Citrus Sinensis ID: 006505

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---
MNKQGGCEIEAIGINYNVYTQKKETPFKIFTKNQLNDDHHAQEELSKLEEAADSDGVRRVLDGVSCKAKPWEILAIVGPSGAGKSSLLEILAGKLTPQSGSTFVNGSPIDKAQFRKVSGYVTQRDTLFPLLTVEETLMFSAKLRLRLPQAQLRARVKSLVKELGLEHVAMARVGDDRVRGISGGERRRVSIGFDVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTVILSIHQPGFRIVKMFNSILMLANGSVLHHGTVDLLSVSLRMMGLQLPMHVNVVEFAIESIDLIQEQRKIQQENQPRMMLPATQQQKKAEEGESRSGKFTLQQLFQQSKVIDEEIMNVGIEIPRDFANSRFKETIILTHRFSKNIFRTKELFACRTIQMLISGIVLGSIFHNVKDDLTGTEEKVGLFAFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSVPLYWIVGLNPNLMAFFHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQRSFRRALV
cccccccCEEEEEEEEEEECccccccccccccccccccccccccHHHHHcccccccccccccccCEEECccEEEEEEccccccHHHHHHHHccccccccCEEEEcccccccccccccEEEEEccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHEEccccEEEEcccccHHHHHHHccccccccccHHHHHHHHHcccHHHHHHHHccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHcccccHHHHHHHHHHHccccccccccccccEECcHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcc
*****GCEIEAIGINYNVYTQKKETPFKIFTKNQLNDDHHAQE*************VRRVLDGVSCKAKPWEILAIVGPSGAGKSSLLEILAGKLTPQSGSTFVNGSPIDKAQFRKVSGYVTQRDTLFPLLTVEETLMFSAKLRLRLPQAQLRARVKSLVKELGLEHVAMARVGDDRVRGISGGERRRVSIGFDVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTVILSIHQPGFRIVKMFNSILMLANGSVLHHGTVDLLSVSLRMMGLQLPMHVNVVEFAIESIDLIQE***************ATQ****************LQQLFQQSKVIDEEIMNVGIEIPRDFANSRFKETIILTHRFSKNIFRTKELFACRTIQMLISGIVLGSIFHNVKDDLTGTEEKVGLFAFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSVPLYWIVGLNPNLMAFFHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQRSFRRALV
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxx
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MNKQGGCEIEAIGINYNVYTQKKETPFKIFTKNQLNDDHHAQEELSKLEEAADSDGVRRVLDGVSCKAKPWEILAIVGPSGAGKSSLLEILAGKLTPQSGSTFVNGSPIDKAQFRKVSGYVTQRDTLFPLLTVEETLMFSAKLRLRLPQAQLRARVKSLVKELGLEHVAMARVGDDRVRGISGGERRRVSIGFDVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTVILSIHQPGFRIVKMFNSILMLANGSVLHHGTVDLLSVSLRMMGLQLPMHVNVVEFAIESIDLIQEQRKIQQENQPRMMLPATQQQKKAEEGESRSGKFTLQQLFQQSKVIDEEIMNVGIEIPRDFANSRFKETIILTHRFSKNIFRTKELFACRTIQMLISGIVLGSIFHNVKDDLTGTEEKVGLFAFILTFLLSCTTEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSVPLYWIVGLNPNLMAFFHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPDYWIFMHYISLFKYPFEQFLINEFSDSDKCLQYIFGKCVVKGEDVLREAGYEEESSWRNLVIMVGFILIYRFISYVILRFRCSQRSFRRALV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ABC transporter G family member 5 confidentQ9SIT6
ATP-binding cassette sub-family G member 2 Xenobiotic transporter that may play an important role in the exclusion of xenobiotics from the brain. May be involved in brain-to-blood efflux.probableQ4GZT4
ATP-binding cassette sub-family G member 2 Xenobiotic transporter that may play an important role in the exclusion of xenobiotics from the brain. May be involved in brain-to-blood efflux (By similarity). May play a role in early stem cell self-renewal by blocking differentiation.probableQ7TMS5

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GFO, chain A
Confidence level:confident
Coverage over the Query: 58-282
View the alignment between query and template
View the model in PyMOL
Template: 2BBS, chain A
Confidence level:confident
Coverage over the Query: 58-265
View the alignment between query and template
View the model in PyMOL
Template: 3BK7, chain A
Confidence level:confident
Coverage over the Query: 7-118,129-235
View the alignment between query and template
View the model in PyMOL
Template: 3GD7, chain A
Confidence level:probable
Coverage over the Query: 60-327
View the alignment between query and template
View the model in PyMOL