487 SKLGQGGFGPVYWGRLK---DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPN  561 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~---~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~  561 (649)
                      ++||+|+||+||+|.+.   .++.||||+++...  ....++|.+|+.++++++|||||+++|+|. .+..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            47999999999999865   34689999996432  334578999999999999999999999985 4567899999999


Q ss_pred             CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCCC
Q 006347          562 RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQD  638 (649)
Q Consensus       562 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~  638 (649)
                      |+|.+++..   ...+++..++.|+.|||+||+|||+.+   ||||||||+|||++.++.+||+|||+|+.+.....
T Consensus        92 g~L~~~l~~---~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~  162 (277)
T d1xbba_          92 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  162 (277)
T ss_dssp             EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             CcHHHHHhh---ccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhcccccc
Confidence            999999853   456999999999999999999999987   99999999999999999999999999998865443

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-30  Score=272.34  Aligned_cols=161  Identities=27%  Similarity=0.319  Sum_probs=142.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++++.   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            57999999999999999999975 7999999999753   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++.....++.||+.||+|||+.+   ||||||||+|||+++++.+||+|||+|+.+...
T Consensus        85 ey~~gg~L~~~~~~---~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~  158 (337)
T d1o6la_          85 EYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             ECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eccCCCchhhhhhc---ccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeecccccccccC
Confidence            99999999999853   456899999999999999999999998   999999999999999999999999999987543


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      ...  .....||+
T Consensus       159 ~~~--~~~~~GT~  169 (337)
T d1o6la_         159 GAT--MKTFCGTP  169 (337)
T ss_dssp             TCC--BCCCEECG
T ss_pred             Ccc--cccceeCH
Confidence            332  33467874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=2.4e-30  Score=271.79  Aligned_cols=152  Identities=24%  Similarity=0.389  Sum_probs=137.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|++.+.||+|+||.||+|... +|+.||||+++.......+.+.+|+.++++++|||||++++++.+++..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            46999999999999999999975 79999999997765556678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc--CCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD--EELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~--~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.+++..  ....+++.++..|+.||+.||+|||+.+   ||||||||+||||+  +++.+||+|||+|+.+....
T Consensus       109 ~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         109 SGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             CCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccceecCCCC
Confidence            99999888743  3446899999999999999999999988   99999999999998  67899999999999986543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=8.4e-31  Score=270.43  Aligned_cols=148  Identities=33%  Similarity=0.549  Sum_probs=133.2

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---ccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---QGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .|+..++||+|+||+||+|+.. +++.||||+++....   ...+++.+|+.++++++|||||++++++.+++..+||||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4888999999999999999875 788999999975432   344679999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |+++|+|..++.   ....+++.++..++.||++||.|||+++   ||||||||+|||+++++++||+|||+|+....
T Consensus        96 ~~~~g~l~~~~~---~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          96 YCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             CCSEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ecCCCchHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            999999987764   3457999999999999999999999988   99999999999999999999999999997643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.4e-31  Score=267.08  Aligned_cols=152  Identities=32%  Similarity=0.555  Sum_probs=128.6

Q ss_pred             cCcccceeeccCCcEEEEEEEecCC-----cEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDG-----QEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g-----~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      ..|+..+.||+|+||.||+|.++..     ..||||+++... .....+|.+|+.++.+++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4577889999999999999987632     479999996543 3345679999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++++|.+++..  ....++|.+++.++.||++||+|||+.+   |+||||||+||||++++.+||+|||+|+.+.
T Consensus        87 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          87 ITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             EEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEecccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhccc
Confidence            9999999999988754  3456899999999999999999999987   9999999999999999999999999999875


Q ss_pred             CCC
Q 006347          635 GNQ  637 (649)
Q Consensus       635 ~~~  637 (649)
                      ...
T Consensus       162 ~~~  164 (283)
T d1mqba_         162 DDP  164 (283)
T ss_dssp             ---
T ss_pred             CCC
Confidence            443

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=5.4e-31  Score=271.34  Aligned_cols=171  Identities=27%  Similarity=0.467  Sum_probs=141.8

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEeccccc-ccHHHHHHHHHHHhcCCCCCccceEEEEE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKASG-QGLEEFMNEVMVISKLQHRNLVRLLGCCV  547 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~  547 (649)
                      +++...++|++.++||+|+||+||+|+..      +++.||||+++.... ...++|.+|+.++++++||||++++++|.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            34445678999999999999999999864      357899999975433 34578999999999999999999999999


Q ss_pred             eCCeEEEEEecCCCCChhhhhcCCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 006347          548 EGEEKMLIYEYMPNRSLDALLFDPL---------------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIH  606 (649)
Q Consensus       548 ~~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH  606 (649)
                      +.+..++||||+++|+|.++++...                     ....+++..++.|+.|+++||+|||+.+   |||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivH  163 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH  163 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEe
Confidence            9999999999999999999986321                     1235899999999999999999999987   999


Q ss_pred             cCCCCCcEEEcCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          607 RDLKASNILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       607 rDlkp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      |||||+|||||.++++||+|||+|+.+.........+...||
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~  205 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIP  205 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBC
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcC
Confidence            999999999999999999999999987554433333334444

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.2e-30  Score=266.07  Aligned_cols=158  Identities=32%  Similarity=0.447  Sum_probs=139.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.++||+|+||+||+|+.. +|+.||||++++.   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            46889999999999999999975 6899999999643   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|..++..   ...+++.....++.||+.||+|||+++   ||||||||+|||+++++.+||+|||+|+.+...
T Consensus        84 E~~~gg~l~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          84 DYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eecCCccccccccc---cccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            99999999998853   456788899999999999999999987   999999999999999999999999999987533


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      .     ..+.||+
T Consensus       158 ~-----~~~~Gt~  165 (316)
T d1fota_         158 T-----YTLCGTP  165 (316)
T ss_dssp             B-----CCCCSCT
T ss_pred             c-----ccccCcc
Confidence            2     2356764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.5e-30  Score=266.79  Aligned_cols=161  Identities=27%  Similarity=0.370  Sum_probs=124.2

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      .+.|++.+.||+|+||+||+|+.. +++.||||++.+.. ....+.+.+|+.++++++|||||++++++.+++..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            356899999999999999999976 68999999997543 2344678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc---CCCceEEEecCCceeeC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFG  634 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~Ki~DFGla~~~~  634 (649)
                      |+++|+|.++|..   ...+++.++..++.||+.||+|||+.+   |+||||||+|||+.   +++.+||+|||+|+...
T Consensus        88 ~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          88 LVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             ccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            9999999999954   457999999999999999999999988   99999999999994   57899999999999875


Q ss_pred             CCCCccccCceeecC
Q 006347          635 GNQDQADTGRVVGTL  649 (649)
Q Consensus       635 ~~~~~~~~~~~~GT~  649 (649)
                      ....   .....||+
T Consensus       162 ~~~~---~~~~~GT~  173 (307)
T d1a06a_         162 PGSV---LSTACGTP  173 (307)
T ss_dssp             --------------C
T ss_pred             CCCe---eeeeeeCc
Confidence            4332   22356774

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=6.2e-30  Score=259.85  Aligned_cols=150  Identities=29%  Similarity=0.406  Sum_probs=135.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc---------ccHHHHHHHHHHHhcCC-CCCccceEEEEEeC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG---------QGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEG  549 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~---------~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~  549 (649)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++...         ...+.+.+|+.++++++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            57899999999999999999975 789999999865321         12346889999999996 99999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      +..+|||||+++|+|.++|..   ...+++.++..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             cceEEEEEcCCCchHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchh
Confidence            999999999999999999953   456999999999999999999999988   99999999999999999999999999


Q ss_pred             ceeeCCC
Q 006347          630 AKIFGGN  636 (649)
Q Consensus       630 a~~~~~~  636 (649)
                      |+.+...
T Consensus       157 a~~~~~~  163 (277)
T d1phka_         157 SCQLDPG  163 (277)
T ss_dssp             CEECCTT
T ss_pred             eeEccCC
Confidence            9988654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.3e-29  Score=259.78  Aligned_cols=150  Identities=31%  Similarity=0.425  Sum_probs=134.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc------cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS------GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      +.|++.+.||+|+||+||+|... +|+.||||++++..      ....+.|.+|+.++++++|||||++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            57999999999999999999975 78999999986432      124678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC----ceEEEecCC
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL----NPKISDFGM  629 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~Ki~DFGl  629 (649)
                      |||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++    .+||+|||+
T Consensus        90 iv~E~~~gg~L~~~i~~---~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          90 LILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEcCCCccccchhcc---ccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchhh
Confidence            99999999999999953   356999999999999999999999988   99999999999998776    499999999


Q ss_pred             ceeeCCC
Q 006347          630 AKIFGGN  636 (649)
Q Consensus       630 a~~~~~~  636 (649)
                      |+.+...
T Consensus       164 a~~~~~~  170 (293)
T d1jksa_         164 AHKIDFG  170 (293)
T ss_dssp             CEECTTS
T ss_pred             hhhcCCC
Confidence            9987543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.8e-30  Score=265.50  Aligned_cols=163  Identities=30%  Similarity=0.529  Sum_probs=132.8

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc----EEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ----EIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~----~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .+|++.++||+|+||+||+|.+. +|+    +||||+++.. ..+..++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            35899999999999999999875 343    6899998653 345678999999999999999999999999865 5678


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++||+++|+|.+++..  ....+++..+++|+.|||+||+|||+++   ||||||||+|||++.++++||+|||+|+.+.
T Consensus        88 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          88 ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             EEECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             EEEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceecc
Confidence            8999999999988864  3456899999999999999999999987   9999999999999999999999999999986


Q ss_pred             CCCCccccCceeecC
Q 006347          635 GNQDQADTGRVVGTL  649 (649)
Q Consensus       635 ~~~~~~~~~~~~GT~  649 (649)
                      .......+....||+
T Consensus       163 ~~~~~~~~~~~~gt~  177 (317)
T d1xkka_         163 AEEKEYHAEGGKVPI  177 (317)
T ss_dssp             TTCC--------CCT
T ss_pred             cccccccccccccCc
Confidence            655544444456663

