Citrus Sinensis ID: 006399

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------
MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEVEKLDVNSTASESISAANLSSTADVRQTTETQPMNPKVSKQPPASIPTNNLSAADISILKRWNRRPTSISKMDLLLLQSRVSSRSMRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK
cccHHHcccccHHHHHHHHHHHHHHHHHHHHHHEEEcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHcccccccccccccccccHHccccccccccccccccccccccccccccHHccccHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEcHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHcccccEEEEcccccccccccHHHcccccccEEEEEccccccccHHHHHHHcccEEEEEEcccccccccccccccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHcEEEccccccccHHHHHHHHHHHHHccccccc
ccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccEEEEEEEcccccHHHccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccHccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEHHHHHHHHHHHccccEEEccHcccEEEEEEEEHHHHHHEccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHcHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHccccccEEccccccccccccHHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHHHEEEEEcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccc
MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKldvavasdeerlepdmdrglmvgvenypnhsfyklkgensfnkgvtddkslnmgyatsldnssteTEAMEIEHGKLEKVEKVgstynfdddpkataglelggvqnraspgdftaevekldvnstasesisaanlsstadvrqttetqpmnpkvskqppasiptnnlsaaDISILKrwnrrptsisKMDLLLLQSRvssrsmrpssssvrdrELLSAKVeienapvswntpelhaSVFRNVSIFKRSYELMESLLKVYIYkegekpifhqpimrgiyaSEGWFMKLMEgnrkfvvrdprkahlfylpfSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRfwnrtggtdhfvvachdwapkftgQHLRNCIKALCNAdvskgfkigmdtslpvtyirsaeapldnlggnpplkrstLAFFAGRMHGYLRPILLNFwenkvddmkifgpmphdvegkrIYREHmksskycicargyevhtpRVVEAIFYECVpviisdnyvppffeVLNWEAFSVFVqekdipnlrNILLSIPEERYLAMQSRVKMVQKHFlwhkkpkkydiFHMVLHSIWYNrlfntrtk
mdiiakfhgscraEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKLdvavasdeerlepdmdrglMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEVEKLDVNSTAsesisaanlsstadvRQTTetqpmnpkvskqppasiptnnlSAADIsilkrwnrrptsiskMDLLLLqsrvssrsmrpssssvrdreLLSAKVEienapvswntpelhaSVFRNVSIFKRSYELMESLLKVYIYKEGekpifhqpiMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEapldnlggnpPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK
MDIIAKFHGSCRAEIRRLLVITGmvvavmvvFQSFSLVTNKGSIvmmvvgnsntsvvnmststKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEVEKLDVNSTASESISAANLSSTADVRQTTETQPMNPKVSKQPPASIPTNNLSAADISILKRWNRRPTSISKMDllllqsrvssrsmrpssssvrdrELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK
**IIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVN*************************LMVGVENYPNHSFYKL***************************************************************************************************************************************ISILKRWN**********LL****************************EIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFN****
********GSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMV***********************************************************************************************************************************************************************************************************************************************PVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYN*LF*****
MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEVEKLDVNS*************************************IPTNNLSAADISILKRWNRRPTSISKMDLLLLQSR****************ELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK
*DIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKLDVAVASD***LE*DMDRGLMVGVENYPNHSFYKLKG*************************************************************************************************************************************************************RVSSRSMRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTR**
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLVTNKGSIVMMVVGNSNTSVVNMSTSTKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFNKGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGLELGGVQNRASPGDFTAEVEKLDVNSTASESISAANLSSTADVRQTTETQPMNPKVSKQPPASIPTNNLSAADISILKRWNRRPTSISKMDLLLLQSRVSSRSMRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSIWYNRLFNTRTK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query647 2.2.26 [Sep-21-2011]
Q9SSE8470 Probable glycosyltransfer no no 0.556 0.765 0.422 8e-87
Q9FFN2518 Probable glycosyltransfer no no 0.519 0.648 0.450 1e-86
Q3E7Q9480 Probable glycosyltransfer no no 0.519 0.7 0.411 3e-75
Q9LFP3480 Probable glycosyltransfer no no 0.519 0.7 0.412 4e-75
Q3E9A4466 Probable glycosyltransfer no no 0.523 0.727 0.394 5e-70
Q3EAR7470 Probable glycosyltransfer no no 0.523 0.721 0.384 4e-69
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.523 0.678 0.387 7e-69
Q33AH8417 Probable glucuronosyltran no no 0.353 0.549 0.3 3e-25
Q8S1X9422 Probable glucuronosyltran no no 0.411 0.630 0.283 4e-25
Q7XLG3420 Probable glucuronosyltran no no 0.474 0.730 0.282 5e-25
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function desciption
 Score =  322 bits (824), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 161/381 (42%), Positives = 244/381 (64%), Gaps = 21/381 (5%)

