Citrus Sinensis ID: 006523
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 642 | 2.2.26 [Sep-21-2011] | |||||||
| P80065 | 661 | Beta-fructofuranosidase, | N/A | no | 0.995 | 0.966 | 0.626 | 0.0 | |
| P29000 | 636 | Acid beta-fructofuranosid | N/A | no | 0.947 | 0.955 | 0.644 | 0.0 | |
| P93761 | 640 | Acid beta-fructofuranosid | N/A | no | 0.951 | 0.954 | 0.655 | 0.0 | |
| P29001 | 649 | Acid beta-fructofuranosid | N/A | no | 0.970 | 0.959 | 0.604 | 0.0 | |
| Q39041 | 664 | Acid beta-fructofuranosid | yes | no | 0.951 | 0.920 | 0.600 | 0.0 | |
| Q43857 | 642 | Acid beta-fructofuranosid | N/A | no | 0.878 | 0.878 | 0.650 | 0.0 | |
| Q43348 | 648 | Acid beta-fructofuranosid | no | no | 0.940 | 0.932 | 0.593 | 0.0 | |
| O24509 | 651 | Acid beta-fructofuranosid | N/A | no | 0.894 | 0.881 | 0.634 | 0.0 | |
| P49175 | 670 | Beta-fructofuranosidase 1 | N/A | no | 0.862 | 0.826 | 0.641 | 0.0 | |
| Q5FC15 | 610 | 6(G)-fructosyltransferase | N/A | no | 0.838 | 0.881 | 0.544 | 1e-171 |
| >sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/664 (62%), Positives = 502/664 (75%), Gaps = 25/664 (3%)
Query: 1 MDTPYHHL------HAPPYYP-PLLPEEQPS-DAGTPASHRKPFKGFAAILASAIFLLSL 52
MDT YH L HA Y P P PE + D ++R+P K +++L S + L +
Sbjct: 1 MDT-YHFLPSRDLEHASSYTPRPDSPETRHEPDPDRSKTNRRPIKIVSSVLLSTLILSFV 59
Query: 53 VALIIN----QTQKPLPSQN----NIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIK 104
+ L++N Q + S+N + SK P RGV++GVS KS +
Sbjct: 60 IFLLVNPNVQQVVRKKVSKNSNGEDRNKASKSPEMLGPPSRGVSQGVSEKSFRQA--TAE 117
Query: 105 GSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA 164
SY WTN M +WQRTSFHFQP++NWMNDPNGPLF+ GWYHLFYQYNPDSA+WGNITWGHA
Sbjct: 118 PSYPWTNDMLSWQRTSFHFQPQENWMNDPNGPLFHMGWYHLFYQYNPDSAIWGNITWGHA 177
Query: 165 VSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA 224
+S DLI+WL+LP AM PDQWYDINGVWTGSAT+LPDG+IVMLYTG TD VQVQNLAYPA
Sbjct: 178 ISRDLINWLHLPFAMQPDQWYDINGVWTGSATVLPDGKIVMLYTGDTDDLVQVQNLAYPA 237
Query: 225 DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
+ SDPLLLDW+KYP NPV+ PP IG DFRDPTTAW G DGKWR+TIGSK+ KTGISL+
Sbjct: 238 NLSDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLM 297
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y+TTDF TYELLD LHAVPGTGMWECVDFYPV++ GS GLDTS GPG+KHVLK+SLDD
Sbjct: 298 YKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDD 357
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
+ D+YA+GTY+P NDKWTPDNPE DVGIGL+ DYG+YYASK+FYD K+RR++WGWI E
Sbjct: 358 DRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGE 417
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSV 464
TD+ES DL KGWASVQ+IPRTV++D KTG+N++QWPV+E+ESLR S ++V ++PGS+
Sbjct: 418 TDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSL 477
Query: 465 VPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDS 519
VPL I A QLDI A FE + G+ + Y C S GA R +GPFG+LV A D
Sbjct: 478 VPLKISSAAQLDIVASFEVDEEAFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDP 537
Query: 520 LSELTPIFFRSSNTTKG-TNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVD 578
LSELTP++F + G TYFCAD++RSS A DV K+V+GS VPVL GE LSMR+LVD
Sbjct: 538 LSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLHGESLSMRLLVD 597
Query: 579 HSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFP 638
HSIVESF QGGRTVITSR+YPT+AIY AAR+FLFNNATGV+V A++K W++ SA + PFP
Sbjct: 598 HSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMASATLKPFP 657
Query: 639 LDQI 642
DQ+
Sbjct: 658 FDQL 661
|
May participate in the regulation of the hexose level in mature tissues and in the utilization of sucrose stored in vacuoles. Daucus carota (taxid: 4039) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|P29000|INVA_SOLLC Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/638 (64%), Positives = 488/638 (76%), Gaps = 30/638 (4%)
Query: 17 LLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKP 76
LLP+ QP D+G HRK K + I S LLS+ I Q P ++ P
Sbjct: 17 LLPD-QP-DSG----HRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPA--- 67
Query: 77 TSFSNPEPRGVAEGVSAKSNSHLLRNIKG----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
P RGV++GVS K+ R++ G SY W+NAM +WQRT++HFQP+KNWMND
Sbjct: 68 -----PPSRGVSQGVSDKT----FRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMND 118
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPL++KGWYHLFYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWT
Sbjct: 119 PNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWT 178
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSATILPDGQI+MLYTG TD VQVQNLAYPA+ SDPLLLDWVK+ GNPVLVPP IG K
Sbjct: 179 GSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVK 238
Query: 253 DFRDPTTAWAGP-DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
DFRDPTTAW GP +G+W LTIGSKIGKTG++LVY+T++F +++LLD LHAVPGTGMWEC
Sbjct: 239 DFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWEC 298
Query: 312 VDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
VDFYPV+ + GLDTS GPG+KHVLKASLDD K DHYAIGTY+ +KWTPDNPE D
Sbjct: 299 VDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDC 358
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL+ DYG+YYASK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVLYD K
Sbjct: 359 GIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKK 418
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAM 491
TG++++QWPVEEIESLR ++V ++PGS+ L + A +LDI A FE + + +
Sbjct: 419 TGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGI 478
Query: 492 EE----GYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG-TNTYFCAD 544
E G+ C SGGA R +GPFG++V A +LSELTP++F S G T+FCAD
Sbjct: 479 IEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCAD 538
Query: 545 ETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIY 604
+TRSS AP V KQV+GS VPVL GEK SMR+LVDHSIVESF QGGRTVITSRIYPTKA+
Sbjct: 539 QTRSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVN 598
Query: 605 GAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
GAARLF+FNNATG +V A++KIW L SA I FPL +
Sbjct: 599 GAARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL 636
|
Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P93761|INV1_CAPAN Acid beta-fructofuranosidase AIV-18 OS=Capsicum annuum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/624 (65%), Positives = 478/624 (76%), Gaps = 13/624 (2%)
Query: 27 GTPAS-HRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPR 85
G P S HRK K + IL S+ FLL L A +I Q P + N P++ T R
Sbjct: 22 GQPDSGHRKSIKVVSVILLSSFFLLYLAAFVILNNQPP--NLQNKSPSASETLTPATPSR 79
Query: 86 GVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHL 145
GV++GVS K+ + + SY W+NAM WQRT++HFQP+KNWMNDPNGPL++KGWYHL
Sbjct: 80 GVSQGVSEKTFKDVSGTSQVSYTWSNAMLNWQRTAYHFQPQKNWMNDPNGPLYHKGWYHL 139
Query: 146 FYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205
FYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWTGSATILPDG I+M
Sbjct: 140 FYQYNPDSAIWGNITWGHAVSTDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGLIMM 199
Query: 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP- 264
LYTG TD VQVQNLAYPA+ SDPLLLDWVKY GNPVLVPP IG KDFRDPTTAW GP
Sbjct: 200 LYTGDTDDYVQVQNLAYPANLSDPLLLDWVKYQGNPVLVPPPGIGVKDFRDPTTAWTGPQ 259
Query: 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324
+G+W LTIGSK+GKTGI+LVY+T++FK LLD LHAVPGTGMWECVDFYPV+ + G
Sbjct: 260 NGQWLLTIGSKVGKTGIALVYETSNFK---LLDGVLHAVPGTGMWECVDFYPVSTLDANG 316
Query: 325 LDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYA 384
LDTS GPGIKHVLKASLDD K DHY IGTY+P +K++PDNP+ D GIGL+ DYGRYYA
Sbjct: 317 LDTSYNGPGIKHVLKASLDDNKQDHYVIGTYDPVKNKFSPDNPDLDCGIGLRLDYGRYYA 376
Query: 385 SKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEI 444
SK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVL+D KTG++++QWPV EI
Sbjct: 377 SKTFYDPKKQRRVLWGWIGETDSESADLQKGWASVQSIPRTVLFDKKTGTHLLQWPVAEI 436
Query: 445 ESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SG 499
ESLR +EV ++PGS+ L + A Q DI A FE + L G + GY C SG
Sbjct: 437 ESLRSGDPKVKEVNLQPGSIELLHVDSAAQFDIEASFEVDRVTLEGIIEADVGYNCSTSG 496
Query: 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG-TNTYFCADETRSSLAPDVFKQV 558
GA R +GPFG++V A +LSELTP++F S G +FCAD+TRSS AP V KQV
Sbjct: 497 GAASRGILGPFGVVVIADQTLSELTPVYFYISRGADGRAEAHFCADQTRSSEAPGVAKQV 556
Query: 559 HGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGV 618
+GS VPVL GEK MR+LVDHSIVESF QGGRTVITSRIYPTKA+ GAARLF+FNNATG
Sbjct: 557 YGSSVPVLDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGAARLFVFNNATGA 616
Query: 619 NVKATLKIWRLNSAFIHPFPLDQI 642
V A+LKIW L SA I FPL ++
Sbjct: 617 IVTASLKIWSLESADIRSFPLQKL 640
|
Capsicum annuum (taxid: 4072) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase OS=Vigna radiata var. radiata GN=INVA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/647 (60%), Positives = 476/647 (73%), Gaps = 24/647 (3%)
Query: 13 YYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI------INQTQKPLPS 66
++ PLLP S P S + K +L +FL SLVA + P+
Sbjct: 3 HHKPLLPT---SSHAAPTSSTR--KDLLFVLCGLLFLSSLVAYGGYRASGVPHAHLSSPT 57
Query: 67 ----QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRT 119
Q++ PTS P+S P RGV+ GVS KS++ L G+ + W N+M +WQRT
Sbjct: 58 SNHQQDHQSPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRT 117
Query: 120 SFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179
SFHFQPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AM
Sbjct: 118 SFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAM 177
Query: 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPG 239
V DQWYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLLLDW+K+ G
Sbjct: 178 VADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTG 237
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEY 299
NPVLVPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL +
Sbjct: 238 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGL 297
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
L AVPGTGMWECVDF+PV+ GLDTS G +KHV+K SLDD + D+YAIGTY+
Sbjct: 298 LRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNK 357
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
+TPD+ + DVG+GL++DYG +YASK+FYD K RRI+WGWI E+D+E D+ KGWASV
Sbjct: 358 VLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASV 417
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISA 479
Q+IPRTV D KTGSN++QWPV+E+ESLR S F+ + +PGSVV LDI ATQLD+ A
Sbjct: 418 QSIPRTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVA 477
Query: 480 EFETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTT 534
EFE + L + E + C SGGA R A+GPFGLLV A + LSE TP++F
Sbjct: 478 EFEIDTESLEKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGR 537
Query: 535 KGT-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVI 593
G T FC+D++RSS A DV KQ+ GS VPVL+GEK S+R+LVDHSIVESF QGGRT +
Sbjct: 538 NGNLRTSFCSDQSRSSQANDVRKQIFGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCV 597
Query: 594 TSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLD 640
TSR+YPTKAIYGAARLFLFNNAT V A+LK+W++NSAFI PFP +
Sbjct: 598 TSRVYPTKAIYGAARLFLFNNATEATVTASLKVWQMNSAFIRPFPFN 644
|
Possible role in the continued mobilization of sucrose to sink organs. Vigna radiata var. radiata (taxid: 3916) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39041|INVA4_ARATH Acid beta-fructofuranosidase 4, vacuolar OS=Arabidopsis thaliana GN=BFRUCT4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/639 (60%), Positives = 466/639 (72%), Gaps = 28/639 (4%)
Query: 18 LPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPT 77
LP P+ R+PFKG A+ +F+ VALI + I T T
Sbjct: 24 LPMADPNQETHGPRRRRPFKGLLAVSFGLLFIAFYVALIATH-DGSRSNDEGIDETETIT 82
Query: 78 SFSNPEPRGVAEGVSAKSNSHLLRNIKG-----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
S R GVS K N L + + G ++ W N+M +WQRT+FHFQPE+NWMND
Sbjct: 83 S------RARLAGVSEKRNDGLWK-LSGDRNTPAFEWNNSMLSWQRTAFHFQPEQNWMND 135
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPLFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHW++LPIAMV DQWYD NGVWT
Sbjct: 136 PNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVADQWYDSNGVWT 195
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSAT LPDG IVMLYTGSTDK+VQVQNLAYP DP+DPLLL WVK+PGNPVLVPP I PK
Sbjct: 196 GSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPVLVPPPGILPK 255
Query: 253 DFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECV 312
DFRDPTTAW +GKWR+TIGSK+ KTGISLVY T DFKTYE LD LH VP TGMWECV
Sbjct: 256 DFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHRVPNTGMWECV 315
Query: 313 DFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVG 372
DFYPV+ GLDTS GP +KH++KAS+DDT+ DHYA+GTY +N W PD+P DVG
Sbjct: 316 DFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVG 375
Query: 373 I--GLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDN 430
+ L++DYG++YASKSFYD K RR++W WI E+D+E+ D++KGW+S+Q IPRTV+ D
Sbjct: 376 MTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQGIPRTVVLDT 435
Query: 431 KTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFET------E 484
KTG N+VQWPVEEI+SLR +S F ++ V PGSVVP+D+G A QLDI AEFE +
Sbjct: 436 KTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQLDIEAEFEINKESLDK 494
Query: 485 LLGSG---AMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFR-SSNTTKGTN 538
++G+ A E + C SGG+ R A+GPFG V A +SLSE TP++F +
Sbjct: 495 IIGNASVVAEAEEFSCEKSGGSTVRGALGPFGFSVLATESLSEQTPVYFYVAKGKDSELK 554
Query: 539 TYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIY 598
T+FC D +RSS+A DV K ++GS VPVL+GEKL+MRILVDHSIVE+FGQGGRT ITSR+Y
Sbjct: 555 TFFCTDTSRSSVANDVVKPIYGSVVPVLKGEKLTMRILVDHSIVEAFGQGGRTCITSRVY 614
Query: 599 PTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPF 637
PT AIYGAA+LFLFNNA V A+ +W++NSAFIHP+
Sbjct: 615 PTTAIYGAAKLFLFNNALDATVTASFTVWQMNSAFIHPY 653
|
Possible role in the continued mobilization of sucrose to sink organs. Regulates root elongation. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1 | Back alignment and function description |
|---|
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/578 (65%), Positives = 452/578 (78%), Gaps = 14/578 (2%)
Query: 74 SKPTSFSNPEPRGVAEGVSAKSNSHLLR-NI---KGSYNWTNAMFTWQRTSFHFQPEKNW 129
++PT+ S RGV+ GVS KSN+ LL N+ GS+ W N M +WQRT+FHFQPEKNW
Sbjct: 64 TRPTTLS----RGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPEKNW 119
Query: 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDING 189
MNDPNGPL+YKGWYH FYQYNP+ AVWG+I WGHAVS DLIHWL+LP+AMV DQWYD NG
Sbjct: 120 MNDPNGPLYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDSNG 179
Query: 190 VWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249
VWTGSATILPDGQ++MLYTGST++ VQVQNLAYPAD +DPLL+DW+KYP NPVLVPP I
Sbjct: 180 VWTGSATILPDGQVIMLYTGSTNEFVQVQNLAYPADLNDPLLVDWIKYPSNPVLVPPPGI 239
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
PKDFRDPTTAW +GKWR+TIGSKI KTG++LVY T DFKTYE D L+AVPGTGMW
Sbjct: 240 LPKDFRDPTTAWLTTEGKWRITIGSKINKTGVALVYDTVDFKTYERKDMLLNAVPGTGMW 299
Query: 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEE 369
ECVDF+PV++ GLDTS TG +KHV+K SLDD + D+YA+GTY+ K+ D+ E
Sbjct: 300 ECVDFFPVSMKSENGLDTSFTGDEVKHVMKVSLDDDRHDYYALGTYDEKKVKFIADDFEN 359
Query: 370 DVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429
DVGIGL++DYG +YASK+FYD K RR++WGWI E+D+E D+ KGWASVQ+IPR V D
Sbjct: 360 DVGIGLRYDYGIFYASKTFYDQKKDRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLD 419
Query: 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LL 486
KTGSN++QWPV E+ESLR S F+ + V+PG+VV +DI ATQLDI AEFE + L
Sbjct: 420 KKTGSNLLQWPVAEVESLRLRSDEFQNLKVKPGAVVSVDIETATQLDIVAEFEIDKEALE 479
Query: 487 GSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCA 543
+ Y C SGGA R A+GPFGL V A + LSE TP++F G +T FC+
Sbjct: 480 KTAQSNVEYECNTSGGASRRGALGPFGLYVLADNGLSEYTPVYFYVVKGINGKLHTSFCS 539
Query: 544 DETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAI 603
D++RSSLA DV KQ++GS VPVL+GEKLS+RILVDHSIVESF QGGRT ITSR+YPT+AI
Sbjct: 540 DQSRSSLANDVHKQIYGSVVPVLEGEKLSLRILVDHSIVESFAQGGRTCITSRVYPTRAI 599
Query: 604 YGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQ 641
YGAARLFLFNNA NV A+LK+W++NSAFI P+ DQ
Sbjct: 600 YGAARLFLFNNAIETNVTASLKVWQMNSAFIRPYHPDQ 637
|
Vicia faba (taxid: 3906) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43348|INVA3_ARATH Acid beta-fructofuranosidase 3, vacuolar OS=Arabidopsis thaliana GN=BFRUCT3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/642 (59%), Positives = 461/642 (71%), Gaps = 38/642 (5%)
Query: 21 EQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFS 80
E SD R+P K A+ + + + V LI+ S+ I S+P
Sbjct: 19 ESRSDQIPETRRRRPIKVHLAVYSGLLLIALYVTLIVTHDG----SKAEIATESRPR--- 71
Query: 81 NPEPRGVAEGVSAKSNSHL-LRNIKG---SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGP 136
GVS KSN + + + G ++ W N + +WQRT+FHFQPEKNWMNDPNGP
Sbjct: 72 -------MAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHFQPEKNWMNDPNGP 124
Query: 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196
LFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHWLYLPIAMVPDQWYD NGVWTGSAT
Sbjct: 125 LFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSAT 184
Query: 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRD 256
L DG IVMLYTGSTD+ VQVQNLAYP DPSDPLLL WVK+ GNPVLVPP IG KDFRD
Sbjct: 185 FLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRD 244
Query: 257 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316
PTTAW GKWR+TIGSKI +TGISL+Y TTDFKTYE + LH VP TGMWECVDFYP
Sbjct: 245 PTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYP 304
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGI--G 374
V+ GLDTS GP +KHV+KAS+DDT++DHYAIGTY+ +N W PDNP DVGI G
Sbjct: 305 VSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTG 364
Query: 375 LKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGS 434
L++DYG+YYASK+FYD K RRI+WGWI E+D+E+ D++KGW+SVQ IPRTV+ D +T
Sbjct: 365 LRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHK 424
Query: 435 NVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE--------LL 486
N+VQWPVEEI+SLR +S F ++ + PG+VVP+D+G ATQLDI AEFE +
Sbjct: 425 NLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQLDIEAEFEIKTDDLKLFFDD 483
Query: 487 GSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT----NTY 540
S + + C +GG+ R A+GPFG V A + LSE TP++F TKG NT
Sbjct: 484 DSVEADNKFSCETNGGSTARGALGPFGFSVLADEGLSEQTPVYFY---VTKGKHSKLNTV 540
Query: 541 FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600
FC D +RS+LA DV K ++GS VPVL+GEKL+MRILVDHSIVE F QGGR+ ITSR+YPT
Sbjct: 541 FCTDTSRSTLANDVVKPIYGSFVPVLKGEKLTMRILVDHSIVEGFAQGGRSCITSRVYPT 600
Query: 601 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
KAIYGA +LFLFNNA V A+ +W++N+AFIHP+ D +
Sbjct: 601 KAIYGATKLFLFNNAIDATVTASFTVWQMNNAFIHPYSSDDL 642
|
Possible role in the continued mobilization of sucrose to sink organs. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|O24509|INVA_PHAVU Acid beta-fructofuranosidase OS=Phaseolus vulgaris PE=2 SV=1 | Back alignment and function description |
|---|
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/585 (63%), Positives = 451/585 (77%), Gaps = 11/585 (1%)
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRTSFHF 123
Q + PTS P+S + RGV+ GVS KS+S L G+ + W N+M +WQRTSFHF
Sbjct: 62 QEHQSPTSLPSSKWHAVSRGVSSGVSEKSSSMLFSGEGGASEAFPWDNSMLSWQRTSFHF 121
Query: 124 QPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ 183
QPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AMV DQ
Sbjct: 122 QPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQ 181
Query: 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243
WYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLL+DW+K+PGNPVL
Sbjct: 182 WYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKHPGNPVL 241
Query: 244 VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV 303
VPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL + +L AV
Sbjct: 242 VPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTDDFKTYELKNGHLRAV 301
Query: 304 PGTGMWECVDFYPVAINGSVGLDTSAT--GPGIKHVLKASLDDTKVDHYAIGTYNPANDK 361
PGTGMWECVDF+PV+ GLDTS + G +K+V+K SLDD + D+Y IGTY+
Sbjct: 302 PGTGMWECVDFFPVSKKNENGLDTSLSINGAEVKYVMKVSLDDDRHDYYTIGTYDENKVL 361
Query: 362 WTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQT 421
+TPD+ + DVG+GL++DYG +YASK+FYD RRI+WGWI E+D+E D+ KGWASVQ+
Sbjct: 362 FTPDDVKNDVGVGLRYDYGIFYASKTFYDQNMDRRILWGWIGESDSEYADVTKGWASVQS 421
Query: 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEF 481
IPRTV D KTGSN++QWPV E+ESLR S F+ + +PGSVV LDI ATQLD+ AEF
Sbjct: 422 IPRTVRLDKKTGSNLLQWPVAEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEF 481
Query: 482 ETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG 536
E + L + E + C SGGA R A+GPFGLLV A + LSE TP++F G
Sbjct: 482 EIDAESLQKTAQSNEEFTCSTSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNG 541
Query: 537 T-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITS 595
T FC+D++RSS DV KQ+ G+ VPVL+GEK S+R+LVDHSIVESF QGGRT +TS
Sbjct: 542 NLKTSFCSDQSRSSQPNDVRKQIFGNIVPVLEGEKFSLRMLVDHSIVESFAQGGRTCVTS 601
Query: 596 RIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLD 640
R+YPTKAIYGAARLFLFNNAT V A+LKIW++NSAFI PFP +
Sbjct: 602 RVYPTKAIYGAARLFLFNNATEATVTASLKIWQMNSAFIRPFPFN 646
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P49175|INV1_MAIZE Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/574 (64%), Positives = 438/574 (76%), Gaps = 20/574 (3%)
Query: 85 RGVAEGVSAKSNSHLL-RNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWY 143
RGVAEGVS KS + LL ++WTNAM WQRT+FHFQP KNWMNDPNGPL++KGWY
Sbjct: 91 RGVAEGVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQPPKNWMNDPNGPLYHKGWY 150
Query: 144 HLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203
HLFYQ+NPDSAVWGNITWGHAVS DL+HWL+LP+AMVPD YD NGVW+GSAT LPDG+I
Sbjct: 151 HLFYQWNPDSAVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWSGSATRLPDGRI 210
Query: 204 VMLYTGST-DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW- 261
VMLYTGST + S QVQNLA PAD SDPLL +WVK NPVLVPP IGP DFRDPTTA
Sbjct: 211 VMLYTGSTAESSAQVQNLAEPADASDPLLREWVKSDANPVLVPPPGIGPTDFRDPTTACR 270
Query: 262 --AGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
AG D WR+ IGSK G++LVY+T DF Y+ +HAVPGTGMWECVDFYPVA
Sbjct: 271 TPAGNDTAWRVAIGSKDRDHAGLALVYRTEDFVRYDPAPALMHAVPGTGMWECVDFYPVA 330
Query: 319 INGSVG------LDTSAT-GPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
L+TSA GPG+KHVLKASLDD K D+YAIGTY+PA D WTPD+ E+DV
Sbjct: 331 AGSGAAAGSGDGLETSAAPGPGVKHVLKASLDDDKHDYYAIGTYDPATDTWTPDSAEDDV 390
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL++DYG+YYASK+FYDP +RR++WGW+ ETD+E D+ KGWASVQ+IPRTVL D K
Sbjct: 391 GIGLRYDYGKYYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSIPRTVLLDTK 450
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAM 491
TGSN++QWPV E+E+LR + F+ V ++ GSVVPLD+G ATQLDI A FE + + +
Sbjct: 451 TGSNLLQWPVVEVENLRMSGKSFDGVALDRGSVVPLDVGKATQLDIEAVFEVDASDAAGV 510
Query: 492 EEG---YGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADE 545
E + C S GA R +GPFGLLV A D LSE T ++F T G+ T+FC DE
Sbjct: 511 TEADVTFNCSTSAGAAGRGLLGPFGLLVLADDDLSEQTAVYFYLLKGTDGSLQTFFCQDE 570
Query: 546 TRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYG 605
R+S A D+ K+V+GS VPVL GE LS+RILVDHSIVESF QGGRT ITSR+YPT+AIY
Sbjct: 571 LRASKANDLVKRVYGSLVPVLDGENLSVRILVDHSIVESFAQGGRTCITSRVYPTRAIYD 630
Query: 606 AARLFLFNNATGVNVKA-TLKIWRLNSAFIHPFP 638
+AR+FLFNNAT +VKA ++KIW+LNSA+I P+P
Sbjct: 631 SARVFLFNNATHAHVKAKSVKIWQLNSAYIRPYP 664
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q5FC15|GFT_ASPOF 6(G)-fructosyltransferase OS=Asparagus officinalis GN=FT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust.