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-30  Score=265.92  Aligned_cols=172  Identities=28%  Similarity=0.407  Sum_probs=133.6

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCC  546 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~  546 (649)
                      +.+...++|++.++||+|+||.||+|+..      +++.||||+++... ....+++.+|...+.++ +|+|||++++++
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            33334467999999999999999999864      34689999997533 34567788898888887 789999999998


Q ss_pred             EeCC-eEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCC
Q 006347          547 VEGE-EKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKAS  612 (649)
Q Consensus       547 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~  612 (649)
                      .+.+ ..++||||+++|+|.++|+...             ....+++.+++.++.||++||+|||+++   ||||||||+
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~  163 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAAR  163 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGG
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCcc
Confidence            7654 6899999999999999996422             1345899999999999999999999987   999999999


Q ss_pred             cEEEcCCCceEEEecCCceeeCCCCCccccCceeecC
Q 006347          613 NILLDEELNPKISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       613 NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      ||||++++++||+|||+|+...............||+
T Consensus       164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~  200 (299)
T d1ywna1         164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL  200 (299)
T ss_dssp             GEEECGGGCEEECC------CCSCTTSCCTTSCCCGG
T ss_pred             ceeECCCCcEEEccCcchhhccccccccccCceeeCc
Confidence            9999999999999999999876655555555567773

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=259.81  Aligned_cols=150  Identities=21%  Similarity=0.327  Sum_probs=134.2

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++|.+.+.||+|+||+||+|... +++.||||.++... .....+.+|++++++++|||||++++++.+++..+|||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            57899999999999999999976 68899999997643 34567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCC--CceEEEecCCceeeCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEE--LNPKISDFGMAKIFGGN  636 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~--~~~Ki~DFGla~~~~~~  636 (649)
                      ++|+|.+++..  ....+++.++..|+.||++||+|||+.+   |+||||||+|||++.+  ..+||+|||+++.....
T Consensus        84 ~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          84 SGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            99999999954  2346899999999999999999999988   9999999999999854  58999999999987543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.8e-30  Score=262.98  Aligned_cols=166  Identities=30%  Similarity=0.469  Sum_probs=140.8

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEK  552 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~  552 (649)
                      .++|.+.++||+|+||.||+|.+.      +++.||||+++... .+....|.+|+.++++++|||||+++|+|...++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            467888899999999999999864      35789999997543 34456799999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhcCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          553 MLIYEYMPNRSLDALLFDP-------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       553 ~lV~Ey~~~gsL~~~l~~~-------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      ++||||+++|+|.+++...       .....+++..+.+++.|+|+||.|||+++   |+||||||+|||+++++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEe
Confidence            9999999999999998531       12245799999999999999999999987   9999999999999999999999


Q ss_pred             ecCCceeeCCCCCccccCceeec
Q 006347          626 DFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       626 DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      |||+|+.+..........+..||
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t  198 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLP  198 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEEC
T ss_pred             ecccceeccCCcceeeccceecc
Confidence            99999987554443334444555

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.4e-29  Score=263.99  Aligned_cols=158  Identities=27%  Similarity=0.364  Sum_probs=140.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~  556 (649)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++++.   .....+.+.+|+.++++++|||||++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            47999999999999999999976 7999999998643   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ||+++|+|.+++..   ...+++..+..++.||++||.|||+.+   ||||||||+|||++.++++||+|||+|+.+...
T Consensus       121 e~~~~g~l~~~l~~---~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             ccccccchhhhHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            99999999999853   356899999999999999999999988   999999999999999999999999999987543


Q ss_pred             CCccccCceeecC
Q 006347          637 QDQADTGRVVGTL  649 (649)
Q Consensus       637 ~~~~~~~~~~GT~  649 (649)
                      .     ....||+
T Consensus       195 ~-----~~~~Gt~  202 (350)
T d1rdqe_         195 T-----WTLCGTP  202 (350)
T ss_dssp             B-----CCCEECG
T ss_pred             c-----ccccCcc
Confidence            2     2356763

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=2.6e-29  Score=265.13  Aligned_cols=159  Identities=30%  Similarity=0.347  Sum_probs=135.1

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHH---HHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMN---EVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~---E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++.+..   ......+.+   |+.+++.++|||||++++++.+.+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            67999999999999999999976 68999999986421   223334444   467778888999999999999999999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      |||||+++|+|.++|..   ...+++.++..++.||+.||+|||+.+   ||||||||+|||+++++.+||+|||+|+.+
T Consensus        84 ivmE~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             EEECCCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             EEEEecCCCcHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeeec
Confidence            99999999999999953   356889999999999999999999988   999999999999999999999999999987


Q ss_pred             CCCCCccccCceeecC
Q 006347          634 GGNQDQADTGRVVGTL  649 (649)
Q Consensus       634 ~~~~~~~~~~~~~GT~  649 (649)
                      .....    ....||+
T Consensus       158 ~~~~~----~~~~GT~  169 (364)
T d1omwa3         158 SKKKP----HASVGTH  169 (364)
T ss_dssp             SSSCC----CSCCSCG
T ss_pred             CCCcc----ccccccc
Confidence            55432    2345663

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-29  Score=258.59  Aligned_cols=160  Identities=27%  Similarity=0.418  Sum_probs=129.3

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHH--HHHHhcCCCCCccceEEEEEeCC----eEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNE--VMVISKLQHRNLVRLLGCCVEGE----EKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E--~~~l~~l~H~niv~l~g~~~~~~----~~~l  554 (649)
                      ++|.+.++||+|+||+||+|++. |+.||||+++..   ..+++..|  +..+.+++|||||+++|+|.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            35677899999999999999975 889999999643   23444444  45556789999999999998754    5799


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRD-----SRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      ||||+++|+|.++|++    ..++|..+++++.|+|+||+|||+.     ...+||||||||+||||++++.+||+|||+
T Consensus        79 v~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence            9999999999999953    3589999999999999999999974     234699999999999999999999999999


Q ss_pred             ceeeCCCCCcc--ccCceeec
Q 006347          630 AKIFGGNQDQA--DTGRVVGT  648 (649)
Q Consensus       630 a~~~~~~~~~~--~~~~~~GT  648 (649)
                      ++.+.......  ......||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt  175 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             CEEEETTTTEECC----CCSC
T ss_pred             cccccCCCcceeccccceecc
Confidence            99985543322  22345566

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=256.46  Aligned_cols=153  Identities=32%  Similarity=0.498  Sum_probs=125.6

Q ss_pred             cCcccceeeccCCcEEEEEEEec--CC--cEEEEEEeccc---ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK--DG--QEIAVKRLSKA---SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~--~g--~~vAVK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~  553 (649)
                      ++|++.+.||+|+||.||+|++.  ++  .+||||++++.   .....++|.+|+.++++++|||||+++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            56888999999999999999864  22  47999998653   23445789999999999999999999999965 4678


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceee
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIF  633 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~  633 (649)
                      +||||+++|+|.+++..  +...+++..+++++.|||+||.|||+++   |+||||||+||||+.++.+||+|||+|+.+
T Consensus        87 lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeeeecCcchhhhhhc--ccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhc
Confidence            99999999999988754  3456999999999999999999999987   999999999999999999999999999998


Q ss_pred             CCCCCc
Q 006347          634 GGNQDQ  639 (649)
Q Consensus       634 ~~~~~~  639 (649)
                      ......
T Consensus       162 ~~~~~~  167 (273)
T d1u46a_         162 PQNDDH  167 (273)
T ss_dssp             CC-CCE
T ss_pred             ccCCCc
Confidence            655443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=257.28  Aligned_cols=151  Identities=27%  Similarity=0.468  Sum_probs=130.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||+||+|+.. +|+.||||+++...  ....+++.+|+.++++++|||||++++++.++++.++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57999999999999999999975 78999999996432  2346789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      |+.++.+......  ....+++..+..++.||+.||+|||+.+   ||||||||+|||++.++.+||+|||+|+.....
T Consensus        82 ~~~~~~~~~~~~~--~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          82 FLHQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             CCSEEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             ecCCchhhhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCC
Confidence            9976544433322  3456999999999999999999999988   999999999999999999999999999987543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-29  Score=258.19  Aligned_cols=151  Identities=34%  Similarity=0.585  Sum_probs=131.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCc--EEEEEEeccc-ccccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQ--EIAVKRLSKA-SGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~--~vAVK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|++.++||+|+||.||+|++. ++.  .||||+++.. .....++|.+|++++.++ +|||||+++|+|.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            56788899999999999999986 343  5888988543 334567899999999999 799999999999999999999


Q ss_pred             EecCCCCChhhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCce
Q 006347          556 YEYMPNRSLDALLFDP-------------LKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNP  622 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~  622 (649)
                      |||+++|+|.++|+..             .....+++..+.+++.|||+||.|||+.+   |+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence            9999999999999753             23467999999999999999999999987   9999999999999999999


Q ss_pred             EEEecCCceeeC
Q 006347          623 KISDFGMAKIFG  634 (649)
Q Consensus       623 Ki~DFGla~~~~  634 (649)
                      ||+|||+|+...
T Consensus       167 kl~DfG~a~~~~  178 (309)
T d1fvra_         167 KIADFGLSRGQE  178 (309)
T ss_dssp             EECCTTCEESSC
T ss_pred             EEcccccccccc
Confidence            999999998754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.3e-29  Score=255.32  Aligned_cols=151  Identities=25%  Similarity=0.424  Sum_probs=124.4

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC----CcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEE
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD----GQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~----g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l  554 (649)
                      .++|++.+.||+|+||+||+|++..    +..||||+++... ....+.|.+|+.++++++|||||+++|++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3578889999999999999998752    4579999986543 334578999999999999999999999985 567899


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ||||+++|+|.+++..  ....+++..++.++.||++||.|||+.+   ||||||||+||++++++.+||+|||+|+.+.
T Consensus        85 v~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          85 IMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheecc
Confidence            9999999999998754  3456899999999999999999999988   9999999999999999999999999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       160 ~~  161 (273)
T d1mp8a_         160 DS  161 (273)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.3e-29  Score=258.92  Aligned_cols=161  Identities=32%  Similarity=0.428  Sum_probs=138.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc---ccccHHHHHHHHHHHh-cCCCCCccceEEEEEeCCeEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA---SGQGLEEFMNEVMVIS-KLQHRNLVRLLGCCVEGEEKMLI  555 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~---~~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV  555 (649)
                      ++|.+.+.||+|+||+||+|+.. +++.||||++++.   .....+.+..|+.++. .++|||||++++++.+++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57889999999999999999986 6899999999653   2345567778877765 68999999999999999999999