Query: 276 ELLSAKVEIENAPVSWNTPEL----------HASVFRNVSIFKRSYELMESLLKVYIYKE 325
           EL +A+V I  A +++++             H  ++RN   F RSY LME + K+Y+Y+E
Sbjct: 91  ELATARVLIREAQLNYSSTTSSPLGDEDYVPHGDIYRNPYAFHRSYLLMEKMFKIYVYEE 150

Query: 326 GEKPIFHQPIMRGIYASEGWFMKLMEGN-RKFVVRDPRKAHLFYLPFSSQMLRIALSEQK 384
           G+ PIFH  + + IY+ EG F+  ME +  K+  RDP KAH+++LPFS  M+   L +  
Sbjct: 151 GDPPIFHYGLCKDIYSMEGLFLNFMENDVLKYRTRDPDKAHVYFLPFSVVMILHHLFDPV 210

Query: 385 LQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPK---FTGQHLRNCIKAL 441
           +++   L+  +  YV+ IS+KY +WN + G DHF+++CHDW  +   +  +   N I+ L
Sbjct: 211 VRDKAVLERVIADYVQIISKKYPYWNTSDGFDHFMLSCHDWGHRATWYVKKLFFNSIRVL 270

Query: 442 CNADVSKGFKIGMDTSLPVTYIRSAEAPLDNL-GGNPPLKRSTLAFFAGRMHGYLRPILL 500
           CNA++S+ F    D   P   + + +  ++NL GG  P+ R+TLAFFAG+ HG +RP+LL
Sbjct: 271 CNANISEYFNPEKDAPFPEINLLTGD--INNLTGGLDPISRTTLAFFAGKSHGKIRPVLL 328

Query: 501 NFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPV 560
           N W+ K  D+ ++  +P  ++    Y E M+ S++CIC  G+EV +PRV EAI+  CVPV
Sbjct: 329 NHWKEKDKDILVYENLPDGLD----YTEMMRKSRFCICPSGHEVASPRVPEAIYSGCVPV 384

Query: 561 IISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWH 620
           +IS+NYV PF +VLNWE FSV V  K+IP L+ IL+ IPEERY+ +   VK V++H L +
Sbjct: 385 LISENYVLPFSDVLNWEKFSVSVSVKEIPELKRILMDIPEERYMRLYEGVKKVKRHILVN 444

Query: 621 KKPKKYDIFHMVLHSIWYNRL 641
             PK+YD+F+M++HSIW  RL
Sbjct: 445 DPPKRYDVFNMIIHSIWLRRL 465
May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function description
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8S1X9|GT13_ORYSJ Probable glucuronosyltransferase Os01g0926400 OS=Oryza sativa subsp. japonica GN=Os01g0926400 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query647
359484345665 PREDICTED: probable glycosyltransferase 0.986 0.959 0.575 0.0
147799433 1908 hypothetical protein VITISV_012309 [Viti 0.978 0.331 0.539 0.0
359484343738 PREDICTED: uncharacterized protein LOC10 1.0 0.876 0.452 1e-171
356495238610 PREDICTED: probable glycosyltransferase 0.884 0.937 0.493 1e-166
255546377676 catalytic, putative [Ricinus communis] g 0.979 0.937 0.458 1e-165
225429942675 PREDICTED: probable glycosyltransferase 0.978 0.937 0.472 1e-165
449461995664 PREDICTED: probable glycosyltransferase 0.619 0.603 0.654 1e-163
356518344637 PREDICTED: probable glycosyltransferase 0.925 0.940 0.478 1e-162
358348291550 hypothetical protein MTR_121s0013 [Medic 0.667 0.785 0.636 1e-161
356511373643 PREDICTED: probable glycosyltransferase 0.930 0.936 0.459 1e-160
>gi|359484345|ref|XP_002280595.2| PREDICTED: probable glycosyltransferase At5g03795-like [Vitis vinifera] gi|297738776|emb|CBI28021.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/674 (57%), Positives = 471/674 (69%), Gaps = 36/674 (5%)