Identities = 302/555 (54%), Positives = 391/555 (70%), Gaps = 17/555 (3%)
Query: 102 NIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITW 161
+++ Y WTN M TWQR FHF+ KN+MNDP+GP++YKGWYHLFYQ+NP+ A WG+I+W
Sbjct: 52 SVEPEYAWTNQMLTWQRAGFHFRTVKNYMNDPSGPMYYKGWYHLFYQHNPNYAYWGDISW 111
Query: 162 GHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNL 220
GHAVS DL++W +LP+A+ PD+WYDI GVWTGS T++PD G++VMLYTG T + Q+ ++
Sbjct: 112 GHAVSRDLLNWFHLPVAVKPDRWYDIYGVWTGSITVMPDDGRVVMLYTGGTKEKYQIMSV 171
Query: 221 AYPADPSDPLLLDWVKYPG-NPVLVPPRHIGPKDFRDPTTAWAGP-DGKWRLTIGSK--- 275
A ADPSDPLL++WVKY NPVL PP IG DFRDP W D W+L IGSK
Sbjct: 172 AMAADPSDPLLVEWVKYDEVNPVLRPPPGIGLTDFRDPNPIWYNTTDSTWQLVIGSKNDS 231
Query: 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSV---GLDTSAT-G 331
+ TGI++VY T DF LL LH+V GMWECVD +PVA +G + GLD S
Sbjct: 232 LQHTGIAMVYTTKDFINLTLLPGVLHSVDHVGMWECVDLFPVASSGPLIGRGLDRSMMLA 291
Query: 332 PGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDP 391
+KHVLKAS++D D+YAIG+Y+ A +W PD+ DVGIG++ D+G++YAS++FYDP
Sbjct: 292 DNVKHVLKASMNDEWHDYYAIGSYDVATHRWVPDDESVDVGIGMRIDWGKFYASRTFYDP 351
Query: 392 YKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNS 451
K+RR++WG++ ETD+ D+ KGWAS Q IPRTVL+D KTG+NV+ WP+EE+ESLR
Sbjct: 352 VKERRVMWGYVGETDSGDADVAKGWASFQGIPRTVLFDVKTGTNVLTWPIEEVESLRMTR 411
Query: 452 TVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SGGAIDRSA 506
F ++VV GS V L +G A QLDI AEFE + L + + GY C SGGA+ R
Sbjct: 412 KDFSDIVVNKGSTVELHVGDANQLDIEAEFEMDKDALETAIEADIGYNCSSSGGAVSRGV 471
Query: 507 MGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPV 565
+GPFGL V A+ L+ELT +F S T G+ +T+ C DE RSS A D+ K+V G V
Sbjct: 472 LGPFGLFVLANQDLTELTATYFYVSRATDGSLHTHLCHDEMRSSKANDIVKRVVGGTFTV 531
Query: 566 LQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKA-TL 624
L GE LS+RILVDHSIVESF QGGRT TSR+YPT+AIY AR+FLFNNATG + A +
Sbjct: 532 LDGELLSLRILVDHSIVESFAQGGRTSATSRVYPTEAIYERARVFLFNNATGATITAKAV 591
Query: 625 KIWRLNSAFIHPFPL 639
K+W++NS +P
Sbjct: 592 KVWQMNSTSNQYYPF 606
|
Invloved in the synthesis of fructan of the inulin neoseries. Has no 1-FFT activity. Asparagus officinalis (taxid: 4686) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 4 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 642 | ||||||
| 115548295 | 642 | beta-fructofuranosidase [Citrus sinensis | 1.0 | 1.0 | 0.995 | 0.0 | |
| 19705584 | 588 | vacuolar invertase [Citrus sinensis] | 0.915 | 1.0 | 0.898 | 0.0 | |
| 399138442 | 643 | soluble acid invertase [Litchi chinensis | 0.979 | 0.978 | 0.773 | 0.0 | |
| 384371334 | 639 | vacuolar invertase [Manihot esculenta] | 0.959 | 0.964 | 0.770 | 0.0 | |
| 255539759 | 639 | Beta-fructofuranosidase, soluble isoenzy | 0.971 | 0.976 | 0.762 | 0.0 | |
| 310722811 | 648 | vacuolar invertase 1 [Gossypium hirsutum | 0.942 | 0.933 | 0.728 | 0.0 | |
| 229597364 | 645 | vacuolar invertase [Gossypium hirsutum] | 0.942 | 0.937 | 0.726 | 0.0 | |
| 116744388 | 645 | Soluble acid invertase [Pyrus pyrifolia | 0.987 | 0.982 | 0.699 | 0.0 | |
| 186397271 | 645 | soluble acid invertase [Pyrus pyrifolia] | 0.987 | 0.982 | 0.701 | 0.0 | |
| 268526570 | 618 | vacuolar invertase 2 [Gossypium hirsutum | 0.954 | 0.991 | 0.713 | 0.0 |
| >gi|115548295|dbj|BAF34363.1| beta-fructofuranosidase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/642 (99%), Positives = 639/642 (99%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA S DLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAASTDLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE
Sbjct: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY
Sbjct: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
Query: 541 FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600
FCADETRSSLAPDVFKQV GSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT
Sbjct: 541 FCADETRSSLAPDVFKQVRGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600
Query: 601 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI
Sbjct: 601 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19705584|gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/642 (89%), Positives = 580/642 (90%), Gaps = 54/642 (8%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLH+PP YPPLLPEEQPSDAG PASHRKPFKGFAAILAS IFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHSPPQYPPLLPEEQPSDAGPPASHRKPFKGFAAILASVIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVL+PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLMPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH GTYNP ND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHNKTGTYNPEND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
LDI SAE
Sbjct: 421 ----------------------------------------------LDI--------SAE 426
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
FETELLGSGA EEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY
Sbjct: 427 FETELLGSGAPEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 486
Query: 541 FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600
FCADETRSSLAPDVFKQVHGSKVPV+QGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT
Sbjct: 487 FCADETRSSLAPDVFKQVHGSKVPVIQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 546
Query: 601 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI
Sbjct: 547 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 588
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138442|gb|AFP23357.1| soluble acid invertase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/640 (77%), Positives = 550/640 (85%), Gaps = 11/640 (1%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALII-NQTQKPLP 65
HLHAP YY PL E PS G PA+ R+P KGFA ILAS IFLLSLV LII NQ+++PL
Sbjct: 8 HLHAP-YYTPL--PEHPSTGGPPATLRRPLKGFALILASVIFLLSLVGLIIINQSRQPLQ 64
Query: 66 SQNNIV-----PTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
+ + V + P SFS PRGV EGVSAKSN + SYNWTNAMF+WQRTS
Sbjct: 65 NSTSNVNIPSLLSPPPPSFSRRVPRGVEEGVSAKSNPSPFDQ-ESSYNWTNAMFSWQRTS 123
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQP +NWMNDP+GPL++ GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLPIAMV
Sbjct: 124 FHFQPTRNWMNDPDGPLYHMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIAMV 183
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQ YDINGVWTGSAT+LPDGQIVMLYTG T + VQVQNLAYPA+ SDPLLL WVKY GN
Sbjct: 184 PDQPYDINGVWTGSATLLPDGQIVMLYTGDTAELVQVQNLAYPANLSDPLLLHWVKYSGN 243
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPP HI PKDFRDPTT W GPDGKWR+TIGSKI TG SL+Y TTDFKTYELLD L
Sbjct: 244 PVLVPPTHIAPKDFRDPTTGWIGPDGKWRITIGSKINGTGFSLIYHTTDFKTYELLDHVL 303
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGS+GLDTSA GPGIKHVLKASLDDTK+DHYA+GTY+P +D
Sbjct: 304 HAVPGTGMWECVDFYPVAINGSMGLDTSAGGPGIKHVLKASLDDTKLDHYALGTYDPDSD 363
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
WTPDNPEEDVGIGL++D GRYYASK+FYD Y+KRRI+WGWINETDTE DDLEKGWASVQ
Sbjct: 364 TWTPDNPEEDVGIGLRYDNGRYYASKTFYDQYRKRRILWGWINETDTEYDDLEKGWASVQ 423
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
TIPRTVL+DNKTG N+VQWPV+E+ESLRQ S FE+V++EPGS+VPLDIG ATQLDI AE
Sbjct: 424 TIPRTVLFDNKTGINIVQWPVQEVESLRQRSIEFEDVLIEPGSIVPLDIGTATQLDIFAE 483
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NT 539
FETELL S EEGY C GGAI+R+ +GPFGLLV A DSLSELTP+FFR +NTT GT +T
Sbjct: 484 FETELLESAGEEEGYSCKGGAINRNKLGPFGLLVIADDSLSELTPVFFRPTNTTNGTLDT 543
Query: 540 YFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYP 599
YFC DETRS+LAP+V K ++GS VPVL+GE+ +MR+LVDHSIVESF QGGRTVITSRIYP
Sbjct: 544 YFCTDETRSTLAPEVQKHIYGSTVPVLEGERYAMRVLVDHSIVESFAQGGRTVITSRIYP 603
Query: 600 TKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPL 639
T+AIYG+ARLFLFNNATGVNVKATLKIW++NSAFIHPFPL
Sbjct: 604 TEAIYGSARLFLFNNATGVNVKATLKIWQMNSAFIHPFPL 643
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371334|gb|AFH77956.1| vacuolar invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/622 (77%), Positives = 537/622 (86%), Gaps = 6/622 (0%)
Query: 22 QPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQN-NIVP-TSKPTSF 79
QPS AG P R+P K F+ AS IFLLSLV LIINQ+Q+PLP+ N N P T K TSF
Sbjct: 20 QPSTAGPPIKLRRPLKVFSVTFASFIFLLSLVTLIINQSQEPLPTPNKNPSPSTPKATSF 79
Query: 80 SNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFY 139
+ EPRGVAEGVSAKSN + SYNWTNAMF WQRT++HFQPE+NWMN P+GPLF+
Sbjct: 80 AKREPRGVAEGVSAKSNPSFFSD-GVSYNWTNAMFYWQRTAYHFQPERNWMNGPDGPLFH 138
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP 199
GWYHLFYQYNPDSAVWGNITWGHAVS DLIHW +LP AMVPDQWYDINGVWTGSAT+LP
Sbjct: 139 MGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWFHLPFAMVPDQWYDINGVWTGSATLLP 198
Query: 200 DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259
DGQI+MLYTG T SVQVQNLAYPA+ SDPLL+DW+KYPGNPVLVPP I +FRDPTT
Sbjct: 199 DGQIMMLYTGDTIDSVQVQNLAYPANLSDPLLIDWIKYPGNPVLVPPPGIETDEFRDPTT 258
Query: 260 AWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
W GPDGKWR+TIGS++ +T G+SLVYQTT+F TYELL+ +LHAVPGTGMWECVDFYPVA
Sbjct: 259 GWLGPDGKWRITIGSRVNETIGVSLVYQTTNFTTYELLEGFLHAVPGTGMWECVDFYPVA 318
Query: 319 INGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWD 378
INGS+GLDTSA GP KHVLKASLDDTK+DHYA+GTY+P D+WTPDNP+EDVGIGL+ D
Sbjct: 319 INGSLGLDTSANGPDTKHVLKASLDDTKIDHYALGTYDPVTDRWTPDNPKEDVGIGLRVD 378
Query: 379 YGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQ 438
YGRYYASK+FYD KKRRI+WGWINETDTE DDLEKGWASVQTIPR VL+DNKTG+N++Q
Sbjct: 379 YGRYYASKTFYDQQKKRRILWGWINETDTEEDDLEKGWASVQTIPRAVLFDNKTGTNLLQ 438
Query: 439 WPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCS 498
WPVEEIESLR NST FEE+++ PGSVVPLDIGVATQLDI AEFETEL+ +EE Y CS
Sbjct: 439 WPVEEIESLRLNSTDFEEILIGPGSVVPLDIGVATQLDIFAEFETELISDSVVEE-YDCS 497
Query: 499 GGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQ 557
GGA+DRS +GPFG+LV A +LSELTP+FFR N+T GT TYFCADETRSS APDVFKQ
Sbjct: 498 GGAVDRSPLGPFGILVIADQTLSELTPVFFRPVNSTDGTLKTYFCADETRSSKAPDVFKQ 557
Query: 558 VHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATG 617
V+GS VPVL+GEKL MR+LVDHSIVESF QGGRTV+TSR+YPT+AIYGAARLFLFNNAT
Sbjct: 558 VYGSTVPVLEGEKLGMRVLVDHSIVESFAQGGRTVMTSRVYPTEAIYGAARLFLFNNATS 617
Query: 618 VNVKATLKIWRLNSAFIHPFPL 639
VNVKATLKIW+LNSAFI PFPL
Sbjct: 618 VNVKATLKIWQLNSAFIRPFPL 639
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539759|ref|XP_002510944.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] gi|223550059|gb|EEF51546.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/637 (76%), Positives = 538/637 (84%), Gaps = 13/637 (2%)
Query: 9 HAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQN 68
HAP PLL EQPS G R+P K F AS IFLLSLV LI+NQ+Q PLP+ N
Sbjct: 11 HAP--CTPLL--EQPSLLGPSTKLRRPLKVFTVTFASLIFLLSLVTLIMNQSQGPLPTPN 66
Query: 69 -NIVP-TSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPE 126
N P T K TSFS PRGVAEGVSAKSN N SYNWTNAM +WQRT++HFQPE
Sbjct: 67 KNRSPSTPKSTSFSEHVPRGVAEGVSAKSNPSFFSN-GVSYNWTNAMLSWQRTAYHFQPE 125
Query: 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD 186
KNWMN GPLFY GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLP+AMVPD+WYD
Sbjct: 126 KNWMN---GPLFYMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPMAMVPDKWYD 182
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP 246
INGVWTGSAT+LPDGQIVMLYTG T+ SVQVQNLAYPA+ SDPLL+DW+KYPGNPVLVPP
Sbjct: 183 INGVWTGSATLLPDGQIVMLYTGDTNASVQVQNLAYPANLSDPLLIDWIKYPGNPVLVPP 242
Query: 247 RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYLHAVPG 305
I +FRDPTTAW GPDG WR+T+GS++ +T GISLVYQTT+F TYELLD LHAVPG
Sbjct: 243 PGIETDEFRDPTTAWMGPDGTWRITLGSRMNETVGISLVYQTTNFTTYELLDGLLHAVPG 302
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
TGMWECVDFYPVAINGS GLDTS GPG+KHVLKASLD+TK+D+YA+GTY+P DKWTPD
Sbjct: 303 TGMWECVDFYPVAINGSKGLDTSVNGPGVKHVLKASLDNTKLDYYALGTYDPVTDKWTPD 362
Query: 366 NPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRT 425
NPEEDVGIGL+ DYGRYYASKSFYD YK+RRI+WGWINETDTE DDL+KGWASVQTIPR
Sbjct: 363 NPEEDVGIGLRVDYGRYYASKSFYDQYKQRRILWGWINETDTEQDDLQKGWASVQTIPRN 422
Query: 426 VLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETEL 485
VL+DNKTG+N++QWPVEEIESLR NST F+E+V+ PGSVVPL+IG ATQLDI AEFETEL
Sbjct: 423 VLFDNKTGANLLQWPVEEIESLRVNSTDFQEIVIAPGSVVPLEIGTATQLDIFAEFETEL 482
Query: 486 LGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCAD 544
+ + EE YGCSGGA+DRS++GPFGLLV A +SLSELTP+FFR N+T T TYFCAD
Sbjct: 483 ISESSTEE-YGCSGGAVDRSSLGPFGLLVLADESLSELTPVFFRPVNSTDDTLKTYFCAD 541
Query: 545 ETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIY 604
ETRSS AP+VFKQV+GS VPVL EKL MR+LVDHSIVESF QGGRTVITSRIYPT+AIY
Sbjct: 542 ETRSSKAPEVFKQVYGSTVPVLDDEKLRMRVLVDHSIVESFAQGGRTVITSRIYPTEAIY 601
Query: 605 GAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQ 641
GAARLFLFNNAT VNVKATLKIW L SAFI PFP D+
Sbjct: 602 GAARLFLFNNATDVNVKATLKIWELTSAFIRPFPFDE 638
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|310722811|gb|ADP08983.1| vacuolar invertase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/611 (72%), Positives = 519/611 (84%), Gaps = 6/611 (0%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I+ S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 31 RPLKGFAVIIGSVVFLLSLVTLIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 89
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 90 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 147
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST+
Sbjct: 148 AIWGNITWGHAVSTDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTND 207
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I ++FRDPTTAW GPDG WR+ +G
Sbjct: 208 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDEEFRDPTTAWLGPDGSWRIVVG 267
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F YELLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 268 TRFNTTIGTALVFQTTNFSDYELLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 327
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 328 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 387
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETD+E+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 388 KQRRILYGWVNETDSEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 447
Query: 453 VFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAME-EGYGCSGGAIDRSAMGPFG 511
VF++VVVE GSVVPLDIG ATQLDI AEFE E L + E E C GA+DRS GPFG
Sbjct: 448 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLVLNSTEDEVSDCGDGAVDRSTYGPFG 507
Query: 512 LLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEK 570
+LV A DSLSELTPI+FR NT+ G+ TYFCADETRSS APDV K+V+G K+PVL E
Sbjct: 508 VLVIADDSLSELTPIYFRPLNTSDGSLETYFCADETRSSKAPDVTKRVYGGKIPVLDDEN 567
Query: 571 LSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLN 630
+MR+LVDHS+VESFG GGRTVITSR+YPT+AIYGAARLFLFNNA+GVNVKATLKIW +N
Sbjct: 568 YNMRVLVDHSVVESFGGGGRTVITSRVYPTEAIYGAARLFLFNNASGVNVKATLKIWEMN 627
Query: 631 SAFIHPFPLDQ 641
SAFI PFP ++
Sbjct: 628 SAFIRPFPFEE 638
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|229597364|gb|ACQ82802.1| vacuolar invertase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/611 (72%), Positives = 519/611 (84%), Gaps = 6/611 (0%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 28 RPLKGFAVIFGSVVFLLSLVILIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 86
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 87 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 144
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST++
Sbjct: 145 AIWGNITWGHAVSKDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTNE 204
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I +FRDPTTAW GPDG WR+T+G
Sbjct: 205 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDNEFRDPTTAWLGPDGSWRITVG 264
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F Y+LLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 265 TRFNTTIGTALVFQTTNFSDYQLLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 324
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 325 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 384
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETDTE+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 385 KQRRILYGWVNETDTEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 444
Query: 453 VFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAME-EGYGCSGGAIDRSAMGPFG 511
VF++VVVE GSVVPLDIG ATQLDI AEFE E L S + E E C GA+DR+ GPFG
Sbjct: 445 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLVSNSTEDEVSDCGDGAVDRNTYGPFG 504
Query: 512 LLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEK 570
+LV A DSLSELTPI+FR N + G+ TYFCADETRSS AP+V K+V+G KVPVL E
Sbjct: 505 VLVIADDSLSELTPIYFRPLNISDGSLETYFCADETRSSKAPNVTKRVYGGKVPVLDDEN 564
Query: 571 LSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLN 630
+MR+LVDHS+VESFG+GGRTVITSR+YPT+AIYGAARLFLFNNA+ VNVKATLKIW +N
Sbjct: 565 YNMRVLVDHSVVESFGEGGRTVITSRVYPTEAIYGAARLFLFNNASRVNVKATLKIWEMN 624
Query: 631 SAFIHPFPLDQ 641
SAFI PFP ++
Sbjct: 625 SAFIRPFPFEE 635
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116744388|dbj|BAF35858.1| Soluble acid invertase [Pyrus pyrifolia var. culta] | Back alignment and taxonomy information |
|---|
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/653 (69%), Positives = 524/653 (80%), Gaps = 19/653 (2%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I +S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFSSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIP+TVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPKTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQLDISAEFETELLGSGAMEEG-YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRS 530
ATQLDIS +F+ E L + G GC GA+DRS GPFG+LV A +SLSELTP++FR
Sbjct: 473 ATQLDISVDFKIESLDTEESVNGSSGCGDGAVDRSTFGPFGILVIADESLSELTPVYFRV 532
Query: 531 SNTTKG-TNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGG 589
+N+T G TYFCADE+RSS AP+VFKQV+G KVPVL GE S R+LVDHSIVES+ QGG
Sbjct: 533 TNSTDGDVTTYFCADESRSSKAPEVFKQVYGGKVPVLDGETYSARVLVDHSIVESYAQGG 592
Query: 590 RTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
R VI+SR+YPT+AIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI
Sbjct: 593 RMVISSRVYPTEAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 645
|
Source: Pyrus pyrifolia var. culta Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186397271|dbj|BAG30919.1| soluble acid invertase [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/653 (70%), Positives = 523/653 (80%), Gaps = 19/653 (2%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFPSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIPRTVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPRTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQLDISAEFETELLGSGAMEEG-YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRS 530
ATQLDIS +F+ E L + G GC GA+DRS GPFG+LV A +SLSELTP++FR
Sbjct: 473 ATQLDISVDFKIESLDTEESVNGSSGCGDGAVDRSTFGPFGILVIADESLSELTPVYFRV 532
Query: 531 SNTTKG-TNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGG 589
+N+T G TYFCADE+RSS AP+VFKQV+G KVPVL GE S R+LVDHSIVES+ QGG
Sbjct: 533 TNSTDGDVTTYFCADESRSSKAPEVFKQVYGGKVPVLDGETYSARVLVDHSIVESYAQGG 592
Query: 590 RTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 642
R VI+SR+YPT+AIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI
Sbjct: 593 RMVISSRVYPTEAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQI 645
|
Source: Pyrus pyrifolia Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|268526570|gb|ACZ05614.1| vacuolar invertase 2 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/643 (71%), Positives = 520/643 (80%), Gaps = 30/643 (4%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
M+ Y PP + PLL D +P + R FAAI A + LL L+ALIINQ
Sbjct: 1 MEASYDPEQNPPLHAPLL------DRSSPRTRR-----FAAIFACLVSLLLLLALIINQA 49
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Q+P F +PRGVAEGVSAKSN LL + +NWTNAMF+WQR++
Sbjct: 50 QQP---------------FEKVQPRGVAEGVSAKSNPSLLNQVP--FNWTNAMFSWQRSA 92
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+HFQP+KNWMNDPNGPL++KGWYHLFYQYNP SA+WGNITWGHAVS DLIHWLYLP+A+V
Sbjct: 93 YHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPYSAIWGNITWGHAVSRDLIHWLYLPLALV 152
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PD WYDI GVWTGSATIL DGQI+MLYTG T++SVQVQNLAYPA+ SDPLLL W+KYPGN
Sbjct: 153 PDHWYDIKGVWTGSATILADGQIIMLYTGETNESVQVQNLAYPANVSDPLLLHWLKYPGN 212
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEY 299
PV+VPP + P DFRDPTTAW GPDG WRLT+GSK T GISLVY TT+F+ YELLD
Sbjct: 213 PVMVPPPGVKPDDFRDPTTAWLGPDGTWRLTMGSKFDTTIGISLVYHTTNFRDYELLDGV 272
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
LHAVPGTGMWECVDFYPVAINGSV LDTS+ GPGIKHVLKASLD+TKVDHYAIGTY+P
Sbjct: 273 LHAVPGTGMWECVDFYPVAINGSVALDTSSLGPGIKHVLKASLDNTKVDHYAIGTYDPIT 332
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
DKWTPDNPEEDVGIGLK DYGRYYASK+F+D +K+RR++WGWINETDTE+ DL+KGWAS+
Sbjct: 333 DKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQHKQRRVLWGWINETDTETADLKKGWASL 392
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISA 479
QTIPRTVLYDNKTG+N++QWPVEE+ESLR NST+F+EV+VEPGSVVPLDIG TQLDI A
Sbjct: 393 QTIPRTVLYDNKTGTNLLQWPVEEVESLRLNSTMFKEVLVEPGSVVPLDIGTTTQLDILA 452
Query: 480 EFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-N 538
EFE E L E C GA+DRS GPFGLLV A SLSELTPI+FR N + G+
Sbjct: 453 EFEIEPLIPSTTNEIDNCGDGAVDRSTYGPFGLLVIADASLSELTPIYFRPLNASDGSLK 512
Query: 539 TYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIY 598
TYFC+DETRSS A DVFKQV+G KVPVL E +MR+LVDHSIVESF QGGRTVI+SRIY
Sbjct: 513 TYFCSDETRSSKASDVFKQVYGGKVPVLDDENYNMRVLVDHSIVESFAQGGRTVISSRIY 572
Query: 599 PTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPFPLDQ 641
PT+AIYGAARLFLFNNATGVNVKATLKIW LNSAFI PFP ++
Sbjct: 573 PTEAIYGAARLFLFNNATGVNVKATLKIWELNSAFIRPFPFER 615
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P93761 | INV1_CAPAN | 3, ., 2, ., 1, ., 2, 6 | 0.6554 | 0.9517 | 0.9546 | N/A | no |
| P29000 | INVA_SOLLC | 3, ., 2, ., 1, ., 2, 6 | 0.6442 | 0.9470 | 0.9559 | N/A | no |
| P80065 | INVB_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.6265 | 0.9953 | 0.9667 | N/A | no |
| P49175 | INV1_MAIZE | 3, ., 2, ., 1, ., 2, 6 | 0.6411 | 0.8629 | 0.8268 | N/A | no |
| P92916 | GFT_ALLCE | 2, ., 4, ., 1, ., 2, 4, 3 | 0.5281 | 0.8271 | 0.8676 | N/A | no |
| Q5FC15 | GFT_ASPOF | 2, ., 4, ., 1, ., 2, 4, 3 | 0.5441 | 0.8380 | 0.8819 | N/A | no |
| Q39041 | INVA4_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.6009 | 0.9517 | 0.9201 | yes | no |
| Q9FSV7 | SST_FESAR | 2, ., 4, ., 1, ., 9, 9 | 0.5349 | 0.8660 | 0.8501 | N/A | no |
| Q43857 | INVA_VICFA | 3, ., 2, ., 1, ., 2, 6 | 0.6505 | 0.8785 | 0.8785 | N/A | no |
| O24509 | INVA_PHAVU | 3, ., 2, ., 1, ., 2, 6 | 0.6341 | 0.8940 | 0.8817 | N/A | no |
| P29001 | INVA_VIGRR | 3, ., 2, ., 1, ., 2, 6 | 0.6043 | 0.9704 | 0.9599 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 642 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 0.0 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-153 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 5e-96 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 2e-77 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 9e-56 | |
| pfam11837 | 106 | pfam11837, DUF3357, Domain of unknown function (DU | 1e-31 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 6e-30 | |
| pfam08244 | 83 | pfam08244, Glyco_hydro_32C, Glycosyl hydrolases fa | 2e-17 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 3e-17 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 3e-16 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 544 bits (1405), Expect = 0.0
Identities = 218/478 (45%), Positives = 279/478 (58%), Gaps = 51/478 (10%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGNI WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGST--DKSVQVQNLAYPADPSDPLLLDWVKYPG 239
D+WYD NGV++GSA I P + +LYTG+ D +VQVQ AY SD L W KY G
Sbjct: 61 DEWYDSNGVFSGSAVIDPGN-LSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG-SKIGKTGISLVYQTTDFKTYELLDE 298
NPVL PP G + FRDP W D KW + IG S K GI+L+Y++TD K + LL E
Sbjct: 120 NPVLTPPPGGGTEHFRDPKVFWYDGD-KWYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 299 YLHAVPG--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+LH++ G GMWEC D +P+ G KHVLK S ++Y +G ++
Sbjct: 179 FLHSLLGDTGGMWECPDLFPL----------PGEGDTSKHVLKVSPQGGSGNYYFVGYFD 228
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLE-K 414
+D +TPD+P D G GL+ DYG +YAS++FYDP RRI+ GW+ D+ +DD+ K
Sbjct: 229 G-DDTFTPDDP-VDTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQ 474
GWA ++PR + D TG ++QWPVEE+ESLR N + ++ GSV L A+
Sbjct: 287 GWAGALSLPRELTLD-LTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
Query: 475 --LDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSN 532
+I FE +D GPFGLLV A LSE T +++ SN
Sbjct: 345 DSYEIELSFE-------------------VDSGTAGPFGLLVRASKDLSEQTAVYYDVSN 385
Query: 533 TTKGTNTYFCADETRSSLAPD-VFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGG 589
T C D S + D FK V G+ VP+ GE LS+RILVD S VE F GG
Sbjct: 386 GT------LCLDRRSSGGSFDEAFKGVRGAFVPLDPGETLSLRILVDRSSVEIFANGG 437
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 443 bits (1143), Expect = e-153
Identities = 164/327 (50%), Positives = 214/327 (65%), Gaps = 30/327 (9%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGN WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNP 241
D+WYD NG ++GSA +LPD +V+LYTG+TD+S QVQ LAY AD W KYPGNP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 242 VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDFKTYELLDEYL 300
V++ P K FRDP AW PDGKW + +G++ K G +L+Y++ D K +ELL E L
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 301 HAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD---DTKVDHYAIGTYN 356
H+VP G GMWEC D +PV D GP +KHVLK S + D+Y IGT++
Sbjct: 176 HSVPDGGGMWECPDLFPV--------DGKDNGP-VKHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDL--E 413
D +TP + + DYG +YAS++FYDP +RRI+ GW+ E D+E+DD+
Sbjct: 227 ADGDTFTPPDEQR-------LDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
KGWA +IPR + ++ G ++QWP
Sbjct: 280 KGWAGALSIPRELTLKDE-GGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 5e-96
Identities = 122/328 (37%), Positives = 164/328 (50%), Gaps = 42/328 (12%)
Query: 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
WMNDPNG +++ G YHLFYQYNP VWGN+ WGHA S DL+HW +LP+A+ PD YD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 188 NGVWTGSATILPDGQIVMLYTGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244
G ++GSA + +G++V+ YTG+ Q Q LAY S + KY GNPV+
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 245 PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYL-HA 302
PP FRDP W DGKW + +G+ TG L+Y++ D K +E L E L
Sbjct: 117 PP-DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSL 173
Query: 303 VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH------YAIGTYN 356
MWEC D +P+ + G K VL S + + Y +G ++
Sbjct: 174 GDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDFD 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415
+ E DYG +YA ++F DP RRI+ GW+ D E E G
Sbjct: 221 GTTFTFDHTEFGE-------LDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDG 272
Query: 416 WASVQTIPRTVLYDNKTGSNVVQWPVEE 443
WA T+PR + K G + Q PV E
Sbjct: 273 WAGCLTLPRELSL--KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 2e-77
Identities = 146/498 (29%), Positives = 223/498 (44%), Gaps = 81/498 (16%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P W+NDPNG +++ G YHLFYQYNP A G WGHAVS DL+HW +LPI
Sbjct: 29 RPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPI 88
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS----VQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA ++ DG + + YTG+ S Q Q +AY D
Sbjct: 89 ALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSED-----GGT 142
Query: 234 WVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFK 291
+ KY GNP++ P + FRDP W GKW + +G++ G L+Y++ D K
Sbjct: 143 FEKYSGNPIIDQPEGYT--PHFRDPKVVW-DEGGKWWMMLGAQGEDLKGTILLYESDDLK 199
Query: 292 TYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH- 349
++ E+ G G MWEC D + + +G L G I + +
Sbjct: 200 NWQFTGEFGLEQGGLGYMWECPDLFEL--DGEDVLLFWPQGLSING-----GEYDNIYQS 252
Query: 350 -YAIGTYNPANDKWTPDNPEEDVGIGLKW-DYGR-YYASKSFYDPYKKRRIVWGWIN--- 403
Y +G ++ + D+ + + D+G +YA ++F DP RRI+ GW+
Sbjct: 253 GYFVGDFDGKE--FKLDDGQ------FRELDFGFDFYAPQTFLDPD-GRRILIGWMGNWD 303
Query: 404 -ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPG 462
+ + D +GW T+PR + ++ + Q PV E+ESLR+ +
Sbjct: 304 YTNNYPTID--EGWRGAMTLPRELTLEDGK---LYQTPVRELESLRKPEEAAHNTTLSGN 358
Query: 463 SVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSE 522
S + L G A +LD+ + + ++ MG
Sbjct: 359 SKLELPSGDAYELDLDLIWTDA-------------TSFGLELR-MGL------------- 391
Query: 523 LTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIV 582
+ + N D + S L + + + G K+ +RI VD+S V
Sbjct: 392 -NLVGYDVE------NETLTLDRSDSPLFTVQDGETR--ECFIENGAKVHLRIFVDNSSV 442
Query: 583 ESFGQGGRTVITSRIYPT 600
E F G V TSRI+PT
Sbjct: 443 EIFINDGEKVFTSRIFPT 460
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 9e-56
Identities = 142/503 (28%), Positives = 213/503 (42%), Gaps = 93/503 (18%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +FH QP+ +NDPNG +++KG YHLFYQ+ P V G +WGH S DL+HW +
Sbjct: 14 RPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGV 73
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA + +GQ+ ++YTG S Q LA D
Sbjct: 74 ALAPDDPYDSHGCYSGSA-VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH----- 127
Query: 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKT 292
+ G V+ P FRDP W +G W + IG++ + G L+Y++ D K
Sbjct: 128 -FEKFGIVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVIGAQTETEKGSILLYRSKDLKN 184
Query: 293 YELLDEYL-HAVPGTG----MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK- 346
+ + E L G MWEC D + ++G L S G L AS D +
Sbjct: 185 WTFVGEILGDGQNGLDDRGYMWECPDLFS--LDGQDVLLFSPQG------LDASGYDYQN 236
Query: 347 --VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWIN 403
+ Y +G + ++T + + DYG +YA ++F P RRI+ W+
Sbjct: 237 IYQNGYIVGQLDYEAPEFT---HGTEF---HELDYGFDFYAPQTFLAP-DGRRILVAWMG 289
Query: 404 ETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPG 462
+ + GWA T+PR + L D K +VQ P+ E+++LR E + V
Sbjct: 290 LPEIDYPTDRDGWAHCMTLPRELTLKDGK----LVQTPLRELKALRTE----EHINVFGD 341
Query: 463 SVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSE 522
L L+ E +L A E
Sbjct: 342 QEHTLPG-----LNGEFELILDLEKDSAFE------------------------------ 366
Query: 523 LTPIFFRSSNTTKGTNTYFCADET------RSSLAPDVFKQVHGSKVPVLQGEKLSMRIL 576
+ +N + T ADE RSS + + P+ +K+S+ I
Sbjct: 367 ---LGLALTNKGEETLLTIDADEGKVTLDRRSSGNLEDYGGTR--SCPLPNTKKVSLHIF 421
Query: 577 VDHSIVESFGQGGRTVITSRIYP 599
+D S VE F G V+TSRI+P
Sbjct: 422 IDKSSVEIFINDGEEVMTSRIFP 444
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|221256 pfam11837, DUF3357, Domain of unknown function (DUF3357) | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-31
Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPS 66
P Y PL P+ S G P R+P KG A+L+S +FLLSLVAL+I Q P
Sbjct: 1 LETLPYSYTPL-PDGDESAGGPPPRRRRPLKGLLAVLSSLLFLLSLVALLILNGQPPDGD 59
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMF 114
+ + P RGV+EGVS KSN L S+ WTNAM
Sbjct: 60 VVLVSSPETSPETAAPVSRGVSEGVSEKSNGALAGA-DASFPWTNAML 106
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 96 to 119 amino acids in length. Length = 106 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 6e-30
Identities = 72/311 (23%), Positives = 106/311 (34%), Gaps = 45/311 (14%)
Query: 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD----QWYD 186
DPN + Y G Y++F+ + + GN HA S DL++W P+A+V D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
G+W S + +G+ + YT + Q +A D + P V
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGG------PVL 110
Query: 246 PRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYL- 300
P + D FRDP DGKW L GS G +Y++ D T++ L
Sbjct: 111 PDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELL 169
Query: 301 -HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG-TYNPA 358
G E NG K+ L S++ T Y +
Sbjct: 170 ISEGEGGKQIEGPGLLK--KNG-------------KYYLFYSINGTGRVDSTYSIGYARS 214
Query: 359 NDKWTPDNPEEDVGIGLKWD-----YGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 413
P P+ D GL Y + +F D R ++ +D
Sbjct: 215 ESDTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAY-NVQYADAPT 272
Query: 414 KGWASVQTIPR 424
GW IPR
Sbjct: 273 YGWGRSLAIPR 283
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|219762 pfam08244, Glyco_hydro_32C, Glycosyl hydrolases family 32 C terminal | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 2e-17
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 502 IDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGS 561
+ SA FGLL+ A + SE T I + S D + S VFK+ GS
Sbjct: 1 FELSAASSFGLLLRASNDGSEQTLIGYDKSKGL------LTVDRSNSG--NGVFKEKFGS 52
Query: 562 KV---PVLQGEKLSMRILVDHSIVESFGQGG 589
V P+ + + LS+RI VD S VE F G
Sbjct: 53 GVRAAPLPEKDTLSLRIFVDRSSVEVFANDG 83
|
This domain corresponds to the C terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module. Length = 83 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 67/278 (24%), Positives = 93/278 (33%), Gaps = 36/278 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL---PIAMVPDQWYDINGVWTGSAT 196
G YHLFY P GN + A S+D W P+ P +D GVWT S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 197 ILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-----PPRHI 249
PDG M YTG +VQ LA D L+ W K+ NPV P
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGM 308
+RDP G WR+ G++ + G + + D + + G
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 309 WECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPE 368
+ V I+G L S K Y +GT + P P
Sbjct: 188 GQLEVPQVVKIDGRWYLLYSGRNEDAK------------TGYRVGT-----ALFGPGRPL 230
Query: 369 EDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETD 406
D YA++ D ++ G++ D
Sbjct: 231 TLAE---LLDRTDLYAARPVPDGEGGGVVLEGFVQFGD 265
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 3e-16
Identities = 63/293 (21%), Positives = 109/293 (37%), Gaps = 44/293 (15%)
Query: 136 PLFYKGWYHLFYQYNP--DSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN-GVWT 192
P + G +H+FY ++P W + DL+++ A+ D + + T
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 193 GSATILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG 250
GS I +G YTG K QV A D L+ W K P ++
Sbjct: 65 GSV-IKGEGTYHAFYTGHNLDGKPKQVVMHATSDD-----LITWTKDPEFILIADGEGYE 118
Query: 251 PKDFRDPTTAWAGPDGKWRLTIGS-----KIGKTGISLVYQTTDFKTYELLDEYLHAVPG 305
D+RDP W +G + + + + + G ++ + D K +E +E +A
Sbjct: 119 KNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWE-YEEPFYAPGL 177
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
M EC D + + +++ + + + HY + +P PD
Sbjct: 178 YFMPECPDLFKM--------------GDWWYLVYSEFSENRKTHYRVSK-SPFGPWRAPD 222
Query: 366 NPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWA 417
+ D GR +YA+K+ D RR ++GW+ DD W
Sbjct: 223 DDTFD---------GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWG 264
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 642 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.93 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.87 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.82 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.79 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.79 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.7 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.63 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.57 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.52 | |
| PF11837 | 106 | DUF3357: Domain of unknown function (DUF3357); Int | 99.48 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.47 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.45 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.41 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.3 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.28 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.22 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.19 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 99.19 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.18 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.18 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.17 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.15 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.96 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 98.93 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.81 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 98.76 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 98.74 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 98.71 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.57 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.56 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.55 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.53 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.51 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.5 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.49 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.47 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.46 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.39 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.38 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.31 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.27 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.21 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.19 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.14 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.14 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.09 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.9 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 97.83 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 97.75 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.75 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 97.65 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.58 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.48 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.48 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.45 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.45 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 97.39 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.33 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.32 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.22 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.08 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.05 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.05 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 96.63 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 96.49 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.28 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 95.86 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 95.8 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 94.97 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 94.35 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 90.11 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 86.54 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 85.22 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-124 Score=993.58 Aligned_cols=521 Identities=50% Similarity=0.882 Sum_probs=483.6
Q ss_pred CcccccccccceeeeecCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCC
Q 006523 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (642)
Q Consensus 109 ~~~~~~~w~Rp~yHf~P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~ 188 (642)
+++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 6777788999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred CeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCC--CCCCCCCCCCCEEEEeCCCC
Q 006523 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (642)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~~g 266 (642)
|||||||+++++|+.++||||...+..|+|++|++.|.+||.|+.|+|.++||++.++ .+++...||||+++|++++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999887789999999999999999999999999999988 78888999999999999999
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCC
Q 006523 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (642)
Q Consensus 267 ~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~ 346 (642)
+|+|++|++.+++|.+++|+|+||++|+..+.++|....+|||||||||||+.++.+|++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999999989999999999999
Q ss_pred ceEEEEEEecCCCCcccCCCCCcccccceeeccCcccceeeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccccccEEE
Q 006523 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (642)
Q Consensus 347 ~~~Y~iG~fd~~~~~f~p~~~~~D~g~~~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~GWag~ltlPRel 426 (642)
+++|+||+||+++.+|+|++...++..++|+|||+|||+|||+|..++|||+|||++||++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999889999999888877788999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCCCeEEEechHHHHhhhccceeeeeEEecCCceeecccccceeeeeeEEEEEE-ecCcC-----ccccccccc-C
Q 006523 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSG-----AMEEGYGCS-G 499 (642)
Q Consensus 427 ~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~~ldi~~~f~~~-l~~~~-----~~~~~~~~s-~ 499 (642)
+|++..|..|.|||++|++.||.......+..+++|+..+....++.|.|++++|++. |+... .++-.+.|. .
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~ 437 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTG 437 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccccccceeeecC
Confidence 9998678899999999999999988776677888999999999999999999999886 54321 112346684 6
Q ss_pred CcccccccCccEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccceeeeeccCCeEEEEEEEeC
Q 006523 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDH 579 (642)
Q Consensus 500 g~~~r~~~g~fGl~v~ad~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rss~~~~~~~~~~g~~~pvl~~e~~~LrI~VD~ 579 (642)
+...++.+||||++++++.+++|+|+++|++.|...+-.+.+|.|.+|||++.+..|..+|..++|...++++||+||||
T Consensus 438 ~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afvdv~~~~~islr~LiDh 517 (571)
T KOG0228|consen 438 GSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFVDVYPHQKISLRSLIDH 517 (571)
T ss_pred CcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEEEecCCCccchhhhhhh
Confidence 77788999999999999999999999999999876533788999999999999999998999999977899999999999
Q ss_pred CeEEEEEeCCceEEEEeeecCccccCccEEEEEecCCCceEEEEEEEeecccc
Q 006523 580 SIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSA 632 (642)
Q Consensus 580 S~vEvF~n~Gr~~~TsRvYP~~~~~~~~~i~lf~~~~~~~v~~~l~iw~m~s~ 632 (642)
||||.|+|+||+|+|+||||+.++..++.+|+||++.......++.+|+|+++
T Consensus 518 sivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 518 SIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred hhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 99999999999999999999999999999999999876644459999999876
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-97 Score=807.08 Aligned_cols=443 Identities=33% Similarity=0.643 Sum_probs=346.0
Q ss_pred cccceeeeecCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeE
Q 006523 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (642)
Q Consensus 116 w~Rp~yHf~P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (642)
-+||.|||+||.||||||||++|++|+|||||||||+++.||+||||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcEEEEEeccCC----CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEE
Q 006523 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (642)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~Mv 271 (642)
|+ .+|.+.+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+|. ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999974 25789999999995 689998789999988887 799999998896 78999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCCEEcccccccCCCCC-ceeeeceEEecccCccceeeccCCCCeEEEEeeecCCC----
Q 006523 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---- 345 (642)
Q Consensus 272 iGa~-~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~g-mWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~---- 345 (642)
+||+ .+.+|.++||+|+||++|++.++|..+....| ||||||||+|+.. ..+ .+|++..+.+..
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~--------~~~pqg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVL--------LFWPQGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cce--------EEcceeeecCCCcCCC
Confidence 9998 46789999999999999999999987644444 9999999999854 223 344444444332
Q ss_pred -CceEEEEEEecCCCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCC--CCCcCCCCccccc
Q 006523 346 -KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (642)
Q Consensus 346 -~~~~Y~iG~fd~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~--~~~~~~GWag~lt 421 (642)
....|++|+||++ +|...+.+ ..+||+| ||||+|||.++ ++|||++|||++|++. .|+...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 2357999999987 55554432 3589999 99999999996 7999999999999987 6677789999999
Q ss_pred ccEEEEEeeCCCCeEEEechHHHHhhhccceeeeeEEecCCceeecccccceeeeeeEEEEEEecCcCcccccccccCCc
Q 006523 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGA 501 (642)
Q Consensus 422 lPRel~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~~ldi~~~f~~~l~~~~~~~~~~~~s~g~ 501 (642)
|||||+|+ +| +|+|+|++||++||.....+..+.+......++ ....++++ ++++... |.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~~~l~~--~~~~~~~l----~~~~~~~--------~~--- 380 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGNSKLEL--PSGDAYEL----DLDLIWT--------DA--- 380 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccceeeec--cCCccEEE----EEEeecc--------cc---
Confidence 99999995 45 899999999999999966566666655432222 22333333 1111111 10
Q ss_pred ccccccCccEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCC-CCCCCccccccce--eeeeccCCeEEEEEEEe
Q 006523 502 IDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRS-SLAPDVFKQVHGS--KVPVLQGEKLSMRILVD 578 (642)
Q Consensus 502 ~~r~~~g~fGl~v~ad~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rs-s~~~~~~~~~~g~--~~pvl~~e~~~LrI~VD 578 (642)
..+|+.+..+.. .+.+... ...+++||++| ... ..++. .+++..+.+++||||||
T Consensus 381 ------~~~~~~l~~~~~-----~~~~~~~------~~~l~ldR~~s~~f~-----~~~~~~r~~~~~~~~~v~l~if~D 438 (486)
T COG1621 381 ------TSFGLELRMGLN-----LVGYDVE------NETLTLDRSDSPLFT-----VQDGETRECFIENGAKVHLRIFVD 438 (486)
T ss_pred ------ceEEEEeecCcc-----eeccccc------cceEEEecccccccc-----ccCCceeeeccCCCceEEEEEEEe
Confidence 126777765543 1222111 12488999887 211 11222 23333355689999999
Q ss_pred CCeEEEEEeCCceEEEEeeecCccccCccEEEEEecCCCceEEEEEEEeeccc
Q 006523 579 HSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNS 631 (642)
Q Consensus 579 ~S~vEvF~n~Gr~~~TsRvYP~~~~~~~~~i~lf~~~~~~~v~~~l~iw~m~s 631 (642)
+|+||||+|+|+.|+|+|+||... ..+|.|++.... ++...++|.+++
T Consensus 439 ~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g~--~~~~~~~~~l~~ 486 (486)
T COG1621 439 NSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQGV--AVVQNTIWPLKS 486 (486)
T ss_pred CCeEEEEEcCCceEEEEEecCCCc---ccceEEEccCce--EEEEeeeeccCC
Confidence 999999999999999999999976 345677664432 334558888864
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-89 Score=755.91 Aligned_cols=413 Identities=31% Similarity=0.554 Sum_probs=324.2
Q ss_pred cccceeeeecCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeE
Q 006523 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (642)
Q Consensus 116 w~Rp~yHf~P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSa 195 (642)
.+||+|||+|+.||||||||++|++|+|||||||+|.++.||+|+||||+|+|||||+++|+||.|+.+||..|||||||
T Consensus 12 ~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsa 91 (445)
T TIGR01322 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSA 91 (445)
T ss_pred CcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeE
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcEEEEEeccCC----CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEE
Q 006523 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (642)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~Mv 271 (642)
++ .+|+++|||||+.. ...+.||+|+|.|+ .+|+|+. +|||.+++.....+||||+| |. .+|+|||+
T Consensus 92 v~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~ 162 (445)
T TIGR01322 92 VD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMV 162 (445)
T ss_pred Ee-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEE
Confidence 85 79999999999753 23578999999985 6999984 59998755444578999999 54 47899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCCEEcccccccC----CCCC-ceeeeceEEecccCccceeeccCCCCeEEEEeeecCCC
Q 006523 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (642)
Q Consensus 272 iGa~~-~~~G~~~lY~S~Dl~~W~~~~~l~~~~----~~~g-mWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~ 345 (642)
+|++. +..|++++|+|+||++|++.+.+.... ...| ||||||||+|++ ||||..|....