Q ss_pred             EecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          556 YEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       556 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      |||+++|+|.+++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||+++++++||+|||+|+....
T Consensus        82 mEy~~~g~L~~~i~~---~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          82 MEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EeecCCCcHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhccc
Confidence            999999999999953   356889999999999999999999998   99999999999999999999999999997754


Q ss_pred             CCCccccCceeecC
Q 006347          636 NQDQADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~~~~~~~~GT~  649 (649)
                      ....  .....||+
T Consensus       156 ~~~~--~~~~~gt~  167 (320)
T d1xjda_         156 GDAK--TNTFCGTP  167 (320)
T ss_dssp             TTCC--BCCCCSCG
T ss_pred             cccc--ccccCCCC
Confidence            4332  22356663

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-29  Score=259.82  Aligned_cols=167  Identities=31%  Similarity=0.437  Sum_probs=142.9

Q ss_pred             hcCcccceeeccCCcEEEEEEEec------CCcEEEEEEecccc-cccHHHHHHHHHHHhcC-CCCCccceEEEEEeCCe
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK------DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKL-QHRNLVRLLGCCVEGEE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~------~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~  551 (649)
                      .++|++.+.||+|+||.||+|++.      +++.||||+++... .....+|.+|+.++.++ +|||||+++|+|.+++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            367888899999999999999863      45789999997543 34556899999999999 79999999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          552 KMLIYEYMPNRSLDALLFDPL---------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      .+|||||+++|+|.++++...               ....+++..+.+++.||++||+|||+++   ||||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            999999999999999986432               2236899999999999999999999998   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCCCCccccCceeecC
Q 006347          617 DEELNPKISDFGMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~  649 (649)
                      +.++.+||+|||+++...............||+
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~  211 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPV  211 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECG
T ss_pred             cccCcccccccchheeccCCCcceEeeecccCh
Confidence            999999999999999886655444455566663

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.6e-29  Score=255.67  Aligned_cols=147  Identities=27%  Similarity=0.539  Sum_probs=129.0

Q ss_pred             ceeeccCCcEEEEEEEecCC----cEEEEEEeccc-ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC-CeEEEEEecC
Q 006347          486 SSKLGQGGFGPVYWGRLKDG----QEIAVKRLSKA-SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-EEKMLIYEYM  559 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~g----~~vAVK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey~  559 (649)
                      .++||+|+||+||+|++.++    ..||||++++. .....++|.+|++++++++|||||+++|++.+. ...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            47899999999999997532    36899999753 445668899999999999999999999999875 5789999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      ++|+|.+++..  ....+++..+++++.|+|+||.|||+.+   |+||||||+||||++++.+||+|||+++.+....
T Consensus       112 ~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         112 KHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             TTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             ecCchhhhhcc--ccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            99999999865  3455789999999999999999999987   9999999999999999999999999999875443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=7e-29  Score=253.47  Aligned_cols=150  Identities=25%  Similarity=0.439  Sum_probs=135.0

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.++||+|+||+||+|+.++|+.||||+++...  ....+.+.+|+.++++++|||||++++++.+.+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5789999999999999999999999999999996542  33467899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      +.++.+..+..   ....+++..+..|+.||++||+|||+.+   ||||||||+|||++.++.+||+|||+|......
T Consensus        82 ~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          82 LDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             CSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ehhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            98877776663   3467999999999999999999999987   999999999999999999999999999987543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-29  Score=252.98  Aligned_cols=148  Identities=32%  Similarity=0.529  Sum_probs=126.4

Q ss_pred             cCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeC-CeEEEEEecC
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-EEKMLIYEYM  559 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey~  559 (649)
                      ++|++.+.||+|+||.||+|.++ |++||||+++..  ...++|.+|++++++++|||||+++|+|.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            46788899999999999999986 789999999653  4557899999999999999999999999765 5679999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGG  635 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~  635 (649)
                      ++|+|.++|+.. ....++|..+++|+.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        84 ~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          84 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCC
Confidence            999999999642 2335899999999999999999999987   99999999999999999999999999998644

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.6e-29  Score=255.89  Aligned_cols=146  Identities=30%  Similarity=0.419  Sum_probs=125.9

Q ss_pred             ceeeccCCcEEEEEEEec-CCcEEEEEEecccccc-----cHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEecC
Q 006347          486 SSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQ-----GLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYEYM  559 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~  559 (649)
                      ++.||+|+||+||+|+.. +|+.||||+++.....     ..+.+.+|+.++++++|||||++++++.+++..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            478999999999999976 6899999998653221     2356899999999999999999999999999999999999


Q ss_pred             CCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCCC
Q 006347          560 PNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGNQ  637 (649)
Q Consensus       560 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~~  637 (649)
                      +++++..++.   ....+++.++..++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus        83 ~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          83 ETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             SEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             cchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCc
Confidence            9887776653   3456888999999999999999999988   9999999999999999999999999999875443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=1.6e-28  Score=249.62  Aligned_cols=164  Identities=24%  Similarity=0.395  Sum_probs=132.7

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc---cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC----e
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS---GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE----E  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~  551 (649)
                      .++|++.+.||+|+||+||+|+.. +|+.||||.+++..   ....+.|.+|+.++++++|||||++++++.+.+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            367999999999999999999975 78999999997543   233567999999999999999999999998754    3


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .+|||||+++++|.+++..   ...+++.++..|+.||++||+|||+.+   |+||||||+|||++.++..||+|||+++
T Consensus        86 ~~lvmE~~~g~~L~~~~~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEehhhhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhh
Confidence            7899999999999998853   356899999999999999999999988   9999999999999999999999999998


Q ss_pred             eeCCCCCc-cccCceeecC
Q 006347          632 IFGGNQDQ-ADTGRVVGTL  649 (649)
Q Consensus       632 ~~~~~~~~-~~~~~~~GT~  649 (649)
                      ........ .......||+
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~  178 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTA  178 (277)
T ss_dssp             ECC----------------
T ss_pred             hhccccccccccccccCcc
Confidence            76443222 2333456664

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8e-29  Score=254.68  Aligned_cols=166  Identities=28%  Similarity=0.437  Sum_probs=136.0

Q ss_pred             hcCcccceeeccCCcEEEEEEEecC--------CcEEEEEEeccccc-ccHHHHHHHHHHHhcC-CCCCccceEEEEEeC
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLKD--------GQEIAVKRLSKASG-QGLEEFMNEVMVISKL-QHRNLVRLLGCCVEG  549 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~~--------g~~vAVK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~  549 (649)
                      .++|.+.+.||+|+||.||+|+...        +..||||++++... ....++.+|+..+.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            3578888999999999999998642        34799999976443 4567899999999988 899999999999999


Q ss_pred             CeEEEEEecCCCCChhhhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEE
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPL-------------KKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILL  616 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl  616 (649)
                      +..++||||+++|+|.++|....             ....+++.++++++.||++||+|||+.+   ||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceee
Confidence            99999999999999999997532             1246899999999999999999999998   9999999999999


Q ss_pred             cCCCceEEEecCCceeeCCCCCccccCceeec
Q 006347          617 DEELNPKISDFGMAKIFGGNQDQADTGRVVGT  648 (649)
Q Consensus       617 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT  648 (649)
                      +.++.+||+|||+++..........+....||
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  200 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLP  200 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCG
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCC
Confidence            99999999999999988655444444444554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6e-28  Score=251.82  Aligned_cols=148  Identities=25%  Similarity=0.339  Sum_probs=127.3

Q ss_pred             cCcccce-eeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcC-CCCCccceEEEEEe----CCeEE
Q 006347          481 NNFQLSS-KLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKL-QHRNLVRLLGCCVE----GEEKM  553 (649)
Q Consensus       481 ~~f~~~~-~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~----~~~~~  553 (649)
                      ++|.+.+ .||+|+||+||+|+.. +++.||||+++.     .+.+.+|+.++.++ +|||||++++++.+    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            5788765 5999999999999974 789999999854     25677899987655 89999999999876    35689


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC---CCceEEEecCCc
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE---ELNPKISDFGMA  630 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~Ki~DFGla  630 (649)
                      ||||||++|+|.++|.+. ....+++.++..|+.||+.||+|||+.+   |+||||||+|||+++   ++.+||+|||+|
T Consensus        86 ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHHcC---Ccccccccccccccccccccccccccccee
Confidence            999999999999999653 2356999999999999999999999988   999999999999985   567999999999


Q ss_pred             eeeCCCC
Q 006347          631 KIFGGNQ  637 (649)
Q Consensus       631 ~~~~~~~  637 (649)
                      +......
T Consensus       162 ~~~~~~~  168 (335)
T d2ozaa1         162 KETTSHN  168 (335)
T ss_dssp             EECCCCC
T ss_pred             eeccCCC
Confidence            9875543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4e-28  Score=246.11  Aligned_cols=149  Identities=26%  Similarity=0.375  Sum_probs=129.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccccc------ccHHHHHHHHHHHhcCC--CCCccceEEEEEeCCe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASG------QGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGEE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~------~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~  551 (649)
                      ++|++.+.||+|+||+||+|+.. +|+.||||++++...      ...+++.+|+.++++++  |||||++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            57999999999999999999975 789999999865321      12345778999999996  8999999999999999


Q ss_pred             EEEEEecCCC-CChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-CCceEEEecCC
Q 006347          552 KMLIYEYMPN-RSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-ELNPKISDFGM  629 (649)
Q Consensus       552 ~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~Ki~DFGl  629 (649)
                      .++||||+.+ +++.+++..   ...+++.++..++.||++||+|||+.+   |+||||||+|||++. ++.+||+|||+
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~---~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEEEeccCcchHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccc
Confidence            9999999976 577777743   456899999999999999999999988   999999999999985 47999999999