Query: 1   MDIIAKFHGSCRAEIRRLLVITGMVVAVMVVFQSFSLV---------TNKGSIVMMV--- 48
           MD+ A F   C  E RRLL I G+VVA ++VFQ F L          T KGS+ MMV   
Sbjct: 1   MDMTALFMKLCHVESRRLLFIVGLVVASVIVFQVFELPSMNTLTLSPTVKGSVSMMVGDA 60

Query: 49  -VGNSNTSVVNMSTSTKLDVAVASDEERLEPDMDRGLMVGVENYPNHSFYKLKGENSFN- 106
            +  ++ S  +    T ++ + ASD E  E DMD  L    +   ++S    K +NS N 
Sbjct: 61  TILKNSISANSYVIRTVVNNSDASDLED-EADMDYHLASDDDGDLDYSVEMHKEKNSDNE 119

Query: 107 ----KGVTDDKSLNMGYATSLDNSSTETEAMEIEHGKLEKVEKVGSTYNFDDDPKATAGL 162
               KGV  DKS+ +      DNS  E +A+E  HG LE ++   + +  DDD KA+  L
Sbjct: 120 FILEKGVGLDKSMTVRNVRHTDNSPKE-KAIEFRHGPLEHLKISDNNFKIDDDRKASTSL 178

Query: 163 ELGGVQNR--------ASPGDFTAEVEKLDVNSTASESISAANLSSTADVRQTTETQPMN 214
            +G   NR         SPG  +     LD +S  S+      LS+ ++V+   E +  +
Sbjct: 179 TIGEGSNRDGLVSLPLVSPGISSKGTRNLDADSRTSD------LSTVSNVKHVMEAEK-D 231

Query: 215 PKVSKQPPASIP-TNNLSAADISILKRWNRRPTSISKMDLLLLQSRVSSRSMRPSSSSVR 273
              +     S+P  NN + ADISI +R   +PT+ISKM+LLLLQS VSS SMRP  SS R
Sbjct: 232 KNTNLLQTVSVPLDNNYTIADISITRRRGMKPTTISKMNLLLLQSAVSSYSMRPRWSSPR 291

Query: 274 DRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQ 333
           DRELLSA+ EI+NAPV  NTP L+ASV+RNVS+FKRSYELME +LK+YIY+EGEKPIFHQ
Sbjct: 292 DRELLSARSEIQNAPVIRNTPGLYASVYRNVSMFKRSYELMERVLKIYIYREGEKPIFHQ 351

Query: 334 PIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQN 393
           P +RGIYASEGWFMKL+EGN++FVVRDPRKAHLFY+PFSS+MLR    EQ     +DL+ 
Sbjct: 352 PRLRGIYASEGWFMKLIEGNKRFVVRDPRKAHLFYVPFSSKMLRTVFYEQNSSTPRDLEK 411

Query: 394 YLKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIG 453
           Y K YV  I+ KYRFWNRTGG DH +VACHDWAP+ T Q   N I+ALCN++++ GFKIG
Sbjct: 412 YFKNYVGLIAGKYRFWNRTGGADHLIVACHDWAPRITRQCSWNSIRALCNSNIASGFKIG 471

Query: 454 MDTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRMHGYLRPILLNFWENKVDDMKIF 513
            DT+LPVTYIR +E PL  LGG PP +R  LAFFAG MHGYLRPILL +WENK  D+KIF
Sbjct: 472 KDTTLPVTYIRKSEDPLKYLGGKPPSQRPILAFFAGSMHGYLRPILLQYWENKEQDIKIF 531

Query: 514 GPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEV 573
           GPM  D  GK  YR+HMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFE+
Sbjct: 532 GPMSRDDGGKSRYRDHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEI 591

Query: 574 LNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVL 633
           LNWEAF+VF+ EKD+PNLRNILLSIPEE+YL MQ RVKMVQ+HFLWHKKP KYD+FHM+L
Sbjct: 592 LNWEAFAVFILEKDVPNLRNILLSIPEEKYLQMQMRVKMVQQHFLWHKKPVKYDLFHMIL 651