T Consensus 163 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~ 227 (445)
T TIGR01322 163 IGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGL 227 (445)
T ss_pred EEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEecccc
Confidence 99874 456899999999999999999886542 2234 999999999962 56666654321
Q ss_pred ----------CceEEEEEEecCCCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCCCCCcCC
Q 006523 346 ----------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEK 414 (642)
Q Consensus 346 ----------~~~~Y~iG~fd~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~ 414 (642)
....|++|+||..+.+|++++. ..++|+| +|||+|||.++ ++||||||||++|+...++.+.
T Consensus 228 ~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~ 300 (445)
T TIGR01322 228 DASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRD 300 (445)
T ss_pred CcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccC
Confidence 1256999999987789987642 2479999 89999999996 7999999999999987777789
Q ss_pred CCcccccccEEEEEeeCCCCeEEEechHHHHhhhccceeeeeEEecCCceeecccccceeeeeeEEEEEEecCcCccccc
Q 006523 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEG 494 (642)
Q Consensus 415 GWag~ltlPRel~L~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~~ldi~~~f~~~l~~~~~~~~~ 494 (642)
||+|+|||||+|.|+ +| +|+|+||+||++||.+... .... .....+... ..+++|+++++. .
T Consensus 301 ~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~~-~~~~~~~~~-~~~~~l~~~~~~----~------ 362 (445)
T TIGR01322 301 GWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI---NVFG-DQEHTLPGL-NGEFELILDLEK----D------ 362 (445)
T ss_pred CcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc---cccc-cccccccCC-CceEEEEEEecC----C------
Confidence 999999999999995 56 8999999999999986532 0111 111111111 123444332211 0
Q ss_pred ccccCCcccccccCccEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccceeeeeccCCeEEEE
Q 006523 495 YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMR 574 (642)
Q Consensus 495 ~~~s~g~~~r~~~g~fGl~v~ad~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rss~~~~~~~~~~g~~~pvl~~e~~~Lr 574 (642)
. ...|||.+ .+ ..+.+.|.|+..++ .+++||++++...... .. ..+++..+++++||
T Consensus 363 ------~-----~~~~~l~~-~~--~~~~~~i~~~~~~~------~l~~dr~~~~~~~~~~-~~--~~~~~~~~~~~~l~ 419 (445)
T TIGR01322 363 ------S-----AFELGLAL-TN--KGEETLLTIDADEG------KVTLDRRSSGNLEDYG-GT--RSCPLPNTKKVSLH 419 (445)
T ss_pred ------C-----ccEEEEEE-eC--CCCeEEEEEECcCC------EEEEEccCCCCcCCcc-ce--EEEEcCCCCeEEEE
Confidence 0 12478877 44 24678888876643 4889998876321111 11 12344345789999
Q ss_pred EEEeCCeEEEEEeCCceEEEEeeecC
Q 006523 575 ILVDHSIVESFGQGGRTVITSRIYPT 600 (642)
Q Consensus 575 I~VD~S~vEvF~n~Gr~~~TsRvYP~ 600 (642)
||||+|+||||+|||+.|||+||||.
T Consensus 420 i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 420 IFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEEECCEEEEEECCCEEEEEEeccCC
Confidence 99999999999999999999999995
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-87 Score=735.74 Aligned_cols=422 Identities=51% Similarity=0.941 Sum_probs=324.9
Q ss_pred eeecCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCC
Q 006523 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (642)
Q Consensus 122 Hf~P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (642)
||+|+.||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 577
Q ss_pred cEEEEEeccCCC------ccceE-EEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEee
Q 006523 202 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (642)
Q Consensus 202 ~~~~~YTG~~~~------~~q~q-~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (642)
+++|||||+... ..+.| +.|.+.| +.+|+|+++||||.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 12333 4555555 38999998899999766666789999999875 44799999998
Q ss_pred e-cCCeeEEEEEEeCCCCCCEEccccccc-CCCC-CceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCCceEEE
Q 006523 275 K-IGKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (642)
Q Consensus 275 ~-~~~~G~~~lY~S~Dl~~W~~~~~l~~~-~~~~-gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~ 351 (642)
+ .+..|++++|+|+||++|++.+.++.. .... +||||||||+|++++ ...||||..|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 7 456799999999999999999998754 2333 599999999998543 24699999998876677999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCC-CCCcCCCCcccccccEEEEEe
Q 006523 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE-SDDLEKGWASVQTIPRTVLYD 429 (642)
Q Consensus 352 iG~fd~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~-~~~~~~GWag~ltlPRel~L~ 429 (642)
+|.|+++ .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++.. ...++.||+|+|||||||.|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999973 479987653 22334589999 9999999999755699999999999842 222338999999999999997
Q ss_pred eCCCCeEEEechHHHHhhhccceeeeeEEecCCceeeccc--ccceeeeeeEEEEEEecCcCcccccccccCCccccccc
Q 006523 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 507 (642)
Q Consensus 430 ~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~--~~~~~ldi~~~f~~~l~~~~~~~~~~~~s~g~~~r~~~ 507 (642)
.++| +|+|+||+||++||... ......+..+....+.. ..+.+++|+++|+.. . . + .
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~--~-----------~-~-----~ 360 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVD--S-----------G-G-----A 360 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeC--C-----------C-c-----c
Confidence 5566 79999999999999542 23333443332211111 123345555554331 0 0 0 1
Q ss_pred CccEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCC-ccccccceeeeeccCCeEEEEEEEeCCeEEEEE
Q 006523 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPD-VFKQVHGSKVPVLQGEKLSMRILVDHSIVESFG 586 (642)
Q Consensus 508 g~fGl~v~ad~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rss~~~~-~~~~~~g~~~pvl~~e~~~LrI~VD~S~vEvF~ 586 (642)
+.|||.++++++.++.+.|.|+..++ .+++||+++..... .........+++..+++++||||||+||||||+
T Consensus 361 ~~~~l~~~~~~~~~~~~~i~~~~~~~------~l~vdR~~~~~~~~~~~~~~~~~~~~~~~~~~~~lri~vD~ssvEvf~ 434 (437)
T smart00640 361 GPFGLLVLASEDLSEQTAVYFDVSKG------TLCLDRRSSGTSNDEVFKGVRGATVPVDPGETLSLRILVDHSSVEIFA 434 (437)
T ss_pred eeEEEEEEeCCCCCceEEEEEEcCCe------EEEEecCCCCCCcccccccceeeeeecCCCCeEEEEEEEeceEEEEEe
Confidence 25899999888877889999876543 48999976642111 111111112233345789999999999999999
Q ss_pred eCC
Q 006523 587 QGG 589 (642)
Q Consensus 587 n~G 589 (642)
|||
T Consensus 435 ndG 437 (437)
T smart00640 435 NGG 437 (437)
T ss_pred CCC
Confidence 997
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=632.22 Aligned_cols=299 Identities=42% Similarity=0.847 Sum_probs=249.4
Q ss_pred eeecCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCC
Q 006523 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (642)
Q Consensus 122 Hf~P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG 201 (642)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred cEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcC-CCceecC-CCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCe
Q 006523 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (642)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~-~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~ 279 (642)
+++|||||+.....|.|++|+|.|.+ .+|+|++ +||||.. |++ ...+||||+|+|. ++++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999996653 8999998 4999985 445 6799999999987 5699999999987788
Q ss_pred eEEEEEEeCCCCCCEEcccccccCC-CCCceeeeceEEecccCccceeeccCCCCeEEEEeeec----CCCCceEEEEEE
Q 006523 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (642)
Q Consensus 280 G~~~lY~S~Dl~~W~~~~~l~~~~~-~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~----~~~~~~~Y~iG~ 354 (642)
|++++|+|+||++|++.+.+..... ..+||||||||+|+..+.. +...+|||..|. ......+|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876443 3469999999999865210 224568999888 345678999999
Q ss_pred ecCCCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCCCC-CcCCCCcccccccEEEEEeeCC
Q 006523 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (642)
Q Consensus 355 fd~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~-~~~~GWag~ltlPRel~L~~~~ 432 (642)
||..+.+|+++.. ...++|+| +|||+|||.++.++||||||||+++++... ..+.||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877889987622 14689999 699999999985569999999999987532 23689999999999999974 3
Q ss_pred CCeEEEec
Q 006523 433 GSNVVQWP 440 (642)
Q Consensus 433 g~~L~q~P 440 (642)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 55899998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-67 Score=549.54 Aligned_cols=286 Identities=42% Similarity=0.798 Sum_probs=244.1
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (642)
||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988999999999999876559999999
Q ss_pred eccCC---CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCeeEEE
Q 006523 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (642)
Q Consensus 208 TG~~~---~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~~~ 283 (642)
||+.. ...+.|++|+|.|. +.+|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|++.
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45789999999853 389999988998863 3345679999999654 499999999874 4568899
Q ss_pred EEEeCCCCCCEEccccc-ccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCC------CceEEEEEEec
Q 006523 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (642)
Q Consensus 284 lY~S~Dl~~W~~~~~l~-~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~------~~~~Y~iG~fd 356 (642)
+|+|+||++|++.+.+. ......+|||||+||++++ +.||||..|.... ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998874 2222335999999999973 1378888887654 34689999999
Q ss_pred CCCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccccccEEEEEeeCCCCe
Q 006523 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (642)
Q Consensus 357 ~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~GWag~ltlPRel~L~~~~g~~ 435 (642)
+. +|+++.. ...++|+| +|||+|||.++ ++||||||||++++...+..+.||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 86 5555311 14589999 99999999997 79999999999999888888999999999999999974 33 8
Q ss_pred EEEechHH
Q 006523 436 VVQWPVEE 443 (642)
Q Consensus 436 L~q~Pv~E 443 (642)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-54 Score=447.29 Aligned_cols=266 Identities=23% Similarity=0.409 Sum_probs=219.4
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccceEEcCccCCC-CCccCCCCeEeeeEEEccCCcEEEEE
Q 006523 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (642)
Q Consensus 131 NDPnG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHA~S~DLvhW~~~p~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (642)
.||. ++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4887 999999999999999999988 8999999999999999999999988 5578899999999985 679999999
Q ss_pred eccCCC--ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CCee
Q 006523 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (642)
Q Consensus 208 TG~~~~--~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-----~~~G 280 (642)
||+... ..+.|++|+|.|+ .+|+|...+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998642 4678999999885 799999888998755566667899999976545799999999874 4578
Q ss_pred EEEEEEeCCCCCCEEcccccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC-CCceEEEEEEecCCC
Q 006523 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (642)
Q Consensus 281 ~~~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~-~~~~~Y~iG~fd~~~ 359 (642)
++.+|+|+||++|++.+.+... ....|||||++|+++ .+|||..|... .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~---------------g~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG---------------DWWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC---------------CEEEEEEEeccCCCcEEEEEeCCC--C
Confidence 9999999999999999876533 234599999999996 27888888653 234579999622 2
Q ss_pred CcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccccccEEEEEeeCCC
Q 006523 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (642)
Q Consensus 360 ~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~GWag~ltlPRel~L~~~~g 433 (642)
+.|..... ..+| | +|||+|||.|+ +||||||||++++.+.++.++||+|||| ||+|.+. ++|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~-~~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQN-EDG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEEC-CCC
Confidence 35543221 1478 7 89999999996 9999999999999888888999999999 6777776 366
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=319.65 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=190.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccceEEcCccC--CCCCccCCCCeEeeeEEEccCCcEEEEEe
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHA~S~DLvhW~~~p~AL--~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (642)
||+++. |+||||||++|.+..|+. ..||||+|+||+||++.+.+| .+...+|..|||+|+++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 566554 889999999999876554 568999999999999999887 56778899999999998755599999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCceeEEEcCCCcee-----cCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCee
Q 006523 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (642)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl-----~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G 280 (642)
|... ...+.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45688999999985 799998777764 222233456899999976533499999999864 3457
Q ss_pred EEEEEEeCCCCCCEEccccc--ccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC-CCceEEEEEEecC
Q 006523 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (642)
Q Consensus 281 ~~~lY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~-~~~~~Y~iG~fd~ 357 (642)
.+.+|+|+|+++|++.+.+. .......|||||++|+++ .+|+|..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88999999999999988762 222234599999999995 27888887654 4456799998875
Q ss_pred CCCcccCCCCCcccccceeeccC-cccceeeEecCCCCcEEEEEeccCC
Q 006523 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (642)
Q Consensus 358 ~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~ 405 (642)
. .|+|.. ...+|+| +|||+|++.+.+++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455532 1357888 8999999998657999999999986
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=298.27 Aligned_cols=268 Identities=26% Similarity=0.391 Sum_probs=203.6
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCC----CCCccCCCCeEeeeEEEccCCcEEEE
Q 006523 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (642)
Q Consensus 131 NDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (642)
|||+ +++++|+||||||++|.+ ++++|+|++|+||+||++++.++. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998874 67778889999999987555999999
Q ss_pred EeccCC-CccceEEEEEEcCCCCCCceeEEEcCCCceecC-CCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCeeEEE
Q 006523 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (642)
Q Consensus 207 YTG~~~-~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~~~ 283 (642)
||+... ...+.|++|+|+|+. ..|++...+||+.. +......++|||+|++ +++|+|||++++.. +..+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999853 246789999998863 45776655666643 2233456899999954 45699999998763 2356788
Q ss_pred EEEeCCCCCCEEcccc--cccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCC------CceEEEEEEe
Q 006523 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTY 355 (642)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~------~~~~Y~iG~f 355 (642)
+++|+|+.+|+..+.. .......+++|||++|+++ .+|+|..|.... ....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222334699999999985 268888776542 3446788765
Q ss_pred cCCCCcccCCCCCc-ccccceeeccC-cccceeeEecCCCCcEEEEEeccCCCCCCCCcCCCCcccccccEEE
Q 006523 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (642)
Q Consensus 356 d~~~~~f~p~~~~~-D~g~~~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~GWag~ltlPRel 426 (642)
+ .+.|++..... -.-.....|.+ .+||++.|.++ ++|++|++|+.+++.... .+.+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 3 34676543210 00011235666 79999999987 799999999998875433 568999999999986
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=232.52 Aligned_cols=192 Identities=22% Similarity=0.223 Sum_probs=137.6
Q ss_pred cCCccceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEE
Q 006523 131 NDPNGPLF-YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (642)
Q Consensus 131 NDPnG~~y-~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (642)
-|..|-+. ++|+.-+|+...|.. +.|+.+||||++|+||+||++.+. +.|+.++|.+|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 35666444 688533898877764 468899999999999999999654 668899999999999998766799999
Q ss_pred EEeccCC----CccceEEEEEEcCCCCCCceeEEEcC--CCceecCC--------------CCCCCCCCCCCEEEEeCCC
Q 006523 206 LYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPD 265 (642)
Q Consensus 206 ~YTG~~~----~~~q~q~lA~S~D~~d~ll~~w~K~~--~nPVl~~p--------------~g~~~~~fRDP~V~w~~~~ 265 (642)
||||+.+ .....|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+|+..+++
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999863 235778888765431 22333321 13444321 1123578999999543337
Q ss_pred CeEEEEEeeec-CC---------------------------eeEE--EEEEeCCCCCCEEcccccccCCCCCceeeeceE
Q 006523 266 GKWRLTIGSKI-GK---------------------------TGIS--LVYQTTDFKTYELLDEYLHAVPGTGMWECVDFY 315 (642)
Q Consensus 266 g~w~MviGa~~-~~---------------------------~G~~--~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf 315 (642)
|+|||+++++. .. .|+| ++++|+|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 99999999863 12 2554 445778999999999997653334579999999
Q ss_pred EecccCccceeeccCCCCeEEEEeee
Q 006523 316 PVAINGSVGLDTSATGPGIKHVLKAS 341 (642)
Q Consensus 316 ~l~~~g~~~l~~s~~g~~~k~vl~~s 341 (642)
+++ .||+|..|
T Consensus 244 ~~~---------------gk~yL~~s 254 (349)
T cd08997 244 FHN---------------GKYYLFTI 254 (349)
T ss_pred EEC---------------CEEEEEEe
Confidence 996 27888776
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.8e-21 Score=202.06 Aligned_cols=189 Identities=19% Similarity=0.262 Sum_probs=140.0
Q ss_pred eeeecCCCCccCCccceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-ceEEcCccCCCC--CccCCCCeEe
Q 006523 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (642)
Q Consensus 121 yHf~P~~gwmNDPnG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHA~S~DLv-hW~~~p~AL~Pd--~~~D~~Gv~S 192 (642)
.+|..+..++-+|. ++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 36778888899998 6665 5899999999887643 2 23569999999987 899988999887 4789999999
Q ss_pred eeEEEccCCcEEEEEeccCC-------CccceEEEEEEcCCCCCCceeEEEcCCCceecCC-C-----------------
Q 006523 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-R----------------- 247 (642)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p-~----------------- 247 (642)
++++. .+|+++|+||+... ...+.+++|.|.+. +..|++. .+|||.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 68999999999753 12456777877653 1356664 34444220 0
Q ss_pred -------------------------------------------CCCCCCCCCCEEEEeCCCCeEEEEEeeec----CCee
Q 006523 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (642)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~~g~w~MviGa~~----~~~G 280 (642)
.....++|||+| |+ .+|+|+|+++++. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 011245799999 66 5699999999874 2467
Q ss_pred EEEEEEeCCCCCCEEcccccc----c-CC----CCCceeeeceE-Eec
Q 006523 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (642)
Q Consensus 281 ~~~lY~S~Dl~~W~~~~~l~~----~-~~----~~gmWECPdlf-~l~ 318 (642)
.+.+|+|+|+++|++.+.+.. . .+ ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999987731 1 11 23599999999 664
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.7e-19 Score=184.22 Aligned_cols=185 Identities=21% Similarity=0.259 Sum_probs=135.7
Q ss_pred CcCccc-ccccccceeeeecCCCC----ccCCccceEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccceEEcCccC
Q 006523 107 YNWTNA-MFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAM 179 (642)
Q Consensus 107 ~~~~~~-~~~w~Rp~yHf~P~~gw----mNDPnG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHA~S~DLvhW~~~p~AL 179 (642)
+..|.. +..|+|...-+.+...| +.+|. +++++|+||||||++|..+ .++.++|+||+|+||++|++.+++.
T Consensus 51 ~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~ 129 (294)
T cd08984 51 VASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVD 129 (294)
T ss_pred EEEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccc
Confidence 334555 77787766433332222 34676 7889999999999998753 3457899999999999999988653
Q ss_pred CCCCccCCCCeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEE
Q 006523 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (642)
Q Consensus 180 ~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V 259 (642)
. +..++++++++.+.+|+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 130 ~-----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v 189 (294)
T cd08984 130 L-----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV 189 (294)
T ss_pred c-----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe
Confidence 2 245899999987667999999998643 345689999885 799985 455542 13479999
Q ss_pred EEeCCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCC---C-CCceeeeceEEec
Q 006523 260 AWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP---G-TGMWECVDFYPVA 318 (642)
Q Consensus 260 ~w~~~~g~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~---~-~gmWECPdlf~l~ 318 (642)
|+ .+|+|||+++. ..| +.+|+|+|+.+|++.+.++.... . ..+++||++++.+
T Consensus 190 -~k-~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 -FR-WKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred -eE-ECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 44 57999999854 234 66999999999999997765321 1 2378999999764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.6e-18 Score=176.21 Aligned_cols=161 Identities=19% Similarity=0.230 Sum_probs=122.3
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcC-ccCCC--CCccCCCCeEeeeEEEccCCcEEEEEe
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p-~AL~P--d~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (642)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+ +.|.| +..++..||++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 56 5889999999999987643 56899999999999999876 44556 6678889999999974 7999999999
Q ss_pred ccCC-CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec---CCeeEEEE
Q 006523 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI---GKTGISLV 284 (642)
Q Consensus 209 G~~~-~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~---~~~G~~~l 284 (642)
+... ...+.+++|.|+|+ .+|+|.. . ++. + ..||++++....+|+|+|++.... +..+.+.+
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~------~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I~l 142 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P------NNRDGILFPEKINGKYVMLHRPFEYGGTSPPDMWL 142 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C------CCCCEEEeeEEECCEEEEEEccccCCCCCCCcEEE
Confidence 9863 34577999999985 8999973 2 121 1 237888832225899999996432 34567899
Q ss_pred EEeCCCCCCEEcccccccCCCCCceeeec
Q 006523 285 YQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (642)
Q Consensus 285 Y~S~Dl~~W~~~~~l~~~~~~~gmWECPd 313 (642)
++|+||.+|+..+.++.. ..+.||+-.
T Consensus 143 A~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 143 SFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EECCCcCccCCCeEEecC--CCCceeece
Confidence 999999999987766543 223577644
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=175.90 Aligned_cols=192 Identities=15% Similarity=0.170 Sum_probs=138.0
Q ss_pred CCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCC-CccCCCCeEeeeEEEccCCcEEE
Q 006523 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (642)
Q Consensus 127 ~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd-~~~D~~Gv~SGSavv~~dG~~~~ 205 (642)
.||++||+ +++++|+||||++....+. ....|.+++|+||+||++++.+|.+. ..++..++|.++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899999 5788999999998765322 24679999999999999999988664 456778999999975 6899999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEE
Q 006523 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (642)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY 285 (642)
+||+. +.+++|+|+|+. ..|++..++|++.+.. .....+||.|+ .+++|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998753 4688755678876432 23578999995 45789999999863 1222234
Q ss_pred EeCCCCCCEEcccccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCCceEEEEE
Q 006523 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (642)
Q Consensus 286 ~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~iG 353 (642)
-|+|+.+|+.....+ ......+.|||.+|+.+ .+++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~---------------G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGS-EITPKNYFEGPFMFKRN---------------GIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceee-eccCCCceecceEEEEC---------------CEEEEEEECCCCCCCCceEE
Confidence 578898887543332 11223489999999975 26777777654332234444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=158.35 Aligned_cols=186 Identities=19% Similarity=0.155 Sum_probs=129.7
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCc-cCCCCeEeeeEEEccCCcEEEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D~~Gv~SGSavv~~dG~~~~~ 206 (642)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 3567998 77889999999986432 57999999999999999988876554 4566789888864 68999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCee---EE
Q 006523 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (642)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G---~~ 282 (642)
|++.... ..+.+++|+|+|.. ..|++....++. .+. .....+||.|++ +++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~-~~~--~~~~~~Dp~v~~-d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLC-CPE--GEGGAIDPSFFT-DTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEe-cCC--CCCCccCCCeEE-CCCCCEEEEEeccCCCCCCCceE
Confidence 9998642 34567788887652 478886433443 222 235679999954 468999999987532111 13
Q ss_pred EEE-EeCCCCCCEEccc-ccccCC--CCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC
Q 006523 283 LVY-QTTDFKTYELLDE-YLHAVP--GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 283 ~lY-~S~Dl~~W~~~~~-l~~~~~--~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~ 344 (642)
.+. -|+|+.+|..... ++.... ...++|||.+|+.+ .+++|..|...
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~~S~~~ 200 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG---------------GYYYLFYSAGG 200 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC---------------CEEEEEEEcCC
Confidence 233 3689988864332 222111 23489999999984 26888887654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=149.99 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=137.1
Q ss_pred CCccceEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccceEEcCccCCCCC--ccCCCCeEeeeEEEccCCcEEEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHA~S~DLvhW~~~p~AL~Pd~--~~D~~Gv~SGSavv~~dG~~~~~ 206 (642)
||. +++++|+|++|.......+. +....|..+.|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 887 77789999999987654432 2234589999999999999998886543 36788999999874 79999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEE
Q 006523 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (642)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~ 286 (642)
||+......+.+++|+|+|.. ..|++....|++...+ ......||.+++ +++|++||++++. .++.+.--
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVFI-DDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEEE-CCCCCEEEEECCc---CCEEEEEe
Confidence 999754335667899997752 4698875556654221 235678999954 5689999999864 23444556
Q ss_pred eCCCCCCEEccccccc-----CCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCCceEEEEE
Q 006523 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (642)
Q Consensus 287 S~Dl~~W~~~~~l~~~-----~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~iG 353 (642)
|+|+.+|+.....+.. ....+..|+|.+|+.+ .+++|..|.+......|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 8899999754433321 1123468999999875 26778777654333345543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-13 Score=139.95 Aligned_cols=191 Identities=23% Similarity=0.191 Sum_probs=127.8
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCC----CCCccCCCCeEeeeEEEccCCcEEEEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (642)
||. ++.++|+|+||+..... ....++.++|+||++|+..+.++. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 887 78889999999987642 234588999999999999998774 44456678999999975 689999999
Q ss_pred eccCC-CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecC--CeeEEEE
Q 006523 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (642)
Q Consensus 208 TG~~~-~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~--~~G~~~l 284 (642)
++... ...+.+++|+|+|+ ..|.+....+ .+. ......+||.|++ +++|++||+.+.... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PPT-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cCc-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99753 23467889999875 4554432111 111 1234679999954 566999999987532 2455777
Q ss_pred EEeCCCCCCEEcccc-c-ccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCCceEEEEE
Q 006523 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (642)
Q Consensus 285 Y~S~Dl~~W~~~~~l-~-~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~iG 353 (642)
.++++...|...... . .......+.|||.+|+.. .+++|..|........|.++
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEE
Confidence 887765444321111 1 111233489999999975 26777777654322234444
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.7e-13 Score=138.19 Aligned_cols=180 Identities=17% Similarity=0.106 Sum_probs=123.8
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCC-ccCCCCeEeeeEEEccCCcEEEEEecc
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (642)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 888 88889999999876542 13478999999999999998876654 36778999999874 689999999998
Q ss_pred CCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCC---eeEEEEEE
Q 006523 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (642)
Q Consensus 211 ~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~---~G~~~lY~ 286 (642)
... ..+.+++|+|+|+. ..|++....++ .. ....+||.+++ +++|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~-----~~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF-----EPKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC-----CCcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778899998752 46777532333 21 13567999954 4679999999864221 24444456
Q ss_pred eCCCCCCEEccc--c--ccc--------------CCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC
Q 006523 287 TTDFKTYELLDE--Y--LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 287 S~Dl~~W~~~~~--l--~~~--------------~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~ 344 (642)
+.|+.+|.-... . ... .....+-|+|.+++.+ .+++|..|...
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~ 204 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN---------------GRYYLTYSANH 204 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC---------------CEEEEEEECCC
Confidence 788877752111 0 000 0112378999999885 26777777544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-15 Score=134.24 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH-HhcCCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 006523 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (642)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (642)
|+|||+...+... ++.++||++|.+++|+++++||++||+++ +++++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999965543331 24567888899999999999999999998 333221 11111 122344455556689999999
Q ss_pred ccccccccccccccCCCcCccccc
Q 006523 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (642)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (642)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999997
|
; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=139.95 Aligned_cols=171 Identities=21% Similarity=0.261 Sum_probs=120.4
Q ss_pred cceeeeecCCCC-ccCCccceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccceEEcCccCCCC-
Q 006523 118 RTSFHFQPEKNW-MNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPD- 182 (642)
Q Consensus 118 Rp~yHf~P~~gw-mNDPnG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHA~S~DLvhW~~~p~AL~Pd- 182 (642)
.|..=+.+..+. ..||..+++.+|+|||||++... .+ .|.....+||+|+||+||+..+.+|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 344444444444 36998899999999999997532 11 2445778999999999999999888653
Q ss_pred -CccCCCCeEeeeEEEccCCcEEEEEeccCCC----ccceEEEEEEcCCCCCCceeEEEcCCCceecCCC----------
Q 006523 183 -QWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---------- 247 (642)
Q Consensus 183 -~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~---------- 247 (642)
..||..++|..+++ ..+|+++|+|++.... ..+.+++|+|+++. ..|++. .+||+.+..
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 35899999999986 5799999999975321 23567999998752 359985 689986521
Q ss_pred --------CCCCCCCCCCEEEEeCCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CCEEc
Q 006523 248 --------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (642)
Q Consensus 248 --------g~~~~~fRDP~V~w~~~~g~w~MviGa~~~--------~~G~~~lY~S~Dl~-~W~~~ 296 (642)
.++...+.||.|+ + .+|+|||++.+... ..-++-|..|+++. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1334457899985 3 58999999965321 11246677788764 46543
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.8e-12 Score=131.92 Aligned_cols=129 Identities=22% Similarity=0.249 Sum_probs=98.7
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCC-------ccCCCCeEeeeEEEccCCc
Q 006523 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (642)
Q Consensus 130 mNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-------~~D~~Gv~SGSavv~~dG~ 202 (642)
+.||. +++++|+|+||+... .+++++|+||+||++.+.++.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 36997 889999999999864 589999999999999998776542 23567899999874 6999
Q ss_pred EEEEEeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 006523 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
++|+||+.... ..+.+++|+|+|.. ...|++. +||+...++......+||.++. +++|++||++++.
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~ 137 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSF 137 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeec
Confidence 99999987543 34567889998750 1479875 5888754332335678999954 4689999999864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-11 Score=130.81 Aligned_cols=169 Identities=17% Similarity=0.216 Sum_probs=118.4
Q ss_pred ccCCccceEE--CCEEEEEEee-CC---CC-CCCC-CcEEEEEEecC-ccceEEcCccCCCCCccCCCCeEeeeEEEccC
Q 006523 130 MNDPNGPLFY--KGWYHLFYQY-NP---DS-AVWG-NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (642)
Q Consensus 130 mNDPnG~~y~--~G~YHLFYQ~-nP---~~-~~wG-~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~d 200 (642)
.-||. ++++ +|+|||||.- .. .. ..|. ...+|+|+|+| |+||+.++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 67998 8887 7899999942 11 11 1233 25799999999 99999988766664455667799999974 69
Q ss_pred CcEEEEEeccCC-----CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 006523 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 201 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
|+++|||+.... ......++|+|+|. .+|++.+ ++..+ .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12346788999873 7899863 33211 1345799995 44679999999643
Q ss_pred cCCeeEEEEEEeCCCCCCEEcccccccCCCCCceeeeceEEec
Q 006523 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (642)
Q Consensus 276 ~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 318 (642)
. ....+.+..|+|+.+|+..+.++.. ..-|+|.+|+..
T Consensus 156 ~-~~~~~~~a~s~D~~~w~~~~~~i~~----~~~EgP~v~k~~ 193 (294)
T cd08984 156 R-RGSTTYAADSEDLYHWTVEGPVLGD----RPHEGPNVFRWK 193 (294)
T ss_pred C-CCeEEEEEECCCCCEEEeCCccccC----CCCCCCCeeEEC
Confidence 2 2223567789999999986655421 124889998874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-10 Score=116.14 Aligned_cols=197 Identities=18% Similarity=0.091 Sum_probs=130.0
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCC----ccCCCCeEeeeEEEcc-CCcEEEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~----~~D~~Gv~SGSavv~~-dG~~~~~ 206 (642)
||. +++++|+|++|-.....+..+ ...|-..+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~~-i~~~~~~yY~ygs~~~~~~~~-~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GGG-ILKVGGTYYWYGENKGGGDTA-FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cCc-eEEECCEEEEEEEecCCCCcc-cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 443 788899999998775432111 24578889999999999998887653 4456679999997643 6999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEE
Q 006523 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (642)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY 285 (642)
|++.... ....+++|+|++.. ..|+... .+. +.+ ...|||.|++ +++|++||++++..+ ..+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~--~~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDN--SDLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCC--CceEEE
Confidence 9987432 34578899997653 4577642 221 222 4579999965 578999999987532 224445
Q ss_pred E-eCCCCCCEEcccccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC---CCceEEEEEEecCCCCc
Q 006523 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (642)
Q Consensus 286 ~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~---~~~~~Y~iG~fd~~~~~ 361 (642)
+ ++|+..+.- .... .......|||.+|+.+ .+++|..|... .....|++.+ +. .+.
T Consensus 149 ~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~-s~-~GP 208 (265)
T cd08985 149 RLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT-SI-LGP 208 (265)
T ss_pred EeCCCcccccc--eEEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec-CC-CCC
Confidence 4 367777753 2211 1122478999999985 26888777542 1234677664 22 345
Q ss_pred ccC
Q 006523 362 WTP 364 (642)
Q Consensus 362 f~p 364 (642)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.6e-11 Score=121.70 Aligned_cols=158 Identities=20% Similarity=0.246 Sum_probs=108.2
Q ss_pred CcCcccccccccceeee--ecC----CCCccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccC
Q 006523 107 YNWTNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179 (642)
Q Consensus 107 ~~~~~~~~~w~Rp~yHf--~P~----~gwmNDPnG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL 179 (642)
+..|..+..|+|..--+ .|. .+.+-||. +++.+ |+|||||+.+... ......+++|+|+|+++|+..+..+
T Consensus 37 ~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~ 114 (276)
T cd08979 37 AASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNP 114 (276)
T ss_pred EEEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCc
Confidence 34455566676655333 222 23456787 66667 9999999976532 2335789999999999999877544
Q ss_pred C-------CCCccCCCCeEeeeEEEccC-CcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCC
Q 006523 180 V-------PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251 (642)
Q Consensus 180 ~-------Pd~~~D~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~ 251 (642)
. +...++...+.++.++.+++ |+++|+|++........+.+|.|.|+ .+|++....+.+ ..+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~ 187 (276)
T cd08979 115 VPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDD 187 (276)
T ss_pred ceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccC
Confidence 2 22334556788999876544 89999999876544567889999885 899987533312 222234
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeee
Q 006523 252 KDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
..+.+|.++ + .+|+|+|++.+.
T Consensus 188 ~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 188 GQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CcCccceEE-E-ECCEEEEEEEec
Confidence 578899994 3 569999999865
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-11 Score=125.95 Aligned_cols=159 Identities=23% Similarity=0.248 Sum_probs=109.5
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccceEEcC-ccCCCCCccCCCCeEeeeEEEccCCcEEEEEeccC
Q 006523 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (642)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (642)
|++.++|. |||+|...-. ..+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+..