Q ss_pred             ceeeCC
Q 006347          630 AKIFGG  635 (649)
Q Consensus       630 a~~~~~  635 (649)
                      |+....
T Consensus       158 a~~~~~  163 (273)
T d1xwsa_         158 GALLKD  163 (273)
T ss_dssp             CEECCS
T ss_pred             ceeccc
Confidence            998643

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-27  Score=250.68  Aligned_cols=149  Identities=24%  Similarity=0.406  Sum_probs=127.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc-cccHHHHHHHHHHHhcCCCCCccceEEEEEeCC----eEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS-GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE----EKML  554 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~l  554 (649)
                      .+|++.++||+|+||+||+|+.. +|+.||||++++.. ....+++++|+.+|++++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            46999999999999999999865 79999999997543 334578999999999999999999999997654    2355


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeC
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFG  634 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~  634 (649)
                      ++||+.+|+|.+++..    ..+++..+..++.||++||+|||+++   ||||||||+|||+++++.+||+|||+|+...
T Consensus        88 l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          88 LVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             EEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence            5667779999999943    46899999999999999999999988   9999999999999999999999999999875


Q ss_pred             CC
Q 006347          635 GN  636 (649)
Q Consensus       635 ~~  636 (649)
                      ..
T Consensus       161 ~~  162 (345)
T d1pmea_         161 PD  162 (345)
T ss_dssp             GG
T ss_pred             CC
Confidence            44

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.5e-27  Score=240.32  Aligned_cols=150  Identities=23%  Similarity=0.422  Sum_probs=135.5

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeCCeEEEEEe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      ++|++.++||+|+||+||+|+.. +++.||||+++...  ....+++.+|+.++++++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            57999999999999999999975 78999999986432  3456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCceeeCCC
Q 006347          558 YMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAKIFGGN  636 (649)
Q Consensus       558 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~~~~~  636 (649)
                      ++.+++|..++..   ...+++..+..++.|+++||+|||+++   |+||||||+|||++.++.+||+|||+|+.....
T Consensus        82 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          82 FCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             ecccccccccccc---ccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCC
Confidence            9999999888743   456889999999999999999999987   999999999999999999999999999987543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-27  Score=248.89  Aligned_cols=149  Identities=28%  Similarity=0.393  Sum_probs=123.8

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------eEEE
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------EKML  554 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~l  554 (649)
                      +|+..++||+|+||+||+|+.. +|+.||||++.....    .+.+|+.++++++|+|||++++++....      ..+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            5788899999999999999986 689999999965432    2347999999999999999999996533      4689


Q ss_pred             EEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceee
Q 006347          555 IYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIF  633 (649)
Q Consensus       555 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~  633 (649)
                      ||||++++.+..+.........+++.++..++.||++||+|||+++   |+||||||+|||++.++ .+||+|||+|+.+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999987654444322223557999999999999999999999987   99999999999999765 8999999999987


Q ss_pred             CCCC
Q 006347          634 GGNQ  637 (649)
Q Consensus       634 ~~~~  637 (649)
                      ...+
T Consensus       174 ~~~~  177 (350)
T d1q5ka_         174 VRGE  177 (350)
T ss_dssp             CTTS
T ss_pred             cCCc
Confidence            5443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.94  E-value=7.1e-27  Score=243.21  Aligned_cols=145  Identities=24%  Similarity=0.421  Sum_probs=127.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeC--CeEEEEE
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEG--EEKMLIY  556 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~  556 (649)
                      ++|++.++||+|+||+||+|+.. +++.||||+++..   ..+++.+|+.++.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            57999999999999999999975 7899999999643   4578899999999995 99999999999854  4589999


Q ss_pred             ecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCC-ceEEEecCCceeeCC
Q 006347          557 EYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEEL-NPKISDFGMAKIFGG  635 (649)
Q Consensus       557 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~Ki~DFGla~~~~~  635 (649)
                      ||+++++|..+.      +.+++.++..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||+|+.+..
T Consensus       112 e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         112 EHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             ECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccC
Confidence            999999997764      35899999999999999999999998   99999999999998655 699999999998754


Q ss_pred             CC
Q 006347          636 NQ  637 (649)
Q Consensus       636 ~~  637 (649)
                      .+
T Consensus       183 ~~  184 (328)
T d3bqca1         183 GQ  184 (328)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=240.03  Aligned_cols=150  Identities=27%  Similarity=0.497  Sum_probs=128.3

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeC--------
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG--------  549 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------  549 (649)
                      ++|++.++||+|+||+||+|+.. +|+.||||++...  .....+++.+|+.++++++|+|++++++.+...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            67999999999999999999975 7999999998543  334567899999999999999999999998653        


Q ss_pred             CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCC
Q 006347          550 EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGM  629 (649)
Q Consensus       550 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGl  629 (649)
                      +..++||||++++.+..+..   ....++......++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecce
Confidence            45789999998887765552   3456888999999999999999999988   99999999999999999999999999


Q ss_pred             ceeeCCC
Q 006347          630 AKIFGGN  636 (649)
Q Consensus       630 a~~~~~~  636 (649)
                      |+.+...
T Consensus       164 ~~~~~~~  170 (318)
T d3blha1         164 ARAFSLA  170 (318)
T ss_dssp             CEECCC-
T ss_pred             eeecccc
Confidence            9987543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-26  Score=243.44  Aligned_cols=149  Identities=27%  Similarity=0.454  Sum_probs=125.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEeccc--ccccHHHHHHHHHHHhcCCCCCccceEEEEEeCC------
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKA--SGQGLEEFMNEVMVISKLQHRNLVRLLGCCVEGE------  550 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------  550 (649)
                      .++|++.++||+|+||+||+|... +|+.||||++++.  .....+.+.+|+.+|++++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            367999999999999999999975 6999999999753  2334568899999999999999999999998765      


Q ss_pred             eEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCc
Q 006347          551 EKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMA  630 (649)
Q Consensus       551 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla  630 (649)
                      +.+|||||+ +.+|..++.    ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHH----hccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccce
Confidence            469999999 567777763    356999999999999999999999998   999999999999999999999999999


Q ss_pred             eeeCCC
Q 006347          631 KIFGGN  636 (649)
Q Consensus       631 ~~~~~~  636 (649)
                      +.....
T Consensus       169 ~~~~~~  174 (346)
T d1cm8a_         169 RQADSE  174 (346)
T ss_dssp             EECCSS
T ss_pred             eccCCc
Confidence            987543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.2e-27  Score=242.79  Aligned_cols=151  Identities=31%  Similarity=0.402  Sum_probs=132.9

Q ss_pred             cCcccceeeccCCcEEEEEEEec----CCcEEEEEEecccc----cccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK----DGQEIAVKRLSKAS----GQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~----~g~~vAVK~l~~~~----~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~  551 (649)
                      ++|++.++||+|+||+||+|+..    +|+.||||.+++..    ....+.+.+|++++.+++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            56999999999999999999852    58899999986432    2345678999999999965 899999999999999


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+.+|+|.+++..   ...+.......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~---~~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eeeeeecccccHHHHHHHh---cccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchh
Confidence            9999999999999999853   345678888999999999999999988   9999999999999999999999999999


Q ss_pred             eeCCCC
Q 006347          632 IFGGNQ  637 (649)
Q Consensus       632 ~~~~~~  637 (649)
                      .+....
T Consensus       178 ~~~~~~  183 (322)
T d1vzoa_         178 EFVADE  183 (322)
T ss_dssp             ECCGGG
T ss_pred             hhcccc
Confidence            875433

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=4.4e-26  Score=233.32  Aligned_cols=161  Identities=20%  Similarity=0.329  Sum_probs=135.4

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCC-CCccceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQH-RNLVRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.++||+|+||+||+|+.. +|+.||||.++...  ..+.+.+|++++..++| +|++.+++++.++...++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            67999999999999999999976 68999999885432  33567889999999964 8999999999999999999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcC-----CCceEEEecCCceee
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDE-----ELNPKISDFGMAKIF  633 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~Ki~DFGla~~~  633 (649)
                      + +++|.+++..  ....+++.++..++.|++.||+|||+.+   ||||||||+|||++.     ++.+||+|||+|+.+
T Consensus        83 ~-~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          83 L-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             C-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             c-CCCHHHHHHh--hccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            9 7899998854  3346899999999999999999999988   999999999999974     567999999999997


Q ss_pred             CCCCCc-----cccCceeecC
Q 006347          634 GGNQDQ-----ADTGRVVGTL  649 (649)
Q Consensus       634 ~~~~~~-----~~~~~~~GT~  649 (649)
                      ......     .....++||+
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~  177 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTA  177 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCT
T ss_pred             ccCccccceeecccCceEEch
Confidence            543222     1233467875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.9e-26  Score=236.03  Aligned_cols=162  Identities=28%  Similarity=0.435  Sum_probs=130.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-C-CcEEEEEEecccc--cccHHHHHHHHHHHhcC---CCCCccceEEEEEe----
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-D-GQEIAVKRLSKAS--GQGLEEFMNEVMVISKL---QHRNLVRLLGCCVE----  548 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~-g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~----  548 (649)
                      .++|++.++||+|+||+||+|+.. + ++.||||+++...  ......+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            468999999999999999999974 4 6679999986432  22344567788777665   79999999999864    


Q ss_pred             -CCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEec
Q 006347          549 -GEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDF  627 (649)
Q Consensus       549 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DF  627 (649)
                       ....+++|||++++.+......  ....+++.....++.|++.||+|||+++   ||||||||+|||+++++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCceEEEEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecch
Confidence             2367899999998877655432  3456899999999999999999999988   999999999999999999999999


Q ss_pred             CCceeeCCCCCccccCceeecC
Q 006347          628 GMAKIFGGNQDQADTGRVVGTL  649 (649)
Q Consensus       628 Gla~~~~~~~~~~~~~~~~GT~  649 (649)
                      |+++......   ......||+
T Consensus       161 g~~~~~~~~~---~~~~~~gT~  179 (305)
T d1blxa_         161 GLARIYSFQM---ALTSVVVTL  179 (305)
T ss_dssp             CSCCCCCGGG---GGCCCCCCC
T ss_pred             hhhhhhcccc---cCCCcccCh
Confidence            9999764332   223456664