Query: 634 HSIWYNRLFNTRTK 647
           HS+WYNR+F  + K
Sbjct: 652 HSVWYNRVFQVKPK 665

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147799433|emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484343|ref|XP_002283936.2| PREDICTED: uncharacterized protein LOC100268163 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495238|ref|XP_003516486.1| PREDICTED: probable glycosyltransferase At3g07620-like [Glycine max] Back     alignment and taxonomy information
>gi|255546377|ref|XP_002514248.1| catalytic, putative [Ricinus communis] gi|223546704|gb|EEF48202.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225429942|ref|XP_002281263.1| PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461995|ref|XP_004148727.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] gi|449501299|ref|XP_004161331.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356518344|ref|XP_003527839.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] Back     alignment and taxonomy information
>gi|358348291|ref|XP_003638181.1| hypothetical protein MTR_121s0013 [Medicago truncatula] gi|355504116|gb|AES85319.1| hypothetical protein MTR_121s0013 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356511373|ref|XP_003524401.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query647
TAIR|locus:2145254654 AT5G25820 "AT5G25820" [Arabido 0.565 0.559 0.643 2.7e-139
TAIR|locus:2125687593 AT4G32790 "AT4G32790" [Arabido 0.794 0.866 0.496 1.2e-131
TAIR|locus:2152632547 AT5G37000 "AT5G37000" [Arabido 0.749 0.886 0.507 3.6e-128
TAIR|locus:2144231546 AT5G11610 "AT5G11610" [Arabido 0.561 0.664 0.569 4.4e-116
TAIR|locus:2091122470 AT3G07620 "AT3G07620" [Arabido 0.523 0.721 0.445 1e-82
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.517 0.646 0.455 9.4e-82
TAIR|locus:2145472480 AT5G25310 "AT5G25310" [Arabido 0.550 0.741 0.402 9.9e-71
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.675 0.874 0.341 5.1e-67
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.525 0.723 0.388 1.1e-66
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.513 0.781 0.350 1.4e-57
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1320 (469.7 bits), Expect = 2.7e-139, Sum P(3) = 2.7e-139
 Identities = 238/370 (64%), Positives = 292/370 (78%)

Query:   276 ELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQPI 335
             ELL AK +IENAP+    P L+A ++RNVS+FKRSYELME +LKVY YKEG KPI H PI
Sbjct:   282 ELLQAKYDIENAPIDDKDPFLYAPLYRNVSMFKRSYELMEKILKVYAYKEGNKPIMHSPI 341

Query:   336 MRGIYASEGWFMKLMEGNR-KFVVRDPRKAHLFYLPFSSQMLRIALSEQKLQNHQDLQNY 394
             +RGIYASEGWFM ++E N  KFV +DP KAHLFYLPFSS+ML + L  Q   +H++L  Y
Sbjct:   342 LRGIYASEGWFMNIIESNNNKFVTKDPAKAHLFYLPFSSRMLEVTLYVQDSHSHRNLIKY 401

Query:   395 LKTYVKTISRKYRFWNRTGGTDHFVVACHDWAPKFTGQHLRNCIKALCNADVSKGFKIGM 454
             LK Y+  IS KY FWNRT G DHF+ ACHDWAP  T +H+   I+ALCN+DV +GF  G 
Sbjct:   402 LKDYIDFISAKYPFWNRTSGADHFLAACHDWAPSETRKHMAKSIRALCNSDVKEGFVFGK 461

Query:   455 DTSLPVTYIRSAEAPLDNLGGNPPLKRSTLAFFAGRM-HGYLRPILLNFWENKVD-DMKI 512
             DTSLP T++R  + PL N+GG    +R  LAFFAG+  HGYLRPILL++W N  D D+KI
Sbjct:   462 DTSLPETFVRDPKKPLSNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKI 521

Query:   513 FGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFE 572
             FG +P   +G + Y + MK+SKYCICA+G+EV++PRVVEAIFY+CVPVIISDN+VPPFFE
Sbjct:   522 FGKLPR-TKGNKNYLQFMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFE 580

Query:   573 VLNWEAFSVFVQEKDIPNLRNILLSIPEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMV 632
             VLNWE+F++F+ EKDIPNL+ IL+SIPE RY +MQ RVK VQKHFLWH KP+KYD+FHM+
Sbjct:   581 VLNWESFAIFIPEKDIPNLKKILMSIPESRYRSMQMRVKKVQKHFLWHAKPEKYDMFHMI 640