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 35556665 8888865422 2223479999999999999876 789999999999999999975 6899999999987
Q ss_pred CCccceEEEEEEcCCCCCCceeEEEcCCCceecCCC---CCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeC
Q 006523 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (642)
Q Consensus 212 ~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~ 288 (642)
.. ...+++|.|+|. .+|+|++ +++.+.. ......-+|-..|-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~-~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GK-GPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SS-SEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CC-CcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 54 356899999995 8999984 3222111 00011225555532346899999987 3457788999
Q ss_pred CCCCCEEccc-ccccCCCCCceee
Q 006523 289 DFKTYELLDE-YLHAVPGTGMWEC 311 (642)
Q Consensus 289 Dl~~W~~~~~-l~~~~~~~gmWEC 311 (642)
|+++|+.... +.. ...++||+
T Consensus 180 Dl~~W~~~~~~~~~--~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS--PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB----STTSSCS
T ss_pred Cccccccccccccc--CCCCcChh
Confidence 9999987655 332 23357887
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-09 Score=112.83 Aligned_cols=183 Identities=19% Similarity=0.164 Sum_probs=124.1
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCc--cCCCCe-EeeeEEEccCCcEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--YDINGV-WTGSATILPDGQIV 204 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~D~~Gv-~SGSavv~~dG~~~ 204 (642)
+..-||. ++.++|.|+||+...... ..+..++|+||+||+..+.++.+... +...+. |.++++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5667998 888999999999876543 34889999999999999877665443 223333 999986 5799999
Q ss_pred EEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCC--eeEE
Q 006523 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (642)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~--~G~~ 282 (642)
|+|+.........+.+|++++.. ..|+... ...+. .....||.+++ +++|++||+++..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998753 5788753 22222 24568999965 4679999999876432 2344
Q ss_pred EEEE-eCCCCCCEEcc-ccc-ccC--CCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCC
Q 006523 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 283 ~lY~-S~Dl~~W~~~~-~l~-~~~--~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~ 344 (642)
.+.+ ++|...+.... ... ... ...+.-|+|-+|+.+ .+++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~---------------g~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG---------------GKYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET---------------TEEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcC---------------CCEEEEEeccC
Confidence 4554 46776666544 222 221 133578999999985 26777777544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-10 Score=99.57 Aligned_cols=74 Identities=32% Similarity=0.467 Sum_probs=54.3
Q ss_pred CccEEEEEEcCCCCceEEEEEEeccCCCCCeeEEEeecCCCCCCCCccccccce---eeeecc-CCeEEEEEEEeCCeEE
Q 006523 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGS---KVPVLQ-GEKLSMRILVDHSIVE 583 (642)
Q Consensus 508 g~fGl~v~ad~~~~e~t~v~f~~~~~~~g~~~~~~~Dr~rss~~~~~~~~~~g~---~~pvl~-~e~~~LrI~VD~S~vE 583 (642)
++|||.|+++.+.+|.|.|+|+...+ .+++||++|+... ....++. ..++.. ++.++||||||+|+||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~~------~l~vDR~~s~~~~--~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPANG------TLTVDRTNSGIND--FSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTTT------EEEEEETTSSTTS--CCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECCCC------EEEEeCCCCcccc--cccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 35899999888889999999975543 4999999998321 1122222 123322 3567999999999999
Q ss_pred EEEeCC
Q 006523 584 SFGQGG 589 (642)
Q Consensus 584 vF~n~G 589 (642)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999997
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-09 Score=113.58 Aligned_cols=178 Identities=20% Similarity=0.164 Sum_probs=115.0
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCc--c----CCCCeEeeeEEEccCC
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~--~----D~~Gv~SGSavv~~dG 201 (642)
+.+-||. ++.++|.|++|...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677998 88889999998532211 134789999999999999887754321 1 346799999975 699
Q ss_pred cEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecC----
Q 006523 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (642)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~---- 277 (642)
+++|+|++........+.+|.+++.. ..|+. |++.. ...+||.+++ +++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998753333456788887653 34652 33321 1568999965 478999999886421
Q ss_pred -CeeEEEEEEeCCCCCCEEccccc--ccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecC
Q 006523 278 -KTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (642)
Q Consensus 278 -~~G~~~lY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~ 343 (642)
..+.+.+.+. |...|+..+... ........-|+|.+|+.+ .+++|..|..
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~---------------g~YYl~ys~~ 196 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD---------------GWYYLLIAEG 196 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC---------------CEEEEEEecC
Confidence 1233444433 334455443321 111112367999999874 2677777643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.9e-09 Score=111.45 Aligned_cols=170 Identities=14% Similarity=0.118 Sum_probs=112.7
Q ss_pred CCccCCccceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEcc-CCcE
Q 006523 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQI 203 (642)
Q Consensus 128 gwmNDPnG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~-dG~~ 203 (642)
+-+.||. ++++ +|+||||+.-.-....+ +.....+++|+||+||+....++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4467998 7776 89999999865322222 346789999999999998886642211 24578999988654 7999
Q ss_pred EEEEeccCCC---ccceEEE--EEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 006523 204 VMLYTGSTDK---SVQVQNL--AYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (642)
Q Consensus 204 ~~~YTG~~~~---~~q~q~l--A~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~ 278 (642)
+|+|+..... ....+++ +.+.| +.+|++. .|++.+ + ....|+.++ + .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~~--~---~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWIDL--G---ANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeecC--C---CCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999987542 1222333 33334 3688753 466542 2 356899985 3 35999999865322
Q ss_pred eeEEEEEEeCCCC-CCEEcccccccCCCCCceeeeceEEec
Q 006523 279 TGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVA 318 (642)
Q Consensus 279 ~G~~~lY~S~Dl~-~W~~~~~l~~~~~~~gmWECPdlf~l~ 318 (642)
..+.+.+|++|. .|+...... ......-|-|.+|+..
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~ 195 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLN 195 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEEC
Confidence 346677899876 676554321 1112367999999986
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-09 Score=115.36 Aligned_cols=186 Identities=13% Similarity=0.209 Sum_probs=121.4
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccceEEcCccCCC--CCccCCCCeEeeeEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVP--DQWYDINGVWTGSAT 196 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHA~S~DLvhW~~~p~AL~P--d~~~D~~Gv~SGSav 196 (642)
.+.-||. ++.++|+|+||....-... .+....+-..+|+||+||+.++.++.| ...|. .++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4668998 6788999999987643221 122245778899999999999988863 22443 478999987
Q ss_pred EccC----CcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCC-CCCCCCC-CCCCEEEEeCCCCeEEE
Q 006523 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (642)
Q Consensus 197 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p-~g~~~~~-fRDP~V~w~~~~g~w~M 270 (642)
. .+ |+++|+|+.. ...+++|+|++.. -.|+...+.|++... ++..... -.||.+|+ +++|++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 4 56 9999999864 2347899987653 479876557877532 2322122 37999965 57899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCCEEcccccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeeecC
Q 006523 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (642)
Q Consensus 271 viGa~~~-----~~G~~~lY~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~ 343 (642)
++|+... ..+.+.+.+ ++|+..- .++... ....+.+|.|.+|+.+ .+++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~---------------G~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN---------------GTYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC---------------CEEEEEEeCC
Confidence 9985321 112344444 3466543 232211 1112479999999874 2677776643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-09 Score=116.29 Aligned_cols=189 Identities=19% Similarity=0.231 Sum_probs=122.0
Q ss_pred cccccccccceeeeec-CCC-C----ccCCccceEECCEEEEEEeeCCCC-CCCCCcEEEEEEecCcc-ceEEcC-ccCC
Q 006523 110 TNAMFTWQRTSFHFQP-EKN-W----MNDPNGPLFYKGWYHLFYQYNPDS-AVWGNITWGHAVSADLI-HWLYLP-IAMV 180 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P-~~g-w----mNDPnG~~y~~G~YHLFYQ~nP~~-~~wG~~~WGHA~S~DLv-hW~~~p-~AL~ 180 (642)
|..+..|+|-..=|.+ +.+ | +.-|. +++++|+|||||+..-.. ..-...+.|.|+|.+.. .|+++. +.|.
T Consensus 86 S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~ 164 (349)
T cd08992 86 SKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILS 164 (349)
T ss_pred CCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEec
Confidence 4445678776632322 122 3 33465 778899999999953211 11123568899988876 598665 4455
Q ss_pred CCC------------------ccCCCCeEeeeEEEccCCcEEEEEeccCC-------CccceEEEEEEcCCCCCCceeEE
Q 006523 181 PDQ------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWV 235 (642)
Q Consensus 181 Pd~------------------~~D~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~d~ll~~w~ 235 (642)
|+. .||..+|...+++ ..+|+++|||+|+.. ...+.+++|+|+++- --|+
T Consensus 165 p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~ 239 (349)
T cd08992 165 PSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYV 239 (349)
T ss_pred CCcCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCE
Confidence 542 3677778777765 579999999999752 134678999998864 4699
Q ss_pred EcCCCceecCCCCCCCCCCCCCEEEEeCCCCeE-EEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCceeeece
Q 006523 236 KYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDF 314 (642)
Q Consensus 236 K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w-~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdl 314 (642)
|.+.|||+.. .+ ..+| |+ ..+.+ .|+..-. .+.|. +..|+|.++|+....+.......|..+|||-
T Consensus 240 r~~~nPi~~~------~~--~~~~-~~-~~~~~~~~~~~d~-~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~ 306 (349)
T cd08992 240 KSPYNPITNS------GH--ETCV-WQ-YKGGIAAMLTTDG-PEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDA 306 (349)
T ss_pred eCCCCcccCC------CC--ceEE-Ee-cCCceEEEEeccC-CCCce--EEeCCCCccEEEeeeccCCCccccCccCccc
Confidence 9988999852 12 2377 97 45566 5554332 22344 5679999999987766433223456677776
Q ss_pred EEe
Q 006523 315 YPV 317 (642)
Q Consensus 315 f~l 317 (642)
+.-
T Consensus 307 ~~~ 309 (349)
T cd08992 307 DED 309 (349)
T ss_pred ccC
Confidence 543
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-08 Score=103.68 Aligned_cols=135 Identities=19% Similarity=0.151 Sum_probs=94.0
Q ss_pred CCccCCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCC-ccCCCCeEeeeEEEccCCcEE
Q 006523 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (642)
Q Consensus 128 gwmNDPnG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~ 204 (642)
.++-||. ++++ +|+|+||..............+.+.+|+||+||+..+.++.+.. .+...++|...+. ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578998 7777 99999999765322101123578999999999999998886533 3445689999986 5799999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEee
Q 006523 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (642)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (642)
|+|+..... ....+.+|++++.. -.|+.....|+... .....||.++ .+++|++||+++.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCceE-EcCCCCEEEEEEe
Confidence 999876432 22345788887642 46877544454321 1235799985 4578999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.3e-08 Score=100.87 Aligned_cols=129 Identities=20% Similarity=0.262 Sum_probs=89.5
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCcc-------CCCCeEeeeEEEccCCcEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQIV 204 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~-------D~~Gv~SGSavv~~dG~~~ 204 (642)
||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|...++ ..+|+++
T Consensus 2 DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 70 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIY-QHNGKFY 70 (279)
T ss_pred CCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEE-EECCEEE
Confidence 898 777889999987631 36789999999999998887543322 24689999986 4689999
Q ss_pred EEEeccCCC-ccceEEEEEEcCCCCCCc-eeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 006523 205 MLYTGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~d~ll-~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
|+|++.... ....+++|++++...|.- ..|++ ..+++..... ....-.||.+++ ++||++||+.|+.
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~ 139 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSF 139 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEeccc
Confidence 999987532 245678999987643310 11443 2566653211 113457999965 5789999999863
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.1e-07 Score=95.70 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=88.0
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCcc------CCCCeEeeeEEEccCC
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~------D~~Gv~SGSavv~~dG 201 (642)
+..-||. ++.++|.|+||+...... ......+|+||+||+..+.++...... ...++|...++ ..+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~~-----~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEWF-----PGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECccccC-----CCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 4567998 888999999998642211 125678999999999988776432111 24579999986 5799
Q ss_pred cEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEee
Q 006523 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (642)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (642)
+++|+|+.........+.+|++++.. -.|+. |+... ..-.||.+++ +++|+.||+.|.
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998754334567889887653 24653 44322 1347999955 579999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.7e-08 Score=101.45 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=75.2
Q ss_pred eeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCC--CCCCCCCCCCCEEEEeCCCCeEEE
Q 006523 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRL 270 (642)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~~g~w~M 270 (642)
..++ ..+|+++|+|++........+++|.|.|+ ++|++.+ +|+|.++ ...+...++||.|+ + .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 3454 47999999999876555678999999995 8999975 5655442 23456788999995 3 5889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCCEEcccc
Q 006523 271 TIGSKI--GKTGISLVYQTTDFKTYELLDEY 299 (642)
Q Consensus 271 viGa~~--~~~G~~~lY~S~Dl~~W~~~~~l 299 (642)
++++.. .....+.+++|+|+.+|+..+..
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998864 34457889999999999998654
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-07 Score=94.78 Aligned_cols=187 Identities=14% Similarity=0.102 Sum_probs=112.9
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCcc--CCCCC-ccCCCCeEeeeEEEccCCcEEEEEe
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA--MVPDQ-WYDINGVWTGSATILPDGQIVMLYT 208 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~A--L~Pd~-~~D~~Gv~SGSavv~~dG~~~~~YT 208 (642)
||. ++.+++.|+||+.-.. .....++|+||+||+..... +.+.. .....++|...+. ..+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 897 7788889999987431 34789999999999876532 22322 1345689999986 47999999999
Q ss_pred ccCC--CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecC---CeeEEE
Q 006523 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (642)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~---~~G~~~ 283 (642)
.... ...+.+++|.+++..++. ..|+.. .+++... + ..-.||.++ .+ +|++||+++.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~~-Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPPT-GPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCCC-CCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8754 234566778877532233 579874 3443211 1 233699995 43 5999999875421 122344
Q ss_pred EEEeCCCCCCEEcccc--cccCC------CCCceeeeceEEecccCccceeeccCCCCeEEEEeeecCCCCceEEEEE
Q 006523 284 VYQTTDFKTYELLDEY--LHAVP------GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (642)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~------~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~~~~~Y~iG 353 (642)
+.+.++...+. ++. +.... +.+.-|-|.+++.+ .+++|..|........|.+|
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEE
Confidence 45555433332 221 11110 01245777777764 25777777554433445655
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.5e-07 Score=93.83 Aligned_cols=159 Identities=17% Similarity=0.133 Sum_probs=101.2
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCc-----------cCCCCeEeeeEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-----------~D~~Gv~SGSav 196 (642)
++.-||. +++++|+|++|....-. ...+...+|+||+||+..+.++..... --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557998 77889999999864211 113567889999999998876643211 013579999986
Q ss_pred EccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 006523 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (642)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~ 276 (642)
. .+|+++|+|+... ..+.+|++++.. -.|+.. .++. ...||.+++ +++|+.||+.+..
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceEE-cCCCCEEEEeCCC-
Confidence 4 6999999999862 346788887642 356543 1211 347999965 5789999998753
Q ss_pred CCeeEEEEEE-eCCCCCCEEcc-cccccCC-CCCceeeeceEEec
Q 006523 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVA 318 (642)
Q Consensus 277 ~~~G~~~lY~-S~Dl~~W~~~~-~l~~~~~-~~gmWECPdlf~l~ 318 (642)
+ +.+.+ +.|+....-.. .++.... ..+.-|-|.+++-+
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~ 181 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN 181 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC
Confidence 2 22333 56766552111 1222111 12357899888753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=91.32 Aligned_cols=152 Identities=18% Similarity=0.154 Sum_probs=98.0
Q ss_pred cccccccccceeeeecCCCC-----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcC--ccCCCC
Q 006523 110 TNAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMVPD 182 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gw-----mNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p--~AL~Pd 182 (642)
|..+..|++...-+.|+.++ +-.|+ +++.+|+|||||.-+... .......++|+|+|+++|+..+ +.+.+.
T Consensus 37 S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~ 114 (280)
T cd08995 37 TKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADG 114 (280)
T ss_pred ccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCc
Confidence 45567787766666664332 22343 566789999999865322 1124568999999999999865 233323
Q ss_pred CccCCCCeEeeeEEEcc-CCcEEEEEeccCC----CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCC
Q 006523 183 QWYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP 257 (642)
Q Consensus 183 ~~~D~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP 257 (642)
..++...+-...++.++ +|+++|+|.+... .....+.++.|.|. .+|+.. .+++.+..+ ..+--|
T Consensus 115 ~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~~---~~~E~P 184 (280)
T cd08995 115 EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGLY---FMPECP 184 (280)
T ss_pred cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCCc---ceeecc
Confidence 34444455567776543 5999999987542 22345667888874 799876 455543211 235568
Q ss_pred EEEEeCCCCeEEEEEeee
Q 006523 258 TTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 258 ~V~w~~~~g~w~MviGa~ 275 (642)
.+ ++ .+|+|+|+++..
T Consensus 185 ~l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 185 DL-FK-MGDWWYLVYSEF 200 (280)
T ss_pred eE-EE-ECCEEEEEEEec
Confidence 87 44 679999999865
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.8e-07 Score=94.82 Aligned_cols=123 Identities=24% Similarity=0.314 Sum_probs=86.8
Q ss_pred CCccceEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccceEEc-CccCCCCC-ccCCCCeEeeeEEEccCCcEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLYL-PIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~D-LvhW~~~-p~AL~Pd~-~~D~~Gv~SGSavv~~dG~~~ 204 (642)
+|. +++++|+|||||..+... ...++...|+|+|+| +-+|+.+ .++|.|.. .||..+++.++++..++|+++
T Consensus 82 ~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~ 160 (291)
T cd08994 82 NPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYL 160 (291)
T ss_pred CCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEE
Confidence 676 677899999999976431 122356799999999 4699984 45666644 368888999999865589999
Q ss_pred EEEeccCCC---ccceEEEEEEcCCCCCCceeEEEcCCCceecC--CCC-CCCCCCCCCEE
Q 006523 205 MLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP--PRH-IGPKDFRDPTT 259 (642)
Q Consensus 205 ~~YTG~~~~---~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~--p~g-~~~~~fRDP~V 259 (642)
|+|+|+... ..+.|++|+|.|.. ..|+|...+||+.+ ... .++.-|++.-.
T Consensus 161 m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~~~~~~~~~~dP~V~~~~g~ 217 (291)
T cd08994 161 LVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFIEPGDNGNTEDPFVWYDKGQ 217 (291)
T ss_pred EEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccccCCCCCceeCceEEEeCCE
Confidence 999998642 35778999998862 47999866676422 111 23445565543
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.9e-07 Score=93.30 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=85.2
Q ss_pred CccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEe
Q 006523 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (642)
Q Consensus 129 wmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (642)
..-||. +++.+|+|+|+..-.. + .......+|+||+||+..+.++.+. ..++|...+. ..+|+++|+|+
T Consensus 14 ~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yys 82 (280)
T cd09002 14 DYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYFP 82 (280)
T ss_pred CCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEEE
Confidence 345997 8888999999765211 1 1246778999999999988777542 4579999885 58999999999
Q ss_pred ccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEee
Q 006523 209 GSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (642)
Q Consensus 209 G~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa 274 (642)
.......+.+.+|++++.. -.|++ |+... .....||.+++ +++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 8764444567888886653 35754 22111 11236999966 578999999863
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.3e-07 Score=92.97 Aligned_cols=130 Identities=20% Similarity=0.187 Sum_probs=86.9
Q ss_pred CccCCccceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccceEEcCccCCCCCc------------cCCCCe
Q 006523 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (642)
Q Consensus 129 wmNDPnG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHA~S~DLvhW~~~p~AL~Pd~~------------~D~~Gv 190 (642)
||-||. ++.. +|.|+|+......+. .| .....-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688998 5555 679999987543221 01 1234668999999999998877643321 235679
Q ss_pred EeeeEEEccCCcEEEEEeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCC-ceecCCCCCCCCCCCCCEEEEeCCCCeE
Q 006523 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (642)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~n-PVl~~p~g~~~~~fRDP~V~w~~~~g~w 268 (642)
|...+. ..+|+++|+|+..... ....+.+|++++.. -.|+..... |+ ..-.||.++ .+++|++
T Consensus 80 WAP~v~-~~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELH-YIKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEE-EECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 999886 4689999999976432 23446677766542 357764322 11 124699995 4578999
Q ss_pred EEEEee
Q 006523 269 RLTIGS 274 (642)
Q Consensus 269 ~MviGa 274 (642)
||+.+.
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999875
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=8.8e-07 Score=92.23 Aligned_cols=150 Identities=22% Similarity=0.243 Sum_probs=109.6
Q ss_pred cceEECCEEEEEEeeCC--CCCCCCCcEEEEEEecCccc-eEEcC-ccCCC-CCccCCCCeEeeeEEEccCCcEEEEEec
Q 006523 135 GPLFYKGWYHLFYQYNP--DSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVMLYTG 209 (642)
Q Consensus 135 G~~y~~G~YHLFYQ~nP--~~~~wG~~~WGHA~S~DLvh-W~~~p-~AL~P-d~~~D~~Gv~SGSavv~~dG~~~~~YTG 209 (642)
++++.++++||+|.--- +...-.-.|.+-|.|+|+++ |+-.+ +.+.| ..+++.-||....++ ..+|+++|.|||
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt-~I~~~y~mtYTa 113 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVT-KIGGRYYMTYTA 113 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEE-EECCEEEEEEEe
Confidence 57888999999998610 01111346788899999999 98766 77889 668888999999997 479999999999
Q ss_pred cCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-CC--eeEEEEEE
Q 006523 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GK--TGISLVYQ 286 (642)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~--~G~~~lY~ 286 (642)
.+.. .+..++|.+.|- .+|+|. .+++. | ++||-.++=...+|+|.|+---.. +. .+.+.+..
T Consensus 114 ~s~~-g~~~~la~t~~f-----~n~~ri--g~i~~-p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~niwia~ 178 (314)
T COG2152 114 YSDK-GPRLALAVTKDF-----LNWERI--GAIFP-P------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNIWIAF 178 (314)
T ss_pred cCCC-Ccccchhhhhhh-----hhhhhc--ccccC-C------CCCCceEeeEEecCcEEEEEeecccccCccCceEEEE
Confidence 8543 477899999985 789996 23332 2 456655532235789998864332 22 36689999
Q ss_pred eCCCCCCEEccccc
Q 006523 287 TTDFKTYELLDEYL 300 (642)
Q Consensus 287 S~Dl~~W~~~~~l~ 300 (642)
|.|+.+|...-.++
T Consensus 179 S~dl~~w~~~~~~l 192 (314)
T COG2152 179 SPDLEHWGIHRKLL 192 (314)
T ss_pred cCCccCCCccceee
Confidence 99999998765444
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.5e-06 Score=89.58 Aligned_cols=183 Identities=20% Similarity=0.188 Sum_probs=112.4
Q ss_pred cCCccceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----ceEEcCccCCCCCcc-CCCCeEeeeEEEcc-
Q 006523 131 NDPNGPLF-YKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (642)
Q Consensus 131 NDPnG~~y-~~G~YHLFYQ~nP~~----~~wG~~~WGHA~S~DLv----hW~~~p~AL~Pd~~~-D~~Gv~SGSavv~~- 199 (642)
-|+.|-+. ++|+.-+|-.-.|.. ..|+.-+.++.-|++.. +|++.+.++.....+ ....-|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 35556444 689666666665543 24567899999999998 999999777554321 23457999999887
Q ss_pred CCcEEEEEeccCC----Cccce---EE--EEEEcCCCCCCceeEEEcCCCceecCCCCC--C------CCCCCCCEEEEe
Q 006523 200 DGQIVMLYTGSTD----KSVQV---QN--LAYPADPSDPLLLDWVKYPGNPVLVPPRHI--G------PKDFRDPTTAWA 262 (642)
Q Consensus 200 dG~~~~~YTG~~~----~~~q~---q~--lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~--~------~~~fRDP~V~w~ 262 (642)
||++.||||.... ...|. ++ ++...|. ..-+..|.++ ..++. +.|. . ...||||++| .
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~f-~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHVF-E 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEEE-E
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeec-cchhhhhChhhcCCccccCCeeE-E
Confidence 8999999999542 11222 22 2333332 1123345554 35554 3332 1 2679999994 4
Q ss_pred C-CCCeEEEEEeee---c----------------------C--------CeeEEEEEEeCC--CCCCEEcccccccCCCC
Q 006523 263 G-PDGKWRLTIGSK---I----------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (642)
Q Consensus 263 ~-~~g~w~MviGa~---~----------------------~--------~~G~~~lY~S~D--l~~W~~~~~l~~~~~~~ 306 (642)
+ .+|+-||+.-+. . . ..|++-|.+.+| +..|+++++|+.+..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 3 689988887432 0 0 257777777644 56899999999775434
Q ss_pred CceeeeceEEec
Q 006523 307 GMWECVDFYPVA 318 (642)
Q Consensus 307 gmWECPdlf~l~ 318 (642)
...|-|+++.++
T Consensus 298 de~ERP~iv~~~ 309 (428)
T PF02435_consen 298 DELERPHIVFMN 309 (428)
T ss_dssp S-EEEEEEEEET
T ss_pred ccccCCcEEEEC
Confidence 589999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.7e-06 Score=85.86 Aligned_cols=210 Identities=16% Similarity=0.308 Sum_probs=129.5
Q ss_pred ccccceeeeecCCCC---ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCC----CCCccCC
Q 006523 115 TWQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDI 187 (642)
Q Consensus 115 ~w~Rp~yHf~P~~gw---mNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~----Pd~~~D~ 187 (642)
+|.-..--.+|..|| +-||. .++++|+||+|-..... . .|+-+-+. |+||+..+-|+. +.. ..
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~ 75 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MT 75 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CC
Confidence 344444456788999 78998 77778999999876532 1 24333333 999988876652 221 23
Q ss_pred CCeEeeeEE-EccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCC
Q 006523 188 NGVWTGSAT-ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266 (642)
Q Consensus 188 ~Gv~SGSav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g 266 (642)
.+.|...++ ..+++++||+|+-. ..+.|++.|..+|. .|... .|++...........-|++|+ . +++
T Consensus 76 ~~fwAPqVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P~--~ws~~--qpl~~~~~~~~~~~~ID~~vI-~-Dd~ 143 (303)
T cd08987 76 GYRVAPQVFYFAPQNKWYLIYQWW------PAAYSTNSDISNPN--GWSAP--QPLFSGTPNGSPGGWIDFWVI-C-DDT 143 (303)
T ss_pred cccccCEEeeeccCCEEEEEEecC------ceEEEeCCCCCCCC--ccCCC--cccccCcccCCCCCccceeEE-e-CCC
Confidence 467888875 25789999999941 25789999988774 57764 577653222233456899995 3 578
Q ss_pred eEEEEEeeecCCeeEEEEEEeC-CCCCCEE--cc--cccccCCCCCceeeeceEEecccCccceeeccCCCCeEEEEeee
Q 006523 267 KWRLTIGSKIGKTGISLVYQTT-DFKTYEL--LD--EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKAS 341 (642)
Q Consensus 267 ~w~MviGa~~~~~G~~~lY~S~-Dl~~W~~--~~--~l~~~~~~~gmWECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s 341 (642)
+.||.... . .| .||+|+ .+.+..- -. .+..........|-|+.|++.. .-+++|.++
T Consensus 144 ~~YLff~~-d--nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~G-------------~~~Ylmive 205 (303)
T cd08987 144 NCYLFFSD-D--NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVKG-------------QNQYLLIVE 205 (303)
T ss_pred CEEEEEec-C--CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEECC-------------CeEEEEEEE
Confidence 88888743 2 34 468763 2222211 00 1111111124789999999962 237888887
Q ss_pred cCCCCceEEEEEEecC--CCCcccCC
Q 006523 342 LDDTKVDHYAIGTYNP--ANDKWTPD 365 (642)
Q Consensus 342 ~~~~~~~~Y~iG~fd~--~~~~f~p~ 365 (642)
..+..+..|+++ |-. -.+.|+|.
T Consensus 206 A~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 206 AIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred ecCCCCCCeEEE-EEcCCCCCCceec
Confidence 766544457877 422 23467764
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.47 E-value=7.2e-06 Score=86.82 Aligned_cols=108 Identities=26% Similarity=0.418 Sum_probs=74.1
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEecc
Q 006523 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (642)
Q Consensus 131 NDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (642)
-||. +++++|+|+||-... + +..+|+||++|+..+.++. ..++|..++. ..+|++|+.|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~-~~~g~~Y~~~~~~ 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVF-VYDGTLYYTASTY 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEE-EECCEEEEEEeCC
Confidence 5998 778899999886542 1 3678999999999987653 4579999986 4789876665532
Q ss_pred CCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 006523 211 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 211 ~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
.+.+|+++|.. .--|+.. .+. ......||.+++ ++||++||+.|..
T Consensus 66 ------~~~v~~s~~p~---gp~w~~~--~~~-------~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 66 ------NSRIYKTADPL---SGPWEEV--DKS-------FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred ------CceEEEeCCCC---CCCcccc--ccc-------cCCCccCCceEE-CCCCCEEEEEecC
Confidence 23578876642 1235542 010 112457999954 5789999999753
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.46 E-value=5e-06 Score=85.16 Aligned_cols=156 Identities=17% Similarity=0.140 Sum_probs=96.2
Q ss_pred CCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEE
Q 006523 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (642)
Q Consensus 127 ~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (642)
.+-+-+|. +++++|+|||||+.+..+ ......+.|+|+|+.+|........+ .....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~--~~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP--TSNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC--ccCCCCccCcceEEcCCCCEEEE
Confidence 45567888 889999999999987542 23456899999999998654321111 11244678899988777999999
Q ss_pred EeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec--CCeeEEE
Q 006523 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISL 283 (642)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~--~~~G~~~ 283 (642)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|||++.+.. ...-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1234566666553 22222 233321111111234568988 44 5799999987642 2233566
Q ss_pred EEEeCCCC-CCEEc
Q 006523 284 VYQTTDFK-TYELL 296 (642)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (642)
+.+|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77887763 35543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.4e-06 Score=89.58 Aligned_cols=78 Identities=24% Similarity=0.408 Sum_probs=56.6
Q ss_pred CCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCCEEcccccccCCCCC-ceee
Q 006523 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWEC 311 (642)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-----~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~g-mWEC 311 (642)
.++|||.+.. +...+|||+|++...+|+|||+..... .....+.+|+|+||++|+..+.++...+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 4689998643 458899999976436899999876532 1122578999999999998877643222333 78 9
Q ss_pred eceEEec
Q 006523 312 VDFYPVA 318 (642)
Q Consensus 312 Pdlf~l~ 318 (642)
|++|..+
T Consensus 81 Pev~~d~ 87 (276)
T cd08983 81 PEAFWDA 87 (276)
T ss_pred ccceEcC
Confidence 9999886
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.38 E-value=9.4e-06 Score=84.60 Aligned_cols=174 Identities=16% Similarity=0.165 Sum_probs=102.9
Q ss_pred cccccccccceeeeecCCCC-----ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCcc-CC-C
Q 006523 110 TNAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-P 181 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gw-----mNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~A-L~-P 181 (642)
|..+..|.+...-+.+...| +..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+.. +. +
T Consensus 37 S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~ 113 (287)
T cd08999 37 STDLVNWTYLGDAFPKLPRWWTGGDFWAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCP 113 (287)
T ss_pred CCCCCCcEECCcccCCCCCcccCCCccCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecC
Confidence 33455676554333333332 33454 778899999999876443 235678999999965 89876532 22 2
Q ss_pred CCccCCCCeEeeeEEEccCCcEEEEEeccCCC--ccceEEEE-EEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCE
Q 006523 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (642)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~--~~q~q~lA-~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~ 258 (642)
. +..+....++++++||+++|+|.+.... ..+.+.++ .+.|+ .+|+.. ...++.+........+--|.
T Consensus 114 ~---~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~-~~~i~~~~~~~~~~~~EgP~ 184 (287)
T cd08999 114 E---GEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSADG-----LTLTGE-PVRLLRNDEDWEGPLVEAPY 184 (287)
T ss_pred C---CCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCCC-----ccccCC-cEeeecccccccCCceEeeE
Confidence 2 2345677888877799999999764321 11223444 44443 566542 12333322222223455688
Q ss_pred EEEeCCCCeEEEEEeeec--CC--eeEEEEEEeCCCC-CCEEcc
Q 006523 259 TAWAGPDGKWRLTIGSKI--GK--TGISLVYQTTDFK-TYELLD 297 (642)
Q Consensus 259 V~w~~~~g~w~MviGa~~--~~--~G~~~lY~S~Dl~-~W~~~~ 297 (642)
+ ++ .+|+|||++.+.. .. .=.+.+++|+|+. .|+..+
T Consensus 185 i-~k-~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 185 L-VK-RGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred E-EE-ECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCC
Confidence 8 44 5899999997642 11 2246678999976 777643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.8e-05 Score=81.31 Aligned_cols=156 Identities=17% Similarity=0.150 Sum_probs=97.7
Q ss_pred CccCCccceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccc-eEEcC-ccCCCC--CccCCCCeEeeeEEEccCCcE
Q 006523 129 WMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPD--QWYDINGVWTGSATILPDGQI 203 (642)
Q Consensus 129 wmNDPnG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvh-W~~~p-~AL~Pd--~~~D~~Gv~SGSavv~~dG~~ 203 (642)
-+-.|. +++++ |+|+|||..... ..+....+.|+|+|+.. |+... ..+.+. ...+...+..++++.++||++
T Consensus 59 ~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~ 135 (286)
T cd08772 59 GIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKW 135 (286)
T ss_pred cEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCE
Confidence 345666 66777 999999987543 22356789999999876 45432 112222 122344678899987767999
Q ss_pred EEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec----CCe
Q 006523 204 VMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKT 279 (642)
Q Consensus 204 ~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~----~~~ 279 (642)
+|+|.+........+.+|.|+|. .+|++....+++.... ....+--|.++ + .+|+|||++.+.. +..
T Consensus 136 y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~~ 206 (286)
T cd08772 136 YLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDST 206 (286)
T ss_pred EEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCCC
Confidence 99998765333456788999885 6888753222222211 22455679984 4 5799999997653 222
Q ss_pred eEEEEEEeCC-CCCCEEc
Q 006523 280 GISLVYQTTD-FKTYELL 296 (642)
Q Consensus 280 G~~~lY~S~D-l~~W~~~ 296 (642)
-.+.+++|++ +-.|+..
T Consensus 207 y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 207 YSIGYARSESDTGPYVPK 224 (286)
T ss_pred cceEEEEccCCCCCcccC
Confidence 2455566755 3445443
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.27 E-value=3e-05 Score=81.34 Aligned_cols=171 Identities=14% Similarity=0.139 Sum_probs=96.3
Q ss_pred cccccccceeeeecCC-----CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCccCCCCCcc
Q 006523 112 AMFTWQRTSFHFQPEK-----NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWY 185 (642)
Q Consensus 112 ~~~~w~Rp~yHf~P~~-----gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~ 185 (642)
.+..|.+...-+.++. ..+-.|. +++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.
T Consensus 32 Dl~~W~~~~~~~~~~~~~~~~~~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~--- 105 (294)
T cd08991 32 DLVDWKLHGGALLALDDDWGRRGFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDF--- 105 (294)
T ss_pred CCCCceECCccccCCCCCccCCcEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccC---
Confidence 3445554443343322 2334676 888999999999876432 134678999999977 687665333332
Q ss_pred CCCCeEeeeEEEccCCcEEEEEeccCCCc--cceEEEEEEcCCCCCCceeEEEcCC---CceecC-------CCC----C
Q 006523 186 DINGVWTGSATILPDGQIVMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----I 249 (642)
Q Consensus 186 D~~Gv~SGSavv~~dG~~~~~YTG~~~~~--~q~q~lA~S~D~~d~ll~~w~K~~~---nPVl~~-------p~g----~ 249 (642)
......+++++++||+++|+|+...... ...+..+.+.|. .+|..... .|+..+ +.. .
T Consensus 106 -~~~~iD~~vf~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 179 (294)
T cd08991 106 -EPKSIDAHPFIDDDGKPYLYYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGK 179 (294)
T ss_pred -CCcccCCceEECCCCCEEEEEEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccc
Confidence 2345678888887899999998754321 123344556553 45542111 122111 000 0
Q ss_pred CCCCCCCCEEEEeCCCCeEEEEEeeec-CCee-EEEEEEeCC-CCCCEEc
Q 006523 250 GPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (642)
Q Consensus 250 ~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G-~~~lY~S~D-l~~W~~~ 296 (642)
+..-.--|.+ ++ .+|+|||++.+.. .... .+.+.+|++ +-.|+..