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.1e-25  Score=228.88  Aligned_cols=161  Identities=24%  Similarity=0.421  Sum_probs=128.7

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc-cceEEEEEeCCeEEEEEec
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL-VRLLGCCVEGEEKMLIYEY  558 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey  558 (649)
                      ++|++.+.||+|+||.||+|+.. +|+.||||.+....  ..+++..|++++++++|+|+ +.+.++..+++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            46999999999999999999875 68999999886533  33568899999999977665 4555666778889999999


Q ss_pred             CCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEc---CCCceEEEecCCceeeCC
Q 006347          559 MPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLD---EELNPKISDFGMAKIFGG  635 (649)
Q Consensus       559 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~Ki~DFGla~~~~~  635 (649)
                      + +++|.+.+..  ....+++..+..++.|+++||+|||+++   ||||||||+|||++   .+..+||+|||+|+.+..
T Consensus        85 ~-~~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          85 L-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             C-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             c-CCchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            9 5566666533  3456899999999999999999999988   99999999999986   356799999999999854


Q ss_pred             CCCc-----cccCceeecC
Q 006347          636 NQDQ-----ADTGRVVGTL  649 (649)
Q Consensus       636 ~~~~-----~~~~~~~GT~  649 (649)
                      ....     .....+.||+
T Consensus       159 ~~~~~~~~~~~~~~~~gt~  177 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTA  177 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCS
T ss_pred             cccccceeccccCCcCCCc
Confidence            4322     1233456774

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.8e-26  Score=237.60  Aligned_cols=148  Identities=28%  Similarity=0.417  Sum_probs=126.1

Q ss_pred             hcCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEeC-----Ce
Q 006347          480 TNNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVEG-----EE  551 (649)
Q Consensus       480 ~~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~  551 (649)
                      .++|++.++||+|+||+||+|+.. +|+.||||++++..  ....+++.+|+.++++++|+|+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            467999999999999999999965 79999999997543  23456789999999999999999999998743     34


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++++||+.+|+|.+++..    ..+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+|++|||+|.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhc
Confidence            4677788889999999843    46999999999999999999999998   9999999999999999999999999998


Q ss_pred             eeC
Q 006347          632 IFG  634 (649)
Q Consensus       632 ~~~  634 (649)
                      ...
T Consensus       170 ~~~  172 (348)
T d2gfsa1         170 HTD  172 (348)
T ss_dssp             CCT
T ss_pred             ccC
Confidence            764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.2e-25  Score=232.27  Aligned_cols=146  Identities=27%  Similarity=0.399  Sum_probs=121.0

Q ss_pred             cCcccceeeccCCcEEEEEEEec-CCcEEEEEEecccc--cccHHHHHHHHHHHhcCCCCCccceEEEEEe------CCe
Q 006347          481 NNFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKAS--GQGLEEFMNEVMVISKLQHRNLVRLLGCCVE------GEE  551 (649)
Q Consensus       481 ~~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~  551 (649)
                      ++|++.++||+|+||+||+|... +|+.||||++....  ....+++.+|+.++++++|||||++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            57999999999999999999976 69999999997532  3345678999999999999999999999964      367


Q ss_pred             EEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEEecCCce
Q 006347          552 KMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMAK  631 (649)
Q Consensus       552 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~  631 (649)
                      .++||||+.++.+. .+.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||+++
T Consensus        97 ~~iv~Ey~~~~l~~-~~~-----~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          97 VYLVMELMDANLCQ-VIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEECCSEEHHH-HHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eEEEEeccchHHHH-hhh-----cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhh
Confidence            89999999765554 442     34789999999999999999999998   9999999999999999999999999999


Q ss_pred             eeCC
Q 006347          632 IFGG  635 (649)
Q Consensus       632 ~~~~  635 (649)
                      ....
T Consensus       168 ~~~~  171 (355)
T d2b1pa1         168 TAGT  171 (355)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.85  E-value=8.9e-22  Score=187.95  Aligned_cols=135  Identities=19%  Similarity=0.216  Sum_probs=106.7

Q ss_pred             ccceeeccCCcEEEEEEEecCCcEEEEEEeccccc------------------ccHHHHHHHHHHHhcCCCCCccceEEE
Q 006347          484 QLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASG------------------QGLEEFMNEVMVISKLQHRNLVRLLGC  545 (649)
Q Consensus       484 ~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~niv~l~g~  545 (649)
                      .+.++||+|+||+||+|+..+|++||||.++....                  .....+..|...+.+++|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            45689999999999999998899999998653110                  012334568889999999999998865


Q ss_pred             EEeCCeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCcEEEcCCCceEEE
Q 006347          546 CVEGEEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDSRLRIIHRDLKASNILLDEELNPKIS  625 (649)
Q Consensus       546 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~Ki~  625 (649)
                      .    ..+++|||+++..+.++          +......++.|++++|.|||+.+   |+||||||+|||++++ .++|+
T Consensus        83 ~----~~~lvme~~~~~~~~~l----------~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~-~~~li  144 (191)
T d1zara2          83 E----GNAVLMELIDAKELYRV----------RVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEE-GIWII  144 (191)
T ss_dssp             E----TTEEEEECCCCEEGGGC----------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETT-EEEEC
T ss_pred             c----CCEEEEEeeccccccch----------hhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCC-CEEEE
Confidence            2    23799999988665332          23334578999999999999988   9999999999999965 58999


Q ss_pred             ecCCceeeCCC
Q 006347          626 DFGMAKIFGGN  636 (649)
Q Consensus       626 DFGla~~~~~~  636 (649)
                      |||+|+....+
T Consensus       145 DFG~a~~~~~~  155 (191)
T d1zara2         145 DFPQSVEVGEE  155 (191)
T ss_dssp             CCTTCEETTST
T ss_pred             ECCCcccCCCC
Confidence            99999987543

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.84  E-value=6.2e-21  Score=165.26  Aligned_cols=112  Identities=17%  Similarity=0.422  Sum_probs=93.1

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      +|+|.+||.|..|++|+|  |.|+|.|+.+++     |.++.    ..++||.||++.|..  ++.|+|+.||+|+|+|.
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~~   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS--GCVLKMQNDGNLVIYSG   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS--SEEEEECTTSCEEEEET
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc----CCcEEEEccCccCCC--CcEEEEeccccEEEEec
Confidence            489999999999999985  999999998876     33443    368999999998754  46899999999999997


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcc
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTD  150 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTD  150 (649)
                       +.++|++++.. .....+|+|+|+|||||++. ++.++|||+.+|++
T Consensus        68 -~~~~w~s~t~~-~~~~~~l~L~ddGNlvly~~-~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 -SRAIWASNTNR-QNGNYYLILQRDRNVVIYDN-SNNAIWATHTNVGN  112 (112)
T ss_dssp             -TEEEEECCCCC-SCCCCEEEECTTSCEEEECT-TSCEEEECCCCCCC
T ss_pred             -CCeEEEEeecc-CCCceEEEEcCCCCEEEECC-CCcEEecCCCccCC
Confidence             56788877652 33456899999999999985 56789999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=7.3e-21  Score=199.80  Aligned_cols=150  Identities=21%  Similarity=0.295  Sum_probs=119.7

Q ss_pred             CcccceeeccCCcEEEEEEEec-CCcEEEEEEecccccccHHHHHHHHHHHhcCC-----------CCCccceEEEEEeC
Q 006347          482 NFQLSSKLGQGGFGPVYWGRLK-DGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-----------HRNLVRLLGCCVEG  549 (649)
Q Consensus       482 ~f~~~~~LG~G~fG~Vykg~~~-~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~~  549 (649)
                      +|++.++||+|+||+||+|+.. +|+.||||++++.. ...+.+.+|+.++++++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            5899999999999999999975 79999999997542 34567788999888875           57899999988653


Q ss_pred             --CeEEEEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCc-----
Q 006347          550 --EEKMLIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELN-----  621 (649)
Q Consensus       550 --~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~-----  621 (649)
                        ...+++|+++..+..............+++..+..++.||++||+|||+ .+   |+||||||+|||++.++.     
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCcccccc
Confidence              4566777776655443333222345678899999999999999999998 55   999999999999986653     


Q ss_pred             -eEEEecCCceeeCC
Q 006347          622 -PKISDFGMAKIFGG  635 (649)
Q Consensus       622 -~Ki~DFGla~~~~~  635 (649)
                       +|++|||.|+....
T Consensus       170 ~~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         170 QIKIADLGNACWYDE  184 (362)
T ss_dssp             EEEECCCTTCEETTB
T ss_pred             eeeEeeccccccccc
Confidence             89999999997643

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.83  E-value=2.1e-20  Score=160.58  Aligned_cols=107  Identities=18%  Similarity=0.337  Sum_probs=90.1

Q ss_pred             ccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCC
Q 006347           24 SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQ  103 (649)
Q Consensus        24 ~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~  103 (649)
                      |+|.+||.|.+|++|.+  |.|.|+|..+++     | +.|.   ..++||+||++.|+. ..+.|.|+.||+|+|+|++
T Consensus         2 ~~L~~g~~L~~g~~l~~--g~~~l~~q~dgn-----L-vl~~---~~~~vW~ant~~~~~-~~~~l~l~~dGnLvl~~~~   69 (109)
T d1kj1a_           2 NLLTNGEGLYAGQSLDV--EPYHFIMQEDCN-----L-VLYD---HSTSVWASNTGILGK-KGCKAVLQSDGNFVVYDAE   69 (109)
T ss_dssp             CEEETTCEEETTCEEEE--TTEEEEECTTSC-----E-EEEE---TTEEEEECCCCCTTC-CCCEEEECTTSCEEEECSS
T ss_pred             CCccCCCEEeCCCEEEe--CCEEEEecCCCe-----E-EEEe---CCEEEEEeCCCCCCc-eeEEEEEcCCceEEEEeCC
Confidence            78999999999999975  889999988775     2 3343   358999999999986 4578999999999999999