Query:   633 LHSIWYNRLF 642
             LHSIWYNR+F
Sbjct:   641 LHSIWYNRVF 650
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016687001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (665 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query647
pfam03016292 pfam03016, Exostosin, Exostosin family 1e-61
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  206 bits (526), Expect = 1e-61
 Identities = 84/305 (27%), Positives = 129/305 (42%), Gaps = 33/305 (10%)

Query: 314 MESLLKVYIY-------KEGEKPIFHQPIMRGIYASEGWFMKLMEGNRKFVVRDPRKAHL 366
               LKVY+Y          +        +   YA+E    K +  N +    DP +A L
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSIL-NSRCRTLDPDEADL 59

Query: 367 FYLPFSSQMLRIALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDW- 425
           F++PF + +            +   ++ L + +        +WNR+GG DH +V  H + 
Sbjct: 60  FFVPFYTSLSV--------GTNAVERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPFG 111

Query: 426 --APKFTGQHLRNCIKALCNAD--VSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPLKR 481
             A         N I A+          F+ G D  LP  +  +         G PP KR
Sbjct: 112 GSAFDRLPALNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPN-SVDDLESDGMPPSKR 170

Query: 482 STLAFFAGRMH--------GYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSS 533
            TL FFAG             +R +L+   +N   D +  G           Y E ++SS
Sbjct: 171 KTLLFFAGGPRPAGKGALANAIRDLLIEECKN-SPDFQCEGNQSCG--NPENYMELLRSS 227

Query: 534 KYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRN 593
           ++C+   G    +PR+ +A+   C+PVIISD +  PF +V++W  FSV V E DIP+L  
Sbjct: 228 RFCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSVRVPENDIPSLPE 287

Query: 594 ILLSI 598
           IL +I
Sbjct: 288 ILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 647
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 100.0
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.91
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 97.2
cd03801374 GT1_YqgM_like This family is most closely related 97.18
cd03814364 GT1_like_2 This family is most closely related to 97.08
cd03794394 GT1_wbuB_like This family is most closely related 96.81
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 96.8
cd03821375 GT1_Bme6_like This family is most closely related 96.79
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 96.67
cd03822366 GT1_ecORF704_like This family is most closely rela 96.6
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 96.56
cd03820348 GT1_amsD_like This family is most closely related 96.43
cd03818396 GT1_ExpC_like This family is most closely related 96.35
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 96.34
cd03809365 GT1_mtfB_like This family is most closely related 96.32
cd04962371 GT1_like_5 This family is most closely related to 96.31
cd03819355 GT1_WavL_like This family is most closely related 96.31
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 96.07
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 95.98
cd03798377 GT1_wlbH_like This family is most closely related 95.84
cd04951360 GT1_WbdM_like This family is most closely related 95.79
cd03804351 GT1_wbaZ_like This family is most closely related 95.78
cd03800398 GT1_Sucrose_synthase This family is most closely r 95.65
cd03808359 GT1_cap1E_like This family is most closely related 95.58
cd03823359 GT1_ExpE7_like This family is most closely related 95.58
PRK10307412 putative glycosyl transferase; Provisional 95.37
cd03807365 GT1_WbnK_like This family is most closely related 95.35
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 94.96
cd03802335 GT1_AviGT4_like This family is most closely relate 94.92
cd03806419 GT1_ALG11_like This family is most closely related 94.85
cd03805392 GT1_ALG2_like This family is most closely related 94.73
cd03825365 GT1_wcfI_like This family is most closely related 94.69
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 94.57
PRK14098489 glycogen synthase; Provisional 94.5
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 94.47
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 94.44
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 94.42
cd04955363 GT1_like_6 This family is most closely related to 94.35
PRK00654466 glgA glycogen synthase; Provisional 94.01
cd03817374 GT1_UGDG_like This family is most closely related 93.89
cd03796398 GT1_PIG-A_like This family is most closely related 93.69
cd03816415 GT1_ALG1_like This family is most closely related 93.58
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 93.46
cd03811353 GT1_WabH_like This family is most closely related 93.21
PRK14099485 glycogen synthase; Provisional 93.19
cd03795357 GT1_like_4 This family is most closely related to 92.97
cd04949372 GT1_gtfA_like This family is most closely related 92.96
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 92.91
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 92.74
cd04946407 GT1_AmsK_like This family is most closely related 92.55
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 91.92
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 91.85
PLN02949463 transferase, transferring glycosyl groups 91.37
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 91.25
cd03812358 GT1_CapH_like This family is most closely related 90.66
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 90.6
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 89.85
PHA01633335 putative glycosyl transferase group 1 89.75
cd03813475 GT1_like_3 This family is most closely related to 89.72
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 89.45
PHA01630331 putative group 1 glycosyl transferase 87.59
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 87.45
PLN02939977 transferase, transferring glycosyl groups 84.91
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 80.82
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-65  Score=560.88  Aligned_cols=366  Identities=40%  Similarity=0.630  Sum_probs=315.5