T Consensus 180 ~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 180 DWRTNEGPTV-LK-HNGRYYLTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred cCceeeCcEE-EE-ECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 1112335777 34 5799999986532 1111 355567776 4567653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.8e-05 Score=79.97 Aligned_cols=150 Identities=15% Similarity=0.063 Sum_probs=91.1
Q ss_pred CCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCc-cCCCCCccCCCCeEeeeEEEccCCcEEE
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPI-AMVPDQWYDINGVWTGSATILPDGQIVM 205 (642)
Q Consensus 128 gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~-AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (642)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+.... .+.+ ...+.......++++++||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 3345576 78899999999997643 234678999999976 7987653 3322 22234456788888877899999
Q ss_pred EEeccCCCccceEEEE-EEcCCCCCCceeEEEcCCCceecCCC---CCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeE
Q 006523 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (642)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~d~ll~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~ 281 (642)
+|.+. +...++ .+.| +.+|+.. ..+|..+. .....-+-=|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 223444 3334 3566542 22332110 001112235777 44 6899999987642 344
Q ss_pred EEEEEeCCCC-CCEEccc
Q 006523 282 SLVYQTTDFK-TYELLDE 298 (642)
Q Consensus 282 ~~lY~S~Dl~-~W~~~~~ 298 (642)
+.+.+|+++. -|+..+.
T Consensus 201 ~~~a~s~~p~GP~~~~g~ 218 (274)
T cd08990 201 IAYATSDSPLGPFTYRGV 218 (274)
T ss_pred EEEEEcCCCCCCcccCcE
Confidence 5555777764 3554433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.6e-05 Score=82.86 Aligned_cols=120 Identities=15% Similarity=0.165 Sum_probs=71.1
Q ss_pred CCCCEEEEeCCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCCEEcccccccCC---------------CCCce
Q 006523 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP---------------GTGMW 309 (642)
Q Consensus 254 fRDP~V~w~~~~g~w~MviGa~~~---------~~G~~~lY~S~Dl~~W~~~~~l~~~~~---------------~~gmW 309 (642)
||||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..++|
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999995 4467889888765421 123578999999999999887764321 12366
Q ss_pred eeeceEEecccCccceeeccCCCCeEEEEeeecCCC--CceEEEEEEecCCCCcccCCCCCcccccceeeccCcccceee
Q 006523 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKS 387 (642)
Q Consensus 310 ECPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~--~~~~Y~iG~fd~~~~~f~p~~~~~D~g~~~~lD~G~fYA~qt 387 (642)
||+++.++ .+++|-.+.... ......+.+=|.-.+.|+..... + .+. .-.-+..
T Consensus 81 -AP~v~~~~---------------g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~ 136 (269)
T cd08986 81 -APELHYIK---------------GRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSL 136 (269)
T ss_pred -CceEEEEC---------------CEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCce
Confidence 99999985 267777665431 12223333323223456532110 0 001 1234677
Q ss_pred EecCCCCcEEEE
Q 006523 388 FYDPYKKRRIVW 399 (642)
Q Consensus 388 f~d~~~gRrIl~ 399 (642)
|.|. +|+..|+
T Consensus 137 f~D~-DG~~Yl~ 147 (269)
T cd08986 137 FEDD-DGKVYLV 147 (269)
T ss_pred EEcC-CCCEEEE
Confidence 8886 6777665
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.14 E-value=2.4e-05 Score=82.28 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=97.4
Q ss_pred CcccccccccceeeeecCCCCccCCcc-----ceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccceEEcCcc-CC
Q 006523 109 WTNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPIA-MV 180 (642)
Q Consensus 109 ~~~~~~~w~Rp~yHf~P~~gwmNDPnG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHA~S~-DLvhW~~~p~A-L~ 180 (642)
.|..++.|++...=+.|... .|.+| .+.++ |+|+|||.-+......+...-++|+|+ |+++|+..+.. +.
T Consensus 38 ~S~Dlv~W~~~~~al~p~~~--~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~ 115 (298)
T cd08996 38 TSKDLVHWEHLPVALAPDDP--YDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVI 115 (298)
T ss_pred EecCccceeECCcccCCCCc--ccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceE
Confidence 34556778765533444322 23333 34456 999999986543211234668899999 89999987622 22
Q ss_pred CCCccCCCCeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEE
Q 006523 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (642)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (642)
+....+..+.-...++. .+|+++|+|++...+......++.|.|+ ++|++. .++.... +.....+--|.++
T Consensus 116 ~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l~ 186 (298)
T cd08996 116 PPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDLF 186 (298)
T ss_pred cCCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcEE
Confidence 11223345667888865 5699999999876544456788999884 899985 3443211 1122345678883
Q ss_pred EeCCC--CeEEEEEeee
Q 006523 261 WAGPD--GKWRLTIGSK 275 (642)
Q Consensus 261 w~~~~--g~w~MviGa~ 275 (642)
+ -+ ++|+|+++..
T Consensus 187 -~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 187 -P-LDVEGKWVLIFSPQ 201 (298)
T ss_pred -E-ECCCCeEEEEECCC
Confidence 3 46 9999999865
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.14 E-value=9.5e-06 Score=86.65 Aligned_cols=106 Identities=22% Similarity=0.277 Sum_probs=79.8
Q ss_pred CCCeEeeeEEEccCCc--EEEEEeccCCCccc-eEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeC
Q 006523 187 INGVWTGSATILPDGQ--IVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (642)
Q Consensus 187 ~~Gv~SGSavv~~dG~--~~~~YTG~~~~~~q-~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~ 263 (642)
...||-..|++ .+|+ ++|+|.+....... .+++|.|.|+ ++|++. .+||+.|...++....-||-|..
T Consensus 29 ~~~vfNpgai~-~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~-- 99 (312)
T PF04041_consen 29 PNAVFNPGAIV-FDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK-- 99 (312)
T ss_dssp SSEEEEEEEEE-ETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE--
T ss_pred cceEEcCcEEE-ECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE--
Confidence 46799999975 4554 89999887654444 7899999996 799886 58999875555556678999975
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccc
Q 006523 264 PDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (642)
Q Consensus 264 ~~g~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~ 301 (642)
.+++|+|++.+.......+.+.+|+||.+|+..+..+.
T Consensus 100 i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988755555677889999999999987654
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00012 Score=76.72 Aligned_cols=148 Identities=17% Similarity=0.150 Sum_probs=87.7
Q ss_pred ccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEE
Q 006523 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (642)
Q Consensus 130 mNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DL--vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~Y 207 (642)
+-.|. +++.+|+|||||..+..+. +....++|+|+|+ -.|+..++.+.+...+....+..+++++++||+++|+|
T Consensus 58 ~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~~ 134 (288)
T cd08998 58 LWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLSF 134 (288)
T ss_pred ccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEEe
Confidence 44565 7788999999998764321 2456899999998 78998775555543323445778899887799999999
Q ss_pred eccCCCccceEEEEE-EcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-C---Cee-E
Q 006523 208 TGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G---KTG-I 281 (642)
Q Consensus 208 TG~~~~~~q~q~lA~-S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~---~~G-~ 281 (642)
..... .+.++. +.|.+.+ ..+... ...++..+.. ..-.-.|++ ++ .+|+|||++.+.. . ..+ +
T Consensus 135 ~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 135 GSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred eeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCceE
Confidence 75421 123332 2232221 122110 0112222111 122347888 44 6899999986431 1 112 4
Q ss_pred EEEEEeCCCC
Q 006523 282 SLVYQTTDFK 291 (642)
Q Consensus 282 ~~lY~S~Dl~ 291 (642)
+.+++|+++.
T Consensus 204 v~~~~s~~~~ 213 (288)
T cd08998 204 IRVGRSKSIT 213 (288)
T ss_pred EEEEEcCCCC
Confidence 6688898753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00016 Score=74.98 Aligned_cols=171 Identities=13% Similarity=0.140 Sum_probs=101.1
Q ss_pred cccccccccceeeeecCCCCccC-------CccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCccCCC
Q 006523 110 TNAMFTWQRTSFHFQPEKNWMND-------PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVP 181 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gwmND-------PnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~P 181 (642)
|..|..|......+.+...+... |. +++++|+|||||+..... .....+.|+|++.. .|+.......+
T Consensus 40 S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~-i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~ 115 (286)
T PF04616_consen 40 SKDLVNWTDAGNVLPPPPDWDWANNGNIWAPE-IHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP 115 (286)
T ss_dssp ESSSSSEEEEEECESSTTTTSTTTSETTEEEE-EEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE
T ss_pred CCCCcccccceeeecccccccccccccccCCe-EEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec
Confidence 44567788777777665544422 32 677899999999922211 23458899999986 89877643322
Q ss_pred CCccCCCCeEeeeEEEccCCcEEEEEeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEE
Q 006523 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (642)
Q Consensus 182 d~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (642)
...+..+++++++||+.+|+|.+.... ..+.+.++...+.. .++.......+..........-.--|++
T Consensus 116 -----~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~- 185 (286)
T PF04616_consen 116 -----GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV- 185 (286)
T ss_dssp -----SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-
T ss_pred -----cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-
Confidence 335667888888789999999987543 23444555443321 3444321122222111111122334777
Q ss_pred EeCCCCeEEEEEeeec-CCeeEEEEEEeCCCCC-CEE
Q 006523 261 WAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKT-YEL 295 (642)
Q Consensus 261 w~~~~g~w~MviGa~~-~~~G~~~lY~S~Dl~~-W~~ 295 (642)
++ .+|+|||++.+.. ...-.+.+++|+|+.. |+.
T Consensus 186 ~k-~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~ 221 (286)
T PF04616_consen 186 FK-HGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEW 221 (286)
T ss_dssp EE-ETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEE
T ss_pred EE-cCCCEEEEEeccCCCCCceEEEeeccCCCCceee
Confidence 44 6899999987642 2123466789999865 444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00023 Score=74.29 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=73.4
Q ss_pred CceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccC---------CCCCcee
Q 006523 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (642)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~---------~~~gmWE 310 (642)
||||. .++.||.|+. .++.|||+.+......| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 68874 3578999953 57899999765322223 6789999999999988765421 123588
Q ss_pred eeceEEecccCccceeeccCCCCeEEEEeeecCCC---CceEEEEEEecCCCCcccCCCCCcccccceeeccCcccceee
Q 006523 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKS 387 (642)
Q Consensus 311 CPdlf~l~~~g~~~l~~s~~g~~~k~vl~~s~~~~---~~~~Y~iG~fd~~~~~f~p~~~~~D~g~~~~lD~G~fYA~qt 387 (642)
||+++..+ .||+|-.+.... ...+.++. |...+.|+. + ...+. .-.=+..
T Consensus 70 AP~v~~~~---------------G~yy~yy~~~~~~~~~~i~va~s--d~~~Gpw~~--~-------~~~~~-~~IDp~~ 122 (269)
T cd08989 70 APCLSYYD---------------GKFWLIYTAVKVWKDCHNYLFTA--EDITGPWSR--P-------IFLNY-GGFDPSL 122 (269)
T ss_pred cceEEEEC---------------CEEEEEEeccccCCCceEEEEEE--CCCCCCCcC--C-------EECCC-CcccCce
Confidence 99999884 267777665422 12223333 222345642 1 01111 1122566
Q ss_pred EecCCCCcEEEE
Q 006523 388 FYDPYKKRRIVW 399 (642)
Q Consensus 388 f~d~~~gRrIl~ 399 (642)
|.|. +|+..|+
T Consensus 123 f~D~-dG~~Yl~ 133 (269)
T cd08989 123 FHDD-DGKKYLI 133 (269)
T ss_pred EEcC-CCCEEEE
Confidence 7775 6888776
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0004 Score=72.95 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=55.3
Q ss_pred CCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEcccccccCCCCCceeeeceEEec
Q 006523 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (642)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 318 (642)
.||||. .++.||.|++ .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 389985 2468999954 4789999765322 22347799999999999988765432 23589 89998874
Q ss_pred ccCccceeeccCCCCeEEEEeeecC
Q 006523 319 INGSVGLDTSATGPGIKHVLKASLD 343 (642)
Q Consensus 319 ~~g~~~l~~s~~g~~~k~vl~~s~~ 343 (642)
.|++|-.+..
T Consensus 75 ---------------gkyy~yys~~ 84 (280)
T cd09002 75 ---------------GRYYIYFPAI 84 (280)
T ss_pred ---------------CEEEEEEEee
Confidence 2677776654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00031 Score=78.59 Aligned_cols=155 Identities=14% Similarity=0.152 Sum_probs=91.3
Q ss_pred cccccccccceeeeecCCCC----ccCCccceEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccceEEcC-ccCCCCC
Q 006523 110 TNAMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPDQ 183 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gw----mNDPnG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHA~S~DLvhW~~~p-~AL~Pd~ 183 (642)
|..+..|++-.-=+.|..-| +-.++ .+..+|++||||.-+.....+. ...-++|+|+|+.+|+..+ +.|.+..
T Consensus 62 S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~ 140 (445)
T TIGR01322 62 SKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPP 140 (445)
T ss_pred CCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCC
Confidence 44567786644344454322 11333 3457899999999764322222 2334689999999998876 4554432
Q ss_pred ccCCCCeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCC---CCCCCCCCCCEEE
Q 006523 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTA 260 (642)
Q Consensus 184 ~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~---g~~~~~fRDP~V~ 260 (642)
.....+.-...++ ..+|+++|+|.+..........+..|+| |++|+.. .++..+.. +.....+--|-+
T Consensus 141 ~~~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl- 211 (445)
T TIGR01322 141 AGYTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL- 211 (445)
T ss_pred CCCcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-
Confidence 2112234456664 4689999999876433223446777777 4899986 35543321 111123456776
Q ss_pred EeCCCCeEEEEEeee
Q 006523 261 WAGPDGKWRLTIGSK 275 (642)
Q Consensus 261 w~~~~g~w~MviGa~ 275 (642)
+. -+|+|+|+++..
T Consensus 212 f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 212 FS-LDGQDVLLFSPQ 225 (445)
T ss_pred EE-ECCcEEEEEecc
Confidence 33 578999998754
|
|
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00064 Score=71.91 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=53.5
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeeecCC----eeEEEEEEeCCCCCCEEcccccccCC---CCCceeeeceEEecccCccc
Q 006523 252 KDFRDPTTAWAGPDGKWRLTIGSKIGK----TGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVAINGSVG 324 (642)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~MviGa~~~~----~G~~~lY~S~Dl~~W~~~~~l~~~~~---~~gmWECPdlf~l~~~g~~~ 324 (642)
..+|||+|++...+|+|||+..+.... ...+-+|+|+||.+|+..+.++.... ......+|+++..+
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~------ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK------ 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC------
Confidence 458999997654589999998764211 12367999999999999887764322 12234589998774
Q ss_pred eeeccCCCCeEEEEeeecCC
Q 006523 325 LDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 325 l~~s~~g~~~k~vl~~s~~~ 344 (642)
.+++|-.+...
T Consensus 78 ---------G~yyly~s~~~ 88 (291)
T cd08981 78 ---------GRYYMFATFHN 88 (291)
T ss_pred ---------CEEEEEEEecc
Confidence 26777766543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0013 Score=71.24 Aligned_cols=173 Identities=16% Similarity=0.160 Sum_probs=101.1
Q ss_pred cCcccccccccceeeeecCCCCcc-----CCccceEECCEEEEEEeeCCCCC---CCCCcEEEEEEecCccceE----Ec
Q 006523 108 NWTNAMFTWQRTSFHFQPEKNWMN-----DPNGPLFYKGWYHLFYQYNPDSA---VWGNITWGHAVSADLIHWL----YL 175 (642)
Q Consensus 108 ~~~~~~~~w~Rp~yHf~P~~gwmN-----DPnG~~y~~G~YHLFYQ~nP~~~---~wG~~~WGHA~S~DLvhW~----~~ 175 (642)
-.+..+..|.+ .-++.|+ +|.- -+..++..+|+|||||.-+-... .--.+..++++++|+..|. .+
T Consensus 46 ~~S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~ 123 (349)
T cd08997 46 FYSRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDH 123 (349)
T ss_pred EEeCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCcc
Confidence 33455666765 3355554 3321 12223334599999999763211 1123678999999985553 33
Q ss_pred CccCCCCC-ccCC-------------CCeEeeeEEEcc-CCcEEEEEeccCCCc--------------------------
Q 006523 176 PIAMVPDQ-WYDI-------------NGVWTGSATILP-DGQIVMLYTGSTDKS-------------------------- 214 (642)
Q Consensus 176 p~AL~Pd~-~~D~-------------~Gv~SGSavv~~-dG~~~~~YTG~~~~~-------------------------- 214 (642)
...+.++. .|+. ...-..-++.++ +|+.+|++++++...
T Consensus 124 ~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 203 (349)
T cd08997 124 HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASY 203 (349)
T ss_pred ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCcccccccccccccccccccccccc
Confidence 33445554 3321 123355666554 599999999987421
Q ss_pred -cceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecC-------CeeEEEEEE
Q 006523 215 -VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVYQ 286 (642)
Q Consensus 215 -~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~-------~~G~~~lY~ 286 (642)
.-.+++|.+.+. . |.+|+-+ .|++.+. +. ...+-.|.++ + .+|+|||+..++.. ....+..|.
T Consensus 204 ~~G~IGia~~~s~--d-l~~W~~~--~PL~~a~-~v-~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~v 274 (349)
T cd08997 204 QNGNVGIAVAKND--D-LTEWKLL--PPLLEAN-GV-NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFV 274 (349)
T ss_pred ccceEEEEEecCC--C-CCCcEEc--CccccCC-Cc-CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEE
Confidence 124567766542 1 4789876 5787643 22 2346799994 4 69999999775421 112356678
Q ss_pred eCCCC
Q 006523 287 TTDFK 291 (642)
Q Consensus 287 S~Dl~ 291 (642)
|++|.
T Consensus 275 sdsl~ 279 (349)
T cd08997 275 SDSLR 279 (349)
T ss_pred eCCCC
Confidence 88874
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0023 Score=67.12 Aligned_cols=146 Identities=16% Similarity=0.177 Sum_probs=83.3
Q ss_pred cCCCCccCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCcc-CCCCCccCCC--CeEeeeEEEccCC
Q 006523 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPDG 201 (642)
Q Consensus 125 P~~gwmNDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~A-L~Pd~~~D~~--Gv~SGSavv~~dG 201 (642)
+...+..||+ ++.++|+++|||...-.....+.--|..-.+ |...+...+.. ..|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456778997 6667899989886422111111122333333 33344433322 3455555554 4677888888899
Q ss_pred cEEEEEeccCC-CccceEEEEEEcCCCCCCc-eeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCe-EEEEEee
Q 006523 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (642)
Q Consensus 202 ~~~~~YTG~~~-~~~q~q~lA~S~D~~d~ll-~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~-w~MviGa 274 (642)
.++|+|.+... .....+++|+++...+++. ..|+|. .+|||.....-....--...+ ....+|+ |+|++=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997653 3344567888765433332 258886 479887543100111123445 3456787 8888744
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0038 Score=65.47 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=79.4
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------ceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEE
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv------hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~ 205 (642)
-|. +.+++|+|||||.....+. .....|.|+|++.. .|+...+.+.++.. +..+...+++++++||+.+|
T Consensus 59 AP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Yl 134 (279)
T cd08988 59 APD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPWL 134 (279)
T ss_pred cce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEEE
Confidence 344 6788999999998765432 23568999999853 25543333333322 12345788999888999999
Q ss_pred EEeccCCCccceEEEEEEcCCCCCCceeEEEc-CCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CCe
Q 006523 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKT 279 (642)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~-~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-----~~~ 279 (642)
+|..... . .+..-.+.|... .... ....++..+. .....--|++ ++ .+|+|||+..+.. +..
T Consensus 135 ~~g~~~~-g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~~~ 202 (279)
T cd08988 135 SFGSFWG-G--IKLFELDKDTMK-----PAEPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGDST 202 (279)
T ss_pred EecccCC-C--EEEEEECcccCC-----ccCCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCCCC
Confidence 9964311 1 122223333221 1000 0011222111 1122346777 55 6899999876431 122
Q ss_pred eEEEEEEeCCC
Q 006523 280 GISLVYQTTDF 290 (642)
Q Consensus 280 G~~~lY~S~Dl 290 (642)
-.+.+++|+++
T Consensus 203 y~v~~arS~~~ 213 (279)
T cd08988 203 YKIAVGRSKNI 213 (279)
T ss_pred eEEEEEEeCCC
Confidence 35777889876
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.001 Score=74.33 Aligned_cols=155 Identities=16% Similarity=0.199 Sum_probs=91.0
Q ss_pred cccccccccceeeeecCCCCccCCcc-----ceEECCEEEEEEeeCC-CCC--CCCCcE-EEEEEecCccceEEcC--cc
Q 006523 110 TNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNIT-WGHAVSADLIHWLYLP--IA 178 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gwmNDPnG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~~-WGHA~S~DLvhW~~~p--~A 178 (642)
|..++.|++..-=+.|.. + .|.+| .+.++|.||+||.-+- ... ..+... -.+|+|+|+++|+..+ +.
T Consensus 45 S~Dlv~W~~~~~aL~P~~-~-~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pv 122 (437)
T smart00640 45 SKDLVHWTHLPVALAPDE-W-YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPV 122 (437)
T ss_pred cCCcceeeecCcccCCCC-c-CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcE
Confidence 445677865433355554 2 35555 3445788999998652 111 122222 3678899999999873 55
Q ss_pred CCCCCccCCCCeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCE
Q 006523 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (642)
Q Consensus 179 L~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~ 258 (642)
|.+...+.....-...++..++|+++|++.+...+..-.+.++.|+|+ ++|+.. .+++.++.+.....|--|-
T Consensus 123 i~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPd 195 (437)
T smart00640 123 LVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPD 195 (437)
T ss_pred EeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCc
Confidence 554332323334456665444468999998765444455778888874 899886 3554431111113455676
Q ss_pred EEEeCCCC-----eEEEEEeee
Q 006523 259 TAWAGPDG-----KWRLTIGSK 275 (642)
Q Consensus 259 V~w~~~~g-----~w~MviGa~ 275 (642)
.+ . -++ +|+|+++..
T Consensus 196 lf-~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 196 LF-P-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EE-E-eCCCCCceeEEEEECcC
Confidence 63 2 334 899998765
|
|
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00048 Score=72.17 Aligned_cols=117 Identities=16% Similarity=0.244 Sum_probs=86.0
Q ss_pred ccCCCCCc--cCCC----CeEeeeEEEccCCcEEEEEeccC-----CCccceEEEEEEcCCCCCCcee-EEEcCCCceec
Q 006523 177 IAMVPDQW--YDIN----GVWTGSATILPDGQIVMLYTGST-----DKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLV 244 (642)
Q Consensus 177 ~AL~Pd~~--~D~~----Gv~SGSavv~~dG~~~~~YTG~~-----~~~~q~q~lA~S~D~~d~ll~~-w~K~~~nPVl~ 244 (642)
+.+.|... ++.. .+|-++++. .++++.|+|-... ........+|.|+|+ .+ |++. .+|++.
T Consensus 12 pIi~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~ 84 (314)
T COG2152 12 PIITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLW 84 (314)
T ss_pred CceeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEe
Confidence 34455443 4555 789998864 6899999998732 224567789999987 45 9986 489998
Q ss_pred C-CCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeCCCCCCEEccccccc
Q 006523 245 P-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (642)
Q Consensus 245 ~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~Dl~~W~~~~~l~~~ 302 (642)
| ...++....-||-|. + .+|+|+|.+.+..+..-+..+..++|+.+|++.+.++.+
T Consensus 85 P~~~~~e~~G~EDPRvt-~-I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 85 PANYPYEIYGIEDPRVT-K-IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred cCCCchhhhcccCceEE-E-ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 7 333455667899995 3 689999999987555445778889999999999887643
|
|
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0041 Score=64.69 Aligned_cols=136 Identities=15% Similarity=0.099 Sum_probs=80.5
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEE-cC-ccCCCCCccCCCCeEeeeEEEccCCcEEEEEe
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~-~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YT 208 (642)
=|. +++++|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......+++++++||+.+|+|.
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~ 136 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWG 136 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEc
Confidence 355 788899999999864 347999999965 6876 33 3333321 23346678888778999999996
Q ss_pred ccCCCccceEEE-EEEcCCCCCCceeEEEcCCCcee-cCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec--CCeeEEEE
Q 006523 209 GSTDKSVQVQNL-AYPADPSDPLLLDWVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTGISLV 284 (642)
Q Consensus 209 G~~~~~~q~q~l-A~S~D~~d~ll~~w~K~~~nPVl-~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~--~~~G~~~l 284 (642)
+.. ...+ ..+.|. .+|+.. ..++ ..+. .-+--|.+ ++ .+|+|||++.+.. +..-.+.+
T Consensus 137 ~~~-----~~~i~~l~~d~-----~~~~~~--~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~y 198 (275)
T cd09004 137 GWG-----HCNVAKLNEDM-----ISFDGE--RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAY 198 (275)
T ss_pred CcC-----CEEEEEECCCc-----ccccCc--ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEEE
Confidence 531 1222 234442 456432 1121 1111 12346888 44 6899999887642 11224555
Q ss_pred EEeCCCC-CCEEc
Q 006523 285 YQTTDFK-TYELL 296 (642)
Q Consensus 285 Y~S~Dl~-~W~~~ 296 (642)
.+|++.. -|+..
T Consensus 199 a~s~~~~GP~~~~ 211 (275)
T cd09004 199 AMADSPLGPFERP 211 (275)
T ss_pred EEcCCCCCCcccC
Confidence 6777753 25543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0097 Score=62.03 Aligned_cols=141 Identities=16% Similarity=0.197 Sum_probs=84.1
Q ss_pred ceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEeccCC
Q 006523 136 PLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 212 (642)
Q Consensus 136 ~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~ 212 (642)
++|+ +|+|||||..+..+ .+....|+|+|++.. -|+.++..+ |. ..+....++++++||+.+|+|.....
T Consensus 70 v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~~~ 142 (265)
T cd08985 70 VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDRDN 142 (265)
T ss_pred EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecCCC
Confidence 5664 59999999987522 245679999999865 487765332 21 23467788888889999999986421
Q ss_pred CccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecC-CeeEEEEEEeCCCC
Q 006523 213 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDFK 291 (642)
Q Consensus 213 ~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~-~~G~~~lY~S~Dl~ 291 (642)
+...++.-.+ .++...+.+..... ....-.|.+ ++ .+|.|||+...... ....+..++|+++.
T Consensus 143 ---~~i~i~~L~~-------d~~~~~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~~s~s~~ 206 (265)
T cd08985 143 ---SDLYIYRLTD-------DYLSVTGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYATATSIL 206 (265)
T ss_pred ---CceEEEEeCC-------CcccccceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEEEecCCC
Confidence 2234443322 12222223332111 134558988 55 68999999865321 11235566777763
Q ss_pred -CCEEcccc
Q 006523 292 -TYELLDEY 299 (642)
Q Consensus 292 -~W~~~~~l 299 (642)
.|+..+.+
T Consensus 207 GP~~~~~~~ 215 (265)
T cd08985 207 GPWTDLGNP 215 (265)
T ss_pred CCccccCcC
Confidence 46555443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0056 Score=63.87 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=75.2
Q ss_pred CCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEecc
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (642)
Q Consensus 132 DPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~ 210 (642)
-|. +.|.+|+|||||..+. ..-+.|+|++.. .|+..+... ....+++++++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 454 7888999999998751 124677887744 576654221 3457788888899999998653
Q ss_pred CCCccceEEEEE-EcCCCCCCceeEEEcCCCce-ecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeC
Q 006523 211 TDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (642)
Q Consensus 211 ~~~~~q~q~lA~-S~D~~d~ll~~w~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~ 288 (642)
.+.++. +.|. .... ...++ +..+. ......--|++ ++ .+|+|||++.+.......+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeC
Confidence 233433 3332 2221 12233 33221 11123446888 44 6899999987542222346678888
Q ss_pred CCC
Q 006523 289 DFK 291 (642)
Q Consensus 289 Dl~ 291 (642)
++.
T Consensus 205 ~~~ 207 (269)
T cd09001 205 SLT 207 (269)
T ss_pred CCC
Confidence 854
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.011 Score=63.63 Aligned_cols=167 Identities=19% Similarity=0.230 Sum_probs=98.6
Q ss_pred ccccceeeeecC--CCCccCCccceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cceEEcCccCCCCC
Q 006523 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (642)
Q Consensus 115 ~w~Rp~yHf~P~--~gwmNDPnG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHA~S~DL-vhW~~~p~AL~Pd~ 183 (642)
.|..++.-.... ...+.||. ++... |+.+|||...+... .+...+..+..|.|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 565554333332 24556888 66766 99999998877642 123456677888885 89974 33333322
Q ss_pred c-cCCCCeE--eeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEE
Q 006523 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (642)
Q Consensus 184 ~-~D~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (642)
. .+....+ .|..++..+|++++.+.+....+.....+.+|+|.+ .+|+... ++. + ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GVN--D----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CCC--C----CCCCcCCEEE
Confidence 0 0112233 233455678998776554433334556678898875 8997632 111 1 1234568875
Q ss_pred EeCCCCeEEEEEeeecCCeeEEEEEEeCC-CCCCEEccc
Q 006523 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (642)
Q Consensus 261 w~~~~g~w~MviGa~~~~~G~~~lY~S~D-l~~W~~~~~ 298 (642)
- -++|+.+|+..... .+...+|.|.| ..+|+....
T Consensus 205 e-l~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 E-LSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred E-ecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 2 25898888765432 45666788877 589986543
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.018 Score=60.41 Aligned_cols=142 Identities=17% Similarity=0.104 Sum_probs=80.7
Q ss_pred cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEec
Q 006523 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (642)
Q Consensus 131 NDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG 209 (642)
.-|. ++|++|+|||||...... + ...-+.++|+|.. -|++ +. +.+. .+..++++.++||+++|+|..
T Consensus 69 WAP~-v~~~~g~yy~yy~~~~~~--~-~~~~~v~~s~~p~gpw~~-~~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 69 WAPT-IRYHDGTFYLITTNVDGM--K-DGGNFIVTADDPAGPWSD-PV-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred Ecce-EEEECCEEEEEEEecCCC--C-CCceEEEEeCCCCCCCcC-CE-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 3465 788899999999876432 2 2345678898873 6764 22 2221 456788888779999998765
Q ss_pred cCCC----ccceEEEEEEcCCCCCCceeEEEcCCCce-ecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCeeEEE
Q 006523 210 STDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (642)
Q Consensus 210 ~~~~----~~q~q~lA~S~D~~d~ll~~w~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~-~~~G~~~ 283 (642)
.... ....+.++.... ..++- .+.|+ +.... .....--|.+ ++ .+|+|||++.... ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~--~~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGT--GGRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCC--CCCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEE
Confidence 4221 123344443322 11211 12221 11110 0112346887 55 6899999985432 1223567
Q ss_pred EEEeCCCC-CCEE
Q 006523 284 VYQTTDFK-TYEL 295 (642)
Q Consensus 284 lY~S~Dl~-~W~~ 295 (642)
+++|+++. -|+.
T Consensus 206 ~~~s~~~~Gp~~~ 218 (288)
T cd09000 206 VARSRSITGPYEP 218 (288)
T ss_pred EEEeCCCCCCCcc
Confidence 88999876 5654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.021 Score=61.06 Aligned_cols=168 Identities=13% Similarity=0.205 Sum_probs=91.2
Q ss_pred ccccccccceeeeec--CCCCcc---CCccceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-ceEEc-CccC
Q 006523 111 NAMFTWQRTSFHFQP--EKNWMN---DPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM 179 (642)
Q Consensus 111 ~~~~~w~Rp~yHf~P--~~gwmN---DPnG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLv-hW~~~-p~AL 179 (642)
..|..|+....-|.| ...|.. -|. +++++ |+|+|||... ....|.|+|++.. .|+.+ +..|
T Consensus 54 ~DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l 125 (311)
T cd09003 54 DDMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPL 125 (311)
T ss_pred CCCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCee
Confidence 345567554444432 223322 354 67777 9999999632 2357999999955 79864 3222
Q ss_pred -CCC-CccC-CCCeEeeeEEEccCCcEEEEEeccCC----CccceEEEEEEc-CCCCCCceeEEEcCCCceecCCCCCCC
Q 006523 180 -VPD-QWYD-INGVWTGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGP 251 (642)
Q Consensus 180 -~Pd-~~~D-~~Gv~SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~-D~~d~ll~~w~K~~~nPVl~~p~g~~~ 251 (642)
.+. ...+ ......+++++++||+.+|+|.+... ...+...+|.-. |. .+ ..+.++....+
T Consensus 126 ~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~---- 193 (311)
T cd09003 126 ITGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP---- 193 (311)
T ss_pred ecCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----
Confidence 211 1111 12256888888889999999975321 111234444333 32 22 22333332111
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeeec-------CCeeEEEEEEeCCCC-CCEEccccc
Q 006523 252 KDFRDPTTAWAGPDGKWRLTIGSKI-------GKTGISLVYQTTDFK-TYELLDEYL 300 (642)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~MviGa~~-------~~~G~~~lY~S~Dl~-~W~~~~~l~ 300 (642)
..+-=|++ ++ .+|+|||++.+.- .....+.+.+|++.. -|+..+.++
T Consensus 194 ~~~Egp~~-~K-~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 194 YFFEASGL-HK-INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CceEeeeE-EE-ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 23446777 44 6899999886531 223345555777643 466554443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.021 Score=58.86 Aligned_cols=164 Identities=19% Similarity=0.307 Sum_probs=95.3
Q ss_pred ccccceeeeecC--CCCccCCccceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccceEEcCccCCCCCccCCCCe
Q 006523 115 TWQRTSFHFQPE--KNWMNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV 190 (642)
Q Consensus 115 ~w~Rp~yHf~P~--~gwmNDPnG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv 190 (642)
+|-.|+-=+.++ ..=..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+.
T Consensus 31 tWs~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~ 108 (275)
T PF13088_consen 31 TWSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGP 108 (275)
T ss_dssp EEEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEEC
T ss_pred eeCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceecc
Confidence 465555444444 22335676 444 499999999666555445444444599999 99998754 2222211222344
Q ss_pred EeeeEEEccCCcEEEE-EeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEE
Q 006523 191 WTGSATILPDGQIVML-YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWR 269 (642)
Q Consensus 191 ~SGSavv~~dG~~~~~-YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~ 269 (642)
..+.++...+|++++- |.. . .......+.+|.|++ ++|+... ++.. ....--|.++ ...+|+.+
T Consensus 109 ~~~~~i~~~~G~l~~~~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~-~~~dG~l~ 173 (275)
T PF13088_consen 109 GRGPPIQLPDGRLIAPYYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIV-ELPDGRLL 173 (275)
T ss_dssp SEEEEEEECTTEEEEEEEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEE-EETTSEEE
T ss_pred ceeeeeEecCCCEEEEEeec-c-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEE-ECCCCcEE
Confidence 4554456679987775 443 1 223566788999986 8998752 2210 0122245553 34788888
Q ss_pred EEEeeecCCeeEEEEEEeCC-CCCCEEcc
Q 006523 270 LTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (642)
Q Consensus 270 MviGa~~~~~G~~~lY~S~D-l~~W~~~~ 297 (642)
|++-.. . .+.+.+++|.| ..+|+...
T Consensus 174 ~~~R~~-~-~~~~~~~~S~D~G~TWs~~~ 200 (275)
T PF13088_consen 174 AVFRTE-G-NDDIYISRSTDGGRTWSPPQ 200 (275)
T ss_dssp EEEEEC-S-STEEEEEEESSTTSS-EEEE
T ss_pred EEEEcc-C-CCcEEEEEECCCCCcCCCce
Confidence 887553 1 22666778877 89998743
|
... |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0078 Score=67.83 Aligned_cols=140 Identities=23% Similarity=0.397 Sum_probs=79.7
Q ss_pred EEEEecCccceEEcCccCCCCC------cc-CCCCeEeeeEEEccCCcEEEEEeccCCCc---cceEEEEEEcCCCCCCc
Q 006523 162 GHAVSADLIHWLYLPIAMVPDQ------WY-DINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (642)
Q Consensus 162 GHA~S~DLvhW~~~p~AL~Pd~------~~-D~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~d~ll 231 (642)
--+.|+||+||+...-.|.+.. .+ +..|||..++. .+||+++|+||-..... ....+..++++..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 4577999999998775444432 22 46789999986 79999999997654221 11123333332211
Q ss_pred eeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCC------eeEEEEEEeCCCCCCEEccc----ccc
Q 006523 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK------TGISLVYQTTDFKTYELLDE----YLH 301 (642)
Q Consensus 232 ~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~------~G~~~lY~S~Dl~~W~~~~~----l~~ 301 (642)
-.|.. |+..+-. .--||.+++ +++|+-+|+.|+.... .|+ +++-.|-..-++.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w~~~~~~~~~~~i--~l~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSWDGGIFMHSFAGI--ILQEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEecccCCCcccccccce--eeeeccccccccCCccceeEec
Confidence 35654 4443221 134999965 6889988998875321 133 333333333333333 222
Q ss_pred cCCCCCceeeeceEEec
Q 006523 302 AVPGTGMWECVDFYPVA 318 (642)
Q Consensus 302 ~~~~~gmWECPdlf~l~ 318 (642)
. .+.+.-|-|-+++-+
T Consensus 200 G-~~~~~~EGPhl~k~~ 215 (549)
T COG3507 200 G-GNGGLTEGPHLYKKT 215 (549)
T ss_pred c-CCCccccCceeeccC
Confidence 1 112356888777664
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.25 Score=50.72 Aligned_cols=172 Identities=15% Similarity=0.257 Sum_probs=91.9
Q ss_pred eeeeecCCCCc--cCCccceEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccCCCCCccCCCCeEeeeEE-
Q 006523 120 SFHFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT- 196 (642)
Q Consensus 120 ~yHf~P~~gwm--NDPnG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav- 196 (642)
.--.+|..||. -||. .++++|+||+|......+.. ||...-.-+-+|.+..-| +-..-+. +.-...++
T Consensus 13 g~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~-----y~sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFY 83 (271)
T PF03664_consen 13 GPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGG-----YGSMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFY 83 (271)
T ss_pred CccccCCCCceeccCce-EEeECCEEEEEEEeccCCCc-----cceEeeeccCCHHHhhcc--ccccCCc-ccccceEEE
Confidence 33456888985 6998 99999999999987755444 444444456677665432 1111111 11111221
Q ss_pred EccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecC-CCCCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 006523 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (642)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~~g~w~MviGa~ 275 (642)
..+...+||.|--... .-....+.|..+| ..|... .|+... ..+ .....-|..|+-. ...+ ||....
T Consensus 84 FaPk~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~D-~~n~-yLFfa~- 151 (271)
T PF03664_consen 84 FAPKNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVICD-DTNM-YLFFAG- 151 (271)
T ss_pred ecCCcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEec-CCce-EEEEcC-
Confidence 2467778888852211 1123345677666 358764 455432 111 1234578988642 3334 444432
Q ss_pred cCCeeEEEEEEeCC-CCCCEEccccc------ccCCCCCceeeeceEEec
Q 006523 276 IGKTGISLVYQTTD-FKTYELLDEYL------HAVPGTGMWECVDFYPVA 318 (642)
Q Consensus 276 ~~~~G~~~lY~S~D-l~~W~~~~~l~------~~~~~~gmWECPdlf~l~ 318 (642)
+ .|. ||+|.- +-++ .+.+. .........|-++.|+|.
T Consensus 152 D--nGk--iYRs~~~i~nF--P~~fgs~~~vvmsd~~~nLFEA~~VYkv~ 195 (271)
T PF03664_consen 152 D--NGK--IYRSSMPIGNF--PGGFGSSYTVVMSDTRNNLFEAVQVYKVK 195 (271)
T ss_pred C--CCc--EEEeccchhhC--CCCCCCceEEEEecCccceeeeeEEEEEc
Confidence 2 254 688753 2222 12221 111123479999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.33 Score=49.99 Aligned_cols=146 Identities=16% Similarity=0.080 Sum_probs=78.9
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEeccCCCc---
Q 006523 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS--- 214 (642)
Q Consensus 141 G~YHLFYQ~nP~~~~wG~~~WGHA~S--~DL-vhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~--- 214 (642)
|+...|+.- +...+.....-.+| +|. .+|...-....+. -....+..++++.+++|+++|+|+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455566655 33334444444555 985 7898754333332 123467777777778999999995443221
Q ss_pred cceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEEEEeeecCCeeEEEEEEeC-CCCCC
Q 006523 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT-DFKTY 293 (642)
Q Consensus 215 ~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~MviGa~~~~~G~~~lY~S~-Dl~~W 293 (642)
.......+|.|+| ++|.... .|...+........+.+-+ -. .+|++++..-........+.++.|+ +.+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i-~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPI-QL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEE-EE-CTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeee-Ee-cCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238899975 8999863 3322211111112233323 22 5888877632222223445555555 57999
Q ss_pred EEcccc
Q 006523 294 ELLDEY 299 (642)
Q Consensus 294 ~~~~~l 299 (642)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 987654
|
... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.23 Score=52.52 Aligned_cols=142 Identities=12% Similarity=0.160 Sum_probs=77.2
Q ss_pred CCccceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccc---eEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEE
Q 006523 132 DPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (642)
Q Consensus 132 DPnG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvh---W~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~ 206 (642)
-|. ++|+ +++|+||||+.+ ...++|+|..+ |....+.......-...|...-.+ +.+|+++|||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLf 148 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLF 148 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEE
Confidence 565 6655 599999999732 45899999665 754332222211112234455555 5779999999
Q ss_pred EeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCC--eEEEEEeeecCCeeE-EE
Q 006523 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTGI-SL 283 (642)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g--~w~MviGa~~~~~G~-~~ 283 (642)
+.+... .+..|.... .+|-....+++....+.-...-|--|.| .+ .+| +|+|++-+.....++ ..
T Consensus 149 f~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfr 216 (303)
T cd08987 149 FSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFR 216 (303)
T ss_pred EecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEE
Confidence 987532 233443222 1222211223222111111245667888 54 445 999999775321122 22
Q ss_pred EEEeCCCC-CCEEc
Q 006523 284 VYQTTDFK-TYELL 296 (642)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (642)
-++|+.|. .|+..
T Consensus 217 s~Ts~Sl~GpWt~~ 230 (303)
T cd08987 217 SWTATSLDGPWTPL 230 (303)
T ss_pred EEEcCCCCCCceec
Confidence 36777764 68866
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.08 Score=56.19 Aligned_cols=134 Identities=15% Similarity=0.180 Sum_probs=73.1
Q ss_pred CCCccCCccceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccceEEcCccC----CCCCccC----------CCCeE
Q 006523 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM----VPDQWYD----------INGVW 191 (642)
Q Consensus 127 ~gwmNDPnG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL----~Pd~~~D----------~~Gv~ 191 (642)
..+.-||+ ++.+ +|+.+|+|-..- ++ .-|+---+.|+..-.-.+..+ .|+..|. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~~----~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCSN----NY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecCC----CC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 35667997 5555 599999984211 11 123333344433211111111 1111111 23466
Q ss_pred eeeEEEccCCcEEEEEeccCCC-ccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEEEeCCCCeEEE
Q 006523 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (642)
Q Consensus 192 SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~M 270 (642)
-|..+...+|+++|+|++.... ..-.+.+|+|++. +--|++...|||+..+.+. ...--...+ ....+|+|++
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888777899999999865322 2235678888764 3467776678988643221 011123334 3457788888
Q ss_pred EE
Q 006523 271 TI 272 (642)
Q Consensus 271 vi 272 (642)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 75
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.27 Score=52.34 Aligned_cols=137 Identities=21% Similarity=0.298 Sum_probs=86.8
Q ss_pred cccccccccceeeeecCCCCccCCccc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccceEEcC---ccCC
Q 006523 110 TNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IAMV 180 (642)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gwmNDPnG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHA~S-~DLvhW~~~p---~AL~ 180 (642)
|..++.|++...=+.|.. + .|.+|+ +.+++.+|+||.-+-.. +...-..|+| .|.+||+..+ +.|.
T Consensus 45 S~Dlv~W~~~~~aL~P~~-~-~d~~g~~SGs~~~~~~~~~~~YTg~~~~---~~~~q~~A~s~d~~~~w~k~~~~~pvi~ 119 (308)
T PF00251_consen 45 SKDLVHWEHLPVALPPDE-E-YDADGCFSGSAVVDDDNLVLFYTGNNRD---GKQVQCLAYSTDDGITWTKYPQGNPVIP 119 (308)
T ss_dssp ESSSSSEEEEEEEE-SSS-G-GGTTEEEEEEEEEETTCEEEEEEEEETT---TEEEEEEEEESSTTSSEEE-TTTCESBE
T ss_pred CCCCCCceeCCceEcccc-c-CCcCccCcceEEEECCEEEEEEeccCCC---CCeEEEEEEECCCCCceEEcCCCCcEEE
Confidence 456778877765566664 3 477773 33678999999866442 1345678999 8899998843 3443
Q ss_pred CCCccCCCCeEeeeEEEccCCcEEEEEeccCCCccceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEE
Q 006523 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (642)
Q Consensus 181 Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (642)
.....+..+.-...++...+|+++|+..+... ......+..|+| |++|+.. .++...... ....+--|.++
T Consensus 120 ~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~--~~l~~~~~~-~g~~~ECPdlf 190 (308)
T PF00251_consen 120 EPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDD-----LIHWEYL--GPLFIPGDN-GGGMWECPDLF 190 (308)
T ss_dssp SSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESS-----SSSEEEE--EEESEEETT-TSSEEEEEEEE
T ss_pred ecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCC-----cccCcee--Ccccccccc-cccccccceEE
Confidence 21222567788999866778999998876654 344566777877 4899886 344432211 11334456663
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=94.35 E-value=7.4 Score=41.68 Aligned_cols=146 Identities=15% Similarity=0.168 Sum_probs=82.7
Q ss_pred CcEEEEEEecC-ccceEEcCccCCCCCccCCCCeEeeeEEEccCCcEEEEEeccCCC----------ccceEEEEEEcCC
Q 006523 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (642)
Q Consensus 158 ~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 226 (642)
.+...-+.|.| ...|.... ++..... ....++.++.+++.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 46667788887 68998753 3333322 2356788888875559999999876421 2345678889887
Q ss_pred CCCCceeEEEcCCCceecCC--CCCCCCCCCCC--EEEEeCCCCeEEEEEeeecC--CeeEEEEEEeCCCCCCEEccccc
Q 006523 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDP--TTAWAGPDGKWRLTIGSKIG--KTGISLVYQTTDFKTYELLDEYL 300 (642)
Q Consensus 227 ~d~ll~~w~K~~~nPVl~~p--~g~~~~~fRDP--~V~w~~~~g~w~MviGa~~~--~~G~~~lY~S~Dl~~W~~~~~l~ 300 (642)
+ .+|.+. ..+.... ..+ ...++-| -+. -.+|+++|.+-.... ..-..++|..++.++|+.....
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~- 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV- 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-
Confidence 5 899863 1222111 011 1112233 221 247888777644322 1223445555668999864322
Q ss_pred ccCCCCCceeeeceEEec
Q 006523 301 HAVPGTGMWECVDFYPVA 318 (642)
Q Consensus 301 ~~~~~~gmWECPdlf~l~ 318 (642)
.. ..++.| |.+++++
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 134566 5677885
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=90.11 E-value=1.3 Score=47.68 Aligned_cols=89 Identities=26% Similarity=0.483 Sum_probs=49.7
Q ss_pred eeEEEccCCcEEEEEeccCCCcc-ceEEEEEEcCCCCCCceeEEEcCCCceecCCCCCCCCCCCCCEEE-EeCCCCeEEE
Q 006523 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (642)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~d~ll~~w~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~~g~w~M 270 (642)
||.|+.+||.+++=-.+..+... .+-.+-||.|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44456679998877676655544 366788999864 799864321 12456899987 5 4778777
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCCEE-cccc
Q 006523 271 TIGSKIGKTGISLVYQTTDF-KTYEL-LDEY 299 (642)
Q Consensus 271 viGa~~~~~G~~~lY~S~Dl-~~W~~-~~~l 299 (642)
+. ++.+ |.-.+|+|.|. ..|+. ++.|
T Consensus 189 ~~-~c~~--g~rrVYeS~DmG~tWtea~gtl 216 (310)
T PF13859_consen 189 MT-ACDD--GRRRVYESGDMGTTWTEALGTL 216 (310)
T ss_dssp EE-E-TT--S---EEEESSTTSS-EE-TTTT
T ss_pred EE-eccc--ceEEEEEEcccceehhhccCcc
Confidence 64 3332 55568999885 78987 4443
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.54 E-value=4 Score=41.38 Aligned_cols=109 Identities=26% Similarity=0.493 Sum_probs=68.4
Q ss_pred CccCCccceEECCE-EEEEEeeCCCCCCCCCcEEEEEEecCccceEE--cCccC-CCCCccCCCCeE--eeeEEEccCCc
Q 006523 129 WMNDPNGPLFYKGW-YHLFYQYNPDSAVWGNITWGHAVSADLIHWLY--LPIAM-VPDQWYDINGVW--TGSATILPDGQ 202 (642)
Q Consensus 129 wmNDPnG~~y~~G~-YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~--~p~AL-~Pd~~~D~~Gv~--SGSavv~~dG~ 202 (642)
+.=|-. .++|+|+ |+++-|-.|. .-|+.....|.-.+- |+- .|+-| .|.-+|+..|.| -|-||+..+|+
T Consensus 131 fsldat-tfeh~gk~yyvwaqkdp~--i~gnsniyiaemenp--wtikgepvmlskpe~dwe~~gfwvnegpav~k~ngk 205 (324)
T COG3940 131 FSLDAT-TFEHNGKLYYVWAQKDPN--IKGNSNIYIAEMENP--WTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGK 205 (324)
T ss_pred ceeeee-eeeeCCEEEEEEeccCCC--ccCCcceEEEeccCC--ceecCceEEecCCCcccEEEEEEecCCceEEEECCE
Confidence 333443 5677876 8888898886 345555556655543 554 34444 344466777866 68888889999
Q ss_pred EEEEEeccCCCccceEEEEEE---cCCCCCCceeEEEcCCCceecC
Q 006523 203 IVMLYTGSTDKSVQVQNLAYP---ADPSDPLLLDWVKYPGNPVLVP 245 (642)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S---~D~~d~ll~~w~K~~~nPVl~~ 245 (642)
+.+-|.....+-.-..+|-.. .|.-|| .+|+|. ..||+..
T Consensus 206 ifi~ysasatd~nycmgllwanen~dlldp--aswtks-ptpvf~t 248 (324)
T COG3940 206 IFITYSASATDVNYCMGLLWANENSDLLDP--ASWTKS-PTPVFKT 248 (324)
T ss_pred EEEEEeccccccceeeeeeeecccCCcCCc--hhcccC-CCcceee
Confidence 999999875432223333333 233344 489996 4788864
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=85.22 E-value=17 Score=39.22 Aligned_cols=157 Identities=20% Similarity=0.200 Sum_probs=86.7
Q ss_pred cCCccceEECCEEEEEEeeCCC-CC---CCCCcEEEEEEecC-ccceEEcCccCCCCCccCCCCe------EeeeEEEcc
Q 006523 131 NDPNGPLFYKGWYHLFYQYNPD-SA---VWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATILP 199 (642)
Q Consensus 131 NDPnG~~y~~G~YHLFYQ~nP~-~~---~wG~~~WGHA~S~D-LvhW~~~p~AL~Pd~~~D~~Gv------~SGSavv~~ 199 (642)
==|++.|-.+|+-+|.|...-. ++ .|....=+.+.|.| ..+|+..|..+.+...+- .|+ |.=++....
T Consensus 95 ~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~ 173 (316)
T PF13810_consen 95 VIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKD 173 (316)
T ss_pred EcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCC
Confidence 3478888888998888875421 11 23222346788999 889999986555543111 121 222233346
Q ss_pred CCcEEEEEeccCCCccceEEEEEE--cCCCCCC------cee--EEEcC--CCceecCCCCCCCCCCCCCEEEEeCCCCe
Q 006523 200 DGQIVMLYTGSTDKSVQVQNLAYP--ADPSDPL------LLD--WVKYP--GNPVLVPPRHIGPKDFRDPTTAWAGPDGK 267 (642)
Q Consensus 200 dG~~~~~YTG~~~~~~q~q~lA~S--~D~~d~l------l~~--w~K~~--~nPVl~~p~g~~~~~fRDP~V~w~~~~g~ 267 (642)
||-+|+|=|...+. ....||.- ++..|+. ... |.+.. ..||+..+ +---+|.|.+..|+
T Consensus 174 dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~~~gk 244 (316)
T PF13810_consen 174 DGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNEYLGK 244 (316)
T ss_pred CCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeCCCCE
Confidence 77677766655432 22334432 1211110 012 65432 13666533 22346778777899
Q ss_pred EEEEEeeecCCeeEEEEEEeCCCC-CCEEcccc
Q 006523 268 WRLTIGSKIGKTGISLVYQTTDFK-TYELLDEY 299 (642)
Q Consensus 268 w~MviGa~~~~~G~~~lY~S~Dl~-~W~~~~~l 299 (642)
|+|+.... ..+.|.+.++++.. .|.....+
T Consensus 245 ~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l 275 (316)
T PF13810_consen 245 WVLSYFDA--GTGGIVLRTAPSPTGPWSEPKPL 275 (316)
T ss_pred EEEEEecc--cCCcEEEEecCCCCCCCCCCeeE
Confidence 99998642 23567777777776 47644343
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 642 | ||||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 0.0 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-133 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-133 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-133 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-132 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-132 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-132 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-129 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-129 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 6e-36 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 2e-35 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 7e-31 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 6e-30 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 2e-21 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 2e-21 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 6e-21 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 6e-21 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 2e-20 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 1e-07 |
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 642 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 0.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 0.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 0.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-174 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-166 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-161 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 1e-130 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 7e-16 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 7e-12 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 6e-11 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 1e-10 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 2e-10 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 1e-08 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 2e-07 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 1e-04 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 2e-04 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 726 bits (1876), Expect = 0.0
Identities = 343/538 (63%), Positives = 426/538 (79%), Gaps = 6/538 (1%)
Query: 106 SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAV 165
Y W+NA +WQRT+FHFQPE++WM+DP+GP+FYKGWYH FYQYNPD+ VWGN TWGH V
Sbjct: 7 PYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTV 66
Query: 166 SADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPAD 225
S DLIHWLYLP+A+ DQWYD+ GV++GSAT LPDG+I+MLYTG T + V++ +LAYPAD
Sbjct: 67 SRDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPAD 126
Query: 226 PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285
SDPLL++WVKYPGNP+L P + P +FRD +T W +G WR+ IG+K TGI++VY
Sbjct: 127 LSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVY 186
Query: 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345
+T DFK+++LL+E LHAVP TG+WECVD YPV+ G GL+TS GP +KHVLKAS+D+
Sbjct: 187 ETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQ 246
Query: 346 KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINET 405
+ D+YAIGTY+ +KWTPDNPEEDVGIGL++D+G+YYASK+FYDP K+RR+VW W E
Sbjct: 247 QRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKEL 306
Query: 406 DTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVV 465
D+E D EKGWA+VQTIPRTVL D KTG+NV+ WPVEE+ESLR +S F +V GSVV
Sbjct: 307 DSEVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVV 366
Query: 466 PLDIGVATQLDISAEFE---TELLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSL 520
PLD+G ATQLDI AEFE L G+ + GY C SGGA +R +GPFGLLV+A ++L
Sbjct: 367 PLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENL 426
Query: 521 SELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDH 579
SE TP++F + T G T+FC DE+RSS A DV KQV G VPVL GEK +MR+LVDH
Sbjct: 427 SEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTMRLLVDH 486
Query: 580 SIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHPF 637
SIVESF QGGR+ ITSR+YPT+AIYGAA+LFLFNNATG ++ A+LKIW +NSAFI PF
Sbjct: 487 SIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSAFIQPF 544
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 680 bits (1755), Expect = 0.0
Identities = 251/541 (46%), Positives = 336/541 (62%), Gaps = 17/541 (3%)
Query: 110 TNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL 169
+ ++ RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 170 IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDP 229
I+W P A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 230 LLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT 287
L +W K P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y +
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 288 TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP---GIKHVLKASLDD 344
DF +E E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
TK D+Y IGTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTV-FEEVVVEPGS 463
+ + DD+EKGW+ +QTIPR + D ++G ++QWPV E+E LR V++ GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 464 VVPLDIGVATQLDISAEFE------TELLGSGAMEEGYGCS-GGAIDRSAMGPFGLLVNA 516
+ + A Q D+ F+ +++ + CS +S +GPFGL+V A
Sbjct: 360 RLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLA 419
Query: 517 HDSLSELTPIFFRSSNTTKGTNTY---FCADETRSSLAPDVFKQVHGSKVPVLQGEKLSM 573
+L E T ++FR + +N Y C+D++RSSL D K +G+ V + + LS+
Sbjct: 420 SKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQPLSL 479
Query: 574 RILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAF 633
R L+DHS+VESFG GR ITSR+YP AI ++ LF FN L W +NSA
Sbjct: 480 RALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 539
Query: 634 I 634
I
Sbjct: 540 I 540
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 678 bits (1752), Expect = 0.0
Identities = 237/537 (44%), Positives = 332/537 (61%), Gaps = 15/537 (2%)
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP +A +G+ I WGHAVS DL+
Sbjct: 2 QIEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLV 61
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPL 230
+W++L A+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP
Sbjct: 62 NWIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPF 121
Query: 231 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290
L +WVK+P NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF
Sbjct: 122 LREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 291 KTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350
++ D+ L + TG WEC DFYPV +N + GLDTS G ++HV+KA + D Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWY 239
Query: 351 AIGTYNPANDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTE 408
IGTY+P + + P N G + L++DYG++YASKSF+D K RR++W W+ ETD++
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 409 SDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+DD+EKGWA +Q+ PR + D + G ++QWPVEEIE LRQN + ++PGSV+ +
Sbjct: 300 ADDIEKGWAGLQSFPRALWID-RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIH 358
Query: 469 IGVATQLDISAEFETE-------LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLS 521
A+Q D++ F+ E L + + GA R A+GPFGLL A L
Sbjct: 359 GIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLK 418
Query: 522 ELTPIFFRSSNTTKGT-NTYFCADETRSSLAPDVFKQVHGSKVPV-LQGEKLSMRILVDH 579
E + IFFR G + C+D +RS++ ++ +G+ V + + E++S+R L+DH
Sbjct: 419 EQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDH 478
Query: 580 SIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHP 636
SI+ESFG GG+T ITSRIYP A LF+FNN T + + W + +A
Sbjct: 479 SIIESFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVV 535
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 565 bits (1457), Expect = 0.0
Identities = 122/555 (21%), Positives = 205/555 (36%), Gaps = 80/555 (14%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL 175
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW
Sbjct: 6 PYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEK 65
Query: 176 PIAMVPDQWYD--INGVWTGSATILPDG----------QIVMLYTG------------ST 211
P+A++ + ++GSA + +V +YT +
Sbjct: 66 PVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTV 125
Query: 212 DKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVPPRH---IGPKDFRDPTTAWAGPDGK 267
+ Q Q++AY D L W Y NPV+ P ++FRDP W K
Sbjct: 126 QEDQQSQSIAYSLDD----GLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQK 181
Query: 268 WRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDT 327
W + I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 182 WVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS------ 233
Query: 328 SATGPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG 380
G K V+ + L+ Y +G ++ D D+G
Sbjct: 234 ---GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWG 290
Query: 381 R-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQ 438
+YA+ + + GW+N ++ W S IPR + L + + +VQ
Sbjct: 291 PDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQ 350
Query: 439 WPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCS 498
P E S+ ++ + F
Sbjct: 351 QPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSA--------------- 395
Query: 499 GGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQV 558
+S F + + A + +E T + + + + + + F V
Sbjct: 396 -----KSKASTFAIALRASANFTEQTLVGYDFAKQQ----IFLDRTHSGDVSFDETFASV 446
Query: 559 HGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGV 618
+ + + + I VD S VE FG G T +T++I+P+ A L +
Sbjct: 447 YHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSS---DAVHARLASTGGTT 503
Query: 619 NVKATLKIWRLNSAF 633
I+++ S +
Sbjct: 504 EDV-RADIYKIASTW 517
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 533 bits (1374), Expect = 0.0
Identities = 126/565 (22%), Positives = 209/565 (36%), Gaps = 91/565 (16%)
Query: 98 HLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWG 157
+ G + A R S+HF P++ WMN+PNG + +HLF+Q+NP + VWG
Sbjct: 9 MVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWG 68
Query: 158 NITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG----------QIVMLY 207
NI WGHA S DL+HW + P A+ + + +TG+A P+ + +
Sbjct: 69 NICWGHATSTDLMHWAHKPTAIADENGVEA---FTGTAYYDPNNTSGLGDSANPPYLAWF 125
Query: 208 TGSTDKS-VQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAW 261
TG T S Q Q LA+ D W K+ GNP++ P G + RDP +
Sbjct: 126 TGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFF 181
Query: 262 AGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPG-----TGMWECVDFYP 316
G W + + G + + D + + WE D +
Sbjct: 182 HRQSGNWIMVLAH--GGQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFE 239
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVD-----HYAIGTYNPANDKWTPDNPEEDV 371
+ + G+ V+ + + G+++ + P +
Sbjct: 240 LPVEGT---------EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPVDAS--- 287
Query: 372 GIGLKWDYG-RYYASKSFYD--PYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-L 427
+ D G + + S+ + RRI+ +N + W + + PRT+ L
Sbjct: 288 --TMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSL 343
Query: 428 YDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLG 487
T + VQ P+ E++++ + + + PG + I T LD+ F
Sbjct: 344 KKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTLLSSIR-GTALDVRVAFYP---- 398
Query: 488 SGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETR 547
A L V SE T I + S+ T D T
Sbjct: 399 -----------------DAGSVLSLAV--RKGASEQTVIKYTQSDAT------LSVDRTE 433
Query: 548 SSLAP--DVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYG 605
S VH +K+ +S+R+LVD VE FG G VI+ I+P+ + G
Sbjct: 434 SGDISYDPAAGGVHTAKLEEDGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDG 493
Query: 606 AARLFLFNNATGVNVKATLKIWRLN 630
A NA + + + ++
Sbjct: 494 LALEVTGGNAVLQS----VDVRSVS 514
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 523 bits (1349), Expect = 0.0
Identities = 125/533 (23%), Positives = 203/533 (38%), Gaps = 67/533 (12%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+H W+NDPNG FYKG +H+FYQ +P WG + WGH S D+++W PI
Sbjct: 40 YPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPI 99
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG--------STDKSVQVQNLAYPADPSDP 229
P + +GV++GSA I +G + YTG +T QVQ A P +
Sbjct: 100 MFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE-- 157
Query: 230 LLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTT 288
++ P +RDP W +T G K G ++ +
Sbjct: 158 ---LTSATKQGMIIDCPTDKVDHHYRDPKVWK--TGDTWYMTFGVSSADKRGQMWLFSSK 212
Query: 289 DFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVG---LDTSATGPGIKHVLKASLDD 344
D +E H P M EC DF P+ + SA G + ++ +
Sbjct: 213 DMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSN 272
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWIN 403
Y IGT+ P ++ P+ WD G YYA +SF R+IV+GW++
Sbjct: 273 A---GYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFNV--DGRQIVYGWMS 320
Query: 404 ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGS 463
+ GW T+PR + + +VV PV E+E LR+++ V ++
Sbjct: 321 PFVQPIPMEDDGWCGQLTLPREITLGDDG--DVVTAPVAEMEGLREDTLDHGSVTLDMDG 378
Query: 464 VVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSEL 523
+ A ++I + + S GL ++A
Sbjct: 379 EQIIADD-AEAVEIEMTID-------------------LAASTAERAGLKIHA-TEDGAY 417
Query: 524 TPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVE 583
T + + D + ++ + L KL +R+ VD VE
Sbjct: 418 TYVAYDGQIGR------VVVDRQAMANGDRGYRAAPLTDAE-LASGKLDLRVFVDRGSVE 470
Query: 584 SFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFIHP 636
+ GG V++S Y ++ G + L + + V + LK+ + S +
Sbjct: 471 VYVNGGHQVLSSYSYASE---GPRAIKLVAESGSLKVDS-LKLHHMKSIGLEL 519
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 504 bits (1299), Expect = e-174
Identities = 99/543 (18%), Positives = 184/543 (33%), Gaps = 86/543 (15%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+H P W+ +P P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVMP 61
Query: 181 PDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADP----- 226
+ + W+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPDFPV---WSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 227 --SDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
DP++++ G P + FRDP W G+W IG +
Sbjct: 119 ALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYAAF 171
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y + + + + L + + G EC D + + + VL AS+D
Sbjct: 172 YTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD----------DGTRHWVLAASMDA 221
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSF--YDPYKKRRIVWGW 401
+ Y W + D D+G +YA+ ++ D + +R+ W
Sbjct: 222 YGIGLPMTYAY--WTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAW 279
Query: 402 INETDTESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTVFE 455
+N + D+ G+ +I R + + G ++ PV + + +T
Sbjct: 280 MNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLP 339
Query: 456 EVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVN 515
+ V+ +V+P + +I + G+ V
Sbjct: 340 DRTVDGSAVLPWN---GRAYEIELDIA---------------------WDTATNVGISVG 375
Query: 516 AHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPV-LQGEKLSMR 574
+ T I D S LA + P+ + +R
Sbjct: 376 RSPDGTRHTNIGKY--------GADLYVDRGPSDLAGYSLAPYSRAAAPIDPGARSVHLR 427
Query: 575 ILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 634
ILVD VE F G TV++ +++ + G + L+ + + + + + A +
Sbjct: 428 ILVDTQSVEVFVNAGHTVLSQQVHFAE---GDTGISLYTDGGPAHFTG-IVVREIGQAIL 483
Query: 635 HPF 637
Sbjct: 484 EHH 486
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 485 bits (1249), Expect = e-166
Identities = 105/544 (19%), Positives = 198/544 (36%), Gaps = 72/544 (13%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHW 172
+ R HF PEK WMNDPNG + K +HL++QYNP++ WG + WGHA S DL+HW
Sbjct: 8 YNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHW 67
Query: 173 LYLPIAMVPDQWYDINGVWTGSATILPDG-------------QIVMLYTGSTDKSVQVQN 219
IA+ P+ +D G+++GS + + +IV +YT + + Q Q+
Sbjct: 68 DEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQD 124
Query: 220 LAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
+A+ D + KY NPV+ FRDP W +W + + +
Sbjct: 125 IAFSLDGG----YTFTKYENNPVIDVS----SNQFRDPKVFWHEDSNQWIMVVSK--SQE 174
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339
++ + + K + L + G +EC V I K V+
Sbjct: 175 YKIQIFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIEN---------SDKSKWVMF 224
Query: 340 ASL-----DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYK 393
++ ++ Y +G ++ ++ PD+ + D G+ +YA ++F + +
Sbjct: 225 LAINPGSPLGGSINQYFVGDFD--GFQFVPDDSQ-----TRFVDIGKDFYAFQTFSEV-E 276
Query: 394 KRRIVWGWINETDTESDDLEKGWASVQTIPRTV------LYDNKTGSNVVQWPVEEIESL 447
+ W + W S ++ R ++Q PV
Sbjct: 277 HGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSIN 336
Query: 448 RQNSTVFEEVVVEPGSVVPLDI-GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSA 506
+ + V + + + G D + F+ L + + + + ++
Sbjct: 337 VVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGKTHFDILINSQELNS 396
Query: 507 MGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVL 566
+ + S S R + F D+ + L P
Sbjct: 397 SV-DSIKIGFDSSQSSFY--IDRHIPNVEFPRKQFFTDKLAAYLEPLD---------YDQ 444
Query: 567 QGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKI 626
S+ +VD +I+E + G +T+ + + Y + + + ++ I
Sbjct: 445 DLRVFSLYGIVDKNIIELYFNDGTVAMTNTFFMGEGKYPHDIQIVTDTEEPLFELESVII 504
Query: 627 WRLN 630
LN
Sbjct: 505 RELN 508
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 468 bits (1207), Expect = e-161
Identities = 134/526 (25%), Positives = 215/526 (40%), Gaps = 105/526 (19%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS-----VQVQNLAYPADPSDPLLL 232
A+ PD + +GV++GSA + DG++ ++YT D + + Q + + L
Sbjct: 63 ALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----GL 114
Query: 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFK 291
D+VKY GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D
Sbjct: 115 DFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLF 172
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
++ + T +C D + G K +L S+ T ++
Sbjct: 173 HWKYEGA-IFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFS 216
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES- 409
+G K + D+G +YA+++F+ R +V GW+
Sbjct: 217 MGELKE--GKLNVEKRGL-------LDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGL 265
Query: 410 -DDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+GW V ++PR + +N + PV+E+ +LR+ +V S L
Sbjct: 266 YPTKREGWNGVMSLPRELYVENN---ELKVKPVDELLALRKR-----KVFETAKSGTFLL 317
Query: 469 IGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFF 528
+I EF E L + +E +
Sbjct: 318 DVKENSYEIVCEFSGE-------------------------IELRMG-----NESEEVVI 347
Query: 529 RSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQG 588
S D TRS ++ + K V +R +D VE F
Sbjct: 348 TKSRDE------LIVDTTRSGVSGGEVR-----KSTVEDEATNRIRAFLDSCSVEFFFND 396
Query: 589 GRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 634
+ RI+P L + +N + L+++ L + ++
Sbjct: 397 S-IAFSFRIHPENV---YNILSVKSN------QVKLEVFELENIWL 432
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 396 bits (1017), Expect = e-130
Identities = 92/634 (14%), Positives = 180/634 (28%), Gaps = 133/634 (20%)
Query: 111 NAMFTWQRTSFHFQPEKNWMNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSAD 168
N +F R H P + + DP G +H+ + ++ D A +A+
Sbjct: 20 NTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IAGATTAN 72
Query: 169 LIHWLYL----PIAMVPDQWYDINGVWTGSAT-ILPDGQIVMLYTGSTD----------K 213
L + + P D V+ G+ + + +LYT + +
Sbjct: 73 LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTR 132
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDP--------------- 257
+ Q+LA + + K PV+ P + FR P
Sbjct: 133 GSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLD 188
Query: 258 -------------TTAWAGPDGKWRLTIGSKIGKTGISLV------YQTTDFKTYELLDE 298
W + W + + + G + ++F+ +E L E
Sbjct: 189 EEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGE 248
Query: 299 YLHAVPGTG-------------MWECVDFYPVAINGSVGLDTS---ATGPGIKHVLKASL 342
+ + +E + + G G +
Sbjct: 249 WWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVPQ 308
Query: 343 DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPY--------- 392
+ D + E + D+G YA+ P
Sbjct: 309 VSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSAVSKTSG 368
Query: 393 --KKRRIVWGWINETDTESDDL----EKGWASVQTIPRTV--------LYDNKTGSNVVQ 438
R + + W+ E D ++GW +PR + + + V
Sbjct: 369 VEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVS 428
Query: 439 WPVEEIESLRQN-----STVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEE 493
W V E ++ T+ E + + L +A S
Sbjct: 429 WVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSPSSKFFV 488
Query: 494 -GYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAP 552
A RS+ G + A S E T I+++ SN + D +++S A
Sbjct: 489 LTAQLEFPASARSSPLQSGFEILA--SELERTAIYYQFSNES------LVVDRSQTSAAA 540
Query: 553 DVFKQVHGSKVP------------VLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600
+ Q E L + ++VD+++VE + GR +++
Sbjct: 541 PTNPGLDSFTESGKLRLFDVIENGQEQVETLDLTVVVDNAVVEVYA-NGRFALSTWARSW 599
Query: 601 KAIYGAARLFLFNNATGVNVKATLKIWR-LNSAF 633
+ ++ F+N G + + L +A+
Sbjct: 600 YD--NSTQIRFFHNGEGEVQFRNVSVSEGLYNAW 631
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 79.2 bits (194), Expect = 7e-16
Identities = 52/383 (13%), Positives = 102/383 (26%), Gaps = 40/383 (10%)
Query: 45 SAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVA--EGVSAKSNSHLLRN 102
IF LV+ + + P + + G+ +SA S L
Sbjct: 7 FLIFAAVLVSACNSPKTTKEMKSTDDCPEKVTFTPEQIDHLGITDTNHLSAASKRALKWP 66
Query: 103 IKGSYNWTNAMFTWQRTSFHFQPEKN-WMNDPNGPLFYKGWYHLFYQYNPDSAV------ 155
W Q E+ DP+ + G Y+++Y +
Sbjct: 67 TDLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDI 126
Query: 156 -------WGNITWGHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVML 206
W +A S D W A+ YD V+T + + + +
Sbjct: 127 EKDKVFPWDRCDIWYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLC 185
Query: 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266
Y +D W K + + + +D D
Sbjct: 186 YQTVKSPYNVRVKNQVGLAWADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDF 245
Query: 267 KWRLTIGSKI----GKT----GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
I GK + + F ++ A G + + P++
Sbjct: 246 DSHKVHDPCIIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPIS 305
Query: 319 INGS----------VGLDTSATGPGIKHVLKASLD--DTKVDHYAIGTYNPANDKWTPDN 366
+G + + GP K+ ++ + D + ++ G A +
Sbjct: 306 NSGHEICVWPYNGGIASLITTDGPE-KNTIQWAPDGINFEIKSVIPGVNAHAIGLNRTAD 364
Query: 367 PEEDVGIGLKWDYGRYYASKSFY 389
E++ L+W Y + +
Sbjct: 365 VEKEPTEILRWGLTHIYNNGDYQ 387
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 7e-12
Identities = 38/233 (16%), Positives = 64/233 (27%), Gaps = 35/233 (15%)
Query: 63 PLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFH 122
P S + + A+ + + L +K + W N W +
Sbjct: 16 PRGSHMASNTQTIAVDDTQNYDERKADSLGIPKGNKLSAAMKRAMKWENHDNKW-FFEYK 74
Query: 123 FQPEKNWMN--------DPNGPLFYKGWYHLFYQY-------------NPDSAVWGNITW 161
+P K + DP+ L Y+++Y W
Sbjct: 75 MEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDI 134
Query: 162 GHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSV 215
+A S D + W IA+ YD V+T + G+ + Y T +
Sbjct: 135 WYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVK 193
Query: 216 QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268
+A P W PVL P G + + G +
Sbjct: 194 NTIGMACADSPEGL----W-TKTDKPVL-EPSDTGEWEGDEDNRFKVVSKGDF 240
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 6e-11
Identities = 56/366 (15%), Positives = 99/366 (27%), Gaps = 87/366 (23%)
Query: 100 LRNIKGSY-NWTNAMFTWQRTSFHFQPEKNWM--------NDPNGPLFYKGWYHLFYQY- 149
LR I+ Y F P K + DP+ L YH++Y
Sbjct: 15 LRAIERGYDEKGPEWLF----EFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKG 70
Query: 150 ------------NPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSA 195
W HA S D I W + A+ YD V+T
Sbjct: 71 EGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEV 130
Query: 196 TILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251
+G ++Y ++S++ +AY P P W P+L P + G
Sbjct: 131 LRH-NGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGP----W-TKSDAPIL-SPENDGV 183
Query: 252 KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
D + G + ++ D + + G M E
Sbjct: 184 WDTDEDNRFLVKEKGSF--------------DSHKVHDPCLMFFNNRFYLYYKGETMGES 229
Query: 312 VDFYPVAINGSVGLDTSATGPGIKH----VLKASLDDTKVDH------------------ 349
++ I V + S GP K + + + +
Sbjct: 230 MNMGGREIKHGVAIADSPLGPYTKSEYNPITNSGHEVAVWPYKGGMATMLTTDGPEKNTC 289
Query: 350 ------------YAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRI 397
I A + P++ +D G++W Y + ++ +
Sbjct: 290 QWAEDGINFDIMSHIKGAPEAVGFFRPESDSDDPISGIEWGLSHKYDASWNWNYLCFFKT 349
Query: 398 VWGWIN 403
++
Sbjct: 350 RRQVLD 355
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 63.0 bits (152), Expect = 1e-10
Identities = 50/299 (16%), Positives = 80/299 (26%), Gaps = 38/299 (12%)
Query: 132 DPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
+ +G Y G++ +F + + + W +D
Sbjct: 66 NADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDA 125
Query: 188 NGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAY----------------P 223
N W+GSAT DG+I + YT + K Q L
Sbjct: 126 NDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGV 185
Query: 224 ADPSDPLLLDWVKYPGNPVLVPPRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKTG 280
D D Y + + D RDP K+ + + + G
Sbjct: 186 EDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTGTEDG 244
Query: 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKA 340
+ Y + + NG++G+ +K V+K
Sbjct: 245 YQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKP 304
Query: 341 SLDDTKV-DHYAIGTYNPANDKW-----TPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ V D N KW + + GI Y Y S S PYK
Sbjct: 305 LIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 2e-10
Identities = 37/296 (12%), Positives = 66/296 (22%), Gaps = 43/296 (14%)
Query: 138 FYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195
+ G+ + + + + D HW + W+GSA
Sbjct: 143 NWNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGT--PVIQQWSGSA 200
Query: 196 TILPDGQIVMLYTGST--DKSVQVQNLA-----YPADPSDPLLLDWVKYPGNPVLVP--- 245
T+ DG I + YT D + Q LA + + + V
Sbjct: 201 TLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGY 260
Query: 246 -----------PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYE 294
+ RD +G L + G Q + Y
Sbjct: 261 HYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYG 319
Query: 295 LLDEYLHAVPGTGMWECVDFYPVAI-NGSVGLDTS---ATGPGIKHVLKASLDDTKV--- 347
++ + N ++G+ P + V + V
Sbjct: 320 GTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYSPLISAPMVSDE 379
Query: 348 ----------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ Y + N D Y S + Y
Sbjct: 380 IERPDVVKLGNKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSDNLTHGYV 435
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 55.9 bits (134), Expect = 1e-08
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 27/215 (12%)
Query: 125 PEKNWMNDPNGPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHW------LYL 175
E++ +P Y G + Y + G+A S D IH+ +
Sbjct: 45 WEESDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFY 103
Query: 176 PIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWV 235
P + G + DG V+LYT K ++ +A D L W
Sbjct: 104 PAKDNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWT 157
Query: 236 KYPGNPVLVPPRHIGPKDFRDP---------TTAWAGPDGKWRLTIGSKIG--KTGISLV 284
K+ + + A +GK+ + G K T +L+
Sbjct: 158 KFGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLI 217
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAI 319
L + G + + P AI
Sbjct: 218 DWDPLLDENGELLKLFSPRSGYFDSQLTECGPPAI 252
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 2e-07
Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 17/153 (11%)
Query: 135 GPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGV 190
Y G + Y + G+A S D H+ PD
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 191 WTGSA-----TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
W G + DG VM+YT ++ +A + L DW K+ P
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKHG--PAFAK 168
Query: 246 PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278
+ + + K + I GK
Sbjct: 169 AFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGK 201
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 1e-04
Identities = 22/158 (13%), Positives = 38/158 (24%), Gaps = 20/158 (12%)
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG------STDKSVQVQNLAYPA 224
Y P+ ++ N + +A L +G+IV+LY A
Sbjct: 35 TKFYCPLTK-DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATST 92
Query: 225 DPSDPLLLDWVKYPGNPVLVP-----PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
D + + PV P P DP DG + +
Sbjct: 93 D-----GTHFQREK-TPVFYPDNDSQKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHV 145
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPV 317
V + + K + +
Sbjct: 146 PRLAVATSRNLKDWTKHGPAFAKAFDGKFFNLGCKSGS 183
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 21/175 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLY--LPIAMVPDQWYDINGVWTGSATI 197
+F + P+ W G+ W Y PI + + V+ + +
Sbjct: 10 HHHMKVFTEKIPNIP-WEERPEGYT----GPVWRYSKNPI-IGRNPVPKGARVFNSAV-V 62
Query: 198 LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDF 254
+G+ V ++ + + D ++W P + P
Sbjct: 63 PYNGEFVGVFRIDHKNTRPFLHFGRSKD-----GINWEIEP-EEIQWVDVNGEPFQPSYA 116
Query: 255 RDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
DP + + +T + I + T DFKT+ L G+
Sbjct: 117 YDPRVVKI--EDTYYITFCTDDHGPTIGVGM-TKDFKTFVRLPNAYVPFNRNGVL 168
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 642 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 2e-91 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 2e-77 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 2e-43 | |
| d1y4wa1 | 164 | b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus a | 2e-24 | |
| d1uypa1 | 138 | b.29.1.19 (A:295-432) Beta-fructosidase (invertase | 1e-15 | |
| d1jfua_ | 176 | c.47.1.10 (A:) Membrane-anchored thioredoxin-like | 0.002 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 0.003 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 285 bits (729), Expect = 2e-91
Identities = 93/359 (25%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW P+
Sbjct: 8 RGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPV 67
Query: 178 AMVPDQWYDI--NGVWTGSATILPDG----------QIVMLYTG------------STDK 213
A++ + ++GSA + +V +YT + +
Sbjct: 68 ALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDGKWRL 270
Q Q++AY D L NPV+ P ++FRDP W KW +
Sbjct: 128 DQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVV 184
Query: 271 TIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSAT 330
I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 185 VTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--------- 233
Query: 331 GPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-Y 382
G K V+ + L+ Y +G ++ D D+G +
Sbjct: 234 GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDF 293
Query: 383 YASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWP 440
YA+ + + GW+N ++ W S IPR + L + + +VQ P
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 246 bits (629), Expect = 2e-77
Identities = 100/327 (30%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ + +GV++GSA DG++ ++YT D + LD+VKY
Sbjct: 63 ALY--PDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKY 119
Query: 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELL 296
GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D ++
Sbjct: 120 DGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYE 177
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+ T EC D + G K +L S+ T +++G
Sbjct: 178 GA-IFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGEL- 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES--DDLE 413
+ +V D+G +YA+++F+ R +V GW+
Sbjct: 221 --------KEGKLNVEKRGLLDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKR 270
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
+GW V ++PR + +N + P
Sbjct: 271 EGWNGVMSLPRELYVENNE---LKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 159 bits (403), Expect = 2e-43
Identities = 44/391 (11%), Positives = 101/391 (25%), Gaps = 90/391 (23%)
Query: 130 MNDPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWY 185
+ + +G Y G++ +F + + + W +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 186 DINGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADP--SDPLLLDWV 235
D N W+GSAT DG+I + YT + K Q L + L+
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 236 KYPGNPVLVPPR-----------------HIGPKDFRDP------TTAWAGPDGKWRLTI 272
+ RDP + +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 273 GSK-----------------------------------IGKTGISLVYQTTDFKTYELLD 297
G + + + ++ D+ +++
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 298 EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTY-- 355
+ + T E + + + NG L T K ++D + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 356 NPANDKWTPDNPEE-DVGIGLKWDYGRY-YASKSFYDPYKKRRIVWGWINETDTESDDLE 413
N + P N + + L + + Y+ + ++ ++ D +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRG-FYADKQ 407
Query: 414 KGWA-----SVQTIPRTVLYDNKTGSNVVQW 439
+A +++ +V+ D+ +
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDSILEQGQLTV 438
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 164 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 97.7 bits (243), Expect = 2e-24
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 12/131 (9%)
Query: 504 RSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAP--DVFKQVHGS 561
+S F + + A + +E T + + + D T S + F V+
Sbjct: 43 KSKASTFAIALRASANFTEQTLVGYDFAKQQ------IFLDRTHSGDVSFDETFASVYHG 96
Query: 562 KVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVK 621
+ + + I VD S VE FG G T +T++I+P+ A L +
Sbjct: 97 PLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSS---DAVHARLASTGGTTEDV 153
Query: 622 ATLKIWRLNSA 632
I+++ S
Sbjct: 154 -RADIYKIAST 163
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 138 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 71.9 bits (176), Expect = 1e-15
Identities = 29/194 (14%), Positives = 57/194 (29%), Gaps = 56/194 (28%)
Query: 441 VEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGG 500
V+E+ +LR+ + LD+ + +I EF E+
Sbjct: 1 VDELLALRKR----KVFETAKSGTFLLDVKENS-YEIVCEFSGEI--------------- 40
Query: 501 AIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHG 560
+ +S + D TRS ++ +
Sbjct: 41 --------------ELRMGNESEEVVITKSRDE-------LIVDTTRSGVSGGEVR---- 75
Query: 561 SKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNV 620
K V +R +D VE F + RI+P L + +N
Sbjct: 76 -KSTVEDEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPENVYNI---LSVKSN------ 124
Query: 621 KATLKIWRLNSAFI 634
+ L+++ L + ++
Sbjct: 125 QVKLEVFELENIWL 138
|
| >d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain species: Bradyrhizobium japonicum [TaxId: 375]
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/121 (11%), Positives = 29/121 (23%), Gaps = 6/121 (4%)
Query: 96 NSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAV 155
L + +G N TW P + + ++ +P+
Sbjct: 47 KPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 106
Query: 156 WGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATIL--PDGQIVMLYTGSTDK 213
+ + A V I ++L P G + G +
Sbjct: 107 TFLKEANL----TRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEW 162
Query: 214 S 214
+
Sbjct: 163 A 163
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 37.7 bits (87), Expect = 0.003
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 12/120 (10%)
Query: 135 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP----IAMVPDQWYDINGV 190
+ Y G + ++ + S D I+W P V + + +
Sbjct: 49 AVVPYNGEFVGVFRID---HKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYA 105
Query: 191 WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLD--WVKYPGNPVLVPPRH 248
+ + D + T ++ + D + L +V + N VL P +
Sbjct: 106 YDPRVVKIEDTYYITFCTDDHGPTIG---VGMTKDFKTFVRLPNAYVPFNRNGVLFPRKI 162
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 642 | |||
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 100.0 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 99.9 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.8 | |
| d1uypa1 | 138 | Beta-fructosidase (invertase), C-terminal domain { | 99.79 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.73 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.62 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.55 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.47 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.4 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.38 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.37 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.66 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 98.52 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 98.13 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 98.08 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.82 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.8 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.68 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.66 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.88 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 92.77 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 89.9 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=0 Score=590.02 Aligned_cols=309 Identities=31% Similarity=0.624 Sum_probs=251.9
Q ss_pred CCCCCEEEEECCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCC-CC-CCCEEE
Q ss_conf 2234023453498974599510587999999985679999989748999995684551875755799996-57-997696
Q 006523 115 TWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YD-INGVWT 192 (642)
Q Consensus 115 ~w~Rp~~Hf~P~~gwmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-~D-~~Gv~S 192 (642)
+.+||+|||+|++||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+||.|+.. .| ..++||
T Consensus 5 ~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~~S 84 (353)
T d1y4wa2 5 QPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFS 84 (353)
T ss_dssp CTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEEEE
T ss_pred CCCCCCEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 88867384057999819995152999999999816999887798387999965556413887031687567677876036
Q ss_pred EEEEECCCC----------CEEEEEECCCC------------CCCCEEEEEEECCCCCCCCEEEEEC-CCCCEECCCC-C
Q ss_conf 139991399----------09999902579------------9611299999759999972039971-8992543999-9
Q 006523 193 GSATILPDG----------QIVMLYTGSTD------------KSVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPR-H 248 (642)
Q Consensus 193 GSavv~~dG----------~~~l~YTG~~~------------~~~q~q~lA~S~D~~d~ll~~W~K~-~~nPVl~~p~-g 248 (642)
|||+++.++ .++++||++.. ...|.|++|+|.|.+ ++|+|+ ..||||..++ +
T Consensus 85 Gsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~~~ 160 (353)
T d1y4wa2 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (353)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred CCEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCC----CCEEEECCCCEEECCCCCC
T ss_conf 712754798201025898118999953004654566766445770899999977999----5258946887374279988
Q ss_pred C--CCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECEEEECCCCCCCEE
Q ss_conf 9--99888899789757999099999542498007999991899898782523324899994464015994116963301
Q 006523 249 I--GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLD 326 (642)
Q Consensus 249 ~--~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~gl~ 326 (642)
. ...+||||+|+|. .++.|+|++++ ....|.+++|+|+||.+|++++.+.......+||||||||+|...+
T Consensus 161 ~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~----- 233 (353)
T d1y4wa2 161 YEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233 (353)
T ss_dssp CGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT-----
T ss_pred CCCCCCCCCCCCEEEE-CCCCEEEEEEE-ECCCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCC-----
T ss_conf 7555542578815899-89987999975-6589739999548987617804434458987516163799854079-----
Q ss_pred ECCCCCCEEEEEEEECCCC-------CCEEEEEEEECCCCCCCCCCCCCC--CCCCCEEECCC-CCCCEEEEECCCCCCE
Q ss_conf 0468998089996641899-------711999999629998213799985--45543120257-4562046764999929
Q 006523 327 TSATGPGIKHVLKASLDDT-------KVDHYAIGTYNPANDKWTPDNPEE--DVGIGLKWDYG-RYYASKSFYDPYKKRR 396 (642)
Q Consensus 327 ~~~~g~~~k~vl~~s~~~~-------~~~~Y~iG~~d~~~~~f~p~~~~~--D~g~~~~lD~G-~fYA~qtf~d~~~gRr 396 (642)
+.+.+|||..++... .+..|++|+||+. +|+++.... ..+...++|+| +|||+|||.|++++||
T Consensus 234 ----~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~gRr 307 (353)
T d1y4wa2 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDH 307 (353)
T ss_dssp ----SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGGGC
T ss_pred ----CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCC--EEEECCCCCCCCCCCCCEEECCCCEEECCCEECCCCCCE
T ss_conf ----99549999853268887541243546998771375--455068744347775534515767068971257999989
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCCEEEEEC
Q ss_conf 99996359999997858998346601399999507-997299705
Q 006523 397 IVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK-TGSNVVQWP 440 (642)
Q Consensus 397 il~GWi~e~d~~~~~~~~GWag~lslPRel~l~~~-~g~~L~q~P 440 (642)
||||||++++...+....||+|+|||||||.|++. ++.+|+|+|
T Consensus 308 i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 308 VHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp EEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCCCCCCCCCCCCEEEEECEEEEEEECCCCCEEEECC
T ss_conf 999964797457888999813046719899999889989799757
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=0 Score=576.26 Aligned_cols=284 Identities=36% Similarity=0.715 Sum_probs=250.9
Q ss_pred CCCEEEEECCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 34023453498974599510587999999985679999989748999995684551875755799996579976961399
Q 006523 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (642)
Q Consensus 117 ~Rp~~Hf~P~~gwmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSav 196 (642)
+||+|||+|+.||||||||++|++|+||||||+||.++.||+++||||+|+|||||+++|+||.|+. |.+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC--CCCCEEEEEEE
T ss_conf 7764742478898378962459899999998247999877883899999278477699884421211--78874777899
Q ss_pred ECCCCCEEEEEECCCC-----CCCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEE
Q ss_conf 9139909999902579-----96112999997599999720399718992543999999988889978975799909999
Q 006523 197 ILPDGQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (642)
Q Consensus 197 v~~dG~~~l~YTG~~~-----~~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~mi 271 (642)
+ .+|++++|||+... ...+.|++|.|.|+ ++|+|+..|||+.+++.....+||||+| |. .+|+|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M~ 151 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEEE
T ss_pred E-CCCEEEEEEEEEECCCCCCCCEEEEEEEECCCC-----CCEEEECCCCEECCCCCCCCCCCCCCCC-CC-CCCEEEEE
T ss_conf 6-499189999986678777752066677887999-----7357616875662897567665578754-15-39979999
Q ss_pred EEEE-CCCEEEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCEEE
Q ss_conf 9542-498007999991899898782523324899994464015994116963301046899808999664189971199
Q 006523 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (642)
Q Consensus 272 iGs~-~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~~~~~~Y 350 (642)
+|++ .++.|++++|+|+||++|++.+++... ...+||||||||+|+ .||||..|....+...|
T Consensus 152 ~g~~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~-~~~~~~ECPdlf~l~---------------~~~vl~~s~~~~~~~~y 215 (294)
T d1uypa2 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIECPDLVRIG---------------EKDILIYSITSTNSVLF 215 (294)
T ss_dssp EEEEETTTEEEEEEEEESSSSSEEEEEEEEEE-TTCSCEEEEEEEEET---------------TEEEEEEEETTTTEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCCEEEECCCEEC-CCCCCEEECEEEEEC---------------CEEEEEEEECCCCCEEE
T ss_conf 87240478668999975885540574221057-888833614499967---------------70289998548997155
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCC-CCCCEEEEECCCCCCEEEEEECCCCCCC--CCCCCCCCCCCCCCCEEEE
Q ss_conf 999962999821379998545543120257-4562046764999929999963599999--9785899834660139999
Q 006523 351 AIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQTIPRTVL 427 (642)
Q Consensus 351 ~iG~~d~~~~~f~p~~~~~D~g~~~~lD~G-~fYA~qtf~d~~~gRril~GWi~e~d~~--~~~~~~GWag~lslPRel~ 427 (642)
.+|+|+.. +|+++. ..++|+| +|||+|||.|. +|||+||||++++.. .++...||+|+|||||||+
T Consensus 216 ~~G~~~~~--~f~~~~-------~~~lD~G~dfYA~qtf~~~--~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel~ 284 (294)
T d1uypa2 216 SMGELKEG--KLNVEK-------RGLLDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (294)
T ss_dssp EEEEEETT--EEEEEE-------EEESCCSSSCEEEEECBSC--SSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EEEEECCC--EEEEEC-------CEEECCCCCEEECCCCCCC--CCEEEEEECCCCCCCCCCCCCCCCCCCCEEECEEEE
T ss_conf 76550497--587512-------1187168844431470189--988999987787655668875689366143088999
Q ss_pred EEECCCCEEEEEC
Q ss_conf 9507997299705
Q 006523 428 YDNKTGSNVVQWP 440 (642)
Q Consensus 428 l~~~~g~~L~q~P 440 (642)
|+ +| +|+|+|
T Consensus 285 l~--~~-~L~q~P 294 (294)
T d1uypa2 285 VE--NN-ELKVKP 294 (294)
T ss_dssp EE--TT-EEEEEE
T ss_pred EE--CC-EEEECC
T ss_conf 98--99-999649
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=1.2e-35 Score=244.86 Aligned_cols=278 Identities=14% Similarity=0.168 Sum_probs=192.6
Q ss_pred CCCCCCCE-EECCEEEEEEEECCCCCCCC---CCEEEEEEECCCCCEEECCCCCCCCC--------CCCCCCEEEEEEEE
Q ss_conf 45995105-87999999985679999989---74899999568455187575579999--------65799769613999
Q 006523 130 MNDPNGPL-FYKGWYHLFYQYNPDSAVWG---NITWGHAVSADLIHWLYLPIAMVPDQ--------WYDINGVWTGSATI 197 (642)
Q Consensus 130 mNDPnG~~-~~~G~YHLFYQ~nP~~~~wG---~~~WGHA~S~DLvhW~~~p~AL~Pd~--------~~D~~Gv~SGSavv 197 (642)
+.|++|-. .++|++++|++..|....+. ...+.|+.|+||.||++.+.+|.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred EECCCCCEEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 48898888878887999999579877899869889821388765877889643688753243566568887417565698
Q ss_pred CCCCCEEEEEECCCCCC--CCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCC-----------------CCCCCCCCE
Q ss_conf 13990999990257996--11299999759999972039971899254399999-----------------998888997
Q 006523 198 LPDGQIVMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI-----------------GPKDFRDPT 258 (642)
Q Consensus 198 ~~dG~~~l~YTG~~~~~--~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~-----------------~~~~fRDP~ 258 (642)
..||+++|||||.+... .|++..|...-..|++++.|++...+++|..|+|. +..+||||+
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred CCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 46994999997315888885157877777751688521503567844654897554200001336777777765552896
Q ss_pred EEEECCCCEEEEEEEEECC-------------------------------------------CEEEEEEEEECCCCCCEE
Q ss_conf 8975799909999954249-------------------------------------------800799999189989878
Q 006523 259 TAWAGPDGKWRLTIGSKIG-------------------------------------------KTGISLVYQTTDFKTYEL 295 (642)
Q Consensus 259 V~w~~~~g~w~miiGs~~~-------------------------------------------~~G~~~lY~S~Dl~~W~~ 295 (642)
| |. .+|+|||++++... +.++.+++.++|+.+|++
T Consensus 217 v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~We~ 294 (440)
T d1oyga_ 217 Y-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKV 294 (440)
T ss_dssp E-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSEEEE
T ss_pred E-EE-ECCEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCEE
T ss_conf 1-02-599689987044266655235310012334566553333433322345544310432625999994787656366
Q ss_pred CCCCCCCCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEEC-------CCCCCEEEEEEEE--CCCCCCCCCCC
Q ss_conf 25233248999944640159941169633010468998089996641-------8997119999996--29998213799
Q 006523 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL-------DDTKVDHYAIGTY--NPANDKWTPDN 366 (642)
Q Consensus 296 ~~~l~~~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~-------~~~~~~~Y~iG~~--d~~~~~f~p~~ 366 (642)
.++++++....+|||||++|+++ .||+|..|. ++.+++.|.++-| |.-.+.|.|.+
T Consensus 295 ~~pLl~a~~v~d~~ErP~I~~~n---------------GKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~PlN 359 (440)
T d1oyga_ 295 MKPLIASNTVTDEIERANVFKMN---------------GKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLN 359 (440)
T ss_dssp EEEEEECTTTCSCCEEEEEEEET---------------TEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEEGG
T ss_pred CCCCEECCCCCCEEECCEEEEEC---------------CEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECC
T ss_conf 67522036878737877799989---------------999999964543223777578872389997888889972158
Q ss_pred C-CCCCCCCEEECCCC-CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 9-85455431202574-562046764999929999963599999978589983466013999995
Q 006523 367 P-EEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429 (642)
Q Consensus 367 ~-~~D~g~~~~lD~G~-fYA~qtf~d~~~gRril~GWi~e~d~~~~~~~~GWag~lslPRel~l~ 429 (642)
. -+.++.....|++. .|+..+|.+...+++++++||.+++. ..+.. |.+.-+..|.|+
T Consensus 360 ~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~-~~~~g----~t~APt~~l~l~ 419 (440)
T d1oyga_ 360 KTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGF-YADKQ----STFAPSFLLNIK 419 (440)
T ss_dssp GTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTS-CSSCC----CEECBCEEEEEE
T ss_pred CCCCEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCC-CCCCC----CCCCCCEEEEEC
T ss_conf 8762333678987675121368830787760799986147675-55557----731872799876
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=99.90 E-value=5.2e-22 Score=156.78 Aligned_cols=158 Identities=18% Similarity=0.235 Sum_probs=106.3
Q ss_pred HHHHHCCCE--EEEEEEECCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 886031661--334379659942210464320344548999983476766444000389643456673179999829998
Q 006523 444 IESLRQNST--VFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLS 521 (642)
Q Consensus 444 i~~LR~~~~--~~~~~~v~~g~~~~l~~~~~~qldi~a~fei~l~~~~~~~~~~~~s~g~a~r~~~g~fGl~v~ad~~~~ 521 (642)
..++|.... .....++..|+.. +. ..+.+++|.++|.+. . .+ ..|||.+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~tl~~g~~~-~~-~~g~~~el~l~~~~~--~-------------~a-----~~fgl~lr~s~d~~ 60 (164)
T d1y4wa1 3 WSSISNKRPIYSRTFKTLSEGSTN-TT-TTGETFKVDLSFSAK--S-------------KA-----STFAIALRASANFT 60 (164)
T ss_dssp GGGTBCSSCSEEEEEEEECSEECC-CE-ECCSSEEEEEEEETT--C-------------SS-----SEEEEEEEECTTSS
T ss_pred HHHHHHCCCEECCCCCCCCCCEEE-CC-CCCCEEEEEEEEECC--C-------------CC-----CEEEEEEEECCCCC
T ss_conf 576541674251143423566273-47-767579999999758--9-------------75-----67999999759998
Q ss_pred CEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEE--CCCCEEEEEEEEECCEEEEEEECCCEEEEEEEEC
Q ss_conf 53879999516889971478740688889988521113335652--1597499999984885999970892089996515
Q 006523 522 ELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPV--LQGEKLSMRILVDHSIVESFGQGGRTVITSRIYP 599 (642)
Q Consensus 522 e~t~v~f~v~~~~~g~~t~~~~D~~rSs~~~~~~~~~~g~~~pv--l~~e~~~lrIlVD~SivEvF~n~Gr~~~TsRvYP 599 (642)
|.|.|+|+...+ .+++||++|+..............|+ ..+++++||||||+|+||||+|||+.|+|+|+||
T Consensus 61 e~t~i~yd~~~~------~l~vDRs~sg~~~~~~~~~~~~~~~~~~~~~~~l~Lri~vD~ssvEvF~NdG~~~~T~~~fp 134 (164)
T d1y4wa1 61 EQTLVGYDFAKQ------QIFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFP 134 (164)
T ss_dssp SCEEEEEETTTT------EEEEECTTSSCCTTCTTTSCEEEEECCCCTTSEEEEEEEEETTEEEEEETTTTEEEEEECCC
T ss_pred EEEEEEEECCCC------EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCEEEEEECCCEEEEEEEECC
T ss_conf 899999989888------99998899999765545562467710257898089999997869999978985999999549
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCC
Q ss_conf 9633675179999468871699999995136544
Q 006523 600 TKAIYGAARLFLFNNATGVNVKATLKIWRLNSAF 633 (642)
Q Consensus 600 ~~~~~~~~~i~lf~na~~~~v~~sl~iw~m~s~~ 633 (642)
.++ +.+|.+|++++.+.+ .++++|+|+|+|
T Consensus 135 ~~~---~~~i~~~s~gg~~~~-~~l~v~~lksiW 164 (164)
T d1y4wa1 135 SSD---AVHARLASTGGTTED-VRADIYKIASTW 164 (164)
T ss_dssp CTT---CCEEEEEEESSCEEE-EEEEEEEBCCCC
T ss_pred CCC---CCEEEEEECCCEEEE-EEEEEEECCCCC
T ss_conf 988---877999983980899-999999664569
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.80 E-value=7.2e-19 Score=136.44 Aligned_cols=160 Identities=13% Similarity=0.094 Sum_probs=118.2
Q ss_pred CCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECC-CCCCCCC---CCCCCCEEEEEEEECCCCCEE
Q ss_conf 745995105879999999856799999897489999956845518757-5579999---657997696139991399099
Q 006523 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQ---WYDINGVWTGSATILPDGQIV 204 (642)
Q Consensus 129 wmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p-~AL~Pd~---~~D~~Gv~SGSavv~~dG~~~ 204 (642)
-+| | |+++++|+|||+|+..- .++.+++|+|+|+|+|||+..+ +++.|+. .++..||++++++. .+|.++
T Consensus 45 vfN-p-~~i~~~g~~~ll~r~~~---~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~-~~d~yy 118 (327)
T d1vkda_ 45 VFN-S-AVVPYNGEFVGVFRIDH---KNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDTYY 118 (327)
T ss_dssp EEE-E-EEEEETTEEEEEEEEEE---TTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTEEE
T ss_pred EEC-C-EEEEECCEEEEEEEECC---CCCCEEEEEEECCCCCCCEECCCCEECCCCCCCCCCCCCEECCEEEE-ECCEEE
T ss_conf 004-6-79998999999999638---99852799998388668781799806278887634568587550999-899999
Q ss_pred EEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEE---CCCEEE
Q ss_conf 99902579961129999975999997203997189925439999999888899789757999099999542---498007
Q 006523 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK---IGKTGI 281 (642)
Q Consensus 205 l~YTG~~~~~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~---~~~~G~ 281 (642)
|+||+... .+.+++|+|.|. ++|+|.+ +++. ..-||+.++..+.+|+|+|+.-.. ....|.
T Consensus 119 m~yt~~~~--~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~ 182 (327)
T d1vkda_ 119 ITFCTDDH--GPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGD 182 (327)
T ss_dssp EEEEEESS--SEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCC
T ss_pred EEEEECCC--CCEEEEEEECCC-----CHHEECC--CCCC-------CCCCCCEEEEEECCCEEEEEEEECCCCCCCCCE
T ss_conf 99990389--847999992375-----2000027--7557-------666674275664167489999632677766551
Q ss_pred EEEEEECCCCCCEECCCCCCCCCCCCCEEE
Q ss_conf 999991899898782523324899994464
Q 006523 282 SLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311 (642)
Q Consensus 282 ~~lY~S~Dl~~W~~~~~l~~~~~~~gmwEC 311 (642)
+.+.+|+||.+|+....++.. ...+.||+
T Consensus 183 I~la~S~Dl~~W~~~~~v~~~-~~~~~wd~ 211 (327)
T d1vkda_ 183 IFLSESPDMIHWGNHRFVLGR-SSYNWWEN 211 (327)
T ss_dssp EEEEEESSSSCBEEEEEEECC-CSSCGGGS
T ss_pred EEEECCCCCCCCCCCCEECCC-CCCCCEEE
T ss_conf 899828874312454100146-88874101
|
| >d1uypa1 b.29.1.19 (A:295-432) Beta-fructosidase (invertase), C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Beta-fructosidase (invertase), C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=99.79 E-value=6.5e-18 Score=130.26 Aligned_cols=138 Identities=24% Similarity=0.339 Sum_probs=86.7
Q ss_pred HHHHHHHHCCCEEEEEEEECCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 68888603166133437965994221046432034454899998347676644400038964345667317999982999
Q 006523 441 VEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSL 520 (642)
Q Consensus 441 v~Ei~~LR~~~~~~~~~~v~~g~~~~l~~~~~~qldi~a~fei~l~~~~~~~~~~~~s~g~a~r~~~g~fGl~v~ad~~~ 520 (642)
|+|+++||.++. + .........++. .+..+||.++|+.+ |.+.+ ..+
T Consensus 1 V~El~~LRk~~~-~---~~~~~~~~~l~~-~~~~~El~~~~~~~-------------------------~~~~~--~~~- 47 (138)
T d1uypa1 1 VDELLALRKRKV-F---ETAKSGTFLLDV-KENSYEIVCEFSGE-------------------------IELRM--GNE- 47 (138)
T ss_dssp CGGGGGGEEEEE-E---EESSCEEEECCC-SSSCEEEEEEEEEE-------------------------EEEEE--ECS-
T ss_pred CHHHHHHHHCCC-C---CCCCCCCEEECC-CCCEEEEEEEEECC-------------------------CEEEE--CCC-
T ss_conf 977988653521-0---212677288216-88669999995178-------------------------01242--589-
Q ss_pred CCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCEEEEEEECCCEEEEEEEECC
Q ss_conf 85387999951688997147874068888998852111333565215974999999848859999708920899965159
Q 006523 521 SELTPIFFRSSNTTKGTNTYFCADETRSSLAPDVFKQVHGSKVPVLQGEKLSMRILVDHSIVESFGQGGRTVITSRIYPT 600 (642)
Q Consensus 521 ~e~t~v~f~v~~~~~g~~t~~~~D~~rSs~~~~~~~~~~g~~~pvl~~e~~~lrIlVD~SivEvF~n~Gr~~~TsRvYP~ 600 (642)
.+. +.|+..++ .+.+||++++...+.. ..+++..++.++||||||+|+||||+|+|+ |||+||||.
T Consensus 48 ~~~--~~~~~~~~------~l~~dR~~s~~~~~~~-----r~~~~~~~~~~~LrIfvD~SsvEiFiNdg~-v~t~rvfP~ 113 (138)
T d1uypa1 48 SEE--VVITKSRD------ELIVDTTRSGVSGGEV-----RKSTVEDEATNRIRAFLDSCSVEFFFNDSI-AFSFRIHPE 113 (138)
T ss_dssp SCE--EEEEEETT------EEEEECTTSSTTCCCE-----EEEECCCCSSEEEEEEEETTEEEEEETTTE-EEEEECCCS
T ss_pred CEE--EEEEECCC------EEEEEEECCCCCCCCE-----EEEECCCCCCEEEEEEEEEEEEEEEECCCE-EEEEEECCC
T ss_conf 528--99994599------9999951054478824-----999817898479999997029999987988-999998589
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCC
Q ss_conf 6336751799994688716999999951365442
Q 006523 601 KAIYGAARLFLFNNATGVNVKATLKIWRLNSAFI 634 (642)
Q Consensus 601 ~~~~~~~~i~lf~na~~~~v~~sl~iw~m~s~~~ 634 (642)
+.. .+|.++.+ ..++++|+|+|+|+
T Consensus 114 ~~~---~~i~~~~~------~~~~~~~~Lksiw~ 138 (138)
T d1uypa1 114 NVY---NILSVKSN------QVKLEVFELENIWL 138 (138)
T ss_dssp SCC---CEEEEEEE------EEEEEEEEECCSCC
T ss_pred CCC---CEEEEEEC------CCEEEEEECCCCCC
T ss_conf 877---57999934------54799997000119
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=2.1e-15 Score=114.09 Aligned_cols=191 Identities=15% Similarity=0.139 Sum_probs=123.4
Q ss_pred CCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC-CC------CCCCEEEEEEEECCCCC
Q ss_conf 459951058799999998567999998974899999568455187575579999-65------79976961399913990
Q 006523 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WY------DINGVWTGSATILPDGQ 202 (642)
Q Consensus 130 mNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~-~~------D~~Gv~SGSavv~~dG~ 202 (642)
++||+ +++++|+||||...... ...+.++.|+||+||+.++.++.+.. +. ...++|.+++.. .+|+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEECCCC-----CCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-ECCE
T ss_conf 60998-99989999999822887-----89679999998798789850235775322235776687503308999-8997
Q ss_pred EEEEEECCCCC-CCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEE
Q ss_conf 99999025799-61129999975999997203997189925439999999888899789757999099999542498007
Q 006523 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (642)
Q Consensus 203 ~~l~YTG~~~~-~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~ 281 (642)
++|+|++.... ..+.+++|+|++. +. -.|+.. ++++...+. .....+||.+++ +++|++||+.+.. ..|
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~--~~-Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Y~~~~~~--~~~- 152 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSI--SS-GGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSF--WSG- 152 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCT--TT-TCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBS--TTC-
T ss_pred EEEEEEECCCCCCCCEEEEEEECCC--CC-CCCCCC--CCCCCCCCC-CCCCCCCCEEEE-ECCCCEEEEECCC--CCC-
T ss_conf 9999970377788622799994777--89-997867--521255567-887753752899-5599689995025--773-
Q ss_pred EEEEE-ECCCCCCEECCCCC---CCCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCCC---CCEEEEEEE
Q ss_conf 99999-18998987825233---248999944640159941169633010468998089996641899---711999999
Q 006523 282 SLVYQ-TTDFKTYELLDEYL---HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---KVDHYAIGT 354 (642)
Q Consensus 282 ~~lY~-S~Dl~~W~~~~~l~---~~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~~---~~~~Y~iG~ 354 (642)
+.+++ +.|. +...+... ......++.|||.+|+.+ .+++|..|.... ...-|.++-
T Consensus 153 i~i~~l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~---------------g~Yyl~~S~~~~~~~~~~~y~v~~ 215 (291)
T d1uv4a1 153 IKLTKLDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN---------------GYYYLMVSFDKCCDGVNSTYKIAY 215 (291)
T ss_dssp EEEEEECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET---------------TEEEEEEEEECSSSSSCCEEEEEE
T ss_pred EEEEEECCCC--CCCCCCEEEEEECCCCCCCCCCCEEEEEC---------------CEEEEEEECCCCCCCCCCCCEEEE
T ss_conf 2788622656--60868406987547878600466799989---------------989999953766579988810289
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.62 E-value=1.6e-13 Score=101.90 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=116.6
Q ss_pred CCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCC-------CCCCCEEEEEEEECCCCC
Q ss_conf 4599510587999999985679999989748999995684551875755799996-------579976961399913990
Q 006523 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQ 202 (642)
Q Consensus 130 mNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~-------~D~~Gv~SGSavv~~dG~ 202 (642)
+.||+ +++++|.||||... + .+..++|+||+||+.++.++.+... ....++|++++.. .+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~-~--------gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG-P--------GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE-E--------TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEEE-C--------CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEECCEEEE-ECCC
T ss_conf 79987-99989999999960-9--------878998999889839970136886333467886789459888999-8274
Q ss_pred EEEEEECCCCC-CCCEEEEEEECCCC-CCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEE
Q ss_conf 99999025799-61129999975999-99720399718992543999999988889978975799909999954249800
Q 006523 203 IVMLYTGSTDK-SVQVQNLAYPADPS-DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (642)
Q Consensus 203 ~~l~YTG~~~~-~~q~q~lA~S~D~~-d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G 280 (642)
++|+|++.... ....+.+|++.... +.....|++. ..+....+......++||.+++ +.+|++||+.++... +
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~-d~dG~~Yl~~~~~~~--~ 150 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFWG--G 150 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBSTT--C
T ss_pred EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCC--CEECCCCCCCCCCCEECCCEEE-ECCCCEEEECCCCCC--C
T ss_conf 0999998648975441668998514787444665357--4011368887887518563376-139958995567799--8
Q ss_pred EEEEEE-ECCCC------CCEECCCC----CCCC--CCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCC
Q ss_conf 799999-18998------98782523----3248--99994464015994116963301046899808999664189
Q 006523 281 ISLVYQ-TTDFK------TYELLDEY----LHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 281 ~~~lY~-S~Dl~------~W~~~~~l----~~~~--~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~ 344 (642)
. .+.+ ..|+. .|...... +... ....++|||.+|+.+ .+++|..|...
T Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~yS~~~ 211 (318)
T d1gyha_ 151 L-KLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG---------------DYYYLFASWGL 211 (318)
T ss_dssp E-EEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET---------------TEEEEEEEESC
T ss_pred E-EEEECCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCEEECCEEEEEC---------------CEEEEEEECCC
T ss_conf 0-0674171041001354320012355412412577787265167899879---------------97899994588
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.55 E-value=1.2e-12 Score=96.27 Aligned_cols=182 Identities=21% Similarity=0.188 Sum_probs=116.7
Q ss_pred CCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCC--------CCCCCCCEEEEEEEECCC
Q ss_conf 745995105879999999856799999897489999956845518757557999--------965799769613999139
Q 006523 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD--------QWYDINGVWTGSATILPD 200 (642)
Q Consensus 129 wmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd--------~~~D~~Gv~SGSavv~~d 200 (642)
|..||+ +++++|.|+||... .++..+.|+||+||+.++.+|... .+.+..++|++.+.. .+
T Consensus 23 ~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 91 (312)
T d1wl7a1 23 WAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-YN 91 (312)
T ss_dssp BCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ET
T ss_pred CCCCCE-EEEECCEEEEEEEC---------CCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEE-EC
T ss_conf 727987-99999999999911---------99219992898984388502457742233467755678467366898-29
Q ss_pred CCEEEEEECCCCC-CCCEEEEEEEC--CCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECC
Q ss_conf 9099999025799-61129999975--99999720399718992543999999988889978975799909999954249
Q 006523 201 GQIVMLYTGSTDK-SVQVQNLAYPA--DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (642)
Q Consensus 201 G~~~l~YTG~~~~-~~q~q~lA~S~--D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~ 277 (642)
|+++|+||+.... ....+.+|.+. +..+|. ..|++. .|++..++. ....++||.+++ ..+|+++|+.+....
T Consensus 92 g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~~~~~~-~~~~~iD~~~f~-d~dG~~y~~~~~~~~ 166 (312)
T d1wl7a1 92 GIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPD-YEWKDM--GPVIHSTAS-DNYNAIDPNVVF-DQEGQPWLSFGSFWS 166 (312)
T ss_dssp TEEEEEEEECCTTCCCEEEEEEEESCSCTTSTT-CCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBSTT
T ss_pred CEEEEEEEEECCCCCCCEEEEEEEECCCCCCCC-CCCCCC--CCEECCCCC-CCCCCCCCCEEE-CCCCCEEEEECCCCC
T ss_conf 979999995148854320667887412378986-443336--623157887-887748876267-259967775069887
Q ss_pred CEEEEEEEE-ECCCCCCEECCC-CCCC--CCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCC
Q ss_conf 800799999-189989878252-3324--899994464015994116963301046899808999664189
Q 006523 278 KTGISLVYQ-TTDFKTYELLDE-YLHA--VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 278 ~~G~~~lY~-S~Dl~~W~~~~~-l~~~--~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~ 344 (642)
.+.+++ +.|.....-... +... .......|+|.+|+.+ .+++|..|...
T Consensus 167 ---~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~---------------g~yYl~ys~~~ 219 (312)
T d1wl7a1 167 ---GIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN---------------GYYYLFVSFDF 219 (312)
T ss_dssp ---CEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET---------------TEEEEEEEESC
T ss_pred ---CEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEC---------------CCEEEEEECCC
T ss_conf ---235799768677086775699854568888841156799989---------------90899996588
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.47 E-value=4.7e-10 Score=79.48 Aligned_cols=180 Identities=15% Similarity=0.044 Sum_probs=112.6
Q ss_pred CCCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC------CCCCCCEEEEEEEECCCC
Q ss_conf 97459951058799999998567999998974899999568455187575579999------657997696139991399
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPDG 201 (642)
Q Consensus 128 gwmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~dG 201 (642)
++..||. +++++|.|+||+...... ..+..+.|+||+||+.++.+|.... ..+..++|.+.+.. .+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEECCCCC-----CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE-ECC
T ss_conf 9999988-999999999998268888-----972899899736777915544577535557776667644742799-999
Q ss_pred CEEEEEECCCCC----CCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC-
Q ss_conf 099999025799----611299999759999972039971899254399999998888997897579990999995424-
Q 006523 202 QIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI- 276 (642)
Q Consensus 202 ~~~l~YTG~~~~----~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~- 276 (642)
+++|+|+..... ..+.+.+|++.+.. -.|+.. ... .....||.+++ +.+|+.+|+.+...
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~----~~~------~~~~~D~~~~~-d~dg~~~~~~~~~~~ 145 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP----ITL------NGSGFDASLFH-DNDGKKYLVNMYWDQ 145 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC----EEC------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCCCC----CCCCCC----EEE------CCCCCCCCEEE-ECCCCEEEEEECCCC
T ss_conf 899999965168987553136865368988----886542----000------22466886789-738988999722688
Q ss_pred ----CC-EEEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCC
Q ss_conf ----98-007999991899898782523324899994464015994116963301046899808999664189
Q 006523 277 ----GK-TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (642)
Q Consensus 277 ----~~-~G~~~lY~S~Dl~~W~~~~~l~~~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~ 344 (642)
.. .++.+...+.|..+..-..............|.|.+|+-+ .+++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~---------------g~yyl~~s~~~ 203 (321)
T d1y7ba2 146 RTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG---------------DYYYLFTAEGG 203 (321)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred CCCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCCCCCEEEEEC---------------CEEEEEECCCC
T ss_conf 76656766214674078764375776687634687755663699979---------------99999983799
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.40 E-value=3.7e-09 Score=73.69 Aligned_cols=259 Identities=14% Similarity=0.076 Sum_probs=138.2
Q ss_pred CCCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC------CCCCCCEEEEEEEECCCC
Q ss_conf 97459951058799999998567999998974899999568455187575579999------657997696139991399
Q 006523 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPDG 201 (642)
Q Consensus 128 gwmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~dG 201 (642)
++.-||. ++++++.|+||+..... ...+..+.|+||+||+.++.++.... ..+..++|.+.+. ..+|
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~~-----~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~-~~~G 81 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLS-YSDG 81 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEE-EETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-----CCCCEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEE-EECC
T ss_conf 9899988-99989999999827888-----898089989985886795644356653545777666776462589-9899
Q ss_pred CEEEEEECCCCC-C---CCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECC
Q ss_conf 099999025799-6---112999997599999720399718992543999999988889978975799909999954249
Q 006523 202 QIVMLYTGSTDK-S---VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (642)
Q Consensus 202 ~~~l~YTG~~~~-~---~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~ 277 (642)
+++|+|+..... . .....++.+.+.. ..|+ .|+... ....||.+++ +.+|+.||+.+....
T Consensus 82 ~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~----~~~~~~------~~~~dp~~f~-d~dG~~Yl~~~~~~~ 146 (322)
T d2exha2 82 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWS----DPIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 146 (322)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCC----CCEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEECCCCC----CCCC----CCEEEC------CCCCCCCEEE-ECCCCEEEEECCCCC
T ss_conf 899999940046887443433787668878----9854----325765------7878887579-769989999514588
Q ss_pred ---CEEEEEE-EEECCCCCCEECCCCCC--CCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCCCCCEEEE
Q ss_conf ---8007999-99189989878252332--48999944640159941169633010468998089996641899711999
Q 006523 278 ---KTGISLV-YQTTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (642)
Q Consensus 278 ---~~G~~~l-Y~S~Dl~~W~~~~~l~~--~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~~~~~~Y~ 351 (642)
......+ ....+...++..+.... ........|.|.+|+.+ .+++|..|....... |.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------g~YYl~~s~~~~~~~-y~ 210 (322)
T d2exha2 147 RVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN---------------GYYYLLTAEGGTRYN-HA 210 (322)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESCSSTT-CE
T ss_pred CCCCCCCCCEEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEC---------------CEEEEEEECCCCCCC-CE
T ss_conf 66767765157764057677587886798873388766675799989---------------999999947999998-41
Q ss_pred EEEE--CCCCCCCCC--CCCCCCCCCCEEECC-C-CCCCE---EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9996--299982137--999854554312025-7-45620---4676499992999996359999997858998346601
Q 006523 352 IGTY--NPANDKWTP--DNPEEDVGIGLKWDY-G-RYYAS---KSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTI 422 (642)
Q Consensus 352 iG~~--d~~~~~f~p--~~~~~D~g~~~~lD~-G-~fYA~---qtf~d~~~gRril~GWi~e~d~~~~~~~~GWag~lsl 422 (642)
++-. +...+.|+. .++-++- ... + .++.+ ..|.++ +|+.+++--................+...+
T Consensus 211 v~~~rS~~~~GP~~~~~~~pi~~~-----~~~~~~~~~g~GH~~~v~~~-dg~w~~~yh~~~~~~~~~~~~~~~~~~~~~ 284 (322)
T d2exha2 211 ATIARSTSLYGPYEVHPDNPLLTS-----WPYPRNPLQKAGHASIVHTH-TDEWFLVHLTGRPLPREGQPLLEHRGYCPL 284 (322)
T ss_dssp EEEEEESSTTCCCEECTTCCSEES-----TTCTTCSSEEEEEEEEEECT-TSCEEEEEEEECCCCCTTSCTTTCCCCCTT
T ss_pred EEEEEECCCCCCCCCCCCCEEECC-----CCCCCCCCCCCCEEEEEECC-CCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 899995788765414799417626-----88877874579847999997-998999998714777666631003673666
Q ss_pred CEEEEEEE
Q ss_conf 39999950
Q 006523 423 PRTVLYDN 430 (642)
Q Consensus 423 PRel~l~~ 430 (642)
=|++.|++
T Consensus 285 GR~~~l~~ 292 (322)
T d2exha2 285 GRETAIQR 292 (322)
T ss_dssp CEEEEEEE
T ss_pred CCEEEEEE
T ss_conf 76899999
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.38 E-value=1.9e-10 Score=81.97 Aligned_cols=182 Identities=15% Similarity=0.119 Sum_probs=110.5
Q ss_pred CCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCC------CCCCCCEEEEEEEECCC
Q ss_conf 897459951058799999998567999998974899999568455187575579999------65799769613999139
Q 006523 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPD 200 (642)
Q Consensus 127 ~gwmNDPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~------~~D~~Gv~SGSavv~~d 200 (642)
.++.-||. +++++|.|+||+..+... ..+..+.|+||+||+.++.++.... ......+|.+.+. ..+
T Consensus 8 ~~~~aDP~-vi~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~ 80 (317)
T d1yrza2 8 PGFHPDPS-IVRVGDDYYIATSTFEWF-----PGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLS-YHD 80 (317)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEE-EET
T ss_pred CCCCCCCE-EEEECCEEEEEECCCCCC-----CCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCEEE-EEC
T ss_conf 99899987-999899999997168888-----97599989987897698745467632456788666606232379-999
Q ss_pred CCEEEEEECCCCC----CCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC
Q ss_conf 9099999025799----611299999759999972039971899254399999998888997897579990999995424
Q 006523 201 GQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (642)
Q Consensus 201 G~~~l~YTG~~~~----~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~ 276 (642)
|+++|+|+..... ....+.++.+.+.. ..|+ .|+... ....||.+++ +++|+.||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~----~~~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWS----DPIYLN------SSGFDPSLFH-DDDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCC----CCEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEEECCCCCCCCCCEEEEEECCCCC----CCCC----CEEEEC------CCCCCCCEEE-ECCCCEEEEEECCC
T ss_conf 9899999974468887555168998068888----9843----216515------7860885889-05998899986667
Q ss_pred C---CE--EEEEEEEECCCCCCEECCCCCC--CCCCCCCEEEECEEEECCCCCCCEEECCCCCCEEEEEEEECCCCC
Q ss_conf 9---80--0799999189989878252332--489999446401599411696330104689980899966418997
Q 006523 277 G---KT--GISLVYQTTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (642)
Q Consensus 277 ~---~~--G~~~lY~S~Dl~~W~~~~~l~~--~~~~~gmwECPdlf~l~~~~~~gl~~~~~g~~~k~vl~~s~~~~~ 346 (642)
. .. ..+.+.. .+...++..+.... .....+..|+|.+|+.+ .+.+|..|.....
T Consensus 146 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------g~yyl~~s~~~~~ 206 (317)
T d1yrza2 146 YRKGNHPFAGIILQE-YSEAEQKLVGPVKNIYKGTDIQLTEGPHLYKKD---------------GYYYLLVAEGGTE 206 (317)
T ss_dssp CCTTSCSEEEEEEEE-EETTTTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESCSS
T ss_pred CCCCCCCCCCEEEEE-CCCCCCEECCCCEEEEECCCCCCCCCCEEEEEC---------------CEEEEEECCCCCC
T ss_conf 677776643025663-176667075773587744677755476699979---------------9899987569999
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.37 E-value=3.2e-12 Score=93.46 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=94.8
Q ss_pred ECCCCCEEECC-CCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEC
Q ss_conf 56845518757-55799996579976961399913990999990257996112999997599999720399718992543
Q 006523 166 SADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244 (642)
Q Consensus 166 S~DLvhW~~~p-~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~~~~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~ 244 (642)
|++++ |++.. +.|.|+..+....||.+.|+. .+|+++|+|.+....+...+++|+|.|+ ++|+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCC-EECCCCCCCCCCCCCCHHCEECCEEEE-ECCEEEEEEEECCCCCCEEEEEEECCCC-----CCCEECC-CCEEC
T ss_conf 78871-356999612688785022100467999-8999999999638998527999983886-----6878179-98062
Q ss_pred CCCC---CCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCC
Q ss_conf 9999---99988889978975799909999954249800799999189989878252332
Q 006523 245 PPRH---IGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (642)
Q Consensus 245 ~p~g---~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~ 301 (642)
+... .+...++||.|+. .+++|+|++.+.. +..++.+++|+||++|+..+.++.
T Consensus 93 p~~~~~~~~~~gv~DPrv~~--~~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~~~ 149 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVK--IEDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNAYV 149 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEE--ETTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCSSS
T ss_pred CCCCCCCCCCCCEECCEEEE--ECCEEEEEEEECC-CCCEEEEEEECCCCHHEECCCCCC
T ss_conf 78887634568587550999--8999999999038-984799999237520000277557
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.66 E-value=6.2e-07 Score=59.34 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=19.1
Q ss_pred CCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCC
Q ss_conf 997897579990999995424980079999918998987825233
Q 006523 256 DPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (642)
Q Consensus 256 DP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~ 300 (642)
||.|+ + .+|+|||+........| +.+|+|+||.+|+..+.++
T Consensus 12 DP~vi-~-~~g~YY~~~t~~~~~~g-~~i~~S~DL~~W~~~g~~~ 53 (291)
T d1uv4a1 12 DPTMI-K-EGSSWYALGTGLTEERG-LRVLKSSDAKNWTVQKSIF 53 (291)
T ss_dssp SCEEE-E-ETTEEEEEEECCTTSSB-EEEEEESSSSSCEEEEEET
T ss_pred CCEEE-E-ECCEEEEEEECCCCCCC-EEEEECCCCCCCEECCCCC
T ss_conf 99899-9-89999999822887896-7999999879878985023
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=98.52 E-value=3.9e-06 Score=54.20 Aligned_cols=89 Identities=18% Similarity=0.161 Sum_probs=41.2
Q ss_pred ECCCCCEEEEEECCCCC---CCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEE
Q ss_conf 91399099999025799---611299999759999972039971899254399999998888997897579990999995
Q 006523 197 ILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273 (642)
Q Consensus 197 v~~dG~~~l~YTG~~~~---~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiG 273 (642)
+..+|+++|||--+-.. +...-++|+|+| |++|+.. .++|.|.. +....-.+.++ . .+|+++|++.
T Consensus 22 ~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~al~p~~--d~~g~~sGsav-~-~~g~~~~~yT 90 (294)
T d1uypa2 22 IFWKGKYHMFYQYNPRKPEWGNICWGHAVSDD-----LVHWRHL--PVALYPDD--ETHGVFSGSAV-E-KDGKMFLVYT 90 (294)
T ss_dssp EEETTEEEEEEEEETTSSSSCSCEEEEEEESS-----SSSCEEE--EEEECCSS--TTEEEEEEEEE-E-ETTEEEEEEE
T ss_pred EEECCEEEEEEECCCCCCCCCCCEEEEEEECC-----CCCEEEC--CCCCCCCC--CCCCEEEEEEE-E-CCCEEEEEEE
T ss_conf 59899999998247999877883899999278-----4776998--84421211--78874777899-6-4991899999
Q ss_pred EE-C--CC---EEEEEEEEECCCCCCEEC
Q ss_conf 42-4--98---007999991899898782
Q 006523 274 SK-I--GK---TGISLVYQTTDFKTYELL 296 (642)
Q Consensus 274 s~-~--~~---~G~~~lY~S~Dl~~W~~~ 296 (642)
+. . .. .-...++.|+|+.+|+..
T Consensus 91 ~~~~~~~~~~~~~~~~~a~s~dg~~w~k~ 119 (294)
T d1uypa2 91 YYRDPTHNKGEKETQCVVMSENGLDFVKY 119 (294)
T ss_dssp EEECCCSSCCCEEEEEEEEESSSSCCEEC
T ss_pred EEECCCCCCCCEEEEEEEECCCCCCEEEE
T ss_conf 86678777752066677887999735761
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=98.13 E-value=3.5e-05 Score=48.00 Aligned_cols=140 Identities=10% Similarity=0.044 Sum_probs=99.5
Q ss_pred CCCCCEEECCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCC
Q ss_conf 99510587999999985679999989748999995684551875755799996579976961399913990999990257
Q 006523 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (642)
Q Consensus 132 DPnG~~~~~G~YHLFYQ~nP~~~~wG~~~WGHA~S~DLvhW~~~p~AL~Pd~~~D~~Gv~SGSavv~~dG~~~l~YTG~~ 211 (642)
.|..++.++|++||++..-... .|...+.+.+.+.+..+|+..|- | .-|+-...++. .+|+++|-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~---p-----~~glEDPrvt~-i~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE---L-----SWELEDPYIAK-INNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT---C-----CBSCEEEEEEE-ETTEEEEEEEEEC
T ss_pred CCCCEEEECCEEEEEEEEECCC-CCEEEEEEEEEECCCCCEEECCC---C-----CCCCCCCCEEE-ECCEEEEEEEEEC
T ss_conf 6775788999999999987067-63178999997359833587785---1-----13677887773-9999999999966
Q ss_pred CCCCCEEEEEEECCCCCCCCEEEEECCCCCEEC-CCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCC
Q ss_conf 996112999997599999720399718992543-9999999888899789757999099999542498007999991899
Q 006523 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290 (642)
Q Consensus 212 ~~~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~-~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl 290 (642)
... ...++|++.+ ++.|.+. .|++. .|++ .+|--+ ....+|+|.|+.--+....|.+.+..++||
T Consensus 101 ~~~-~~~~~~~t~~-----~r~~~~~--l~~f~~gp~~-----~Kdi~L-~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~l 166 (310)
T d2b4wa1 101 KNG-NAILSYYGYF-----YRGTPDE--LTYFTRGPGC-----MKDIRV-LQLQDGRLGVFSRPRVGRKASIGFVILNSI 166 (310)
T ss_dssp ------CCCEEEEE-----EEEETTE--EEEEEECCTT-----CCCCEE-EECTTSCEEEEECCCC---CCEEEEEESCG
T ss_pred CCC-CCCEEEEEEE-----EECCHHC--CCEEECCCCC-----CCCEEE-EEEECCEEEEEECCCCCCCCEEEEEEECCH
T ss_conf 889-8630799655-----5255001--7513038975-----631786-776099899997621389980579995873
Q ss_pred CCCEE
Q ss_conf 89878
Q 006523 291 KTYEL 295 (642)
Q Consensus 291 ~~W~~ 295 (642)
.+|+.
T Consensus 167 ~~~t~ 171 (310)
T d2b4wa1 167 DELGA 171 (310)
T ss_dssp GGCSH
T ss_pred HHCCH
T ss_conf 55878
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=98.08 E-value=2.1e-05 Score=49.46 Aligned_cols=59 Identities=24% Similarity=0.472 Sum_probs=40.0
Q ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCC---------CCC-CEEEECEEEEC
Q ss_conf 88889978975799909999954249800799999189989878252332489---------999-44640159941
Q 006523 252 KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP---------GTG-MWECVDFYPVA 318 (642)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~---------~~g-mwECPdlf~l~ 318 (642)
.+++||.|++ .+|+|||+-.. .| +.+|+|+||+||+..+..+...+ ..+ +| .|+++..+
T Consensus 5 ~~~~DP~v~~--~~g~yYl~~t~----~g-i~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~W-AP~v~~~~ 73 (318)
T d1gyha_ 5 VDVHDPVMTR--EGDTWYLFSTG----PG-ITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLW-APDIYQHK 73 (318)
T ss_dssp CCCSSCEEEE--ETTEEEEEESE----ET-CEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEE-EEEEEEET
T ss_pred CCCCCCEEEE--ECCEEEEEEEE----CC-EEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE-CCEEEEEC
T ss_conf 5479987999--89999999960----98-78998999889839970136886333467886789459-88899982
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.82 E-value=0.00084 Score=39.08 Aligned_cols=69 Identities=19% Similarity=0.386 Sum_probs=44.2
Q ss_pred CCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCC--------CCC-CE
Q ss_conf 992543999999988889978975799909999954249800799999189989878252332489--------999-44
Q 006523 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP--------GTG-MW 309 (642)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~--------~~g-mw 309 (642)
.||||. .++-||.|+. .+++|||+..+.....| +.+++|+||++|+..+..+...+ ..+ +|
T Consensus 3 ~NPi~~-------~~~aDP~v~~--~~~~yY~~~tt~~~~~g-~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 72 (322)
T d2exha2 3 KNPILT-------GFHPDPSICR--VGDDYYIAVSTFEWFPG-VRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVW 72 (322)
T ss_dssp ESCSBC-------SSCCSCEEEE--ETTEEEEEECCBTEESB-CEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBC
T ss_pred CCCCCC-------CCCCCCEEEE--ECCEEEEEECCCCCCCC-CEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 488779-------9899988999--89999999827888898-0899899858867956443566535457776667764
Q ss_pred EEECEEEEC
Q ss_conf 640159941
Q 006523 310 ECVDFYPVA 318 (642)
Q Consensus 310 ECPdlf~l~ 318 (642)
-|+++..+
T Consensus 73 -APev~~~~ 80 (322)
T d2exha2 73 -APHLSYSD 80 (322)
T ss_dssp -SCEEEEET
T ss_pred -CCEEEEEC
T ss_conf -62589989
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.80 E-value=0.00043 Score=40.99 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=45.6
Q ss_pred CCCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCC--------CCC-CE
Q ss_conf 992543999999988889978975799909999954249800799999189989878252332489--------999-44
Q 006523 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP--------GTG-MW 309 (642)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~--------~~g-mw 309 (642)
.||||. .+|.||.|+. .+++|||+..+. +....+.+++|+||++|+.++..+.... ..+ +|
T Consensus 3 ~NPv~~-------~~~aDP~vi~--~~~~yY~~~tt~-~~~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W 72 (317)
T d1yrza2 3 QNPILP-------GFHPDPSIVR--VGDDYYIATSTF-EWFPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIW 72 (317)
T ss_dssp ESCSBC-------SSCCSCEEEE--ETTEEEEEECCB-TEESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEEC
T ss_pred CCCCCC-------CCCCCCEEEE--ECCEEEEEECCC-CCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 388779-------9899987999--899999997168-888975999899878976987454676324567886666062
Q ss_pred EEECEEEEC
Q ss_conf 640159941
Q 006523 310 ECVDFYPVA 318 (642)
Q Consensus 310 ECPdlf~l~ 318 (642)
.|++...+
T Consensus 73 -AP~v~~~~ 80 (317)
T d1yrza2 73 -APCLSYHD 80 (317)
T ss_dssp -SCEEEEET
T ss_pred -CCEEEEEC
T ss_conf -32379999
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.68 E-value=0.00043 Score=40.94 Aligned_cols=71 Identities=17% Similarity=0.217 Sum_probs=46.7
Q ss_pred CCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCC----------C-CCCEEEECEEEECCC
Q ss_conf 88889978975799909999954249800799999189989878252332489----------9-994464015994116
Q 006523 252 KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----------G-TGMWECVDFYPVAIN 320 (642)
Q Consensus 252 ~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~----------~-~gmwECPdlf~l~~~ 320 (642)
.-.+||.|+ + .+|+|||+-.. .| +.+|+|+||++|+..+.++...+ . .++| -|++...+
T Consensus 22 ~~~~DP~i~-~-~~g~yY~~~t~----~g-i~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~W-AP~v~~~~-- 91 (312)
T d1wl7a1 22 LWAHDPVIA-K-EGSRWYVFHTG----SG-IQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLW-APDICFYN-- 91 (312)
T ss_dssp CBCSSCEEE-E-ETTEEEEEESE----ET-CEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEE-EEEEEEET--
T ss_pred CCCCCCEEE-E-ECCEEEEEEEC----CC-CEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEE-CCEEEEEC--
T ss_conf 472798799-9-99999999911----99-219992898984388502457742233467755678467-36689829--
Q ss_pred CCCCEEECCCCCCEEEEEEEECCCC
Q ss_conf 9633010468998089996641899
Q 006523 321 GSVGLDTSATGPGIKHVLKASLDDT 345 (642)
Q Consensus 321 ~~~gl~~~~~g~~~k~vl~~s~~~~ 345 (642)
.|++|-.+....
T Consensus 92 -------------g~yyl~~t~~~~ 103 (312)
T d1wl7a1 92 -------------GIYYLYYSVSTF 103 (312)
T ss_dssp -------------TEEEEEEEECCT
T ss_pred -------------CEEEEEEEEECC
T ss_conf -------------979999995148
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.66 E-value=0.0014 Score=37.57 Aligned_cols=68 Identities=18% Similarity=0.275 Sum_probs=43.0
Q ss_pred CCEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCCCC--------CCC-CEE
Q ss_conf 92543999999988889978975799909999954249800799999189989878252332489--------999-446
Q 006523 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP--------GTG-MWE 310 (642)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~~g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~~~--------~~g-mwE 310 (642)
||||. .++-||.|+ + .+++|||+..+.. ....+.+++|+||.+|+.++..+...+ ..+ +|
T Consensus 3 NPv~~-------~~~aDP~v~-~-~~~~yY~~~tt~~-~~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~W- 71 (321)
T d1y7ba2 3 NPILR-------GFNPDPSIC-R-ADTDYYIATSTFE-WFPGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIW- 71 (321)
T ss_dssp SCSBC-------SSCCSCEEE-E-ETTEEEEEECCBT-EESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEEC-
T ss_pred CCCCC-------CCCCCCEEE-E-ECCEEEEEEECCC-CCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 89689-------999998899-9-9999999982688-88972899899736777915544577535557776667644-
Q ss_pred EECEEEEC
Q ss_conf 40159941
Q 006523 311 CVDFYPVA 318 (642)
Q Consensus 311 CPdlf~l~ 318 (642)
-|++...+
T Consensus 72 AP~v~~~~ 79 (321)
T d1y7ba2 72 APDLSYHD 79 (321)
T ss_dssp SCEEEEET
T ss_pred CCEEEEEC
T ss_conf 74279999
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.88 E-value=0.01 Score=32.05 Aligned_cols=10 Identities=50% Similarity=0.594 Sum_probs=4.8
Q ss_pred CCCEEEEEEE
Q ss_conf 9990999995
Q 006523 264 PDGKWRLTIG 273 (642)
Q Consensus 264 ~~g~w~miiG 273 (642)
.+|+++|++.
T Consensus 138 ~DG~~~LfYT 147 (440)
T d1oyga_ 138 SDGKIRLFYT 147 (440)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEEE
T ss_conf 6994999997
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=92.77 E-value=0.2 Score=23.68 Aligned_cols=104 Identities=17% Similarity=0.098 Sum_probs=57.5
Q ss_pred EE-EEEEEECCCCCEEEEEECCCC----CCCCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECC
Q ss_conf 69-613999139909999902579----9611299999759999972039971899254399999998888997897579
Q 006523 190 VW-TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (642)
Q Consensus 190 v~-SGSavv~~dG~~~l~YTG~~~----~~~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~ 264 (642)
+| .++.+..+||.++++|.+... .....+.+.+|.|+| .+|... ..|...+.+.....+.+|.++....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred EEEECEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCC----CCCCCC--EEEECCCCCCCCCCCCCCEEEEECC
T ss_conf 3670789998999999999646489988887329999906899----787788--8732388877643446624899689
Q ss_pred CCEEEEEEEEECC---------------CEEEEEEEEECC-CCCCEECCCC
Q ss_conf 9909999954249---------------800799999189-9898782523
Q 006523 265 DGKWRLTIGSKIG---------------KTGISLVYQTTD-FKTYELLDEY 299 (642)
Q Consensus 265 ~g~w~miiGs~~~---------------~~G~~~lY~S~D-l~~W~~~~~l 299 (642)
+|.-++....... ....+.++.|+| ..+|.....+
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~ 144 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTIT 144 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECG
T ss_pred CCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 983999996403577444333678778747999998368765210465205
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=89.90 E-value=0.4 Score=21.80 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=63.3
Q ss_pred CCEEEEEEEECCCCCEEEEEECCCCCC--CCEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCC
Q ss_conf 976961399913990999990257996--112999997599999720399718992543999999988889978975799
Q 006523 188 NGVWTGSATILPDGQIVMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (642)
Q Consensus 188 ~Gv~SGSavv~~dG~~~l~YTG~~~~~--~q~q~lA~S~D~~d~ll~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~~ 265 (642)
.-||-.+|....+|++++++--..++. ...++++.+.+. .+|+..+ +|+. ..-||.+.+ .+
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~-----~~f~~~~-~p~~---------glEDPrvt~--i~ 89 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK-----DEFTAVP-ELSW---------ELEDPYIAK--IN 89 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET-----TEEEECT-TCCB---------SCEEEEEEE--ET
T ss_pred CCEECCCCEEEECCEEEEEEEEECCCCCEEEEEEEEEECCC-----CCEEECC-CCCC---------CCCCCCEEE--EC
T ss_conf 41316775788999999999987067631789999973598-----3358778-5113---------677887773--99
Q ss_pred CEEEEEEEEECCCEEEEEEEEECCCCCCEECCCCCCC
Q ss_conf 9099999542498007999991899898782523324
Q 006523 266 GKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (642)
Q Consensus 266 g~w~miiGs~~~~~G~~~lY~S~Dl~~W~~~~~l~~~ 302 (642)
|+|+|-..+.....+.+.+|++.|+..|+.....+..
T Consensus 90 g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l~~f~~ 126 (310)
T d2b4wa1 90 NEMIFGGTRVRKNGNAILSYYGYFYRGTPDELTYFTR 126 (310)
T ss_dssp TEEEEEEEEEC-----CCCEEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEEECCCCCCCEEEEEEEEECCHHCCCEEEC
T ss_conf 9999999996688986307996555255001751303
|