Q ss_pred             ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCC
Q 006347          104 KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQE  147 (649)
Q Consensus       104 ~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~  147 (649)
                      |.++|+|+++ .+....+|+|+|+|||||+++    .+|||+-|
T Consensus        70 g~~vW~s~t~-~~~~~~~l~L~ddGNlvly~~----~~W~S~t~  108 (109)
T d1kj1a_          70 GRSLWASHSV-RGNGNYVLVLQEDGNVVIYGS----DIWSTGTY  108 (109)
T ss_dssp             SCEEEECCCC-CCSSCCEEEECTTSCEEEECC----EEEECCCC
T ss_pred             CcEEEEEeeE-CCCCCEEEEEeCCCcEEEECC----CEecCCCc
Confidence            9999999986 334456799999999999963    59999865

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.82  E-value=1.8e-20  Score=160.87  Aligned_cols=107  Identities=20%  Similarity=0.315  Sum_probs=90.1

Q ss_pred             cccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcC
Q 006347           23 DSSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNG  102 (649)
Q Consensus        23 ~~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~  102 (649)
                      .|+|.+||.|.+|+.|.  +|.|.|.|+.+|+     |.|+.    ..++||.||++.|.  +.+.|.++.+|+|+|+++
T Consensus         1 ~~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~~~   67 (108)
T d1jpca_           1 DNILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGLS--RSCFLSMQTDGNLVVYNP   67 (108)
T ss_dssp             CCEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             CCCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEe----CCceeeEeCCCCCC--CccEEEEeccceEEEECC
Confidence            37899999999999996  5999999998886     34554    25889999999874  356899999999999999


Q ss_pred             CceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCC
Q 006347          103 QKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQE  147 (649)
Q Consensus       103 ~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~  147 (649)
                      +|.++|++++. ......+|+|+|+|||||++.    ++||||+|
T Consensus        68 ~g~~vWsS~t~-~~~~~~~l~L~ddGNlVly~~----~~W~S~t~  107 (108)
T d1jpca_          68 SNKPIWASNTG-GQNGNYVCILQKDRNVVIYGT----DRWATGTH  107 (108)
T ss_dssp             TCCEEEECCCC-CSCSCEEEEECTTSCEEEEEC----CCCCCCCC
T ss_pred             CccceEEcccc-CCCCcEEEEEcCCCCEEEeCC----CcccCCCC
Confidence            99999999876 333455789999999999963    49999987

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.70  E-value=7.9e-18  Score=146.67  Aligned_cols=109  Identities=22%  Similarity=0.336  Sum_probs=88.2

Q ss_pred             EEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCce
Q 006347           61 GIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAI  140 (649)
Q Consensus        61 gIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~  140 (649)
                      .|||.++++++.+|++|++.|+.....+|.|+.||||+|++. +.++|++++.. ......|+|+|+|||||++. ++++
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~-~~~~~~~~l~~~GnLvl~d~-~~~~   87 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAG-KGTGCRAVLQPNGRMDVLTN-QNIA   87 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCS-SCSSCEEEEETTTEEEEEET-TTEE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEcccc-CCCcEEEEEeCCeeEEEEcC-CCCE
Confidence            599999999999999999999987667899999999999987 67899998863 23456899999999999986 5789


Q ss_pred             EeeecCCCcccccCCCcccccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeee
Q 006347          141 VWESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWR  207 (649)
Q Consensus       141 ~WqSFD~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~  207 (649)
                      +|||+.                               +.++|.|.+.++++|+..+  |.  .++|.
T Consensus        88 lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvl--Y~--~~~W~  119 (120)
T d1dlpa2          88 VWTSGN-------------------------------SRSAGRYVFVLQPDRNLAI--YG--GALWT  119 (120)
T ss_dssp             EEECCC-------------------------------CCSSSCCEEEECSSSCEEE--EC--CCCCB
T ss_pred             EEEeCC-------------------------------CCCCCcEEEEECCCCcEEE--eC--CCccc
Confidence            999973                               2356788999999998554  42  35665

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.64  E-value=7.7e-17  Score=138.87  Aligned_cols=111  Identities=25%  Similarity=0.352  Sum_probs=92.0

Q ss_pred             EEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceE
Q 006347           62 IWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIV  141 (649)
Q Consensus        62 Iw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~  141 (649)
                      |||.-.++.+..|+.+.+.++.+...+|.|+.||||+|+++ +.++|++++.+  ..++.|.|+|+|||||++. ++++|
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~--~~~~~l~l~~dGNLvl~d~-~~~~v   78 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAG--ATGCRAVLQSDGLLVILTA-QNTIR   78 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCS--CSCCBCCBCSSSCBCCBCT-TTCCS
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCC--CCceEEEEeccCCEEEEcc-CCCEE
Confidence            77877777788899999999987778999999999999985 67899998863  3468899999999999985 56789


Q ss_pred             eeecCCCcccccCCCcccccccCCceeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCC
Q 006347          142 WESFQEPTDSFLPGMHHGIDQRTGKKVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPW  211 (649)
Q Consensus       142 WqSFD~PTDTlLpg~~l~~~~~~g~~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~  211 (649)
                      |||+.                               +.+.|.|.|.|+++|+..  +|  +.++|.+|+-
T Consensus        79 WsS~t-------------------------------~~~~g~y~l~Lq~DGNlv--lY--~~~~Wssgt~  113 (115)
T d1dlpa1          79 WSSGT-------------------------------KGSIGNYVLVLQPDRTVT--IY--GPGLWDSGTS  113 (115)
T ss_dssp             CCCCC-------------------------------CCCSSCCEEEECSSSCEE--EE--CSEEEECSCC
T ss_pred             EEcCC-------------------------------CCCCCCEEEEECCCCcEE--Ee--CCCeecCCCC
Confidence            99863                               346889999999999854  44  3579999863

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.59  E-value=4e-15  Score=128.88  Aligned_cols=103  Identities=17%  Similarity=0.324  Sum_probs=80.7

Q ss_pred             ccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCC
Q 006347           24 SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQ  103 (649)
Q Consensus        24 ~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~  103 (649)
                      .+|.++|+|    ...+..|.|.|.|..+|+      -+.|..   .++||.||+..|..  .+.|.|+.||+|+|.|++
T Consensus        15 ~~l~~~q~l----~~~~~~~~y~l~mQ~DGN------LVLy~~---~~~vWssnt~~~~~--~~~l~l~~dGnLvL~d~~   79 (119)
T d1b2pa_          15 QILHATESL----EILFGTHVYRFIMQTDCN------LVLYDN---NNPIWATNTGGLGN--GCRAVLQPDGVLVVITNE   79 (119)
T ss_dssp             CEEETTCEE----EEEETTEEEEEEECTTSC------EEEEET---TEEEEECCCTTSCS--SCEEEECTTSCEEEECTT
T ss_pred             CEEeCCCeE----EEecCCceEEEEECCCCc------EEEEEC---CeEEEEecCCCCCc--ceEEEEEeCCCEEEECCC
Confidence            445555554    246679999999999886      234543   67899999987653  478999999999999999


Q ss_pred             ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecC
Q 006347          104 KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQ  146 (649)
Q Consensus       104 ~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD  146 (649)
                      |.+||++++.. .....+|+|+|+|||||++    .++|||-.
T Consensus        80 g~~vWsS~t~~-~~~~~~l~Lq~DGNlvlYg----~~~W~S~T  117 (119)
T d1b2pa_          80 NVTVWQSPVAG-KAGHYVLVLQPDRNVVIYG----DALWATQT  117 (119)
T ss_dssp             CCEEEECSCCC-CSSCEEEEECTTSCEEEEE----SEEEECCC
T ss_pred             CcEEEECCCcC-CCCceEEEEcCCCCEEEEC----CCEeccCC
Confidence            99999998863 3345579999999999995    36999964

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.32  E-value=8.2e-13  Score=113.26  Aligned_cols=100  Identities=17%  Similarity=0.357  Sum_probs=76.5

Q ss_pred             CCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCCceEE
Q 006347           28 SSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQKEVL  107 (649)
Q Consensus        28 ~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~~~~~  107 (649)
                      ..|.|.+++.|  .+|.|.|.|..+|+     |.++ .   ...+||.+|...+   ..+.+.|..||||+|+|.++.+|
T Consensus        13 ~~~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~-~---~~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~~~~~v   78 (115)
T d1dlpa1          13 HPQTLHAAQSL--ELSSFRFTMQSDCN-----LVLF-D---SDVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIR   78 (115)
T ss_dssp             SCSCCCTTCEE--CSTTEEEEECTTSC-----EEEE-E---SSSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCS
T ss_pred             CcceecCCCcE--EcCCEEEEECCCCe-----EEEE-c---CCeeEEEcccCCC---CceEEEEeccCCEEEEccCCCEE
Confidence            34556666666  35889999998876     3343 3   2578999997542   34789999999999999999999


Q ss_pred             EEecCcccccccccceeecccCeEEeeCCCCceEeeecC
Q 006347          108 WSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQ  146 (649)
Q Consensus       108 Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD  146 (649)
                      |++.+.. ..+..+++|+++|||||++    .++|+|-.
T Consensus        79 WsS~t~~-~~g~y~l~Lq~DGNlvlY~----~~~Wssgt  112 (115)
T d1dlpa1          79 WSSGTKG-SIGNYVLVLQPDRTVTIYG----PGLWDSGT  112 (115)
T ss_dssp             CCCCCCC-CSSCCEEEECSSSCEEEEC----SEEEECSC
T ss_pred             EEcCCCC-CCCCEEEEECCCCcEEEeC----CCeecCCC
Confidence            9998863 3345679999999999995    36999853

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.10  E-value=1.7e-10  Score=99.29  Aligned_cols=85  Identities=25%  Similarity=0.425  Sum_probs=66.2

Q ss_pred             eEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCce
Q 006347           88 IITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGKK  167 (649)
Q Consensus        88 ~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~~  167 (649)
                      +|.+..||||||+++ +.++|++++.+ ......+.|.++|||||++. .+.+||+|.-                     
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~-~~~~~~l~l~~dGnLvL~d~-~g~~vWsS~t---------------------   88 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGG-LGNGCRAVLQPDGVLVVITN-ENVTVWQSPV---------------------   88 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTT-SCSSCEEEECTTSCEEEECT-TCCEEEECSC---------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCC-CCcceEEEEEeCCCEEEECC-CCcEEEECCC---------------------
Confidence            688999999999986 67899999873 23457899999999999985 5678998631                     


Q ss_pred             eEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          168 VQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       168 ~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                .-+.|.|.+.|+.+|+..+  +.  .+.|.|++
T Consensus        89 ----------~~~~~~~~l~Lq~DGNlvl--Yg--~~~W~S~T  117 (119)
T d1b2pa_          89 ----------AGKAGHYVLVLQPDRNVVI--YG--DALWATQT  117 (119)
T ss_dssp             ----------CCCSSCEEEEECTTSCEEE--EE--SEEEECCC
T ss_pred             ----------cCCCCceEEEEcCCCCEEE--EC--CCEeccCC
Confidence                      1135678899999998555  42  47899876

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.09  E-value=1.1e-10  Score=100.77  Aligned_cols=97  Identities=16%  Similarity=0.378  Sum_probs=70.6

Q ss_pred             ccccCCCCcCCCCeEEeCCCeeeEeeeCCCCCCceEEEEEEecCCCCcEEEEecCCCCCCCCcceEEEeeCCcEEEEcCC
Q 006347           24 SSITSSQLIRDPDAILSNGSNFKLGFFNPADSPYRYMGIWYDMPSEKAVIWVANRDNPLKDSSGIITISEDGNLVLVNGQ  103 (649)
Q Consensus        24 ~~l~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~vW~Anr~~pv~~~~~~l~~~~~G~L~l~~~~  103 (649)
                      ++|.++++|..        |.|.|.|...|+     |.| |.   ...+||.++...  .+..+.+.|..+|||+|+|.+
T Consensus        24 ~~l~~~q~l~~--------g~y~L~~q~DGN-----LvL-~~---~~~~vW~s~t~~--~~~~~~~~l~~~GnLvl~d~~   84 (120)
T d1dlpa2          24 QTLHATQSLQL--------SPYRLSMETDCN-----LVL-FD---RDDRVWSTNTAG--KGTGCRAVLQPNGRMDVLTNQ   84 (120)
T ss_dssp             CEECSSCCCBC--------SSCEEEEETTTE-----EEE-EB---TTBCCSCCCCCS--SCSSCEEEEETTTEEEEEETT
T ss_pred             cEEcCCCeeEc--------CCEEEEEcCCCc-----EEE-ec---CCcEEEEEcccc--CCCcEEEEEeCCeeEEEEcCC
Confidence            35555555543        668888876664     233 32   246789988543  334578999999999999999


Q ss_pred             ceEEEEecCcccccccccceeecccCeEEeeCCCCceEeee
Q 006347          104 KEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWES  144 (649)
Q Consensus       104 ~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqS  144 (649)
                      +.++|+|++.. ......+.|+++|||||++    .++|.|
T Consensus        85 ~~~lW~S~t~~-~~~~~~l~Lq~DGnlvlY~----~~~W~t  120 (120)
T d1dlpa2          85 NIAVWTSGNSR-SAGRYVFVLQPDRNLAIYG----GALWTT  120 (120)
T ss_dssp             TEEEEECCCCC-SSSCCEEEECSSSCEEEEC----CCCCBC
T ss_pred             CCEEEEeCCCC-CCCcEEEEECCCCcEEEeC----CCcccC
Confidence            99999999863 2345578999999999995    258976

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.07  E-value=3.5e-10  Score=95.84  Aligned_cols=88  Identities=27%  Similarity=0.445  Sum_probs=67.6

Q ss_pred             ceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           87 GIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        87 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      -.|.|..||||+|+.. +.+||++++......+..+.|.++|||||++. +++++|+|=                     
T Consensus        21 ~~l~~q~dgnLvl~~~-~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~-~g~~vW~s~---------------------   77 (109)
T d1kj1a_          21 YHFIMQEDCNLVLYDH-STSVWASNTGILGKKGCKAVLQSDGNFVVYDA-EGRSLWASH---------------------   77 (109)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCCCEEEECTTSCEEEECS-SSCEEEECC---------------------
T ss_pred             EEEEecCCCeEEEEeC-CEEEEEeCCCCCCceeEEEEEcCCceEEEEeC-CCcEEEEEe---------------------
Confidence            5689999999999875 68999999874444467799999999999985 578899871                     


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCCC
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGPW  211 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~~  211 (649)
                                +....|.|.+.|+++|+..+  +.  .+.|.|+++
T Consensus        78 ----------t~~~~~~~~l~L~ddGNlvl--y~--~~~W~S~t~  108 (109)
T d1kj1a_          78 ----------SVRGNGNYVLVLQEDGNVVI--YG--SDIWSTGTY  108 (109)
T ss_dssp             ----------CCCCSSCCEEEECTTSCEEE--EC--CEEEECCCC
T ss_pred             ----------eECCCCCEEEEEeCCCcEEE--EC--CCEecCCCc
Confidence                      11135678899999998544  43  468988764

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.00  E-value=5.8e-10  Score=94.36  Aligned_cols=86  Identities=24%  Similarity=0.451  Sum_probs=65.1

Q ss_pred             ceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           87 GIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        87 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      -+|.++.||||+|++. +.+||++++.+. .....++|+++|||||++. ++.+||+|=                     
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~-~~~~~l~l~~~Gnlvl~~~-~g~~vWsS~---------------------   76 (108)
T d1jpca_          21 FVFIMQEDCNLVLYDV-DKPIWATNTGGL-SRSCFLSMQTDGNLVVYNP-SNKPIWASN---------------------   76 (108)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTS-CSSCEEEECTTSCEEEECT-TCCEEEECC---------------------
T ss_pred             EEEEECCCCeEEEEeC-CceeeEeCCCCC-CCccEEEEeccceEEEECC-CccceEEcc---------------------
Confidence            5799999999999985 689999998732 3356799999999999985 578899861                     


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcCCeeeeecCC
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNVSRPYWRSGP  210 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~~~~yw~sg~  210 (649)
                                +....+.|.+.|+.+|+..+  +.  .+.|.|+.
T Consensus        77 ----------t~~~~~~~~l~L~ddGNlVl--y~--~~~W~S~t  106 (108)
T d1jpca_          77 ----------TGGQNGNYVCILQKDRNVVI--YG--TDRWATGT  106 (108)
T ss_dssp             ----------CCCSCSCEEEEECTTSCEEE--EE--CCCCCCCC
T ss_pred             ----------ccCCCCcEEEEEcCCCCEEE--eC--CCcccCCC
Confidence                      11235678888999998554  43  35787764

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.79  E-value=1.5e-08  Score=86.17  Aligned_cols=87  Identities=20%  Similarity=0.424  Sum_probs=65.1

Q ss_pred             ceEEEeeCCcEEEEcCCceEEEEecCcccccccccceeecccCeEEeeCCCCceEeeecCCCcccccCCCcccccccCCc
Q 006347           87 GIITISEDGNLVLVNGQKEVLWSSNVSNLVNNSTSAQLLDSGNLVLRDNINRAIVWESFQEPTDSFLPGMHHGIDQRTGK  166 (649)
Q Consensus        87 ~~l~~~~~G~L~l~~~~~~~~Wss~~~~~~~~~~~a~LldsGNlVl~~~~~~~~~WqSFD~PTDTlLpg~~l~~~~~~g~  166 (649)
                      -.|.|+.||||+|++. +.+||++++.. ...++.+.|..+|||||++.  +.++|.|                      
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~-~~~~~~l~l~~dGnLvl~~~--~~~~w~s----------------------   74 (112)
T d1xd5a_          21 YLFIIQNDCNLVLYDN-NRAVWASGTNG-KASGCVLKMQNDGNLVIYSG--SRAIWAS----------------------   74 (112)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTT-SCSSEEEEECTTSCEEEEET--TEEEEEC----------------------
T ss_pred             EEEEEcCCCCEEEEcC-CcEEEEccCcc-CCCCcEEEEeccccEEEEec--CCeEEEE----------------------
Confidence            5799999999999975 68999998763 23457899999999999984  4567765                      


Q ss_pred             eeEEEEcccCCCCCCceeEEeeeCCCccEEEEEcC-CeeeeecCC
Q 006347          167 KVQLTSWKSLSDPSTGSFSAGLIHQNIPEIFVWNV-SRPYWRSGP  210 (649)
Q Consensus       167 ~~~L~S~~s~~dps~G~f~l~~~~~~~~~~~~~~~-~~~yw~sg~  210 (649)
                               ...-..|.|.+.++.+|+..  +++. +.+.|.|++
T Consensus        75 ---------~t~~~~~~~~l~L~ddGNlv--ly~~~~~~~W~S~t  108 (112)
T d1xd5a_          75 ---------NTNRQNGNYYLILQRDRNVV--IYDNSNNAIWATHT  108 (112)
T ss_dssp             ---------CCCCSCCCCEEEECTTSCEE--EECTTSCEEEECCC
T ss_pred             ---------eeccCCCceEEEEcCCCCEE--EECCCCcEEecCCC
Confidence                     11123466889999999854  4443 567899875

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.59  E-value=2.2e-07  Score=90.78  Aligned_cols=149  Identities=15%  Similarity=0.064  Sum_probs=105.3

Q ss_pred             HHHHHhcCcccceeeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEE
Q 006347          475 ELATATNNFQLSSKLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKM  553 (649)
Q Consensus       475 ~l~~~~~~f~~~~~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~  553 (649)
                      ++...-..|+..+..+-++...||+.... ++.+.||+...........+.+|...+..+. +--+.+++.+..+++..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            45555566765544443445689988754 5667888876554445556788888887774 555788999988899999


Q ss_pred             EEEecCCCCChhhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 006347          554 LIYEYMPNRSLDALLFDPLKKERLDWRKRFNIIEGISRGLLYLHRDS---------------------------------  600 (649)
Q Consensus       554 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------  600 (649)
                      +|||++++..+.+.....     ..   ...++.++++.++.||+..                                 
T Consensus        87 lv~~~l~G~~~~~~~~~~-----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE-----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC-----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             EEEEeccccccccccccc-----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            999999998886654211     11   2235566666677777421                                 


Q ss_pred             -----------------------CCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          601 -----------------------RLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       601 -----------------------~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                                             ...++|+|+.|.|||++++..+-|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                   11279999999999999887778999999876

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.08  E-value=7.9e-06  Score=78.81  Aligned_cols=131  Identities=18%  Similarity=0.173  Sum_probs=89.3

Q ss_pred             eeccCCc-EEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCC--CCCccceEEEEEeCCeEEEEEecCCCCCh
Q 006347          488 KLGQGGF-GPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQ--HRNLVRLLGCCVEGEEKMLIYEYMPNRSL  564 (649)
Q Consensus       488 ~LG~G~f-G~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gsL  564 (649)
                      .+..|.. ..||+....++..+.+|.-...   ....+..|...++.+.  ...+.+++++..+++..++|||++++.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4555553 6799999888888888976433   2345677887777663  34577889988888899999999998766


Q ss_pred             hhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Q 006347          565 DALLFDPLKKERLDWRKRFNIIEGISRGLLYLHR----------------------------------------------  598 (649)
Q Consensus       565 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~----------------------------------------------  598 (649)
                      .+..        ...   ..++.++++.|+-||+                                              
T Consensus        94 ~~~~--------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          94 LSSH--------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             TTSC--------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             cccc--------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHH
Confidence            3321        110   1122233333333332                                              


Q ss_pred             -----C----CCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          599 -----D----SRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       599 -----~----~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                           .    ..+.++|+|+.|.|||++++..+-|+||+.+..
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                 1    112379999999999999887788999999876

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.49  E-value=0.00022  Score=73.36  Aligned_cols=76  Identities=12%  Similarity=0.177  Sum_probs=49.8

Q ss_pred             ceeeccCCcEEEEEEEecC-CcEEEEEEeccc-------ccccHHHHHHHHHHHhcC-CC--CCccceEEEEEeCCeEEE
Q 006347          486 SSKLGQGGFGPVYWGRLKD-GQEIAVKRLSKA-------SGQGLEEFMNEVMVISKL-QH--RNLVRLLGCCVEGEEKML  554 (649)
Q Consensus       486 ~~~LG~G~fG~Vykg~~~~-g~~vAVK~l~~~-------~~~~~~~f~~E~~~l~~l-~H--~niv~l~g~~~~~~~~~l  554 (649)
                      .+.||.|..-.||+....+ ++.++||.-...       -+....+...|.+.+..+ .+  ..+++++.+  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            3579999999999998764 678999964321       011233456688777766 23  346666654  5666789


Q ss_pred             EEecCCCCC
Q 006347          555 IYEYMPNRS  563 (649)
Q Consensus       555 V~Ey~~~gs  563 (649)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0036  Score=62.05  Aligned_cols=135  Identities=15%  Similarity=0.189  Sum_probs=79.0

Q ss_pred             EEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCCc--cceE-----EEEEeCCeEEEEEecCCCCChhh-
Q 006347          495 GPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRNL--VRLL-----GCCVEGEEKMLIYEYMPNRSLDA-  566 (649)
Q Consensus       495 G~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~ni--v~l~-----g~~~~~~~~~lV~Ey~~~gsL~~-  566 (649)
                      -.||+.+..+|+.+++|..+.. ....+++..|...+..|...++  +..+     .........+.++++++|..+.. 
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            4799999999999999987542 3456778889888877742222  1111     12234566789999998644311 


Q ss_pred             ----h------h---c----C--CCCCCCCCHHH-------------------HHHHHHHHHHHHHHHHh----CCCCce
Q 006347          567 ----L------L---F----D--PLKKERLDWRK-------------------RFNIIEGISRGLLYLHR----DSRLRI  604 (649)
Q Consensus       567 ----~------l---~----~--~~~~~~l~~~~-------------------~~~i~~~ia~gL~yLH~----~~~~~i  604 (649)
                          +      +   +    .  ......+++..                   +-.+...+.+.++.+..    ..+..+
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence                1      0   0    0  01111222111                   11122222233333322    234468


Q ss_pred             EecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          605 IHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       605 iHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ||+|+.+.|||++++  ..++||+-+..
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ecCCCCcccEEEeCC--ceEEechhccc
Confidence            999999999999754  45899998875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.19  E-value=0.006  Score=62.18  Aligned_cols=72  Identities=18%  Similarity=0.275  Sum_probs=48.3

Q ss_pred             eeeccCCcEEEEEEEecCC--------cEEEEEEecccccccHHHHHHHHHHHhcCC-CCCccceEEEEEeCCeEEEEEe
Q 006347          487 SKLGQGGFGPVYWGRLKDG--------QEIAVKRLSKASGQGLEEFMNEVMVISKLQ-HRNLVRLLGCCVEGEEKMLIYE  557 (649)
Q Consensus       487 ~~LG~G~fG~Vykg~~~~g--------~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E  557 (649)
                      +.|+.|-.=.+|+....++        ..|.++..- . ........+|..+++.+. |.-..++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            5788788889999987543        446555543 2 223345567888888884 4334578887642    68999


Q ss_pred             cCCCCCh
Q 006347          558 YMPNRSL  564 (649)
Q Consensus       558 y~~~gsL  564 (649)
                      |+++..|
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987555

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.67  E-value=0.46  Score=45.59  Aligned_cols=159  Identities=12%  Similarity=0.028  Sum_probs=82.2

Q ss_pred             CCHHHHHHHhcCcccce-----eeccCCcEEEEEEEecCCcEEEEEEecccccccHHHHHHHHHHHhcCCCCC--ccceE
Q 006347          471 FQFEELATATNNFQLSS-----KLGQGGFGPVYWGRLKDGQEIAVKRLSKASGQGLEEFMNEVMVISKLQHRN--LVRLL  543 (649)
Q Consensus       471 ~~~~~l~~~~~~f~~~~-----~LG~G~fG~Vykg~~~~g~~vAVK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~  543 (649)
                      .+.++++....+|.+.+     .|..|---+.|+.+..+|+ +++|+.+...  ..++...|+.++..+.+.+  +...+
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence            34566777777776643     3445666788998877654 7888875431  2344555666666663222  11111


Q ss_pred             E------EEEeCCeEEEEEecCCCCChhhhh--------------c------CCCC-CCCCCH-----------------
Q 006347          544 G------CCVEGEEKMLIYEYMPNRSLDALL--------------F------DPLK-KERLDW-----------------  579 (649)
Q Consensus       544 g------~~~~~~~~~lV~Ey~~~gsL~~~l--------------~------~~~~-~~~l~~-----------------  579 (649)
                      .      +.........++.++++......-              +      .... .....+                 
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            1      122344566777777654332110              0      0000 000000                 


Q ss_pred             HHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCcEEEcCCCceEEEecCCcee
Q 006347          580 RKRFNIIEGISRGLLYLHR-DSRLRIIHRDLKASNILLDEELNPKISDFGMAKI  632 (649)
Q Consensus       580 ~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDlkp~NILl~~~~~~Ki~DFGla~~  632 (649)
                      ......+..+...+.-.+. .-+.++||+|+.+.||+++.+...-|.||+.+..
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            0111111122222222221 1233599999999999999988889999998864

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.034  Score=34.42  Aligned_cols=31  Identities=45%  Similarity=0.977  Sum_probs=25.0

Q ss_pred             cCCccccccCCcccccCC-CCCcccCCCCCccC
Q 006347          272 TECDVYGKCGAFGICNSQ-EKPICSCLEGFEPK  303 (649)
Q Consensus       272 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~gf~~~  303 (649)
                      |.|.+-..||. |.|+.- ..-.|.|-.||+|.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSCCC
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcCCC
Confidence            68999999985 889753 34469999999976

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.32  E-value=0.13  Score=33.81  Aligned_cols=30  Identities=30%  Similarity=0.755  Sum_probs=23.8

Q ss_pred             cCCcc-ccccCCcccccCCC-CCcccCCCCCc
Q 006347          272 TECDV-YGKCGAFGICNSQE-KPICSCLEGFE  301 (649)
Q Consensus       272 ~~C~~-~~~CG~~g~C~~~~-~~~C~C~~gf~  301 (649)
                      |+|.. ...|..+|.|.... .-.|.|++||+
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~   35 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYT   35 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCc
Confidence            66875 57899999997543 45799999997

>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Hairpin loop containing domain-like
superfamily: Hairpin loop containing domain-like
family: Hairpin loop containing domain
domain: Hepatocyte growth factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.04  E-value=0.26  Score=38.28  Aligned_cols=51  Identities=25%  Similarity=0.548  Sum_probs=33.7

Q ss_pred             CCeeeeccccCCCCcc-----ccCCCChhHHHHHhhcc----CCeEEEEecCCc-eEEEee
Q 006347          338 DGFSKLNKMKVPDFTE-----WTSPATEDECREQCLKN----CSCIAYAFDGGI-GCMVWR  388 (649)
Q Consensus       338 ~~f~~~~~~~~p~~~~-----~~~~~~~~~C~~~Cl~n----CsC~a~~~~~g~-gC~~w~  388 (649)
                      +.|.+..++.+.....     .....+.++|.++|+++    =.|.+|.|.... .|.+-.
T Consensus         5 ~dy~kt~~~~L~~~~~~~~~~~~~~~s~eeCA~rC~~~~~~~f~CrSF~y~~~~~~C~Ls~   65 (91)
T d2qj2a1           5 HEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFP   65 (91)
T ss_dssp             GGEEEETTEEEEECSTTCCCEEEECSCHHHHHHHHHTTTTCSSCCCEEEEETTTTEEEEES
T ss_pred             HhhhhcCCceEeccCccccccccccCCHHHHHHHHHccCCCCceEEeEEEECCCCeEEEcc
Confidence            5666666665533221     22345899999999984    469999997444 487743

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.46  E-value=0.31  Score=31.34  Aligned_cols=31  Identities=39%  Similarity=0.917  Sum_probs=22.8

Q ss_pred             cCCccccccCCcccccCC-CCCcccCCCCCccC
Q 006347          272 TECDVYGKCGAFGICNSQ-EKPICSCLEGFEPK  303 (649)
Q Consensus       272 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~gf~~~  303 (649)
                      |+|. ...|...|.|... ..-.|.|++||+-.
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            4565 4778889999754 35679999999743