Q ss_pred             CCCCCCchhhHHHHhhhhhhccCCCCCCCCCccccccCCCccccchhhhhcCCCcEEEecCCCCCCcCCc--ccCcchhh
Q 006399          265 MRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELMESLLKVYIYKEGEKPIFHQP--IMRGIYAS  342 (647)
Q Consensus       265 ~~~~w~~~~d~~l~~a~~~i~~a~~~~~~~~~~~~~y~~~scF~~SY~cm~~~fKVYVYp~~~~pi~h~~--~~~~iYas  342 (647)
                      -...++...+.+|+.....+.              .|++...|..+|..|+..+|||+|.+++.+.+|.+  +.+++|++
T Consensus        76 ~~~~~~~~F~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  141 (464)
T KOG1021|consen   76 YVYNLPSGFDVSLLLFHKQIP--------------TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYAS  141 (464)
T ss_pred             eeeccchhhhhhhhccCcccc--------------ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhH
Confidence            455667777888877665544              67788888899999999999999999988888877  89999999


Q ss_pred             HHHHHHHHh-hCCccccCCCCCceEEEEeccchhhH-HhhhhhhhhhhHHHHHHHHHHHHHHhhcCcccccCCCccEEEE
Q 006399          343 EGWFMKLME-GNRKFVVRDPRKAHLFYLPFSSQMLR-IALSEQKLQNHQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVV  420 (647)
Q Consensus       343 E~~F~~~Le-~sS~~rT~DPeEA~LFyVPfs~~~l~-~~ly~~~~~~~~~L~~~l~~yv~~I~~~yPyWNRsgGrDHflv  420 (647)
                      |++||+.|+ ..++|||.||++||+||||||+.+.. .+++.++......+...+.+|+..+++++|||||++|+|||++
T Consensus       142 E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v  221 (464)
T KOG1021|consen  142 EGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFV  221 (464)
T ss_pred             HHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEE
Confidence            999999996 34799999999999999999998875 5555554333345567778888888899999999999999999


Q ss_pred             eecCCCccch---hHhhhhHhhheec-ccCCCCcccC-cceeCcccccCCCCCcC--CCCCCCCCCCCceEEEEeec-cC
Q 006399          421 ACHDWAPKFT---GQHLRNCIKALCN-ADVSKGFKIG-MDTSLPVTYIRSAEAPL--DNLGGNPPLKRSTLAFFAGR-MH  492 (647)
Q Consensus       421 ~~hdwgp~~t---~~~~~n~IraL~n-as~~~~FRpg-~DVsIP~~~~~~~~~pl--~~l~~~~p~~R~~LafFaG~-~~  492 (647)
                      +||+|++...   .....+.|+.+|+ ++.+.+|.+. +||+||++....+..+.  .++...+..+|++|+||+|+ .+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~  301 (464)
T KOG1021|consen  222 ACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAG  301 (464)
T ss_pred             eCCcchheeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccC
Confidence            9999998765   3456677888888 7788999999 99999997554443333  34566667899999999999 89


Q ss_pred             CcchHHHHHHhhcCCCCeEEecCCCCCC---cchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEEecCCccCC
Q 006399          493 GYLRPILLNFWENKVDDMKIFGPMPHDV---EGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPP  569 (647)
Q Consensus       493 G~iR~~L~~~w~n~~~dv~I~~~c~~~~---~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVIIsD~~~LP  569 (647)
                      |.+|+.|+++|++ +++......|+.+.   .+...|.+.|++|+|||||+|++++|+|+||||.+|||||||+|++.+|
T Consensus       302 ~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lp  380 (464)
T KOG1021|consen  302 GQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLP  380 (464)
T ss_pred             CcHHHHHHHHhhc-CcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccC
Confidence            9999999999987 66666667777653   2368899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEEcCCChhhH-HHHHcCCCHHHHHHHHHHHH-hhhheeEecc--CCCCccHHHHHHHHHHHhhhcccc
Q 006399          570 FFEVLNWEAFSVFVQEKDIPNL-RNILLSIPEERYLAMQSRVK-MVQKHFLWHK--KPKKYDIFHMVLHSIWYNRLFNTR  645 (647)
Q Consensus       570 FsdVLDWs~fSV~Ipe~dI~~L-~~iL~sIs~e~i~~Mr~~l~-~vq~~Flw~~--~p~~~DaFhmiL~slwlRRl~~~~  645 (647)
                      |++++||++|||+|++++++++ +++|.+|+.+++.+||++++ .+++||+|+.  +++.+|||||+++++|+|++.+.+
T Consensus       381 f~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~~  460 (464)
T KOG1021|consen  381 FGDVLDWTEFSVFVPEKDVPELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLRS  460 (464)
T ss_pred             cCCCccceEEEEEEEHHHhhhHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccccc
Confidence            9999999999999999999998 99999999999999999999 4999999998  788899999999999999987653

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query647
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 64.9 bits (157), Expect = 6e-11
 Identities = 66/408 (16%), Positives = 129/408 (31%), Gaps = 97/408 (23%)

Query: 256 LQSRVSSRSMRPSSSSVRDRELLSAKVEIENAPVSWNTPELHASVFRNVSIFKRSYELME 315
           L S + +   +PS        +   + +       +N  ++ A    NVS  +   +L +
Sbjct: 94  LMSPIKTEQRQPS----MMTRMYIEQRD-----RLYNDNQVFAK--YNVSRLQPYLKLRQ 142

Query: 316 SLLKV----YIYKEGEKPIFHQPIMRGIYASEGWFMK--L-MEGNRKFVVRDPRKAHLFY 368
           +LL++     +  +G         + G     G   K  + ++    + V+      +F+
Sbjct: 143 ALLELRPAKNVLIDG---------VLGS----G---KTWVALDVCLSYKVQCKMDFKIFW 186

Query: 369 LPFSSQMLRIALSEQKLQN--HQDLQNYLKTYVKTISRKYRFWNRTGGTDHFVVACHDWA 426
           L   +      + E  LQ   +Q   N+      + + K R               H   
Sbjct: 187 LNLKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIKLRI--------------HSIQ 231

Query: 427 PK----FTGQHLRNCIKAL---CNADVSKGFKIGMDTSLPVTYIRSAEAPLDNLGGNPPL 479
            +       +   NC+  L    NA     F +     L  T  R  +   D L      
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI-LLTT--RFKQV-TDFLSAATTT 287

Query: 480 KRSTLAFFAGRMHGYLRPILLNFWENKVDD----MKIFGPMPHDVEGKRIYREHMKSSKY 535
             S            ++ +LL + + +  D    +    P    +  + I R+ + +   
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI-RDGLATWDN 346

Query: 536 CICARGYE-VHTPRVVEAI--FYECV-PVIISDNYVPPFFEVLNWEAFSVFVQEKDIPNL 591
                 ++ V+  ++   I      + P      +          +  SVF     IP  
Sbjct: 347 ------WKHVNCDKLTTIIESSLNVLEPAEYRKMF----------DRLSVFPPSAHIP-- 388

Query: 592 RNILLSI---PEERYLAMQSRVKMVQKHFLWHKKPKKYDIFHMVLHSI 636
             ILLS+      +   M    K+ +   L  K+PK+  I    + SI
Sbjct: 389 -TILLSLIWFDVIKSDVMVVVNKLHKY-SLVEKQPKESTIS---IPSI 431
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query647
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.93
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 97.15
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 96.94
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 96.8
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 96.68
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 96.24
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 95.81
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 95.63
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 95.37
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 95.3
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 95.28
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 95.17
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 94.94
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 94.75
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 94.74
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 94.61
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 94.36
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 93.57
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 93.3
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 93.29
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 91.34
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 90.77
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 88.63
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 87.92
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 81.94
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.93  E-value=4.6e-05  Score=69.36  Aligned_cols=130  Identities=14%  Similarity=0.075  Sum_probs=85.1

Q ss_pred             ceEEEEeeccCCcchHHHHHHhhcCCCCeEEecCCCCCCcchhhHHHhhccceEEEEecCCCCCCchHHHHhhcCcEEEE
Q 006399          482 STLAFFAGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEGKRIYREHMKSSKYCICARGYEVHTPRVVEAIFYECVPVI  561 (647)
Q Consensus       482 ~~LafFaG~~~G~iR~~L~~~w~n~~~dv~I~~~c~~~~~g~~~Y~e~m~~SkFCL~P~G~~~~S~Rl~EAL~aGCIPVI  561 (647)
                      .+-+.+.|.  |..+..+.+..+.....+.+ +..+     ..+..+.|..+..+++|.-.+.....++|||.+||||||
T Consensus        32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~~-----~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi  103 (166)
T 3qhp_A           32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFVN-----SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVI  103 (166)
T ss_dssp             GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCCC-----HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEE
T ss_pred             CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eecC-----HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEE
Confidence            455666774  44445444443322224445 5543     357889999999999998777778899999999999999


Q ss_pred             ecCCccCCCCCCCCCCceEEEEcCCChhhHHHHHcCC--CHHHHHHHHHHHHhhhheeEeccC
Q 006399          562 ISDNYVPPFFEVLNWEAFSVFVQEKDIPNLRNILLSI--PEERYLAMQSRVKMVQKHFLWHKK  622 (647)
Q Consensus       562 IsD~~~LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sI--s~e~i~~Mr~~l~~vq~~Flw~~~  622 (647)
                      ..+.. -...+++.-...  .++..+...+.+.|..+  .++.+.+|.++.++..++|-|+.-
T Consensus       104 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~  163 (166)
T 3qhp_A          104 ANSPL-SATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENS  163 (166)
T ss_dssp             ECCTT-CGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC----
T ss_pred             eeCCC-CchhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhhh
Confidence            94432 112344443444  66777777666555544  678888999988877788888753
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query647
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.57
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 95.87
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 94.81
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 94.7
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 93.77
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 91.36
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.57  E-value=0.0034  Score=64.37  Aligned_cols=123  Identities=15%  Similarity=0.243  Sum_probs=81.5

Q ss_pred             CCCceEEEE-eeccCCcchHHHHHHhhcCCCCeEEecCCCCCCcc-hhhHHHhhccceEEEEecC---CCCCCchHHHHh
Q 006399          479 LKRSTLAFF-AGRMHGYLRPILLNFWENKVDDMKIFGPMPHDVEG-KRIYREHMKSSKYCICARG---YEVHTPRVVEAI  553 (647)
Q Consensus       479 ~~R~~LafF-aG~~~G~iR~~L~~~w~n~~~dv~I~~~c~~~~~g-~~~Y~e~m~~SkFCL~P~G---~~~~S~Rl~EAL  553 (647)
                      ..|+.++.| ++...+..|..+.+.+.+ -..|..+|.|.+...+ ..+-.+.|++.+|+||.--   .+..+-.++||+
T Consensus       177 ~~K~kFcs~v~Sn~~~~~R~~~~~~L~k-~~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~  255 (349)
T d2nzwa1         177 PLKRGFASFVASNPNAPIRNAFYDALNS-IEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAY  255 (349)
T ss_dssp             TTSSEEEEECCSCCCCHHHHHHHHHHTT-TSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHH
T ss_pred             cccCceEEEEEcCCCCchHHHHHHHHhc-cCeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHH
Confidence            456666655 455445678888777743 3467778888553222 3355788999999999742   234589999999


Q ss_pred             hcCcEEEEecCC-cc--CCCCCCCCCCceEEEEcCCChhhHHHHHcCCC--HHHHHHHHH
Q 006399          554 FYECVPVIISDN-YV--PPFFEVLNWEAFSVFVQEKDIPNLRNILLSIP--EERYLAMQS  608 (647)
Q Consensus       554 ~aGCIPVIIsD~-~~--LPFsdVLDWs~fSV~Ipe~dI~~L~~iL~sIs--~e~i~~Mr~  608 (647)
                      .+|||||..++. +.  +|=...|+...|      ..+.++.+.|..++  ++.+.+|-.
T Consensus       256 ~~g~iPIy~G~~~i~~~f~~~sfI~~~df------~s~~el~~~i~~l~~n~~~Y~~~~~  309 (349)
T d2nzwa1         256 FSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDMLY  309 (349)
T ss_dssp             HTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             hCCeEEEEECCCcHHHcCCCccEEEhhhC------CCHHHHHHHHHHHhcCHHHHHHHHh
Confidence            999999999964 32  332223333333      45677888888774  667777755
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure