Citrus Sinensis ID: 006607

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
Protein Sequence
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcccHHHcccccccEEEcccHHHHHHHcccccccccHHHHHHHHcccccccHHHHHHHHHcccccccccccccEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccccEEEEEEccccEEcccccHHHHHHHHHHHHHHHHHcccEEEEccccccHHHccccccHHHHcccccccEEEEccccHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHcccHHHcccEEEEccccccccEEEEEcccccHHHHHccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHccccccccHHHHHHHHHHHHHHHHHcccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEccHHHHHcccccHEEEEcccHcHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHccccHHcccccccccEEEEEEcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHccccEEEEEEcccccEccccHHHHHHHHHHHHHHHHHHHcccEEEEEHHHccHHHHccccEEEEEEcccccEEEEEcccHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHccHHHHHHEEEEccccccccEEEEEEccccHHHHHccccccEEEEcccccHHHHHcHcccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCfigsrkserdyaYFLIFPFLLLRMLHDQIWISLSRYRTAKrnnrivdkaiefdqvdrernwddqiVFNGLIFYIVRMlippsysnlrfwrsdGVILTILVHMGPVEFLYYWFHRALHHHYLysryhshhhssvvtepitsviHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFmnnmghcnfefipmwlftvfpplkflmytpsyhslhhtqfrtnyslfmpiydyiygtidrssdsVYEKSLkrsgeeeeesaddvdvvhlthlttpesiYHLRIGFaslaskphrytYTLSQWYLQLLWPFTASCSVLVSWIYGrtfvsesntldklklqtwVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLlnqgeelnrngeiylerqpnklkikvVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTsyaahktkiwlvgddltgkeqarapkgtifipytqipprklrkdcfyhstpamiippslsnmhsceNWLGRRVMSAWRIAGIIHALegwdlnecgqtmcDIHQVWHAslrhgfrplfpva
Flexible Loop (DISEMBL)
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSryrtakrnnrivdkaiefdqvdrernwdDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRsgeeeeesaddvdvVHLTHLttpesiyhLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVsesntldklklqtwvVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLstsyaahktkiWLVGDDLTGKeqarapkgtifipytqipprkLRKDCFYHStpamiippslsNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Low Complexity Region (SEG)
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFhralhhhylysryhshhhssVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGeeeeeSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGtvtankvanavaSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered region (IsUnstruct)
****NVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTID************************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISOPRED)
****NVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVY***********EESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD************AQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLF***
Disordered Region (DISEMBL)
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSS*********************VDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Disordered Region (DISPRO)
*Y*TNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFP**
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYSTNVNVDGIIYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPLFPVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	639	2.2.26 [Sep-21-2011]
F4HVY0	625	Protein ECERIFERUM 1 OS=A	yes	no	0.938	0.96	0.625	0.0
F4HVX7	627	Protein CER1-like 1 OS=Ar	no	no	0.938	0.956	0.569	0.0
F4IR05	613	Protein CER1-like 2 OS=Ar	no	no	0.915	0.954	0.562	0.0
Q8H1Z0	632	Protein ECERIFERUM 3 OS=A	no	no	0.940	0.950	0.347	1e-101
Q8J207	356	C-5 sterol desaturase OS=	N/A	no	0.220	0.396	0.266	6e-08
Q6ZNB7	445	Alkylglycerol monooxygena	yes	no	0.194	0.278	0.300	5e-06
Q7SBB6	344	Probable C-5 sterol desat	N/A	no	0.220	0.409	0.24	3e-05
Q8BS35	447	Alkylglycerol monooxygena	yes	no	0.194	0.277	0.274	0.0001
Q5M8F9	446	Alkylglycerol monooxygena	yes	no	0.195	0.280	0.263	0.0001
Q96IV6	333	Uncharacterized protein C	no	no	0.291	0.558	0.213	0.0001

>sp|F4HVY0|CER1_ARATH Protein ECERIFERUM 1 OS=Arabidopsis thaliana GN=CER1 PE=1 SV=1

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/619 (62%), Positives = 494/619 (79%), Gaps = 19/619 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           +++V+APWA+HS Y F+     +RD  YFL+FPFLL R+LH+Q+WISLSRY T+    RI
Sbjct: 20  KYIVIAPWAVHSTYRFVTDDPEKRDLGYFLVFPFLLFRILHNQVWISLSRYYTSSGKRRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK I+F+QVDRE NWDDQI+FNG++FYI   L+P +   L +WR+DGV++  L+H GPV
Sbjct: 80  VDKGIDFNQVDRETNWDDQILFNGVLFYIGINLLPEA-KQLPWWRTDGVLMAALIHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW H+ALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAEHI YF+LFAIPL+TT++ 
Sbjct: 139 EFLYYWLHKALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFILFAIPLLTTLLT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
           K ASI SF GYIIY+DFMNNMGHCNFE IP  LF +FPPLKFL YTPSYHSLHHTQFRTN
Sbjct: 199 KTASIISFAGYIIYIDFMNNMGHCNFELIPKRLFHLFPPLKFLCYTPSYHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP+YDYIYGT+D S+D++YEK+L+R         D VDVVHLTHLTTPESIYHLRI
Sbjct: 259 YSLFMPLYDYIYGTMDESTDTLYEKTLERGD-------DIVDVVHLTHLTTPESIYHLRI 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           G AS AS P  Y     +W+++LLWPFT S S++ +  Y R FV+E N+ +KL LQ+WV+
Sbjct: 312 GLASFASYPFAY-----RWFMRLLWPFT-SLSMIFTLFYARLFVAERNSFNKLNLQSWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           PRY +QY L WR+EAIN++IE+AILEAD KGVKV+SLGL+NQGEELNRNGE+Y+   P+ 
Sbjct: 366 PRYNLQYLLKWRKEAINNMIEKAILEADKKGVKVLSLGLMNQGEELNRNGEVYIHNHPD- 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           +K+++VDGS LAAAVV+NS+PK T  V++ G +T  KVA  +AS+LCQ G++V+T+  D+
Sbjct: 425 MKVRLVDGSRLAAAVVINSVPKATTSVVMTGNLT--KVAYTIASALCQRGVQVSTLRLDE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           YEK++  +P E + +LV  TS A    K+WLVG+  T +EQ +A KGT+FIP++Q P ++
Sbjct: 483 YEKIRSCVPQECRDHLVYLTSEALSSNKVWLVGEGTTREEQEKATKGTLFIPFSQFPLKQ 542

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT--M 617
           LR+DC YH+TPA+I+P SL N+HSCENWL R+ MSA R+AGI+HALEGW+++ECG +  +
Sbjct: 543 LRRDCIYHTTPALIVPKSLVNVHSCENWLPRKAMSATRVAGILHALEGWEMHECGTSLLL 602

Query: 618 CDIHQVWHASLRHGFRPLF 636
            D+ QVW A L HGF+PL 
Sbjct: 603 SDLDQVWEACLSHGFQPLL 621

Aldehyde decarbonylase involved in the conversion of aldehydes to alkanes. Core component of a very-long-chain alkane synthesis complex. Involved in epicuticular wax biosynthesis and pollen fertility.
Arabidopsis thaliana (taxid: 3702)

>sp|F4HVX7|CERL1_ARATH Protein CER1-like 1 OS=Arabidopsis thaliana GN=At1g02190 PE=2 SV=1

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/623 (56%), Positives = 459/623 (73%), Gaps = 23/623 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           +++++AP  M S++ ++ +   E+D +  +I   +L R++H QIWIS+SR RTAK  N+I
Sbjct: 20  KYLLVAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVHSQIWISVSRQRTAKGTNKI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRER WDDQ++FN L+ Y+  + +P + S+L  WR DG IL  L+H GPV
Sbjct: 80  VDKPIEFEQVDRERTWDDQVIFNTLLMYLANIKLPGA-SHLPPWRLDGAILMALLHAGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYWFHRALHHH+LYSRYHSHHHSS+VTEPITSV+HPFAEHI Y LLFAIP+VT  + 
Sbjct: 139 EFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAEHIAYTLLFAIPMVTASLC 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
              SI S +GYI Y+DFMNNMGHCNFE  P  LF +FPPLKFL YTPS+HSLHHTQFRTN
Sbjct: 199 GILSIVSIMGYITYIDFMNNMGHCNFELFPKRLFHLFPPLKFLCYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMPIYD+IYGT D  +DS+YE+SL    E EEES    DV+HLTHLTT  SIY +R+
Sbjct: 259 YSLFMPIYDFIYGTTDNLTDSLYERSL----EIEEESP---DVIHLTHLTTHNSIYQMRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS-VLVSWIYGRTFVSESNTLDKLKLQTW 377
           GF SL+S P    ++   WYL   +WPFT  CS  L S I  RTFV E N L  L + + 
Sbjct: 312 GFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSFALTSAIPLRTFVFERNRLRDLTVHSH 368

Query: 378 VVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQP 437
           ++P++   Y      E+IN++IEEAILEAD KGVKV+SLGL+N  EELN +GE+Y+++ P
Sbjct: 369 LLPKFSFHYKSQRHHESINTIIEEAILEADEKGVKVMSLGLMNNREELNGSGEMYVQKYP 428

Query: 438 NKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497
            KLKI++VDGSS+AA VV+N++PK    ++ RG +T  KVA+AV  +LCQ G+KV  + +
Sbjct: 429 -KLKIRLVDGSSMAATVVINNIPKEATEIVFRGNLT--KVASAVVFALCQKGVKVVVLRE 485

Query: 498 DDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPP 557
           +++ KL   I      NLVLSTS + +  K+WLVGD +  +EQ +A +GT+F+P++  PP
Sbjct: 486 EEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLVGDGIENEEQMKAKEGTLFVPFSHFPP 542

Query: 558 RKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTM 617
            KLRKDCFY STPAM +P S  N+ SCENWLGRRVMSAW+I GI+HALEGW+ ++CG T 
Sbjct: 543 NKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRRVMSAWKIGGIVHALEGWEEHDCGNT- 601

Query: 618 CDI---HQVWHASLRHGFRPLFP 637
           C++   H +W A+LRH F+PL P
Sbjct: 602 CNVLRLHAIWEAALRHDFQPLPP 624

Arabidopsis thaliana (taxid: 3702)

>sp|F4IR05|CERL2_ARATH Protein CER1-like 2 OS=Arabidopsis thaliana GN=At2g37700 PE=2 SV=1

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/620 (56%), Positives = 442/620 (71%), Gaps = 35/620 (5%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++++LAP    SIY    S  + RD+   LI    + R++H QIWISLSRY+TAK   RI
Sbjct: 20  KYLLLAPLVFDSIY----SYATIRDHEKLLIVAVTVWRIVHSQIWISLSRYQTAKGTKRI 75

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           ++K+IEFDQVDRER WDDQI+FN LI Y+ ++ +  + S + FWR+DGVIL  L+H GPV
Sbjct: 76  LNKSIEFDQVDRERTWDDQIIFNTLIVYLTKVYVSGT-STIPFWRTDGVILVALLHAGPV 134

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EF+YYWFHRALHHH+LYSRYHSHHHSS+VTEPITSV+HPFAEHI Y L+  +PL+TT + 
Sbjct: 135 EFIYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAEHIGYTLILGLPLITTFMC 194

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
              S+ S   Y+ Y+DFMNNMGHCNFE IP +LF++ PPLKFL YTPS+HSLHHTQFRTN
Sbjct: 195 GTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLFSLLPPLKFLCYTPSFHSLHHTQFRTN 254

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP+YDYIYGT D  SDS+YE SL    E+EEE     D +HLTHLT+ +SIYHLR+
Sbjct: 255 YSLFMPMYDYIYGTTDECSDSLYETSL----EKEEEKP---DAIHLTHLTSLDSIYHLRL 307

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFASL+S P       S+ YL L+ PF    S ++     +TFV E N    L L + ++
Sbjct: 308 GFASLSSHPLS-----SRCYLFLMKPFALILSFILRSFSFQTFVVERNRFRDLTLHSHLL 362

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P++   Y    ++E IN +IE AILEAD KGVKV+SLGLLNQGEELN  GE+Y+ R P K
Sbjct: 363 PKFSSHYMSHQQKECINKMIEAAILEADKKGVKVMSLGLLNQGEELNGYGEMYVRRHP-K 421

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKI++VDG SLAA VV++S+P  T  VL RG +T  KVA A+  SLCQ  IKV  + K++
Sbjct: 422 LKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQIT--KVARAIVFSLCQNAIKVMVLRKEE 479

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           +  L   +  + + NL            IWLVGD L+ KEQ  A  GT+F+P++Q PP+ 
Sbjct: 480 HSMLAEFLDDKCKENL------------IWLVGDGLSTKEQKMAKDGTLFLPFSQFPPKT 527

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECG---QT 616
           LRKDCFYH+TPAMIIP S  N+ SCENWLGRRVMSAWR+ GI+HALEGW  +ECG    +
Sbjct: 528 LRKDCFYHTTPAMIIPHSAQNIDSCENWLGRRVMSAWRVGGIVHALEGWKEHECGLDDNS 587

Query: 617 MCDIHQVWHASLRHGFRPLF 636
           + +  +VW A+LR+GF+PL 
Sbjct: 588 IINPPRVWEAALRNGFQPLL 607

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H1Z0|CER3_ARATH Protein ECERIFERUM 3 OS=Arabidopsis thaliana GN=CER3 PE=1 SV=1

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/622 (34%), Positives = 340/622 (54%), Gaps = 21/622 (3%)

Query: 19  VQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNR 78
           +++++ AP A   +Y ++      +      I     L+ L  ++W   +      R  R
Sbjct: 16  LKYLLYAPLAAQVVYSWVYEEDISKVLWCIHILIICGLKALVHELWSVFNNMLFVTRTLR 75

Query: 79  IVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPP---SYSNLRFWRSDGVILTILVH 135
           I  K I+F Q+D E +WD+ I+   +I  ++  + PP     ++L  W + G+I  I++H
Sbjct: 76  INPKGIDFKQIDHEWHWDNYIILQAIIVSLICYMSPPLMMMINSLPLWNTKGLIALIVLH 135

Query: 136 MGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLV 194
           +   E LYY+ HR+ H ++Y ++ YHS HHSS V  P+T+      E+I+  ++  +PL+
Sbjct: 136 VTFSEPLYYFLHRSFHRNNYFFTHYHSFHHSSPVPHPMTAGNATLLENIILCVVAGVPLI 195

Query: 195 TTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254
              +    S+++  GY +  DFM  +GHCN E     LF + P L++L+YTP+YHSLHH 
Sbjct: 196 GCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLRYLIYTPTYHSLHHQ 255

Query: 255 QFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESI 314
           +  TN+ LFMP++D +  T + +S  + +K    +GE +       + V L H     S 
Sbjct: 256 EMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP----EFVFLAHGVDVMSA 311

Query: 315 YHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKL 374
            H    F S AS P+      ++ +L  +WPFT  C +L  W + +TF+    TL     
Sbjct: 312 MHAPFVFRSFASMPYT-----TRIFLLPMWPFTF-CVMLGMWAWSKTFLFSFYTLRNNLC 365

Query: 375 QTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE 434
           QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL  LN+ E LN  G +++ 
Sbjct: 366 QTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALNKNEALNGGGTLFVN 425

Query: 435 RQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKV-- 492
           + P+ L+++VV G++L AAV++  +PK    V L G  +  K+  A+A  LC+ G++V  
Sbjct: 426 KHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATS--KLGRAIALYLCRRGVRVLM 482

Query: 493 ATICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTGKEQARAPKGTIFIP 551
            T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT +EQ+ AP GT F  
Sbjct: 483 LTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQ 542

Query: 552 YTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN 611
           +   P  K R++C Y    AM +P  +  + +CE  + R V+ A    G++H LEGW  +
Sbjct: 543 FVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACHAGGVVHMLEGWKHH 602

Query: 612 ECGQTMCD-IHQVWHASLRHGF 632
           E G    D I  VW A++++G 
Sbjct: 603 EVGAIDVDRIDLVWEAAMKYGL 624

Involved in cuticule membrane and wax production, and in the typhine and sopropollenin biosynthesis of pollen. May act as an aldehyde-generating acyl-CoA reductase.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8J207|ERG3_LEPMC C-5 sterol desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1

 Score = 59.7 bits (143), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 24/165 (14%)

Query: 144 YWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHP---FAEHIVYFLL-FAIPLVTTMV 198
           YW HR LHH  +Y   H  HH  ++  P  S   HP   +A+ + Y++  F  PL     
Sbjct: 189 YWIHRGLHHPMVYKHIHKPHHKWIMPTPFASHAFHPIDGYAQGLPYYIFPFLFPLS---- 244

Query: 199 LKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRT 258
            K AS+A FV   I+   +++  + +   I              +   + H++HH  F  
Sbjct: 245 -KIASVAFFVFVNIWTVLIHDGEYAHNSPI--------------INGAACHTMHHLYFNY 289

Query: 259 NYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVV 303
           NY  F  ++D + G+  + +D ++++ LK   +E  + A  VD++
Sbjct: 290 NYGQFTTLWDRLGGSYRKPNDELFKRELKMCQDEWNKQAKAVDMM 334

Catalyzes the introduction of a C-5 double bond in the B ring of ergosterol. May contribute to the regulation of ergosterol biosynthesis.

Leptosphaeria maculans (taxid: 5022)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: -

>sp|Q6ZNB7|ALKMO_HUMAN Alkylglycerol monooxygenase OS=Homo sapiens GN=AGMO PE=1 SV=1

 Score = 53.5 bits (127), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 29/153 (18%)

Query: 139 VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVY--FLLFAIP 192
           V+F YYWFHR  H   +    H  HHSS    + T    SV+  +   I Y    LF  P
Sbjct: 124 VDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLSTALRQSVLQIYTSWIFYSPLALFIPP 183

Query: 193 LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLH 252
            V  + L+   +  F    I+ + +NN+G                PL+ ++ TPS+H +H
Sbjct: 184 SVYAVHLQFNLLYQF---WIHTEVINNLG----------------PLELILNTPSHHRVH 224

Query: 253 HTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 281
           H + R     NY+  + I+D I+GT +  ++ V
Sbjct: 225 HGRNRYCIDKNYAGVLIIWDKIFGTFEAENEKV 257

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|Q7SBB6|ERG3_NEUCR Probable C-5 sterol desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1

 Score = 50.8 bits (120), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 34/175 (19%)

Query: 139 VEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHP---FAEHIVYFLL-FAIPL 193
            +F  YW HR LHH  +Y   H  HH  ++  P  S   HP   FA+ I Y +  F  PL
Sbjct: 173 TDFGIYWIHRGLHHPLVYKHLHKPHHKWIMPTPYASHAFHPIDGFAQSIPYHIFPFIFPL 232

Query: 194 VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTP-----SY 248
                       ++VG  ++++F   M H                 ++    P     + 
Sbjct: 233 ---------QKMAYVGLFVFINFWTIMIHDG---------------EYYANNPVINGAAC 268

Query: 249 HSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVV 303
           HS+HH  F  NY  F  ++D + G+       ++ K  K S    ++  ++++ +
Sbjct: 269 HSVHHFAFNYNYGQFTTLWDRLGGSYREPDGDMFAKEKKMSTTTWKKQVNEMEKI 323

Catalyzes the introduction of a C-5 double bond in the B ring of ergosterol. May contribute to the regulation of ergosterol biosynthesis.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 1

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: -

>sp|Q8BS35|ALKMO_MOUSE Alkylglycerol monooxygenase OS=Mus musculus GN=Agmo PE=2 SV=1

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 29/153 (18%)

Query: 139 VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVY--FLLFAIP 192
           V+F YYWFHR  H   ++   H  HHSS    + T    SV+  ++  + Y    LF  P
Sbjct: 124 VDFGYYWFHRMAHEINIFWAAHQAHHSSEDYNLSTALRQSVLQQYSSWVFYCPLALFIPP 183

Query: 193 LVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLH 252
            V  + ++   +  F    I+ + +  +G                PL+ ++ TPS+H +H
Sbjct: 184 SVFAVHIQFNLLYQF---WIHTEIIRTLG----------------PLEVILNTPSHHRVH 224

Query: 253 HTQFR----TNYSLFMPIYDYIYGTIDRSSDSV 281
           H + R     NY+  + I+D I+GT +  ++ V
Sbjct: 225 HGRNRYCIDKNYAGTLIIWDRIFGTFEAENEQV 257

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|Q5M8F9|ALKMO_XENTR Alkylglycerol monooxygenase OS=Xenopus tropicalis GN=agmo PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 27/152 (17%)

Query: 139 VEFLYYWFHRALHHHYLYSRYHSHHHSS----VVTEPITSVIHPFAEHIVYF-LLFAIPL 193
           V+F YYWFHR  H   +    H  HHSS    + T    S I  +   + Y+ + F IP 
Sbjct: 123 VDFGYYWFHRMAHEVNIMWAGHQTHHSSEDYNLTTALRQSFIQKYFSWMFYWPMAFCIP- 181

Query: 194 VTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHH 253
             ++   +        + I+ + +NN+G                PL++++ TPS+H +HH
Sbjct: 182 -PSVFAVHIQFNLLYQFWIHTELINNLG----------------PLEWILNTPSHHRVHH 224

Query: 254 TQ----FRTNYSLFMPIYDYIYGTIDRSSDSV 281
            +      +NY+  + I+D ++GT     + V
Sbjct: 225 GRNPYCIDSNYAGTLIIWDRMFGTFVPEKEKV 256

Glyceryl-ether monooxygenase that cleaves the O-alkyl bond of ether lipids. Ether lipids are essential components of brain membranes.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 5

>sp|Q96IV6|CE004_HUMAN Uncharacterized protein C5orf4 OS=Homo sapiens GN=C5orf4 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 44/230 (19%)

Query: 67  LSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSD 126
           +SRYR     N  VD  ++  Q  R   ++  ++   ++ ++        Y  L++WR  
Sbjct: 110 ISRYRIQVGKNEPVD-PVKLRQSIRTVLFNQCMISFPMVVFL--------YPFLKWWRDP 160

Query: 127 G---------VILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIH 177
                      +L + +     E L+Y+ HR LHH   Y + H  HH    T PI  VI 
Sbjct: 161 CRRELPTFHWFLLELAIFTLIEEVLFYYSHRLLHHPTFYKKIHKKHHEW--TAPI-GVIS 217

Query: 178 PFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFE--FIPMWLFTV 235
            +A  I + +   +P++   ++  + ++S   +      +  + HC +   F+P      
Sbjct: 218 LYAHPIEHAVSNMLPVIVGPLVMGSHLSSITMWFSLALIITTISHCGYHLPFLP------ 271

Query: 236 FPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKS 285
                    +P +H  HH +F   Y + + + D+++GT     D++++++
Sbjct: 272 ---------SPEFHDYHHLKFNQCYGV-LGVLDHLHGT-----DTMFKQT 306

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	639
359489252	619	PREDICTED: protein WAX2-like [Vitis vini	0.932	0.962	0.660	0.0
359489254	619	PREDICTED: protein WAX2-like [Vitis vini	0.932	0.962	0.662	0.0
297734710	631	unnamed protein product [Vitis vinifera]	0.929	0.941	0.657	0.0
359489250	619	PREDICTED: protein WAX2-like [Vitis vini	0.932	0.962	0.652	0.0
356520717	624	PREDICTED: protein WAX2-like [Glycine ma	0.935	0.958	0.652	0.0
359489248	619	PREDICTED: protein WAX2-like [Vitis vini	0.932	0.962	0.652	0.0
356504497	627	PREDICTED: protein WAX2-like [Glycine ma	0.929	0.947	0.653	0.0
297734709	2763	unnamed protein product [Vitis vinifera]	0.918	0.212	0.652	0.0
225454042	620	PREDICTED: protein WAX2 [Vitis vinifera]	0.932	0.961	0.636	0.0
225454040	620	PREDICTED: protein WAX2 [Vitis vinifera]	0.932	0.961	0.638	0.0

>gi|359489252|ref|XP_002263787.2| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/616 (66%), Positives = 501/616 (81%), Gaps = 20/616 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H++Y F+   + ERD A+FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAMYSFLVKDEKERDVAHFLIFPFLLWRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFY+    +P + S++  WR+DGV++TIL+H GPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYVAYFTLPGA-SHMPLWRADGVVVTILLHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTVIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
              SI SFVGYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPS+HSLHHTQFRTN
Sbjct: 199 GTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YDY+YGT+D+SSD +YEKSL R     EES    DVVHLTHLTTP+SIYH+R+
Sbjct: 259 YSLFMPFYDYMYGTMDKSSDVLYEKSLTRP----EESP---DVVHLTHLTTPDSIYHIRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFAS+ASKP+     +S+WYL+L+WP T+S  +L+ WI  RTFV E N  +KLKLQTWV+
Sbjct: 312 GFASVASKPY-----ISKWYLRLMWPLTSSYMMLI-WICSRTFVLERNHFNKLKLQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y +QY L W+ E INSLIEEAIL+A+ +GV V+SLGLLNQGEELN  GE+Y+ R P K
Sbjct: 366 PKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNVLSLGLLNQGEELNIYGELYIHRNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+VAT  +++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTALALCQKGIQVATFHEEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           Y K+ +++  +    L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 YAKINMKLNTKLGGKLALSKNYAH---KIWLVGDGLTKEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  NM SCENWL RR MSAWR+AGI+HALEGW+++ECG  + D
Sbjct: 540 MRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHAIFD 599

Query: 620 IHQVWHASLRHGFRPL 635
           I ++W ASL+HGFRPL
Sbjct: 600 IEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489254|ref|XP_002265189.2| PREDICTED: protein WAX2-like [Vitis vinifera] gi|297734711|emb|CBI16762.3| unnamed protein product [Vitis vinifera]

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/616 (66%), Positives = 502/616 (81%), Gaps = 20/616 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H+IY F+   + ERD ++FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAIYSFVVKDEKERDISHFLIFPFLLWRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFYI    +P   +++ FWR+DGV++TIL+HMGPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYITYFTVPGG-THMPFWRADGVVITILLHMGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYWFHRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWFHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTVIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
              SI SFVGYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPS+HSLHHTQFRTN
Sbjct: 199 GTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YDYIYGT+D+SSD +YEKSL R     EES    DVVHLTHLTTP+SIYH+R+
Sbjct: 259 YSLFMPFYDYIYGTVDKSSDVLYEKSLTRP----EESP---DVVHLTHLTTPDSIYHMRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFAS+ASKP+     +S+WYL+L+WP T+   +L+ WI  RTFV E N  +KLKLQTWV+
Sbjct: 312 GFASVASKPY-----ISKWYLRLMWPLTSWYMMLI-WICSRTFVLERNHFNKLKLQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y +QY L  + E INSLIEEAIL+AD +GVKV+SLG+LNQGEELN  GE+Y+ R P K
Sbjct: 366 PKYRIQYFLKGQNEPINSLIEEAILDADQRGVKVLSLGILNQGEELNIYGELYIHRNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+VAT  +++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTALALCQKGIQVATFHEEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           Y  + +++  +    L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 YANINMKLNTKLGGKLALSKNYAH---KIWLVGDGLTEEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  +M SCENWL RR MSAWR+AGI+HALEGW+++ECG T+ +
Sbjct: 540 MRKDCFYHTTPAMMSPTSFEDMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHTIFN 599

Query: 620 IHQVWHASLRHGFRPL 635
           I ++W ASL+HGFRPL
Sbjct: 600 IEKIWEASLQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734710|emb|CBI16761.3| unnamed protein product [Vitis vinifera]

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/614 (65%), Positives = 499/614 (81%), Gaps = 20/614 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H++Y F+   + ERD A+FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAMYSFLVKDEKERDVAHFLIFPFLLWRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFY+    +P + S++  WR+DGV++TIL+H GPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYVAYFTLPGA-SHMPLWRADGVVVTILLHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTVIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
              SI SFVGYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPS+HSLHHTQFRTN
Sbjct: 199 GTRSIVSFVGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YDY+YGT+D+SSD +YEKSL R     EES    DVVHLTHLTTP+SIYH+R+
Sbjct: 259 YSLFMPFYDYMYGTMDKSSDVLYEKSLTRP----EESP---DVVHLTHLTTPDSIYHIRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFAS+ASKP+     +S+WYL+L+WP T+S  +L+ WI  RTFV E N  +KLKLQTWV+
Sbjct: 312 GFASVASKPY-----ISKWYLRLMWPLTSSYMMLI-WICSRTFVLERNHFNKLKLQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y +QY L W+ E INSLIEEAIL+A+ +GV V+SLGLLNQGEELN  GE+Y+ R P K
Sbjct: 366 PKYRIQYFLKWQNEPINSLIEEAILDAEQRGVNVLSLGLLNQGEELNIYGELYIHRNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+VAT  +++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTALALCQKGIQVATFHEEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           Y K+ +++  +    L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 YAKINMKLNTKLGGKLALSKNYAH---KIWLVGDGLTKEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  NM SCENWL RR MSAWR+AGI+HALEGW+++ECG  + D
Sbjct: 540 MRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHAIFD 599

Query: 620 IHQVWHASLRHGFR 633
           I ++W ASL+HGF+
Sbjct: 600 IEKIWEASLQHGFQ 613

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489250|ref|XP_003633900.1| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/616 (65%), Positives = 501/616 (81%), Gaps = 20/616 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H+I+ F+   + ERD A+FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAIHSFLVKDEKERDVAHFLIFPFLLSRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFYI   ++P + S++  WR+DGV++TIL+H GPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYIAYFILPGA-SHMPLWRADGVVITILLHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTMIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
           + +S+ +F GYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPS+HSLHHTQFRTN
Sbjct: 199 RTSSVVAFFGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YD++YGT+D+SSD +YEKSL R     EES    DVVHLTHLTTP SIYH+R+
Sbjct: 259 YSLFMPFYDFMYGTMDKSSDVLYEKSLTRP----EESP---DVVHLTHLTTPNSIYHIRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFAS+ASKP+     +S+WYL+L+WP T+S  +L+ WI  RTFV E N  +KLK QTWV+
Sbjct: 312 GFASVASKPY-----ISKWYLRLMWPLTSSYMMLI-WICSRTFVLERNHFNKLKSQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y VQY L W+ E INSLIEEAIL A+ +GVKV+SLGLLNQGEELN  G++Y+   P K
Sbjct: 366 PKYRVQYFLKWQNEPINSLIEEAILHAEERGVKVLSLGLLNQGEELNLYGKLYIHLNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+V T C+++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTAIALCQKGIQVTTFCEEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           ++K+K+++  +    L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 HKKIKMKLNTKLGDKLALSKNYAH---KIWLVGDGLTEEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  NM SCENWL RR MSAWR+AGI+HALEGW+++ECG T+ D
Sbjct: 540 MRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHTIFD 599

Query: 620 IHQVWHASLRHGFRPL 635
           I ++W AS +HGFR L
Sbjct: 600 IEKIWEASFQHGFRSL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520717|ref|XP_003529007.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/618 (65%), Positives = 488/618 (78%), Gaps = 20/618 (3%)

Query: 18  CVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNN 77
           C + V+L PW  HS Y F+ S   ERD  YFLIFP++++RMLHDQ+WI+LSR+RTAK  N
Sbjct: 18  CFKWVILTPWIAHSTYSFLVSDAKERDLGYFLIFPYMMVRMLHDQVWITLSRHRTAKGKN 77

Query: 78  RIVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMG 137
           RIVDK IEF+QVDRE NWDDQI+FNG+IFYI  ML+P S S++  WR+DGV++T L+H G
Sbjct: 78  RIVDKGIEFEQVDRESNWDDQILFNGIIFYIGYMLVPES-SHMPLWRTDGVLITALLHAG 136

Query: 138 PVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM 197
           PVEFLYYW HRALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAEHI YF+LFAIPL TT+
Sbjct: 137 PVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTV 196

Query: 198 VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR 257
           V + ASIAS+ GY+ Y+DFMNN+GHCNFE IP  +FT FP LK+LMYTPS+HSLHHTQFR
Sbjct: 197 VARTASIASYAGYLAYIDFMNNLGHCNFECIPKAIFTAFPFLKYLMYTPSFHSLHHTQFR 256

Query: 258 TNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHL 317
           TNYSLFMPIYDYIYGT+D+++D+ YE +LKR     EES+   DVVHLTHLTTPESIYHL
Sbjct: 257 TNYSLFMPIYDYIYGTMDKTTDTTYEIALKR-----EESSP--DVVHLTHLTTPESIYHL 309

Query: 318 RIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTW 377
           R+GFASLAS+P       S WYL L+WP T   S+LV+W YG+TFV E N    L LQ+W
Sbjct: 310 RLGFASLASRPQS-----STWYLSLMWPLTL-WSILVTWFYGQTFVMERNAFKMLNLQSW 363

Query: 378 VVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQP 437
           V+PR+ VQY   W+ E +N LIEEAIL+A+   VKV+SLGL NQG+  N+ GE+Y++R P
Sbjct: 364 VIPRFHVQYLFKWQSETLNKLIEEAILQAELSKVKVLSLGLSNQGDSFNKYGELYIKRYP 423

Query: 438 NKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK 497
            +LKIK+VDGSSL  A+VVNS+PK    VLL G    NKV+ A+AS+LC+ G KV T+ K
Sbjct: 424 -ELKIKIVDGSSLVVAIVVNSIPKEARQVLLCG--KPNKVSYAIASALCERGTKVTTMYK 480

Query: 498 DDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPP 557
           D+Y+KL+LRI  E++ NLV   SY A   KIWLVGD     EQ +APKG++FIP +Q PP
Sbjct: 481 DEYDKLQLRISNESKKNLVFPGSYTA---KIWLVGDQCDEVEQKKAPKGSLFIPISQFPP 537

Query: 558 RKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTM 617
           +KLRKDCFYHSTPAMI PPSL N+ SCENWL RRVMSAWR+AGI+HALE W +NECG  M
Sbjct: 538 KKLRKDCFYHSTPAMIAPPSLVNVDSCENWLPRRVMSAWRVAGILHALECWKVNECGNVM 597

Query: 618 CDIHQVWHASLRHGFRPL 635
             + ++W ASL+HGFRPL
Sbjct: 598 FSVEKIWQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489248|ref|XP_002265685.2| PREDICTED: protein WAX2-like [Vitis vinifera]

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/616 (65%), Positives = 499/616 (81%), Gaps = 20/616 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H+I+ F+   + ERD A+FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAIHSFLVKDEKERDVAHFLIFPFLLWRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFYI   ++P + S++  WR DGV++TIL+H GPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYIAYFILPGA-SHMPLWRVDGVVITILLHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTMIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
             + I +F GYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPSY +LHHTQFRTN
Sbjct: 199 GTSCIVAFFGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSYFTLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YDY+YGT+DRSSD +YEKSL R     EES    DVVHLTHLTTP+SIYH+R+
Sbjct: 259 YSLFMPFYDYMYGTMDRSSDVLYEKSLTRP----EESP---DVVHLTHLTTPDSIYHIRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFA +ASKP+     +S+WYL+L+WP T+S  +L+ WI  RTFV E N  +KLKLQTWV+
Sbjct: 312 GFAFVASKPY-----ISKWYLRLMWPLTSSYMMLI-WICSRTFVLERNHFNKLKLQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y +QY L W+ E INSLIEEAIL A+ +GVKV+SLGLLNQGEELN  G++Y+   P K
Sbjct: 366 PKYRIQYFLKWQNEPINSLIEEAILHAEERGVKVLSLGLLNQGEELNLYGKLYIHLNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+V T  +++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTAIALCQKGIQVTTFREEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           ++K+K+++  + +  L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 HKKIKMKLNTKLRDKLALSKNYAH---KIWLVGDGLTEEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  NM SCENWL RR MSAWR+AGI+HALEGW+++ECG T+ D
Sbjct: 540 MRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHTIFD 599

Query: 620 IHQVWHASLRHGFRPL 635
           I ++W AS +HGFRPL
Sbjct: 600 IEKIWEASFQHGFRPL 615

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504497|ref|XP_003521032.1| PREDICTED: protein WAX2-like [Glycine max]

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/614 (65%), Positives = 488/614 (79%), Gaps = 20/614 (3%)

Query: 22  VVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVD 81
           V+L PW  HS Y F+ S   ERD  YFLIFP +++RMLHDQ+WI+LSR+RTAK  NRIVD
Sbjct: 22  VILTPWIAHSTYSFLVSEPKERDLTYFLIFPLMMVRMLHDQVWITLSRHRTAKGKNRIVD 81

Query: 82  KAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEF 141
           K IEF+QVDRE NWDDQI+FNG+IFYI  ML+P S S++  WR+DGV++T L+H GPVEF
Sbjct: 82  KGIEFEQVDRESNWDDQILFNGIIFYIGYMLVPES-SHMPLWRTDGVLITALLHAGPVEF 140

Query: 142 LYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKN 201
           LYYW HRALHHH+LYSRYHSHHHSS+VTEPITSVIHPFAEHI YF+LFAIPL TT+V + 
Sbjct: 141 LYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFVLFAIPLYTTVVTRT 200

Query: 202 ASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYS 261
           ASIAS+ GY+ Y+DFMNN+GHCNFE IP  +F+ FP LK+LMYTPS+HSLHHTQFRTNYS
Sbjct: 201 ASIASYAGYLAYIDFMNNLGHCNFECIPKAIFSAFPFLKYLMYTPSFHSLHHTQFRTNYS 260

Query: 262 LFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGF 321
           LFMPIYDYIYGT+D+S+D+ YE +LKR     EES    DVVHLTHLTTPESIYHLR+GF
Sbjct: 261 LFMPIYDYIYGTMDKSTDTTYEIALKR-----EESL--ADVVHLTHLTTPESIYHLRLGF 313

Query: 322 ASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPR 381
           ASLAS+P       S WYL L+WPFT   SVLV+W YG+TFV E N    L LQ+WV+PR
Sbjct: 314 ASLASRPQS-----STWYLYLMWPFTL-WSVLVTWFYGQTFVMERNAFKMLNLQSWVIPR 367

Query: 382 YIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK 441
           + VQY   W+ E +N LIEEAIL+A+   VKV+SLGL NQG+ LN+ GE+Y+++ P +LK
Sbjct: 368 FHVQYLFKWQSETLNKLIEEAILQAELSKVKVLSLGLSNQGDLLNKYGELYIKKYP-ELK 426

Query: 442 IKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE 501
           IK+VDGSSL  A+V+NS+PK  + VLL G    NKV+ A+ S+LC+ G KV T+ KD+Y+
Sbjct: 427 IKIVDGSSLVVAIVLNSIPKEASQVLLCG--KPNKVSYAIVSALCERGTKVTTMYKDEYD 484

Query: 502 KLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLR 561
           KL+LRIP E++ NLV   SY A   KIWL+GD     +Q +APKG++FIP +Q PP+KLR
Sbjct: 485 KLQLRIPNESKDNLVFPGSYPA---KIWLLGDQCNEVDQRKAPKGSLFIPISQFPPKKLR 541

Query: 562 KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIH 621
           KDCFYHSTPAMI PPSL N+ SCENWL RRVMSAWR+AGI+HALEGW++NECG  M  + 
Sbjct: 542 KDCFYHSTPAMIAPPSLVNVDSCENWLPRRVMSAWRVAGILHALEGWNVNECGNVMFSVE 601

Query: 622 QVWHASLRHGFRPL 635
           ++  ASL+HGFRPL
Sbjct: 602 KIRQASLQHGFRPL 615

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734709|emb|CBI16760.3| unnamed protein product [Vitis vinifera]

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/607 (65%), Positives = 494/607 (81%), Gaps = 20/607 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPWA+H+I+ F+   + ERD A+FLIFPFLL RMLH+Q+WISLSR+RTAK NNRI
Sbjct: 20  KYVVLAPWAIHAIHSFLVKDEKERDVAHFLIFPFLLSRMLHNQLWISLSRHRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG+IFYI   ++P + S++  WR+DGV++TIL+H GPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQIIFNGIIFYIAYFILPGA-SHMPLWRADGVVITILLHTGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLF+IPL+T +  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIGYFLLFSIPLLTMIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
           + +S+ +F GYI Y+DFMNNMGHCNFE +P WLF++FP LK+LMYTPS+HSLHHTQFRTN
Sbjct: 199 RTSSVVAFFGYISYIDFMNNMGHCNFELVPKWLFSIFPFLKYLMYTPSFHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMP YD++YGT+D+SSD +YEKSL R     EES    DVVHLTHLTTP SIYH+R+
Sbjct: 259 YSLFMPFYDFMYGTMDKSSDVLYEKSLTRP----EESP---DVVHLTHLTTPNSIYHIRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFAS+ASKP+     +S+WYL+L+WP T+S  +L+ WI  RTFV E N  +KLK QTWV+
Sbjct: 312 GFASVASKPY-----ISKWYLRLMWPLTSSYMMLI-WICSRTFVLERNHFNKLKSQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y VQY L W+ E INSLIEEAIL A+ +GVKV+SLGLLNQGEELN  G++Y+   P K
Sbjct: 366 PKYRVQYFLKWQNEPINSLIEEAILHAEERGVKVLSLGLLNQGEELNLYGKLYIHLNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA   A +LCQ GI+V T C+++
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGKLS--KVAYFTAIALCQKGIQVTTFCEEE 482

Query: 500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRK 559
           ++K+K+++  +    L LS +YA    KIWLVGD LT +EQ +APKGT+FIP++Q PP++
Sbjct: 483 HKKIKMKLNTKLGDKLALSKNYAH---KIWLVGDGLTEEEQLKAPKGTLFIPFSQFPPKR 539

Query: 560 LRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD 619
           +RKDCFYH+TPAM+ P S  NM SCENWL RR MSAWR+AGI+HALEGW+++ECG T+ D
Sbjct: 540 MRKDCFYHTTPAMMSPTSFENMDSCENWLPRRAMSAWRVAGILHALEGWNVHECGHTIFD 599

Query: 620 IHQVWHA 626
           I ++W A
Sbjct: 600 IEKIWEA 606

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454042|ref|XP_002262785.1| PREDICTED: protein WAX2 [Vitis vinifera] gi|297744850|emb|CBI38118.3| unnamed protein product [Vitis vinifera]

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/617 (63%), Positives = 490/617 (79%), Gaps = 21/617 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++V+LAPW +HSIY  I     ERD  Y L FPFLL R LH+QIWISL+RYRTAK NNRI
Sbjct: 20  KYVILAPWVVHSIYTLIIKDGKERDPVYVLFFPFLLWRALHNQIWISLARYRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK+IEF+QVDRE NWDDQI+ NG++FY+V M++P   +++  WR+DGV+LTIL+HMGPV
Sbjct: 80  VDKSIEFEQVDRESNWDDQILLNGILFYVVYMILP-GVAHMPLWRTDGVLLTILLHMGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEH+ YFLLF IPL+    +
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHLAYFLLFLIPLLAGFFM 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
           + +S+A+  GYI Y+DFMNNMGHCNFE IP  LF++FPPLK+LMYTPSYHSLHHTQFRTN
Sbjct: 199 RKSSMAAVFGYISYIDFMNNMGHCNFELIPKMLFSIFPPLKYLMYTPSYHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMPIYDYIYGT+D+SSD++YEKSL R  +          VVHLTHL TP+SIYHLR+
Sbjct: 259 YSLFMPIYDYIYGTMDKSSDALYEKSLIRPEQLPH-------VVHLTHLVTPQSIYHLRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFASLASKP+ Y     +WY+  +WP T  CS++++W YGRTF+ E N  +K+ +QTWVV
Sbjct: 312 GFASLASKPYTY-----KWYVWAMWPVTC-CSIMLTWTYGRTFILERNQFNKVNVQTWVV 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P++ +QY L    E+I+SLIEEAIL+AD +G+KV+SLGLLNQG+E N  GE+Y+   P K
Sbjct: 366 PKFKIQYLLKLGNESIDSLIEEAILKADKRGIKVLSLGLLNQGDEFNSYGELYIHNNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG +T  KVA  +AS+LCQM I+VAT  KD+
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLT--KVAYFIASALCQMDIQVATSRKDE 482

Query: 500 YEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR 558
           YE+L  ++  VE +  L+LS S+     KIW+VGD LT +EQ +A  GT+FIP++Q PP+
Sbjct: 483 YEQLNTKLKNVECESKLLLSKSFTE---KIWVVGDGLTKEEQMKASTGTLFIPFSQFPPK 539

Query: 559 KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMC 618
           +LRKDC YH+TPAM+ P S  N+ SCENWL RR MSA R+AG+IHALEGW+++ECG TM 
Sbjct: 540 RLRKDCLYHTTPAMMPPKSFQNIDSCENWLPRRAMSASRVAGVIHALEGWNVHECGNTMF 599

Query: 619 DIHQVWHASLRHGFRPL 635
           ++ ++W ASL+HGFRPL
Sbjct: 600 NVEKIWEASLQHGFRPL 616

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454040|ref|XP_002262647.1| PREDICTED: protein WAX2 [Vitis vinifera] gi|297744851|emb|CBI38119.3| unnamed protein product [Vitis vinifera]

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/617 (63%), Positives = 490/617 (79%), Gaps = 21/617 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++V+LAPW +HSIY  I     ERD  Y L FPFLL R LH+QIWISL+RYRTAK NNRI
Sbjct: 20  KYVILAPWVVHSIYTLIIKDGKERDPVYVLFFPFLLWRTLHNQIWISLARYRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK+IEF+QVDRE NWDDQI+ NG++FY+  M++P + +++  WR+DGV+LTIL+HMGPV
Sbjct: 80  VDKSIEFEQVDRESNWDDQILLNGILFYVGYMILPGA-AHMPLWRTDGVLLTILLHMGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEH+ YFLLF+IPL+  + +
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHLAYFLLFSIPLLAGIFM 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
           +  SIA+  GYI Y+DFMNNMGHCNFE IP  LF++FPPLK+LMYTPSYHSLHHT+FRTN
Sbjct: 199 RKNSIAALFGYISYIDFMNNMGHCNFELIPKMLFSIFPPLKYLMYTPSYHSLHHTRFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMPIYDYIYGT+D+SSD++YEKSL R  E        + VVHLTHL TP+SIYHLR+
Sbjct: 259 YSLFMPIYDYIYGTMDKSSDALYEKSLIRPEEL-------LHVVHLTHLVTPQSIYHLRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFASLASKP+ Y     +WY+  +WP T   S++++W YGRTF+ E N  +K+ +QTWVV
Sbjct: 312 GFASLASKPYTY-----RWYVWAMWPVTCG-SIMLTWTYGRTFILERNQFNKVNVQTWVV 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P++ +QY L    E+I+SLIEEAIL+AD +G+KV+SL LLNQG+ELN  GE+Y+ R P K
Sbjct: 366 PKFKIQYLLKLGNESIDSLIEEAILKADKRGIKVLSLSLLNQGDELNSYGELYIHRNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG +T  KVA  +AS+LCQM I+VAT   D+
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLT--KVAYFIASALCQMDIQVATSHGDE 482

Query: 500 YEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR 558
           YE+L  ++  VE +  L+LS S+     KIWLVGD LT +EQ +A KGT+FIP++Q PP+
Sbjct: 483 YEQLNTKLKNVECESKLLLSKSFTE---KIWLVGDGLTKEEQIKASKGTLFIPFSQFPPK 539

Query: 559 KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMC 618
           +LRKDC Y +TPAM+ P S  N+ SCENWL RR MSA R+AG+IHALEGW+++ECG TM 
Sbjct: 540 RLRKDCLYLTTPAMMSPKSFQNIDSCENWLPRRAMSASRVAGVIHALEGWNVHECGNTMF 599

Query: 619 DIHQVWHASLRHGFRPL 635
           +I ++W ASL HGFRPL
Sbjct: 600 NIEKIWEASLHHGFRPL 616

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	639
TAIR|locus:2204813	627	AT1G02190 "AT1G02190" [Arabido	0.938	0.956	0.521	5.4e-173
UNIPROTKB|Q7XDI3	621	Os10g0471100 "CER1 protein, pu	0.935	0.962	0.502	3.5e-162
UNIPROTKB|Q109K1	595	LOC_Os10g33250 "CER1 protein,	0.694	0.746	0.517	1.4e-157
TAIR|locus:2040666	613	AT2G37700 "AT2G37700" [Arabido	0.746	0.778	0.503	1.5e-124
TAIR|locus:2174368	632	CER3 "ECERIFERUM 3" [Arabidops	0.938	0.949	0.326	2.4e-85
UNIPROTKB|Q6ETL8	628	P0544B02.10 "Os02g0178800 prot	0.877	0.893	0.316	4.1e-72

TAIR|locus:2204813 AT1G02190 "AT1G02190" [Arabidopsis thaliana (taxid:3702)]

 Score = 1681 (596.8 bits), Expect = 5.4e-173, P = 5.4e-173
 Identities = 325/623 (52%), Positives = 428/623 (68%)

Query:    20 QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
             +++++AP  M S++ ++ +   E+D +  +I   +L R++H QIWIS+SR RTAK  N+I
Sbjct:    20 KYLLVAPLVMASMHSYVTAVDEEKDLSRLMIVVLMLWRIVHSQIWISVSRQRTAKGTNKI 79

Query:    80 VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
             VDK IEF+QVDRER WDDQ++FN L+ Y+  + +P + S+L  WR DG IL  L+H GPV
Sbjct:    80 VDKPIEFEQVDRERTWDDQVIFNTLLMYLANIKLPGA-SHLPPWRLDGAILMALLHAGPV 138

Query:   140 EFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
             EFLYYWF                    +VTEPITSV+HPFAEHI Y LLFAIP+VT  + 
Sbjct:   139 EFLYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAEHIAYTLLFAIPMVTASLC 198

Query:   200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
                SI S +GYI Y+DFMNNMGHCNFE  P  LF +FPPLKFL YTPS+HSLHHTQFRTN
Sbjct:   199 GILSIVSIMGYITYIDFMNNMGHCNFELFPKRLFHLFPPLKFLCYTPSFHSLHHTQFRTN 258

Query:   260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDVDVVHLTHLTTPESIYHLRI 319
             YSLFMPIYD+IYGT D  +DS+YE+SL+          +  DV+HLTHLTT  SIY +R+
Sbjct:   259 YSLFMPIYDFIYGTTDNLTDSLYERSLE-------IEEESPDVIHLTHLTTHNSIYQMRL 311

Query:   320 GFASLASKPHRYTYTLSQWYLQ-LLWPFTASCS-VLVSWIYGRTFVSESNTLDKLKLQTW 377
             GF SL+S P    ++   WYL   +WPFT  CS  L S I  RTFV E N L  L + + 
Sbjct:   312 GFPSLSSCP---LWSRPPWYLTCFMWPFTLLCSFALTSAIPLRTFVFERNRLRDLTVHSH 368

Query:   378 VVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQP 437
             ++P++   Y      E+IN++IEEAILEAD KGVKV+SLGL+N  EELN +GE+Y+++ P
Sbjct:   369 LLPKFSFHYKSQRHHESINTIIEEAILEADEKGVKVMSLGLMNNREELNGSGEMYVQKYP 428

Query:   438 NKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXXXXSSLCQMGIKVATICK 497
              KLKI++VDGSS+AA VV+N++PK    ++ RG             +LCQ G+KV  + +
Sbjct:   429 -KLKIRLVDGSSMAATVVINNIPKEATEIVFRGNLTKVASAVVF--ALCQKGVKVVVLRE 485

Query:   498 DDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPP 557
             +++ KL   I      NLVLSTS + +  K+WLVGD +  +EQ +A +GT+F+P++  PP
Sbjct:   486 EEHSKL---IKSGVDKNLVLSTSNSYYSPKVWLVGDGIENEEQMKAKEGTLFVPFSHFPP 542

Query:   558 RKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTM 617
              KLRKDCFY STPAM +P S  N+ SCENWLGRRVMSAW+I GI+HALEGW+ ++CG T 
Sbjct:   543 NKLRKDCFYQSTPAMRVPKSAQNIDSCENWLGRRVMSAWKIGGIVHALEGWEEHDCGNT- 601

Query:   618 CDI---HQVWHASLRHGFRPLFP 637
             C++   H +W A+LRH F+PL P
Sbjct:   602 CNVLRLHAIWEAALRHDFQPLPP 624

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q7XDI3 Os10g0471100 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
 Identities = 310/617 (50%), Positives = 404/617 (65%)

Query:    20 QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
             ++V+LAPW  H  Y        E D  Y  I P LLLRMLH+Q WI++SR + A+   +I
Sbjct:    20 KYVLLAPWVAHGWYEVATKGWREVDLGYIAILPSLLLRMLHNQAWITISRLQNARGRRQI 79

Query:    80 VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
             V + IEFDQVDRERNWDDQI+ +G++ Y+  + +P    +L  WR+DG  L  L+H GPV
Sbjct:    80 VRRGIEFDQVDRERNWDDQIILSGILLYLGALYVPGG-QHLPLWRTDGAGLIALLHAGPV 138

Query:   140 EFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
             EFLYYWF                    +VTEPITSVIHPFAE + Y LLF+IPL+   + 
Sbjct:   139 EFLYYWFHRALHHHFLYTHYHSHHHSSIVTEPITSVIHPFAELVAYELLFSIPLIACALT 198

Query:   200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
               ASI +F  Y+IY+DFMNNMGHCNFE +P WLFT FPPLK+LMYTPS+HSLHHTQFRTN
Sbjct:   199 GTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFTWFPPLKYLMYTPSFHSLHHTQFRTN 258

Query:   260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDVDVVHLTHLTTPESIYHLRI 319
             YSLFMP YDYIY T+D+SSD++YE SLK +        + VDVVHLTHLTT  SIYH+R 
Sbjct:   259 YSLFMPFYDYIYNTMDKSSDTLYENSLKNN-----EEEEAVDVVHLTHLTTLHSIYHMRP 313

Query:   320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
             GFA  AS+P+     +S+WY++++WP +   S++++W YG +F  E N + K+++Q+W +
Sbjct:   314 GFAEFASRPY-----VSRWYMRMMWPLSW-LSMVLTWTYGSSFTVERNVMKKIRMQSWAI 367

Query:   380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
             PRY   Y L W +EAIN LIE+A+ EAD  G KV+SLGLLNQ   LN++GE YL + P K
Sbjct:   368 PRYSFHYGLDWEKEAINDLIEKAVCEADKNGAKVVSLGLLNQAHTLNKSGEQYLLKYP-K 426

Query:   440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXXXXSSLCQMGIKVATICKDD 499
             L  ++VDG+SLAAAVVVNS+P+ T  V+L G             +LC+  IKV    K D
Sbjct:   427 LGARIVDGTSLAAAVVVNSIPQGTDQVILAGNVSKVARAVA--QALCKKNIKVTMTNKQD 484

Query:   500 YEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTI-FIPYTQIPPR 558
             Y  LK  IP     NL  S +  A K  +   G D   + +A+     I +  +   P  
Sbjct:   485 YHLLKPEIPETVADNLSFSKTGTA-KVWLIGDGLDSAEQFRAQKGTLFIPYSQFP--PKM 541

Query:   559 KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMC 618
               +  C Y +TPAM +P +L N+HSCENWL RRVMSAWRIAGI+HALEGW+ +ECG  + 
Sbjct:   542 VRKDSCSYSTTPAMAVPKTLQNVHSCENWLPRRVMSAWRIAGILHALEGWNEHECGDKVL 601

Query:   619 DIHQVWHASLRHGFRPL 635
             D+ +VW A++ HGF P+
Sbjct:   602 DMDKVWSAAIMHGFCPV 618

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

UNIPROTKB|Q109K1 LOC_Os10g33250 "CER1 protein, putative, expressed" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1212 (431.7 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
 Identities = 239/462 (51%), Positives = 312/462 (67%)

Query:   175 VIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFT 234
             VIHPFAE + Y LLF+IPL+   +   ASI +F  Y+IY+DFMNNMGHCNFE +P WLFT
Sbjct:   148 VIHPFAELVAYELLFSIPLIACALTGTASIIAFEMYLIYIDFMNNMGHCNFELVPSWLFT 207

Query:   235 VFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXX 294
              FPPLK+LMYTPS+HSLHHTQFRTNYSLFMP YDYIY T+D+SSD++YE SLK +     
Sbjct:   208 WFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDTLYENSLKNN----- 262

Query:   295 XSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLV 354
                + VDVVHLTHLTT  SIYH+R GFA  AS+P+     +S+WY++++WP +   S+++
Sbjct:   263 EEEEAVDVVHLTHLTTLHSIYHMRPGFAEFASRPY-----VSRWYMRMMWPLSW-LSMVL 316

Query:   355 SWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVI 414
             +W YG +F  E N + K+++Q+W +PRY   Y L W +EAIN LIE+A+ EAD  G KV+
Sbjct:   317 TWTYGSSFTVERNVMKKIRMQSWAIPRYSFHYGLDWEKEAINDLIEKAVCEADKNGAKVV 376

Query:   415 SLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXX 474
             SLGLLNQ   LN++GE YL + P KL  ++VDG+SLAAAVVVNS+P+ T  V+L G    
Sbjct:   377 SLGLLNQAHTLNKSGEQYLLKYP-KLGARIVDGTSLAAAVVVNSIPQGTDQVILAGNVSK 435

Query:   475 XXXXXXXXSSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDD 534
                      +LC+  IKV    K DY  LK  IP     NL  S +  A K  +   G D
Sbjct:   436 VARAVA--QALCKKNIKVTMTNKQDYHLLKPEIPETVADNLSFSKTGTA-KVWLIGDGLD 492

Query:   535 LTGKEQARAPKGTI-FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVM 593
                + +A+     I +  +   P    +  C Y +TPAM +P +L N+HSCENWL RRVM
Sbjct:   493 SAEQFRAQKGTLFIPYSQFP--PKMVRKDSCSYSTTPAMAVPKTLQNVHSCENWLPRRVM 550

Query:   594 SAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRPL 635
             SAWRIAGI+HALEGW+ +ECG  + D+ +VW A++ HGF P+
Sbjct:   551 SAWRIAGILHALEGWNEHECGDKVLDMDKVWSAAIMHGFCPV 592

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0010143 "cutin biosynthetic process" evidence=IDA

GO:0043668 "exine" evidence=IMP

GO:0048653 "anther development" evidence=IMP

TAIR|locus:2040666 AT2G37700 "AT2G37700" [Arabidopsis thaliana (taxid:3702)]

 Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
 Identities = 250/497 (50%), Positives = 326/497 (65%)

Query:    20 QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
             ++++LAP    SIY +     + RD+   LI    + R++H QIWISLSRY+TAK   RI
Sbjct:    20 KYLLLAPLVFDSIYSYA----TIRDHEKLLIVAVTVWRIVHSQIWISLSRYQTAKGTKRI 75

Query:    80 VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
             ++K+IEFDQVDRER WDDQI+FN LI Y+ ++ +  + S + FWR+DGVIL  L+H GPV
Sbjct:    76 LNKSIEFDQVDRERTWDDQIIFNTLIVYLTKVYVSGT-STIPFWRTDGVILVALLHAGPV 134

Query:   140 EFLYYWFXXXXXXXXXXXXXXXXXXXXVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
             EF+YYWF                    +VTEPITSV+HPFAEHI Y L+  +PL+TT + 
Sbjct:   135 EFIYYWFHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAEHIGYTLILGLPLITTFMC 194

Query:   200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
                S+ S   Y+ Y+DFMNNMGHCNFE IP +LF++ PPLKFL YTPS+HSLHHTQFRTN
Sbjct:   195 GTVSVVSIALYLTYIDFMNNMGHCNFELIPKFLFSLLPPLKFLCYTPSFHSLHHTQFRTN 254

Query:   260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDVDVVHLTHLTTPESIYHLRI 319
             YSLFMP+YDYIYGT D  SDS+YE SL++         +  D +HLTHLT+ +SIYHLR+
Sbjct:   255 YSLFMPMYDYIYGTTDECSDSLYETSLEKE-------EEKPDAIHLTHLTSLDSIYHLRL 307

Query:   320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
             GFASL+S P       S+ YL L+ PF    S ++     +TFV E N    L L + ++
Sbjct:   308 GFASLSSHP-----LSSRCYLFLMKPFALILSFILRSFSFQTFVVERNRFRDLTLHSHLL 362

Query:   380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
             P++   Y    ++E IN +IE AILEAD KGVKV+SLGLLNQGEELN  GE+Y+ R P K
Sbjct:   363 PKFSSHYMSHQQKECINKMIEAAILEADKKGVKVMSLGLLNQGEELNGYGEMYVRRHP-K 421

Query:   440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXXXXSSLCQMGIKVATICKDD 499
             LKI++VDG SLAA VV++S+P  T  VL RG             SLCQ  IKV  + K++
Sbjct:   422 LKIRIVDGGSLAAEVVLHSIPVGTKEVLFRGQITKVARAIVF--SLCQNAIKVMVLRKEE 479

Query:   500 YEKLKLRIPVEAQHNLV 516
             +  L   +  + + NL+
Sbjct:   480 HSMLAEFLDDKCKENLI 496

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2174368 CER3 "ECERIFERUM 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 203/621 (32%), Positives = 317/621 (51%)

Query:    19 VQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNR 78
             +++++ AP A   +Y ++      +      I     L+ L  ++W   +      R  R
Sbjct:    16 LKYLLYAPLAAQVVYSWVYEEDISKVLWCIHILIICGLKALVHELWSVFNNMLFVTRTLR 75

Query:    79 IVDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPP---SYSNLRFWRSDGVILTILVH 135
             I  K I+F Q+D E +WD+ I+   +I  ++  + PP     ++L  W + G+I  I++H
Sbjct:    76 INPKGIDFKQIDHEWHWDNYIILQAIIVSLICYMSPPLMMMINSLPLWNTKGLIALIVLH 135

Query:   136 MGPVEFLYYWFXXXXXXXXXXXXXXXXXX-XXVVTEPITSVIHPFAEHIVYFLLFAIPLV 194
             +   E LYY+                       V  P+T+      E+I+  ++  +PL+
Sbjct:   136 VTFSEPLYYFLHRSFHRNNYFFTHYHSFHHSSPVPHPMTAGNATLLENIILCVVAGVPLI 195

Query:   195 TTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254
                +    S+++  GY +  DFM  +GHCN E     LF + P L++L+YTP+YHSLHH 
Sbjct:   196 GCCLFGVGSLSAIYGYAVMFDFMRCLGHCNVEIFSHKLFEILPVLRYLIYTPTYHSLHHQ 255

Query:   255 QFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGXXXXXSADDVDVVHLTHLTTPESI 314
             +  TN+ LFMP++D +  T + +S  + +K    +G          + V L H     S 
Sbjct:   256 EMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSAGERKRVP----EFVFLAHGVDVMSA 311

Query:   315 YHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKL 374
              H    F S AS P  YT   ++ +L  +WPFT  C +L  W + +TF+    TL     
Sbjct:   312 MHAPFVFRSFASMP--YT---TRIFLLPMWPFTF-CVMLGMWAWSKTFLFSFYTLRNNLC 365

Query:   375 QTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLE 434
             QTW VPR+  QY LP+  + IN  IE AIL AD  GVKVISL  LN+ E LN  G +++ 
Sbjct:   366 QTWGVPRFGFQYFLPFATKGINDQIEAAILRADKIGVKVISLAALNKNEALNGGGTLFVN 425

Query:   435 RQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGXXXXXXXXXXXXSSLCQMGIKVA- 493
             + P+ L+++VV G++L AAV++  +PK    V L G              LC+ G++V  
Sbjct:   426 KHPD-LRVRVVHGNTLTAAVILYEIPKDVNEVFLTGATSKLGRAIALY--LCRRGVRVLM 482

Query:   494 -TICKDDYEKLKLRIPVEAQHNLVLSTSY-AAHKTKIWLVGDDLTGKEQARAPKGTIFIP 551
              T+  + ++K++   PVE Q+NLV  T Y AA   K W+VG  LT +EQ+ AP GT F  
Sbjct:   483 LTLSMERFQKIQKEAPVEFQNNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQ 542

Query:   552 YTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN 611
             +   P  K R++C Y    AM +P  +  + +CE  + R V+ A    G++H LEGW  +
Sbjct:   543 FVVPPILKFRRNCTYGDLAAMKLPKDVEGLGTCEYTMERGVVHACHAGGVVHMLEGWKHH 602

Query:   612 ECGQTMCD-IHQVWHASLRHG 631
             E G    D I  VW A++++G
Sbjct:   603 EVGAIDVDRIDLVWEAAMKYG 623

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=ISS

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0042335 "cuticle development" evidence=RCA;IMP

GO:0048235 "pollen sperm cell differentiation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006723 "cuticle hydrocarbon biosynthetic process" evidence=IMP

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0043447 "alkane biosynthetic process" evidence=IDA

UNIPROTKB|Q6ETL8 P0544B02.10 "Os02g0178800 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 187/590 (31%), Positives = 285/590 (48%)

Query:    57 RMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDRERNWDDQIVFNGLIFYIV------- 109
             R L  Q W S        R  R+V  +++F QVD E +WD+ ++   LI   +       
Sbjct:    55 RGLTYQFWFSYGNMLFFTRRRRVVPDSVDFRQVDAEWDWDNFLLLQTLIGATLVGSPAVA 114

Query:   110 -RMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFXXXXXXXXXXXXXXXXXXXXVV 168
              + L+ PS      W   G  + +L+H+   E L+YW                      V
Sbjct:   115 RQQLLLPSLKQA--WDPRGWAIALLLHVLVAEPLFYWAHRALHRAPLFSRYHAAHHHASV 172

Query:   169 TEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFI 228
             T P+T+      E ++  ++  +PL    ++   S+    G+++  DF+ +MG+ N E I
Sbjct:   173 TTPLTAGFGTPLESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVI 232

Query:   229 PMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKR 288
                +F   P L++L+YTP+Y SLHH +  +N+ LFMPI+D + GT++  S   +E  L++
Sbjct:   233 SPRVFQAVPLLRYLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKS---WE--LQK 287

Query:   289 SGXXXXXSADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRYTYTLSQWYLQLLWPFTA 348
                    +    D V L H+    +  H+     S +S P    + L  +     WP  A
Sbjct:   288 E-VYLGKNDQAPDFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPF-----WP-VA 340

Query:   349 SCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADA 408
                +L+ W   +TF+  S  L     Q W VPRY  QY +P  ++ IN  IE AIL AD 
Sbjct:   341 FGFMLLMWCCSKTFLVSSYRLRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADR 400

Query:   409 KGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLL 468
              GVKV+SL  LN+ E LN  G +++ + P +L+++VV G++L AAV++N +P     V L
Sbjct:   401 MGVKVLSLAALNKNEALNGGGTLFVNKHP-ELRVRVVHGNTLTAAVILNEIPSNVKDVFL 459

Query:   469 RGXXXXXXXXXXXXSSLCQMGIKVA--TICKDDYEKLKLRIPVEAQHNLVLSTSYA-AHK 525
              G              LC+  I+V   T+  + + K++   P E Q  LV  T Y  A  
Sbjct:   460 TGATSKLGRAIALY--LCRKKIRVLMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQN 517

Query:   526 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCE 585
              K WLVG  L+ +EQ  AP GT F  +   P    R+DC Y    AM +P  +  +  CE
Sbjct:   518 CKTWLVGKWLSPREQRWAPAGTHFHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGYCE 577

Query:   586 NWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCD-IHQVWHASLRHGFRP 634
               + R V+ A    G++H LEGW+ +E G    D I  VW A+L+HG  P
Sbjct:   578 YTMERGVVHACHAGGVVHFLEGWEHHEVGAIDVDRIDVVWKAALKHGLTP 627


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      639       602   0.00086  120 3  11 22  0.45    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  635 (67 KB)
  Total size of DFA:  384 KB (2186 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  47.84u 0.13s 47.97t   Elapsed:  00:00:02
  Total cpu time:  47.84u 0.13s 47.97t   Elapsed:  00:00:02
  Start:  Thu May  9 18:18:48 2013   End:  Thu May  9 18:18:50 2013

GO:0010025 "wax biosynthetic process" evidence=IMP

GO:0043447 "alkane biosynthetic process" evidence=IMP

GO:0046184 "aldehyde biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
F4HVY0	CER1_ARATH	No assigned EC number	0.6252	0.9389	0.96	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00010554001 SubName- Full=Chromosome undetermined scaffold_268, whole genome shotgun sequence; (618 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	639
PLN02869	620	PLN02869, PLN02869, fatty aldehyde decarbonylase	0.0
pfam12076	164	pfam12076, Wax2_C, WAX2 C-terminal domain	8e-85
pfam04116	114	pfam04116, FA_hydroxylase, Fatty acid hydroxylase	9e-18
COG3000	271	COG3000, ERG3, Sterol desaturase [Lipid metabolism	1e-16

>gnl|CDD|166510 PLN02869, PLN02869, fatty aldehyde decarbonylase

 Score =  999 bits (2585), Expect = 0.0
 Identities = 429/617 (69%), Positives = 515/617 (83%), Gaps = 21/617 (3%)

Query: 20  QHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRI 79
           ++VVLAPW +HSIY F+   + ERD +YFLIFPFLL RMLH+Q+WISLSRYRTAK NNRI
Sbjct: 20  KYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRI 79

Query: 80  VDKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPV 139
           VDK IEF+QVDRERNWDDQI+FNG++FY+  M++P + S++  WR+DGV++TIL+HMGPV
Sbjct: 80  VDKGIEFEQVDRERNWDDQILFNGILFYVGYMILPGA-SHMPLWRTDGVLITILLHMGPV 138

Query: 140 EFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVL 199
           EFLYYW HRALHHHYLYSRYHSHHHSS+VTEPITSVIHPFAEHI YFLLFAIPL+TT+  
Sbjct: 139 EFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFT 198

Query: 200 KNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTN 259
             ASIA+F GYI Y+DFMNNMGHCNFE IP WLF++FPPLK+LMYTPSYHSLHHTQFRTN
Sbjct: 199 GTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSLHHTQFRTN 258

Query: 260 YSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRI 319
           YSLFMPIYDYIYGT+D+SSD++YEKSLKR     EE     DVVHLTHLTTP+SIYHLR+
Sbjct: 259 YSLFMPIYDYIYGTMDKSSDTLYEKSLKR----PEEI---PDVVHLTHLTTPDSIYHLRL 311

Query: 320 GFASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVV 379
           GFASLASKP+       +WYL+L+WP T S S++++WIYGRTFV E N  +KL LQTWV+
Sbjct: 312 GFASLASKPYIS-----KWYLRLMWPVT-SWSMMLTWIYGRTFVLERNRFNKLNLQTWVI 365

Query: 380 PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNK 439
           P+Y +QY L W+ E+INSLIEEAILEAD +GVKV+SLGLLNQGEELNR GE+Y+ R P K
Sbjct: 366 PKYKIQYLLKWQNESINSLIEEAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNP-K 424

Query: 440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499
           LKIKVVDGSSLA AVV+NS+PK T  VL RG ++  KVA  +AS+LCQ GI+VAT  +D+
Sbjct: 425 LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQRGIQVATFREDE 482

Query: 500 YEKLKLRIP-VEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR 558
           YEKL  ++P  E    L+LS +Y+    KIWLVGD LT +EQ +A KGT+FIP++Q PP+
Sbjct: 483 YEKLNKKLPNTECGSKLLLSKNYS---EKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPK 539

Query: 559 KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMC 618
           +LRKDCFYH+TPAM+ P S  N+ SCENWL RR MSAWR+AGI+HALEGW+++ECG TM 
Sbjct: 540 RLRKDCFYHTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECGYTMF 599

Query: 619 DIHQVWHASLRHGFRPL 635
           DI ++W ASL+HGFRPL
Sbjct: 600 DIEKIWEASLQHGFRPL 616

Length = 620

>gnl|CDD|192933 pfam12076, Wax2_C, WAX2 C-terminal domain

 Score =  262 bits (672), Expect = 8e-85
 Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 5/169 (2%)

Query: 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK 525
           VLLRG  +  KVA A+A +LC+ G+KV  + K++YEKLK   P E Q NLVLSTSY A  
Sbjct: 1   VLLRGNTS--KVARAIALALCKKGVKVVMLSKEEYEKLKPEAPPEVQDNLVLSTSYTA-- 56

Query: 526 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCE 585
            K+WLVGD L+ +EQ +APKGT+FIP++Q PP+KLRKDCFYH+TPAM +P S  N+ SCE
Sbjct: 57  -KVWLVGDGLSPEEQMKAPKGTLFIPFSQFPPKKLRKDCFYHTTPAMKLPKSFQNLDSCE 115

Query: 586 NWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRHGFRP 634
           NWL RRVMSAWR  GI+HALEGW+ +ECG T+  I +VW A+LRHGFRP
Sbjct: 116 NWLPRRVMSAWRAGGIVHALEGWNEHECGDTVLGIDKVWEAALRHGFRP 164

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with pfam04116. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases. Length = 164

>gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily

 Score = 79.1 bits (195), Expect = 9e-18
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 132 ILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITS-VIHPFAEHIVYFLLFA 190
            L+ +   +F+ YW HR LH      R+H  HHS     P+T+   HP    +   LL  
Sbjct: 1   FLLGLLLFDFVEYWVHRLLHRVPFLWRFHKVHHSDESPNPLTAFRFHP----LEALLLAL 56

Query: 191 IPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHS 250
           IPL+  ++L    +   +  ++    +    H                L +L  TP YH 
Sbjct: 57  IPLLLLLLLFGLHLLVILLGLLLGTLLYLFIHSGLHLWLPP------LLSYLFVTPRYHR 110

Query: 251 LHHT 254
           LHH+
Sbjct: 111 LHHS 114

This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins. Length = 114

>gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism]

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 139 VEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSV-IHPFAEHIVYFLLFAIPLVTTM 197
           ++  YYW HR LH   L   +H  HHSS V +P+T++  HP  E ++   L  +PL+   
Sbjct: 106 LDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPL-EILLLAFLGLLPLLLLG 164

Query: 198 VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFR 257
                S  +     I++ F   + H N +              ++  TP +H LHH++  
Sbjct: 165 ----LSPVAVALLFIFLLFWAVLIHSNLDL--PLPLGWLR---YVFNTPRHHRLHHSKDP 215

Query: 258 --TNYSLFMPIYDYIYGT 273
              NY + +  +D ++GT
Sbjct: 216 YDKNYGVTLTFWDRLFGT 233

Length = 271

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	639
PLN02869	620	fatty aldehyde decarbonylase	100.0
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	100.0
PRK14982	340	acyl-ACP reductase; Provisional	100.0
COG5322	351	Predicted dehydrogenase [General function predicti	100.0
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	100.0
COG3000	271	ERG3 Sterol desaturase [Lipid metabolism]	99.94
KOG0872	312	consensus Sterol C5 desaturase [Lipid transport an	99.86
KOG0874	287	consensus Sphingolipid hydroxylase [Lipid transpor	99.84
PF04116	114	FA_hydroxylase: Fatty acid hydroxylase superfamily	99.68
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	99.31
PLN02434	237	fatty acid hydroxylase	99.07
KOG0539	240	consensus Sphingolipid fatty acid hydroxylase [Lip	97.81
PLN02601	303	beta-carotene hydroxylase	97.48
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.32
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.25
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.12
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.0
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.95
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.9
PLN00203	519	glutamyl-tRNA reductase	96.87
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.8
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.73
PRK08618	325	ornithine cyclodeaminase; Validated	96.64
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.56
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.53
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.36
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.23
PLN03209	576	translocon at the inner envelope of chloroplast su	96.21
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.13
KOG1370	434	consensus S-adenosylhomocysteine hydrolase [Coenzy	96.1
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	96.03
PRK06407	301	ornithine cyclodeaminase; Provisional	96.01
PRK09186	256	flagellin modification protein A; Provisional	96.01
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.98
PRK07340	304	ornithine cyclodeaminase; Validated	95.97
CHL00194	317	ycf39 Ycf39; Provisional	95.95
PRK06949	258	short chain dehydrogenase; Provisional	95.93
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.87
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.87
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.81
PRK06482	276	short chain dehydrogenase; Provisional	95.8
PRK05867	253	short chain dehydrogenase; Provisional	95.78
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.77
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.75
PRK08339	263	short chain dehydrogenase; Provisional	95.74
PRK08265	261	short chain dehydrogenase; Provisional	95.73
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.71
PRK06141	314	ornithine cyclodeaminase; Validated	95.68
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.66
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.66
PRK07454	241	short chain dehydrogenase; Provisional	95.58
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.55
PRK06196	315	oxidoreductase; Provisional	95.54
PRK06823	315	ornithine cyclodeaminase; Validated	95.5
PRK06046	326	alanine dehydrogenase; Validated	95.47
PRK06924	251	short chain dehydrogenase; Provisional	95.46
PRK07478	254	short chain dehydrogenase; Provisional	95.4
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.38
PRK07589	346	ornithine cyclodeaminase; Validated	95.35
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.33
PRK07326	237	short chain dehydrogenase; Provisional	95.31
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.28
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.28
PRK08267	260	short chain dehydrogenase; Provisional	95.26
PRK07067	257	sorbitol dehydrogenase; Provisional	95.26
PRK08643	256	acetoin reductase; Validated	95.25
PRK07890	258	short chain dehydrogenase; Provisional	95.24
PRK07109	334	short chain dehydrogenase; Provisional	95.21
PRK06194	287	hypothetical protein; Provisional	95.19
PLN02780	320	ketoreductase/ oxidoreductase	95.19
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.18
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.18
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.18
PRK09291	257	short chain dehydrogenase; Provisional	95.09
PRK06180	277	short chain dehydrogenase; Provisional	95.06
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.05
PRK06139	330	short chain dehydrogenase; Provisional	95.04
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.03
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.02
PRK06199	379	ornithine cyclodeaminase; Validated	95.02
PRK05717	255	oxidoreductase; Validated	95.02
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.01
PRK06101	240	short chain dehydrogenase; Provisional	94.99
PRK05866	293	short chain dehydrogenase; Provisional	94.97
PRK06500	249	short chain dehydrogenase; Provisional	94.95
PRK07774	250	short chain dehydrogenase; Provisional	94.91
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	94.89
PRK10538	248	malonic semialdehyde reductase; Provisional	94.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.86
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.84
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	94.83
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.77
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.75
PRK07102	243	short chain dehydrogenase; Provisional	94.73
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.73
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	94.72
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.7
PLN02896	353	cinnamyl-alcohol dehydrogenase	94.67
PRK08251	248	short chain dehydrogenase; Provisional	94.66
PRK07825	273	short chain dehydrogenase; Provisional	94.66
PRK07063	260	short chain dehydrogenase; Provisional	94.65
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.63
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.62
KOG1208	314	consensus Dehydrogenases with different specificit	94.6
PRK07677	252	short chain dehydrogenase; Provisional	94.58
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.57
PRK09072	263	short chain dehydrogenase; Provisional	94.56
PRK05854	313	short chain dehydrogenase; Provisional	94.56
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.53
PRK07024	257	short chain dehydrogenase; Provisional	94.53
PRK05876	275	short chain dehydrogenase; Provisional	94.52
PRK12939	250	short chain dehydrogenase; Provisional	94.51
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.5
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.5
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.48
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	94.46
PRK06172	253	short chain dehydrogenase; Provisional	94.42
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.42
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.41
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.4
PRK12746	254	short chain dehydrogenase; Provisional	94.39
PRK06138	252	short chain dehydrogenase; Provisional	94.38
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.37
PRK07074	257	short chain dehydrogenase; Provisional	94.37
COG2910	211	Putative NADH-flavin reductase [General function p	94.37
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.37
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.37
PRK08589	272	short chain dehydrogenase; Validated	94.36
PRK05993	277	short chain dehydrogenase; Provisional	94.35
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.33
PRK07831	262	short chain dehydrogenase; Provisional	94.31
PRK05884	223	short chain dehydrogenase; Provisional	94.28
PRK05872	296	short chain dehydrogenase; Provisional	94.27
PRK06125	259	short chain dehydrogenase; Provisional	94.24
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.23
PRK05650	270	short chain dehydrogenase; Provisional	94.22
PRK07814	263	short chain dehydrogenase; Provisional	94.2
PRK06197	306	short chain dehydrogenase; Provisional	94.18
PRK08017	256	oxidoreductase; Provisional	94.15
PRK05599	246	hypothetical protein; Provisional	94.14
PRK07062	265	short chain dehydrogenase; Provisional	94.13
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.12
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	94.12
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.11
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.1
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.1
PRK09135	249	pteridine reductase; Provisional	94.09
PRK07775	274	short chain dehydrogenase; Provisional	94.05
PRK12829	264	short chain dehydrogenase; Provisional	94.04
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.97
PRK06484	520	short chain dehydrogenase; Validated	93.96
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.94
PF10520	178	Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme	93.94
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.93
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.93
PLN02253	280	xanthoxin dehydrogenase	93.87
PRK06182	273	short chain dehydrogenase; Validated	93.86
PRK06057	255	short chain dehydrogenase; Provisional	93.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.79
PRK06181	263	short chain dehydrogenase; Provisional	93.79
PRK07576	264	short chain dehydrogenase; Provisional	93.78
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.77
PLN02583	297	cinnamoyl-CoA reductase	93.75
PRK07806	248	short chain dehydrogenase; Provisional	93.71
PRK08862	227	short chain dehydrogenase; Provisional	93.67
PRK12742	237	oxidoreductase; Provisional	93.65
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.63
PLN00198	338	anthocyanidin reductase; Provisional	93.63
PRK12828	239	short chain dehydrogenase; Provisional	93.63
PRK08628	258	short chain dehydrogenase; Provisional	93.63
PRK08703	239	short chain dehydrogenase; Provisional	93.62
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	93.58
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.54
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	93.53
PRK05875	276	short chain dehydrogenase; Provisional	93.51
PRK08263	275	short chain dehydrogenase; Provisional	93.43
PRK08303	305	short chain dehydrogenase; Provisional	93.43
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	93.43
PRK08177	225	short chain dehydrogenase; Provisional	93.38
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	93.28
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	93.25
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.24
PLN02494	477	adenosylhomocysteinase	93.21
PRK09134	258	short chain dehydrogenase; Provisional	93.19
PRK07035	252	short chain dehydrogenase; Provisional	93.16
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.15
PLN02427	386	UDP-apiose/xylose synthase	93.14
PRK07832	272	short chain dehydrogenase; Provisional	93.13
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.13
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	93.12
PRK06953	222	short chain dehydrogenase; Provisional	93.1
PRK06914	280	short chain dehydrogenase; Provisional	93.1
PRK12827	249	short chain dehydrogenase; Provisional	93.1
PRK05693	274	short chain dehydrogenase; Provisional	93.09
PRK07985	294	oxidoreductase; Provisional	93.06
PLN02650	351	dihydroflavonol-4-reductase	93.06
PRK12937	245	short chain dehydrogenase; Provisional	93.0
PRK08278	273	short chain dehydrogenase; Provisional	92.98
PRK12743	256	oxidoreductase; Provisional	92.93
PRK07060	245	short chain dehydrogenase; Provisional	92.93
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	92.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	92.87
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	92.87
PRK09242	257	tropinone reductase; Provisional	92.86
PLN02686	367	cinnamoyl-CoA reductase	92.85
PRK06123	248	short chain dehydrogenase; Provisional	92.83
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.82
PRK08291	330	ectoine utilization protein EutC; Validated	92.81
PRK06128	300	oxidoreductase; Provisional	92.78
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.77
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	92.76
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	92.75
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.62
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	92.61
PRK07904	253	short chain dehydrogenase; Provisional	92.59
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	92.59
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	92.58
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	92.58
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.57
PRK09496	453	trkA potassium transporter peripheral membrane com	92.53
TIGR01746	367	Thioester-redct thioester reductase domain. It has	92.47
PRK06198	260	short chain dehydrogenase; Provisional	92.47
PRK08264	238	short chain dehydrogenase; Validated	92.46
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	92.44
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.43
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.42
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.4
PRK06484	520	short chain dehydrogenase; Validated	92.37
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.31
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	92.31
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.29
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	92.27
PLN02214	342	cinnamoyl-CoA reductase	92.27
PRK08936	261	glucose-1-dehydrogenase; Provisional	92.25
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	92.24
KOG0725	270	consensus Reductases with broad range of substrate	92.24
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	92.23
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	92.19
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.18
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.17
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	92.15
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.14
PRK07023	243	short chain dehydrogenase; Provisional	92.14
PRK06841	255	short chain dehydrogenase; Provisional	92.11
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	92.07
PRK07201	657	short chain dehydrogenase; Provisional	92.04
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	91.98
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	91.94
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.89
PRK07069	251	short chain dehydrogenase; Validated	91.83
PRK06114	254	short chain dehydrogenase; Provisional	91.83
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	91.81
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	91.76
PRK06179	270	short chain dehydrogenase; Provisional	91.75
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.74
PRK08219	227	short chain dehydrogenase; Provisional	91.72
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	91.68
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	91.67
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.61
PLN03139	386	formate dehydrogenase; Provisional	91.59
PRK05855	582	short chain dehydrogenase; Validated	91.52
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	91.5
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	91.35
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	91.35
PRK12938	246	acetyacetyl-CoA reductase; Provisional	91.35
PRK12747	252	short chain dehydrogenase; Provisional	91.34
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	91.31
PRK07791	286	short chain dehydrogenase; Provisional	91.27
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	91.24
PRK12744	257	short chain dehydrogenase; Provisional	91.24
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	91.15
PRK06701	290	short chain dehydrogenase; Provisional	91.08
PRK08226	263	short chain dehydrogenase; Provisional	91.07
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.05
PRK07041	230	short chain dehydrogenase; Provisional	91.05
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	91.0
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	90.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	90.87
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	90.84
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	90.78
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.71
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	90.68
PRK06720	169	hypothetical protein; Provisional	90.68
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	90.63
PRK06483	236	dihydromonapterin reductase; Provisional	90.61
TIGR00658	304	orni_carb_tr ornithine carbamoyltransferase. Most	90.58
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.53
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	90.43
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	90.43
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	90.42
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	90.4
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.35
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	90.35
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	90.3
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	90.27
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.16
PRK07577	234	short chain dehydrogenase; Provisional	90.15
PRK07856	252	short chain dehydrogenase; Provisional	90.13
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	90.11
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	90.09
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	90.03
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.02
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.98
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	89.91
PRK06940	275	short chain dehydrogenase; Provisional	89.91
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	89.88
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.8
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	89.66
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.64
PRK08655	437	prephenate dehydrogenase; Provisional	89.61
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	89.59
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	89.59
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	89.46
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	89.4
COG3268	382	Uncharacterized conserved protein [Function unknow	89.38
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	89.27
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	89.25
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	89.2
PRK06523	260	short chain dehydrogenase; Provisional	89.2
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	89.17
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	89.09
PLN02778	298	3,5-epimerase/4-reductase	88.99
PRK12824	245	acetoacetyl-CoA reductase; Provisional	88.99
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	88.92
PRK01713	334	ornithine carbamoyltransferase; Provisional	88.91
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.75
PRK06398	258	aldose dehydrogenase; Validated	88.74
PRK08324	681	short chain dehydrogenase; Validated	88.72
PRK07417	279	arogenate dehydrogenase; Reviewed	88.6
PLN02653	340	GDP-mannose 4,6-dehydratase	88.53
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.52
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.47
PLN00015	308	protochlorophyllide reductase	88.36
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	88.23
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	88.18
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	88.18
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.98
KOG0409	327	consensus Predicted dehydrogenase [General functio	87.88
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	87.86
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	87.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	87.73
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	87.57
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	87.5
PRK00779	304	ornithine carbamoyltransferase; Provisional	87.47
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	87.28
PLN02695	370	GDP-D-mannose-3',5'-epimerase	87.27
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	87.26
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	87.25
PRK08309	177	short chain dehydrogenase; Provisional	87.22
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	87.16
PRK07574	385	formate dehydrogenase; Provisional	87.08
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.06
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	87.03
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.01
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.96
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.96
PLN02928	347	oxidoreductase family protein	86.81
PRK12562	334	ornithine carbamoyltransferase subunit F; Provisio	86.78
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	86.74
PRK10675	338	UDP-galactose-4-epimerase; Provisional	86.56
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	86.37
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	86.24
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.22
PLN02240	352	UDP-glucose 4-epimerase	86.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	86.02
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	85.96
PRK02102	331	ornithine carbamoyltransferase; Validated	85.77
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	85.75
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	85.69
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	85.65
PRK09496	453	trkA potassium transporter peripheral membrane com	85.63
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	85.54
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	85.52
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	85.4
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	85.35
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	85.32
PRK12367	245	short chain dehydrogenase; Provisional	85.18
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	85.17
PLN00112	444	malate dehydrogenase (NADP); Provisional	85.14
COG1028	251	FabG Dehydrogenases with different specificities (	85.02
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.97
PLN02527	306	aspartate carbamoyltransferase	84.94
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	84.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	84.8
PRK02255	338	putrescine carbamoyltransferase; Provisional	84.75
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	84.63
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	84.62
PLN02858	1378	fructose-bisphosphate aldolase	84.51
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	84.38
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	84.35
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	84.26
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	84.03
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	83.87
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	83.83
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	83.72
PRK10669	558	putative cation:proton antiport protein; Provision	83.64
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	83.57
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	83.53
PRK13243	333	glyoxylate reductase; Reviewed	83.45
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	83.39
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	83.38
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	83.07
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	82.97
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	82.83
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	82.82
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	82.63
PRK12480	330	D-lactate dehydrogenase; Provisional	82.53
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	82.35
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	82.34
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	82.16
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	82.13
PLN00016	378	RNA-binding protein; Provisional	82.09
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	82.04
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	81.66
PLN02996	491	fatty acyl-CoA reductase	81.61
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	81.6
KOG2380	480	consensus Prephenate dehydrogenase (NADP+) [Amino	81.59
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	81.59
PRK11891	429	aspartate carbamoyltransferase; Provisional	81.59
PRK03562	621	glutathione-regulated potassium-efflux system prot	81.55
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	81.41
PTZ00354	334	alcohol dehydrogenase; Provisional	81.31
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	81.22
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	81.1
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	80.79
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	80.55
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	80.29
PRK05442	326	malate dehydrogenase; Provisional	80.26
PLN02383	344	aspartate semialdehyde dehydrogenase	80.16
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	80.1

>PLN02869 fatty aldehyde decarbonylase

Probab=100.00  E-value=1.5e-189  Score=1546.66  Aligned_cols=606  Identities=70%  Similarity=1.237  Sum_probs=581.4

Q ss_pred             eeeeccccceEEehhhhhhhhhhhhcCccccCCccchhHHHHHHHHHHHHhHHHHHhhchhhHhcCCCCCCCCccccccc
Q 006607           12 IYLLNVCVQHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIVDKAIEFDQVDR   91 (639)
Q Consensus        12 ~~~~l~~~ky~l~~P~v~~~~~~~~~~~~~~~~~~~~~il~~~llr~l~~~~wi~l~~~~~~~~k~KIq~~~~~~~qvdr   91 (639)
                      .|--||++||++|+|+|+|++|+++.+++++.|+.++++++++++|++++|+|++++|++++++|+||++++++|+|+||
T Consensus        12 pW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~~~~i~f~QvDr   91 (620)
T PLN02869         12 PWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIVDKGIEFEQVDR   91 (620)
T ss_pred             cccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeeeccCCCceeecc
Confidence            46678999999999999999999998766667777999999999999999999999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCCh
Q 006607           92 ERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEP  171 (639)
Q Consensus        92 E~~~~n~iil~~ll~~~~~~~~p~~~~~lP~w~~~gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~  171 (639)
                      |++||||+|++.++++++++.+| +.+.+|.|++.|++..+++|+++.|++|||+||++|++++||++|++||++.+|+|
T Consensus        92 e~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~HkvHHss~~~~P  170 (620)
T PLN02869         92 ERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEP  170 (620)
T ss_pred             ccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCCCCCc
Confidence            99999999999999999998999 78999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHH
Q 006607          172 ITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSL  251 (639)
Q Consensus       172 ~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~l  251 (639)
                      +++..+++.|++.+.+++.+|+++..+++..|+.++++|+++.++.++++|||+|++|+++++.+|+++|+++||++|++
T Consensus       171 ~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLkyll~TPsfHdl  250 (620)
T PLN02869        171 ITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLKYLMYTPSYHSL  250 (620)
T ss_pred             hhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcchheecCchHHhH
Confidence            99875444688877777889998877777778999999999999999999999999999999888999999999999999


Q ss_pred             hhcCCCCCcCCCcchhhhhcCCCCCCCchHHHHHhhcCCccccccCCCCceeeecccCCccccccccchhhhhccCCccc
Q 006607          252 HHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIGFASLASKPHRY  331 (639)
Q Consensus       252 HH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~~~~~~~~~~~~~~~~~pd~v~l~h~~~~~s~~h~~~~~~~~~~~p~~~  331 (639)
                      ||+++++|||.+|++||++|||+++++|+++|+...  +.++     +||||||||+||++|+||+||||||+||+||+ 
T Consensus       251 HHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~~~s~as~p~~-  322 (620)
T PLN02869        251 HHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLGFASLASKPYI-  322 (620)
T ss_pred             HhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchHHHHhccCCcc-
Confidence            999999999999999999999999999999999887  4344     99999999999999999999999999999999 


Q ss_pred             cccCcchhhcchhhHHHHHHHHHHHHhcceEEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCC
Q 006607          332 TYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGV  411 (639)
Q Consensus       332 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~  411 (639)
                          ++||||||||+|+++|+++ |+|||+|++|+|+|||+++|||+||||||||++|+++|+||++||+||++|||+||
T Consensus       323 ----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie~ail~ad~~Gv  397 (620)
T PLN02869        323 ----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIEEAILEADKRGV  397 (620)
T ss_pred             ----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHHHHHHHHHhcCC
Confidence                9999999999999999999 79999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE
Q 006607          412 KVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK  491 (639)
Q Consensus       412 kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~  491 (639)
                      ||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+  |||||||.+|||||||
T Consensus       398 kv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~raia~~lc~r~i~  474 (620)
T PLN02869        398 KVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYFIASALCQRGIQ  474 (620)
T ss_pred             EEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHHHHHHHHhcCCe
Confidence            999999999999999999999999999 9999999999999999999999999999999996  9999999999999999


Q ss_pred             EEecchhhHHHHHhhCCc-ccccceeeeccccccceeEEEEcCcCChhhhhcCCCCceeecccccCCcCCCCCceeecCC
Q 006607          492 VATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTP  570 (639)
Q Consensus       492 v~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~  570 (639)
                      ++..++|||++||+|+++ ++|+||+++|++   +||+|||||+++++||+||||||+||||||+|+++.||||+|+++|
T Consensus       475 ~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~dC~Y~~~p  551 (620)
T PLN02869        475 VATFREDEYEKLNKKLPNTECGSKLLLSKNY---SEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRKDCFYHTTP  551 (620)
T ss_pred             EeecCHHHHHHHHHhccchhhhhhEEEeecc---CceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhccccccCCc
Confidence            655899999999999988 899999999998   9999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 006607          571 AMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV  638 (639)
Q Consensus       571 a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~i-v~~i~~iw~aa~kHGF~p~~~~  638 (639)
                      ||++|+++||++|||||||||+|+||||||||||||||++|||| + |++||++|+||+||||+|+...
T Consensus       552 am~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~  619 (620)
T PLN02869        552 AMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP  619 (620)
T ss_pred             cccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence            99999999999999999999999999999999999999999999 8 9999999999999999998754

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=1.9e-67  Score=495.84  Aligned_cols=164  Identities=61%  Similarity=1.106  Sum_probs=160.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhcCCC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQARAPK  545 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~a~~  545 (639)
                      |||+|+++  |||||||.+|||||+||+|.++|+|++||++++++.++||++++++   ++|+|||||+||++||++|||
T Consensus         1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~---~~K~WlVGd~l~~~EQ~~Ap~   75 (164)
T PF12076_consen    1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSY---QAKTWLVGDGLTEEEQKWAPK   75 (164)
T ss_pred             Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCC---CceeEEeCCCCCHHHHhcCCC
Confidence            79999995  9999999999999999999999999999999999999999999998   679999999999999999999


Q ss_pred             CceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchhhhhHHHHHH
Q 006607          546 GTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWH  625 (639)
Q Consensus       546 G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~iw~  625 (639)
                      ||+|||||||||+++||||+|+++|||++|++++|+||||||||||+||||||||||||||||++||||.-|++||++|+
T Consensus        76 Gt~FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~  155 (164)
T PF12076_consen   76 GTHFIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWE  155 (164)
T ss_pred             CCEEeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999943999999999


Q ss_pred             HHHhcCCcc
Q 006607          626 ASLRHGFRP  634 (639)
Q Consensus       626 aa~kHGF~p  634 (639)
                      ||++|||+|
T Consensus       156 AAl~HGF~P  164 (164)
T PF12076_consen  156 AALKHGFRP  164 (164)
T ss_pred             HHHHcCCCC
Confidence            999999998

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK14982 acyl-ACP reductase; Provisional

Probab=100.00  E-value=1.5e-36  Score=322.45  Aligned_cols=263  Identities=15%  Similarity=0.189  Sum_probs=204.9

Q ss_pred             HhcceEEEeecccCcc---cceeEEe--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce
Q 006607          357 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI  431 (639)
Q Consensus       357 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~  431 (639)
                      ....+|++++-.++--   ..+-|.|  |-.+=|- ...+.|.+.|+|++|+..|+|.|++|++||++++   +.+++. 
T Consensus        35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~-  109 (340)
T PRK14982         35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENF-  109 (340)
T ss_pred             hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCc-
Confidence            3346899999888544   4477886  3333233 4445666656799999999999999999999999   665552 


Q ss_pred             eeecCCC--Ccce---eeecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhc-cCc-EEEe-
Q 006607          432 YLERQPN--KLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT-  494 (639)
Q Consensus       432 ~~~k~p~--~L~i---rvv~Gnsltaa~v~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~-~~~-~v~~-  494 (639)
                      .+.++.+  .+++   +|||||||||++.+++++.         ..++|+|+||+|  +||+.+|+.|++ .|+ ++++ 
T Consensus       110 ~~~~~~~~r~i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv  187 (340)
T PRK14982        110 NLLQHKQVRNTTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV  187 (340)
T ss_pred             ccccccccccceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence            3332211  1455   8999999999999998865         368999999999  999999999985 454 6666 


Q ss_pred             -cchhhHHHHHhhCCcccccceeeeccccc--cceeE--EEEcC----cCChhhhhcCCCCceeecccccCCc----CCC
Q 006607          495 -ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKI--WLVGD----DLTGKEQARAPKGTIFIPYTQIPPR----KLR  561 (639)
Q Consensus       495 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~v--wivg~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R  561 (639)
                       |++++++.+++++..+.      +.++.+  +++++  +..+.    .+++++.   ++|.++||.+ +|+.    .-|
T Consensus       188 ~R~~~rl~~La~el~~~~------i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l---~~~~~viDiA-vPRDVd~~v~~  257 (340)
T PRK14982        188 ARQQERLQELQAELGGGK------ILSLEEALPEADIVVWVASMPKGVEIDPETL---KKPCLMIDGG-YPKNLDTKVQG  257 (340)
T ss_pred             cCCHHHHHHHHHHhcccc------HHhHHHHHccCCEEEECCcCCcCCcCCHHHh---CCCeEEEEec-CCCCCCcccCC
Confidence             88899999998865332      223332  44444  44443    4888777   7999999999 5554    335


Q ss_pred             CCceeecCCccccCCCCc-cc-cccccccCcchhhhHHHHHHHHHhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccC
Q 006607          562 KDCFYHSTPAMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPL  635 (639)
Q Consensus       562 ~dc~y~~~~a~~~P~~~~-~~-~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~-e~G~--i-v~~i~~iw~aa~kHGF~p~  635 (639)
                      +|+.+.+++.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++||  | ++||++|.++|.||||+|+
T Consensus       258 ~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~  337 (340)
T PRK14982        258 PGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPL  337 (340)
T ss_pred             CCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCccc
Confidence            999999999999999987 43 346789999999999999999999999999 5997  8 9999999999999999996


Q ss_pred             C
Q 006607          636 F  636 (639)
Q Consensus       636 ~  636 (639)
                      -
T Consensus       338 ~  338 (340)
T PRK14982        338 L  338 (340)
T ss_pred             c
Confidence            4

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=100.00  E-value=6.4e-37  Score=309.48  Aligned_cols=234  Identities=20%  Similarity=0.225  Sum_probs=191.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCce-eeecCCCCcc-eeeecCChhHHHHHHhcCcC----
Q 006607          388 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI-YLERQPNKLK-IKVVDGSSLAAAVVVNSLPK----  461 (639)
Q Consensus       388 ~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~-~~~k~p~~L~-irvv~Gnsltaa~v~~~i~~----  461 (639)
                      +-++.|++.|.+.+|++.|+|.|++|++||+|++   +.++-+. ...++|+ +. +|+|||||+||+++|.++.+    
T Consensus        85 ~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFss---IVgn~~~n~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~  160 (351)
T COG5322          85 LRSRPKAATRRVLNAMALAQKLGADVTGLGGFSS---IVGNLGQNVQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQ  160 (351)
T ss_pred             HhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhh---hhccccccccccceE-EEEEecccCCccchHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999   6664443 4458999 88 99999999999999999977    


Q ss_pred             -----CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe------cchhhHHHHHhhCCcccccceeeeccccc--ccee
Q 006607          462 -----TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTK  527 (639)
Q Consensus       462 -----~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~  527 (639)
                           ..++|.+|||||  +||++||+||+ +-++++++      ++++++..||+++..+.    +-+++++.  ++..
T Consensus       161 lGidlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~  234 (351)
T COG5322         161 LGIDLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDIL  234 (351)
T ss_pred             hCcCHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceE
Confidence                 488999999999  99999999999 77777777      66777888888877776    22334543  5557


Q ss_pred             EEEE----cCcCChhhhhcCCCCceeecccc---cCCc-CCCCCceeecCCccccCCC--CccccccccccCcchhhhHH
Q 006607          528 IWLV----GDDLTGKEQARAPKGTIFIPYTQ---IPPR-KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWR  597 (639)
Q Consensus       528 vwiv----g~~~~~~~q~~a~~G~~f~~~~~---~~~~-~~R~dc~y~~~~a~~~P~~--~~~~~~~e~~~pr~~~~Ac~  597 (639)
                      +|++    |-.|.|+.+   +||...+|=..   +++. +-|.|+..++++.+.-|.+  |..+...+|  |.|+++||.
T Consensus       235 v~vAs~~~g~~I~pq~l---kpg~~ivD~g~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aCl  309 (351)
T COG5322         235 VWVASMPKGVEIFPQHL---KPGCLIVDGGYPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACL  309 (351)
T ss_pred             EEEeecCCCceechhhc---cCCeEEEcCCcCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHH
Confidence            7994    556677666   78887777663   4444 4556778888888877776  666655554  999999999


Q ss_pred             HHHHHHHhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 006607          598 IAGIIHALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF  636 (639)
Q Consensus       598 a~~~v~alEgw~~~-e~G~-i-v~~i~~iw~aa~kHGF~p~~  636 (639)
                      ||+||+++|||++| +||| | +|||++|.++|.||||+|+.
T Consensus       310 AEtlil~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~  351 (351)
T COG5322         310 AETLILEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD  351 (351)
T ss_pred             HHHHHHHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999 5999 8 99999999999999999974

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=100.00  E-value=9e-35  Score=296.87  Aligned_cols=216  Identities=19%  Similarity=0.239  Sum_probs=178.7

Q ss_pred             hHHHHHHHHHHHHhHHHHHhh--chhhHhcCCCCCCCCccccccccccch-----hhhHHHHHHHHHHHhhcC-C---CC
Q 006607           49 LIFPFLLLRMLHDQIWISLSR--YRTAKRNNRIVDKAIEFDQVDRERNWD-----DQIVFNGLIFYIVRMLIP-P---SY  117 (639)
Q Consensus        49 ~il~~~llr~l~~~~wi~l~~--~~~~~~k~KIq~~~~~~~qvdrE~~~~-----n~iil~~ll~~~~~~~~p-~---~~  117 (639)
                      .++...++.++.+.+|+.++.  .+++.||||||+++.+  ..++.++|.     ||++++.++..+.+...+ .   ..
T Consensus        34 ~~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~  111 (283)
T KOG0873|consen   34 PFIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSG  111 (283)
T ss_pred             hHHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcC
Confidence            377788888888999998774  6789999999998654  244444443     777777777666654432 1   22


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 006607          118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM  197 (639)
Q Consensus       118 ~~lP~w~~~gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~  197 (639)
                      ..||.|.+  ++.+++++++++|+.|||.||++|++++||.+||+||++.+|.+.++.|+||+|+++.++.   |+.++.
T Consensus       112 ~plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~~---~~~~p~  186 (283)
T KOG0873|consen  112 APLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGLG---TVMGPA  186 (283)
T ss_pred             CCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCCh---hhhhhH
Confidence            34667665  9999999999999999999999999999999999999999999999999999999998763   444444


Q ss_pred             HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCCCCCcCCCcchhhhhcCCCCCC
Q 006607          198 VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRS  277 (639)
Q Consensus       198 l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~  277 (639)
                      +++. |+.+.++|+++..+.++..||||++ |+++.+.+|+.    ++.++||+||..+.+||+..|+.||||+||....
T Consensus       187 ~~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~  260 (283)
T KOG0873|consen  187 LLCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTY  260 (283)
T ss_pred             Hhhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccH
Confidence            3443 9999999999999999999999997 99999888873    6899999999999999999999999999997543

>COG3000 ERG3 Sterol desaturase [Lipid metabolism]

Probab=99.94  E-value=3e-26  Score=237.53  Aligned_cols=152  Identities=27%  Similarity=0.436  Sum_probs=131.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006607          127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS  206 (639)
Q Consensus       127 gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~  206 (639)
                      .+++++++.+++.|+.+||.||+.|+.++||++|++||++.+|+++++.+.||+|.++......+|+.++   + .+..+
T Consensus        94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l~---~-~~~~~  169 (271)
T COG3000          94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLL---G-LSPVA  169 (271)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHHh---c-CCHHH
Confidence            3678888888999999999999999999999999999999999999999999999999876655665542   3 57777


Q ss_pred             HHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCC--CCCcCCCcchhhhhcCCCCCCCchHHHH
Q 006607          207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK  284 (639)
Q Consensus       207 i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~--~~NYG~~f~lWDrLFGT~~~~~~~~~~~  284 (639)
                      +..+.++..+.+.++|||++. | ..   .+++++++.+|++|++||+++  ++|||.++++|||+|||+.++.++.+++
T Consensus       170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~  244 (271)
T COG3000         170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK  244 (271)
T ss_pred             HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence            777888888999999999996 4 22   345566789999999999997  4999999999999999999999888888


Q ss_pred             Hhh
Q 006607          285 SLK  287 (639)
Q Consensus       285 ~~~  287 (639)
                      +..
T Consensus       245 ~~~  247 (271)
T COG3000         245 IGV  247 (271)
T ss_pred             ccc
Confidence            665

>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]

Probab=99.86  E-value=8.7e-22  Score=199.36  Aligned_cols=143  Identities=20%  Similarity=0.370  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006607          127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS  206 (639)
Q Consensus       127 gli~~lll~llv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~  206 (639)
                      ..++.++++++..||.+||.||.+|++.+||+.|+.||.+...+|+++.++||++.+++++    |-.+..+..+.|..+
T Consensus       127 ~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqai----p~~I~~Fi~Plh~~t  202 (312)
T KOG0872|consen  127 LLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQAI----PYHIYPFIFPLHKVT  202 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhhc----hhHheeeeecchHHH
Confidence            3677888889999999999999999999999999999999999999999999999988764    444433333446666


Q ss_pred             HHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcCCCCCcCCCcchhhhhcCCCCCCCchHHH
Q 006607          207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE  283 (639)
Q Consensus       207 i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~lWDrLFGT~~~~~~~~~~  283 (639)
                      .++...+..+++.+.|.|.-..          +.+.++||.+|..||..++.|||.++.+|||+|||++.+.++.++
T Consensus       203 ~L~l~~f~~iwt~~IHd~~~~~----------l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d  269 (312)
T KOG0872|consen  203 YLSLFTFVNIWTISIHDGIYGS----------LNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD  269 (312)
T ss_pred             HHHHHHHHHhHheeeecccccc----------ccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence            6655566678888999885431          233468999999999999999999999999999999988876555

>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]

Probab=99.84  E-value=4.5e-22  Score=195.86  Aligned_cols=147  Identities=20%  Similarity=0.352  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-HhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 006607          128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA  205 (639)
Q Consensus       128 li~~lll~llv~Df~~Yw~HRllH-~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l-~~iPl~~~~l~g~~~~~  205 (639)
                      ...+++..+++.|.|.|++||.|| .+.+|+.+|++||+-.+|.+..|.|.||+|.++...+ -++.++.   .| .++-
T Consensus       122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l~---sg-lspr  197 (287)
T KOG0874|consen  122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFLL---SG-LSPR  197 (287)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHHH---cC-CCcc
Confidence            456778888999999999999999 7899999999999999999999999999999987542 1122221   12 2333


Q ss_pred             HHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC--CCCCcC-CCcchhhhhcCCCCCCCchHH
Q 006607          206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYS-LFMPIYDYIYGTIDRSSDSVY  282 (639)
Q Consensus       206 ~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG-~~f~lWDrLFGT~~~~~~~~~  282 (639)
                      +.+++..+.+.-++.+||||-+ |..+++.+  .   -+.+.+||+||+.  ..+||+ ++|++||+++||+.+.+.|..
T Consensus       198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~--F---~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~  271 (287)
T KOG0874|consen  198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF--F---PNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR  271 (287)
T ss_pred             ceEEEEEeeeeeeecccccccc-CCCceeEe--c---cCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence            3333444556778899999987 88776652  1   2579999999998  579998 589999999999998875544


Q ss_pred             HH
Q 006607          283 EK  284 (639)
Q Consensus       283 ~~  284 (639)
                      .+
T Consensus       272 ~e  273 (287)
T KOG0874|consen  272 LE  273 (287)
T ss_pred             cc
Confidence            43

>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases

Probab=99.68  E-value=6.1e-17  Score=144.56  Aligned_cols=111  Identities=29%  Similarity=0.480  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHhh-HhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 006607          134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII  212 (639)
Q Consensus       134 l~llv~Df~~Yw~HRllH-~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~l~g~~~~~~i~~y~~  212 (639)
                      +.+++.|+++||+||++| .+++| ++|+.||+..+|+++++.+.+|+|.++..++   ++.++.+++..+..++.++.+
T Consensus         3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   78 (114)
T PF04116_consen    3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA   78 (114)
T ss_pred             eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence            456788999999999999 66666 9999999999999999999999999987653   333333344567778888888


Q ss_pred             HHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhc
Q 006607          213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT  254 (639)
Q Consensus       213 ~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~  254 (639)
                      +..+.+.++|||+.. +     ..+..+++..+|++|+.||+
T Consensus        79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~  114 (114)
T PF04116_consen   79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS  114 (114)
T ss_pred             HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence            888999999999921 1     12456677889999999995

Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=99.31  E-value=8.1e-12  Score=122.82  Aligned_cols=166  Identities=14%  Similarity=0.088  Sum_probs=117.4

Q ss_pred             ecCChhHHHHHHhcCcC---------CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc
Q 006607          445 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH  513 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~---------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~  513 (639)
                      ++||++|||++++.+.+         ..++|+++|++|  .+|+++++.|+++|.+|.+  |+.++.+++.+++......
T Consensus         1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~   78 (194)
T cd01078           1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE   78 (194)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence            68999999999988875         346999999999  9999999999999999988  8889999888776433222


Q ss_pred             ceee--ecc---ccc--cceeEEE----EcCcCChhhhhcCC-CCceeecccccCCc-----CCCCCceeecCCccccCC
Q 006607          514 NLVL--STS---YAA--HKTKIWL----VGDDLTGKEQARAP-KGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPP  576 (639)
Q Consensus       514 ~l~~--~~~---~~~--~~~~vwi----vg~~~~~~~q~~a~-~G~~f~~~~~~~~~-----~~R~dc~y~~~~a~~~P~  576 (639)
                      .+..  ..+   +++  ++++++|    .|.. .+.+..+.+ +|.+++|+...|+.     +.|+|.++.+++...-| 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~-~~~~~~~~~~~~~vv~D~~~~~~~~~~~~~~~~~~~~~~g~~~~g~-  156 (194)
T cd01078          79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVE-LLEKLAWAPKPLAVAADVNAVPPVGIEGIDVPDKGVDREGKVPYGA-  156 (194)
T ss_pred             cEEEeeCCCHHHHHHHHhcCCEEEECCCCCce-echhhhcccCceeEEEEccCCCCCCcccccccCCceecCCCeEEEe-
Confidence            2221  222   222  6677777    3332 122222233 48999999954443     57899999998733212 


Q ss_pred             CCccccccccccCcchhhhHHHHHHHHHhcCCCCCccchhhhhHHHHHHHHHhc
Q 006607          577 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH  630 (639)
Q Consensus       577 ~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~iv~~i~~iw~aa~kH  630 (639)
                            ...+++|+++.+||++|.|.  +|++..+        .++|-+.|+||
T Consensus       157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~~--------~~~~~~~~~~~  194 (194)
T cd01078         157 ------IGVGGLKMKTHRACIAKLFE--SNPLVLD--------AEEIYDLAKEM  194 (194)
T ss_pred             ------eccchhHHHHHHHHHHHHhh--cCCeeec--------hHHHHHHHhcC
Confidence                  13478999999999999998  4766543        55666666665

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN02434 fatty acid hydroxylase

Probab=99.07  E-value=3e-09  Score=108.74  Aligned_cols=136  Identities=20%  Similarity=0.268  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhHh-------hhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006607          128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM--  197 (639)
Q Consensus       128 li~~lll~llv~Df~~Yw~HRl-lH~~-------~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~--  197 (639)
                      .+..+++.+++..+.+|.+||. +|.+       .+....|..||..+  .......++|.-.++....+..++..+.  
T Consensus        83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P--~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~  160 (237)
T PLN02434         83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHP--MDGLRLVFPPAATAILCVPFWNLIALFATP  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCC--CCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence            4556777888999999999997 7842       23346789999753  3333344666554443322221111100  


Q ss_pred             -HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCCCC
Q 006607          198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID  275 (639)
Q Consensus       198 -l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT~~  275 (639)
                       .....-...+.+|+. .++.....|.+ +  |..     ++++.   --++|..||.+ .+.|||...++||++|||..
T Consensus       161 ~~a~~~~~G~l~gYl~-Yd~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~  228 (237)
T PLN02434        161 ATAPALFGGGLLGYVM-YDCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP  228 (237)
T ss_pred             hHHHHHHHHHHHHHHH-HHHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence             000011223445544 45677777864 2  431     22332   37899999987 59999999999999999985


Q ss_pred             CC
Q 006607          276 RS  277 (639)
Q Consensus       276 ~~  277 (639)
                      ++
T Consensus       229 ~~  230 (237)
T PLN02434        229 PS  230 (237)
T ss_pred             Cc
Confidence            54

>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]

Probab=97.81  E-value=4.4e-05  Score=76.38  Aligned_cols=136  Identities=21%  Similarity=0.291  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-hhHhh---------hhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006607          130 LTILVHMGPVEFLYYWFHRA-LHHHY---------LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM--  197 (639)
Q Consensus       130 ~~lll~llv~Df~~Yw~HRl-lH~~~---------Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~~--  197 (639)
                      .-+++.++...+.+|-+||+ +|.+.         +---+|..||...  ..-.-..++|+-..+....+..++..+.  
T Consensus        85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P--~D~~RLVfPP~~~~il~~pfy~~~~~vl~~  162 (240)
T KOG0539|consen   85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLP--MDGYRLVFPPTPFAILAAPFYLILSLVLPH  162 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCC--CCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence            34556677899999999997 68541         1124799999753  2223345666665555443333322211  


Q ss_pred             -HhhhhhHHHHHHHHHHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCCCC
Q 006607          198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID  275 (639)
Q Consensus       198 -l~g~~~~~~i~~y~~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT~~  275 (639)
                       .....-...+++|+.|. .....-|-|--  |+     .|.++   .-.++|.-||-+ .+.-||....+||++|||.-
T Consensus       163 ~~~~a~faG~l~GYV~YD-mtHYyLHhg~p--~~-----~~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~  231 (240)
T KOG0539|consen  163 PVAPAGFAGGLLGYVCYD-MTHYYLHHGSP--PK-----RPYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG  231 (240)
T ss_pred             chhhhhhccchhhhhhhh-hhhhhhhcCCC--CC-----chHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence             00011123455676654 44555554311  22     12332   237789999987 79999999999999999987


Q ss_pred             CCC
Q 006607          276 RSS  278 (639)
Q Consensus       276 ~~~  278 (639)
                      +..
T Consensus       232 ~~~  234 (240)
T KOG0539|consen  232 PLK  234 (240)
T ss_pred             CCc
Confidence            654

>PLN02601 beta-carotene hydroxylase

Probab=97.48  E-value=0.00094  Score=69.28  Aligned_cols=132  Identities=20%  Similarity=0.296  Sum_probs=69.1

Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhhhhhccccCccccCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 006607          118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT  196 (639)
Q Consensus       118 ~~lP~w~~~gli~~lll~llv~Df~~Yw~HRl-lH~~~Ly~~~H~vHH~s~~p~~~ta~~~hplE~ll~~~l~~iPl~~~  196 (639)
                      .+.|.-...+.+..++..++..|++-+|.||. ||.  +.|..|+-||+...- ++.  ..+.     +++++.+|.+.+
T Consensus       126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~g-~FE--~NDl-----FaVifAvpAIaL  195 (303)
T PLN02601        126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPREG-AFE--LNDV-----FAIVNAVPAIGL  195 (303)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCCC-Ccc--cccc-----hhhhhHHHHHHH
Confidence            45664222223334455566789999999997 776  347899999987642 221  1111     111222333333


Q ss_pred             HHhhhhh-----------HHHHHHHH-HHHHHHHhhccCCceeccccchhccCCcccccCChhhHHHhhcC--CCCCcCC
Q 006607          197 MVLKNAS-----------IASFVGYI-IYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL  262 (639)
Q Consensus       197 ~l~g~~~-----------~~~i~~y~-~~~~~~~~~~HsGye~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~  262 (639)
                      +..|..+           -..+.+|. +|+.+...+.|--+   |......-|+++.   -...|.+||+.  ...+||.
T Consensus       196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf  269 (303)
T PLN02601        196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL  269 (303)
T ss_pred             HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence            2222210           01112232 24444555666432   3322222344554   47899999983  5689998


Q ss_pred             Ccc
Q 006607          263 FMP  265 (639)
Q Consensus       263 ~f~  265 (639)
                      ++.
T Consensus       270 ll~  272 (303)
T PLN02601        270 FLG  272 (303)
T ss_pred             Eec
Confidence            654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.32  E-value=0.00045  Score=64.75  Aligned_cols=92  Identities=21%  Similarity=0.241  Sum_probs=64.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----Ec
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VG  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg  532 (639)
                      ..++|+++||.   ..|++++.+|++.|.+ +++  |+.+|.++|.++.+... -..+...++.+  .+++++|    +|
T Consensus        11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHHHHHHHhhCCeEEEecCCC
Confidence            57899999995   7999999999998988 777  99999999999873322 11122223432  6778877    44


Q ss_pred             -CcCChhhhhcCCCCc-eeecccccCCc
Q 006607          533 -DDLTGKEQARAPKGT-IFIPYTQIPPR  558 (639)
Q Consensus       533 -~~~~~~~q~~a~~G~-~f~~~~~~~~~  558 (639)
                       ..++++....+++.. +++|.+ +|+.
T Consensus        87 ~~~i~~~~~~~~~~~~~~v~Dla-~Pr~  113 (135)
T PF01488_consen   87 MPIITEEMLKKASKKLRLVIDLA-VPRD  113 (135)
T ss_dssp             STSSTHHHHTTTCHHCSEEEES--SS-S
T ss_pred             CcccCHHHHHHHHhhhhceeccc-cCCC
Confidence             356667775444444 899998 6665

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.25  E-value=0.00058  Score=71.53  Aligned_cols=49  Identities=16%  Similarity=0.252  Sum_probs=45.0

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      ...+.++++||++  -||+++|+.|+++|.+|++  |++||+++|++++....
T Consensus         4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~   54 (265)
T COG0300           4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT   54 (265)
T ss_pred             CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence            3567899999997  9999999999999999999  99999999999987766

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.12  E-value=0.00064  Score=70.12  Aligned_cols=44  Identities=25%  Similarity=0.323  Sum_probs=41.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +-|+++||++  -||.|+|+.|++.|.+|.+  |++||+++|++++++
T Consensus         7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~   52 (246)
T COG4221           7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA   52 (246)
T ss_pred             cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence            6789999996  9999999999999999999  999999999999886

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.00  E-value=0.00087  Score=71.17  Aligned_cols=47  Identities=17%  Similarity=0.283  Sum_probs=42.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  512 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~  512 (639)
                      .=.+|+|||.  +||++.|+-|||||.+|.+  |++||++.+++|+.+...
T Consensus        50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~   98 (312)
T KOG1014|consen   50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK   98 (312)
T ss_pred             CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC
Confidence            4567889997  9999999999999999999  999999999999877654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.95  E-value=0.002  Score=67.48  Aligned_cols=125  Identities=15%  Similarity=0.121  Sum_probs=78.5

Q ss_pred             eecCChhHHHHHH-hcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeee-
Q 006607          444 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLS-  518 (639)
Q Consensus       444 vv~Gnsltaa~v~-~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~-  518 (639)
                      =|||-...++.-- .......++|+|+|+ |  -+|++++.+|++.| .+|++  |+.++.+++++++.....   +.+ 
T Consensus       103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~---~~~~  176 (278)
T PRK00258        103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK---AELD  176 (278)
T ss_pred             cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---eeec
Confidence            4677776666642 233445678999998 6  89999999999999 67888  999999999888653211   111 


Q ss_pred             cccc-c-cceeEEE----EcC----cCChhhhhcCCCCceeecccccCCc-C----CC-CCceeecCCcccc
Q 006607          519 TSYA-A-HKTKIWL----VGD----DLTGKEQARAPKGTIFIPYTQIPPR-K----LR-KDCFYHSTPAMII  574 (639)
Q Consensus       519 ~~~~-~-~~~~vwi----vg~----~~~~~~q~~a~~G~~f~~~~~~~~~-~----~R-~dc~y~~~~a~~~  574 (639)
                      .+.. . ..++++|    +|-    ..+|-+....++++.++|++--|.. .    .| +-|.+..+-.|-+
T Consensus       177 ~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~Ml~  248 (278)
T PRK00258        177 LELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAKAQGARTIDGLGMLV  248 (278)
T ss_pred             ccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCcCeecCCHHHHH
Confidence            1222 2 4567777    332    1223333456778888888743322 1    12 5666666666643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.90  E-value=0.0023  Score=66.57  Aligned_cols=135  Identities=17%  Similarity=0.207  Sum_probs=83.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  522 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  522 (639)
                      |||-....+.--.......+.|+++|+ |  -+|+++|..|++.|.+|++  |+.++.+++.+++....  . +...++.
T Consensus        99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~-~~~~~~~  172 (270)
T TIGR00507        99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--E-IQAFSMD  172 (270)
T ss_pred             CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--c-eEEechh
Confidence            677777666322122334678999999 6  8999999999999999888  88889998888754311  1 1111222


Q ss_pred             --c-cceeEEE----Ec--CcCC--hhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCccccccc
Q 006607          523 --A-HKTKIWL----VG--DDLT--GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCE  585 (639)
Q Consensus       523 --~-~~~~vwi----vg--~~~~--~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~~~~e  585 (639)
                        . .+++++|    +|  ...+  +-+....++|.+++|.+=.|++     +.| +.|.+.++-.|-+=   |+..++|
T Consensus       173 ~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T~ll~~A~~~G~~~vdG~~Ml~~---Qa~~~f~  249 (270)
T TIGR00507       173 ELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGETPFLAEAKSLGTKTIDGLGMLVA---QAALAFE  249 (270)
T ss_pred             hhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeeeCCHHHHHH---HHHHHHH
Confidence              1 4567777    22  1111  1112345788899999865554     223 67888877777542   2333344


Q ss_pred             ccc
Q 006607          586 NWL  588 (639)
Q Consensus       586 ~~~  588 (639)
                      .|.
T Consensus       250 ~w~  252 (270)
T TIGR00507       250 LWT  252 (270)
T ss_pred             HHc
Confidence            554

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN00203 glutamyl-tRNA reductase

Probab=96.87  E-value=0.0054  Score=70.01  Aligned_cols=212  Identities=14%  Similarity=0.185  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcC----c---CCCcEE
Q 006607          395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSL----P---KTTAHV  466 (639)
Q Consensus       395 in~~I~~Ai~~A~~~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i----~---~~~~~V  466 (639)
                      |=.+|.+|...|++.|.-    | .||.-   = ...+.+.|.-. =+.++-.|..=.+.++++-.    +   -..++|
T Consensus       199 IlgQVK~A~~~A~~~g~~----g~~L~~L---F-~~Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkV  269 (519)
T PLN00203        199 ILAQVKQVVKVGQGVDGF----GRNLSGL---F-KHAITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARV  269 (519)
T ss_pred             HHHHHHHHHHHHHHcCCc----cHHHHHH---H-HHHHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEE
Confidence            334488888888887742    2 11110   0 00222333321 12344444433333333322    3   236899


Q ss_pred             EEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE----cC-cCC
Q 006607          467 LLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GD-DLT  536 (639)
Q Consensus       467 ~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv----g~-~~~  536 (639)
                      +|+|+ |  ++|+++++.|+.+|. +|++  |+.++.+.++++.+. .........+.. . .+++++|.    ++ .++
T Consensus       270 lVIGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~  345 (519)
T PLN00203        270 LVIGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKPLDEMLACAAEADVVFTSTSSETPLFL  345 (519)
T ss_pred             EEEeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeecHhhHHHHHhcCCEEEEccCCCCCeeC
Confidence            99999 6  999999999999996 5777  999999999988642 111101112333 2 66777662    22 567


Q ss_pred             hhhhhcCCCC-------ceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH-
Q 006607          537 GKEQARAPKG-------TIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-  603 (639)
Q Consensus       537 ~~~q~~a~~G-------~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~-  603 (639)
                      ++..+.++++       .+|+|.+ +|+. +  +.  +++.+.+      -++++.  .++-.++.|.-.+=.|+.||- 
T Consensus       346 ~e~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lyd------iDdL~~--i~~~n~~~R~~~~~~Ae~II~e  416 (519)
T PLN00203        346 KEHVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYN------VDDLKE--VVAANKEDRLRKAMEAQTIIRE  416 (519)
T ss_pred             HHHHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEE------eccHHH--HHHHhHHHHHHHHHHHHHHHHH
Confidence            7777776542       5899999 8875 2  21  2222111      123332  255567777777777888875 


Q ss_pred             ---HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607          604 ---ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  628 (639)
Q Consensus       604 ---alEgw~~~-e~G~-i--v-~~i~~iw~aa~  628 (639)
                         .++.|... +... |  + ++.++|-+.-+
T Consensus       417 e~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~El  449 (519)
T PLN00203        417 ESKNFEAWRDSLETVPTIKKLRSYAERIRAAEL  449 (519)
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence               78888766 6777 5  4 66666655443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.80  E-value=0.004  Score=69.05  Aligned_cols=135  Identities=18%  Similarity=0.182  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHHhhHhhhhhhccccCccccCCChh---------hhhhhhhHHHHHHHHHHHHHHHHHH-Hhhh-----
Q 006607          137 GPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKN-----  201 (639)
Q Consensus       137 lv~Df~~Yw~HRllH~~~Ly~~~H~vHH~s~~p~~~---------ta~~~hplE~ll~~~l~~iPl~~~~-l~g~-----  201 (639)
                      +..|..+=.+|-+.|....+.|.|..||+...++--         +..|+.|.|.++..++-.+|..+.. ....     
T Consensus        17 ~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (406)
T PRK07424         17 LWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLA   96 (406)
T ss_pred             HHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchh
Confidence            344555555666666544556899999998876532         2458899997665443223322211 1000     


Q ss_pred             -hhHHHHHHHH---HHHHHHHhhcc-CCcee--ccccchhccCCcccccCChhhHHHhhcCCC-CCcCCCcchhhhhcCC
Q 006607          202 -ASIASFVGYI---IYVDFMNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGT  273 (639)
Q Consensus       202 -~~~~~i~~y~---~~~~~~~~~~H-sGye~--~P~~~~~~lp~L~~li~tp~~H~lHH~~~~-~NYG~~f~lWDrLFGT  273 (639)
                       .+......|.   +.... .+... ++-+.  .|..+.+  ++-.| +..+.||-.||-... .-||..+++.|+..||
T Consensus        97 ~~~~~~~~~~~~~~~~r~~-~~~~~~~~~d~~h~~~~~~~--~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~t  172 (406)
T PRK07424         97 WLGVLYTLTFLFGAIARGL-GLPNADELTDLTHLPGPFET--LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGT  172 (406)
T ss_pred             hhhhHHHHHHHHHHHHHhc-ccccccccccccCCCCcccC--CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCc
Confidence             0111111121   11111 11112 11111  1432222  12233 457899999998865 7889999999999999


Q ss_pred             CC
Q 006607          274 ID  275 (639)
Q Consensus       274 ~~  275 (639)
                      ..
T Consensus       173 a~  174 (406)
T PRK07424        173 AL  174 (406)
T ss_pred             cc
Confidence            64

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.73  E-value=0.0029  Score=70.27  Aligned_cols=152  Identities=18%  Similarity=0.237  Sum_probs=95.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE--c-
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV--G-  532 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv--g-  532 (639)
                      ...++|+++|+ |  .+|+.++++|...|. +|++  |+.++.+.++++++...    +...+.. . ..++++|.  | 
T Consensus       180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEA----IPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcE----eeHHHHHHHhccCCEEEECCCC
Confidence            35679999998 6  999999999999997 6777  88889888888865321    2222333 2 56677662  2 


Q ss_pred             --CcCChhhhhcC-----CCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHH
Q 006607          533 --DDLTGKEQARA-----PKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAG  600 (639)
Q Consensus       533 --~~~~~~~q~~a-----~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~  600 (639)
                        -.++.++.+.+     .++.+++|.+ +|+. +  +.  +++.+.      .=++++.  .++.....|.-.+-.|+.
T Consensus       253 ~~~~i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~------~vDdl~~--~~~~n~~~r~~~~~~a~~  323 (423)
T PRK00045        253 PHPIIGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLY------DVDDLQE--IVEENLAQRQEAAEKAEA  323 (423)
T ss_pred             CCcEEcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEE------EHHHHHH--HHHhhHHHHHHHHHHHHH
Confidence              24555555443     3567899998 6554 1  11  222211      1112221  244566778888899999


Q ss_pred             HHH----HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607          601 IIH----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  628 (639)
Q Consensus       601 ~v~----alEgw~~~-e~G~-i--v-~~i~~iw~aa~  628 (639)
                      ||-    .++.|... +... |  + +++++|-+.-+
T Consensus       324 ii~~~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el  360 (423)
T PRK00045        324 IVEEEVAEFMEWLRSLEVVPTIRALREQAEEIREEEL  360 (423)
T ss_pred             HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            986    67778655 6776 4  3 66666655443

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.64  E-value=0.012  Score=63.15  Aligned_cols=140  Identities=14%  Similarity=0.114  Sum_probs=88.4

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++-=-=|..+.+-.--++.+.-+|+ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   .+|+
T Consensus        64 ~g~K~~~~~p~n~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a~  140 (325)
T PRK08618         64 LGLKIVSVVPENKKKGKPTIPGTVILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQAK  140 (325)
T ss_pred             EEEEEEeecCCCcccCCCcceEEEEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHHH
Confidence            578887752222212222111234444544 46699999999985       3334555 5678899999998   7899


Q ss_pred             HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCC-hh-hhhcCCCCceeec
Q 006607          480 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-GK-EQARAPKGTIFIP  551 (639)
Q Consensus       480 ava~~L~-~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~~-~q~~a~~G~~f~~  551 (639)
                      +.+.+|+ .+++ +|.+  |++++.+++.+++..+.+.......++++  ++++++|....-. |. + .++++|++++.
T Consensus       141 ~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~  219 (325)
T PRK08618        141 GQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHINA  219 (325)
T ss_pred             HHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEEe
Confidence            9999887 4454 4455  99999999988765443333223445553  7788877433222 21 2 57799999987


Q ss_pred             c
Q 006607          552 Y  552 (639)
Q Consensus       552 ~  552 (639)
                      +
T Consensus       220 i  220 (325)
T PRK08618        220 V  220 (325)
T ss_pred             c
Confidence            7

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.56  E-value=0.0052  Score=65.07  Aligned_cols=154  Identities=21%  Similarity=0.223  Sum_probs=95.7

Q ss_pred             eecCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeee
Q 006607          444 VVDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLS  518 (639)
Q Consensus       444 vv~Gnsltaa~v~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~  518 (639)
                      =|||-.+.-+-.=+.++.+  .++|++.||-|   -+|||+..|.+.|+ ++++  |+.+|.++|++..++... . ++.
T Consensus       105 NTD~~G~~~~L~~~~~~~~~~~~~vlilGAGG---AarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~-~~~  179 (283)
T COG0169         105 NTDGIGFLRALKEFGLPVDVTGKRVLILGAGG---AARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A-VEA  179 (283)
T ss_pred             cCCHHHHHHHHHhcCCCcccCCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c-ccc
Confidence            3677777766665565554  48999999998   48999999999995 5777  999999999988665432 1 112


Q ss_pred             cc---cccc-ceeEEE----EcCcCCh----hhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCcc
Q 006607          519 TS---YAAH-KTKIWL----VGDDLTG----KEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSN  580 (639)
Q Consensus       519 ~~---~~~~-~~~vwi----vg~~~~~----~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~  580 (639)
                      ..   ++.. +.++.|    +|-.-.+    -+-.-.++++++.|+.=.|.+     ..| +=|.+.++..|-+-   |+
T Consensus       180 ~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~~idGl~Mlv~---Qa  256 (283)
T COG0169         180 AALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAKTIDGLGMLVH---QA  256 (283)
T ss_pred             ccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCeEECcHHHHHH---HH
Confidence            22   2223 467777    2221111    011235889999888855544     223 56778888777664   44


Q ss_pred             ccccccccCcchhhhHHHHHHHHHh
Q 006607          581 MHSCENWLGRRVMSAWRIAGIIHAL  605 (639)
Q Consensus       581 ~~~~e~~~pr~~~~Ac~a~~~v~al  605 (639)
                      ..++|-|.+.+--..=+-+.+..++
T Consensus       257 a~aF~lwtg~~p~~~~~~~a~~~~~  281 (283)
T COG0169         257 AEAFELWTGVEPPVDVMKEALIEAL  281 (283)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHh
Confidence            5556666655433333333443333

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.53  E-value=0.0048  Score=59.07  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=32.4

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      |+|+||||  .+|+.+++.|.++|.+|..  |++++.++
T Consensus         1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED   37 (183)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred             eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence            78999999  9999999999999999999  88887775

...

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.36  E-value=0.012  Score=55.17  Aligned_cols=123  Identities=15%  Similarity=0.140  Sum_probs=73.1

Q ss_pred             cCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607          446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  522 (639)
Q Consensus       446 ~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  522 (639)
                      ||-.+..|.--..+....++|.++|+ |  .+|+++|+.|++.| .+|.+  |+.++.+++.++..... .. ...++.+
T Consensus         2 d~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~   76 (155)
T cd01065           2 DGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IA-IAYLDLE   76 (155)
T ss_pred             CHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cc-eeecchh
Confidence            44444444443344455678999998 7  99999999999885 67777  88888888877754321 00 1122333


Q ss_pred             c--cceeEEEE--cCcC---Chh--hhhcCCCCceeecccccCCc-----CCC-CCceeecCCccc
Q 006607          523 A--HKTKIWLV--GDDL---TGK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMI  573 (639)
Q Consensus       523 ~--~~~~vwiv--g~~~---~~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~  573 (639)
                      +  .+++++|.  ....   ++.  ....+++|+.++|.+-+|+.     +.| ..+.+..+..|-
T Consensus        77 ~~~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~~l~~~~~~~g~~~v~g~~~~  142 (155)
T cd01065          77 ELLAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLETPLLKEARALGAKTIDGLEML  142 (155)
T ss_pred             hccccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCCHHHHHHHHCCCceeCCHHHH
Confidence            2  56667662  1111   111  11235788888888866652     233 456666555553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.23  E-value=0.023  Score=60.16  Aligned_cols=124  Identities=16%  Similarity=0.176  Sum_probs=76.8

Q ss_pred             HHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHH
Q 006607          405 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA  482 (639)
Q Consensus       405 ~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava  482 (639)
                      .|+++|++|+.+-..+.   +..       .|.    +.+   -..+.+.+++..+  -..++|.++|. |  .+|+++|
T Consensus       108 ~a~~~gi~v~~~~~~~~---va~-------~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA  167 (287)
T TIGR02853       108 LAADAGVKLIELFERDD---VAI-------YNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA  167 (287)
T ss_pred             HHHHCCCeEEEEEeccc---eEE-------Ecc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence            67888888887665331   211       110    000   1123334444432  24679999999 4  8999999


Q ss_pred             HHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc---CcCChhhhhcCCCCceeeccc
Q 006607          483 SSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---DDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       483 ~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +.|...|.+|++  |++++.++.++. ....    +...++++  +++++++.-   ..++.+...++++|++++|.+
T Consensus       168 ~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~----~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDla  240 (287)
T TIGR02853       168 RTFSALGARVFVGARSSADLARITEM-GLIP----FPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLA  240 (287)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHC-CCee----ecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeC
Confidence            999999999998  777766655432 1110    11223333  566776632   235677778899999999999

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.21  E-value=0.013  Score=67.48  Aligned_cols=59  Identities=19%  Similarity=0.363  Sum_probs=49.1

Q ss_pred             CChhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          447 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       447 Gnsltaa~v~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      |.+.....+.+.+|+     +.+.|+|+||+|  .||+++++.|+++|.+|.+  |+.++.+.+.+++
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l  124 (576)
T PLN03209         59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV  124 (576)
T ss_pred             cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence            566666777888875     456899999999  9999999999999999987  8888888776653

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.13  E-value=0.0072  Score=67.19  Aligned_cols=210  Identities=12%  Similarity=0.101  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEe
Q 006607          395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR  469 (639)
Q Consensus       395 in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~-----~~~~V~~~  469 (639)
                      |=.+|-+|...|.+.|.-=--|..+=+       ..+.+.|.-. =+.++-.|..=.+.++++-..+     ..++|+|+
T Consensus       116 IlgQVK~A~~~A~~~g~~g~~L~~lf~-------~A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi  187 (414)
T PRK13940        116 ILGQVKDSYTLSKKNHAIGKELDRVFQ-------KVFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII  187 (414)
T ss_pred             HHHHHHHHHHHHHHcCCchHHHHHHHH-------HHHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence            334488888888888753221211111       1223334422 2355555555455555554433     45789999


Q ss_pred             cccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-----cCChhh
Q 006607          470 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKE  539 (639)
Q Consensus       470 Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~  539 (639)
                      |+ |  ++|+++|.+|+.+|+ ++++  |+.++-++|.++.+...   .+....+.+  .+++++|...     .++.++
T Consensus       188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~---~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~  261 (414)
T PRK13940        188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS---AHYLSELPQLIKKADIIIAAVNVLEYIVTCKY  261 (414)
T ss_pred             cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe---EecHHHHHHHhccCCEEEECcCCCCeeECHHH
Confidence            99 5  899999999999986 5666  88899999988865211   111223332  6677777322     245544


Q ss_pred             hhcCCCCceeecccccCCc-C--CC--CCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH----HhcCCCC
Q 006607          540 QARAPKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDL  610 (639)
Q Consensus       540 q~~a~~G~~f~~~~~~~~~-~--~R--~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~----alEgw~~  610 (639)
                      .+  .+...++|.+ +|+. +  +.  +++.+..--      +++.  .++-.+..|...+=.|+.||-    .++.|..
T Consensus       262 ~~--~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iD------dl~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~  330 (414)
T PRK13940        262 VG--DKPRVFIDIS-IPQALDPKLGELEQNVYYCVD------DINA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEK  330 (414)
T ss_pred             hC--CCCeEEEEeC-CCCCCCccccCcCCeEEEeHH------HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            32  3467999999 7766 2  21  222222111      1221  133345567766667777765    6777865


Q ss_pred             C-ccch-h--h-hhHHHHHHHHHh
Q 006607          611 N-ECGQ-T--M-CDIHQVWHASLR  629 (639)
Q Consensus       611 ~-e~G~-i--v-~~i~~iw~aa~k  629 (639)
                      . ++.+ |  + ++.++|-+..++
T Consensus       331 ~~~~~p~I~~lr~~~~~i~~~el~  354 (414)
T PRK13940        331 AIISNSAIKELFQKADGLVDLSLE  354 (414)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHH
Confidence            5 6776 5  4 777777554443

>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]

Probab=96.10  E-value=0.017  Score=61.40  Aligned_cols=151  Identities=17%  Similarity=0.191  Sum_probs=109.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCcCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLT  536 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~  536 (639)
                      -+.++++|-.   ++|..||.+|--.|-+|.+..-|..-.||... +++     +++++++  +..+|.|    --|+|.
T Consensus       214 GKv~Vv~GYG---dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaM-eG~-----~V~tm~ea~~e~difVTtTGc~dii~  284 (434)
T KOG1370|consen  214 GKVAVVCGYG---DVGKGCAQALKGFGARVIVTEIDPICALQAAM-EGY-----EVTTLEEAIREVDIFVTTTGCKDIIT  284 (434)
T ss_pred             ccEEEEeccC---ccchhHHHHHhhcCcEEEEeccCchHHHHHHh-hcc-----EeeeHHHhhhcCCEEEEccCCcchhh
Confidence            4556666654   99999999999999999997778888887763 232     4777774  7777777    347889


Q ss_pred             hhhhhcCCCCceeecccccCCc----CCCCC-------------ceeecCCcccc--CCCCccccccccccCcchhhhHH
Q 006607          537 GKEQARAPKGTIFIPYTQIPPR----KLRKD-------------CFYHSTPAMII--PPSLSNMHSCENWLGRRVMSAWR  597 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~----~~R~d-------------c~y~~~~a~~~--P~~~~~~~~~e~~~pr~~~~Ac~  597 (639)
                      .+...++|.++++|-.-.|+-+    -+|.+             ...+++-.+.+  -+-+-|+. |-.+.|.=+||-.+
T Consensus       285 ~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sf  363 (434)
T KOG1370|consen  285 GEHFDQMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSF  363 (434)
T ss_pred             HHHHHhCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecch
Confidence            9999999999999988775543    22211             11222222221  12367787 99999999999999


Q ss_pred             HHHHHHHhcCCCCCc----cch-h-hhhHHHH
Q 006607          598 IAGIIHALEGWDLNE----CGQ-T-MCDIHQV  623 (639)
Q Consensus       598 a~~~v~alEgw~~~e----~G~-i-v~~i~~i  623 (639)
                      .--++.-+|=|++.+    .|- + ..++|+-
T Consensus       364 tnQvlAqIeLwt~p~~kY~~~V~~LPKklDE~  395 (434)
T KOG1370|consen  364 TNQVLAQIELWTAPEGKYKVGVYVLPKKLDEY  395 (434)
T ss_pred             HHHHHHHHHHhcCCCCccccceEecchhhHHH
Confidence            999999999999985    343 2 3778764

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=96.03  E-value=0.029  Score=60.03  Aligned_cols=140  Identities=18%  Similarity=0.101  Sum_probs=85.6

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      -.|+|+++.--=|....+..--++.+.-+|+ +.-+-+.||+.+|+       |++.+-+ |++.+.+.++|+-   ..|
T Consensus        64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA  140 (313)
T PF02423_consen   64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA  140 (313)
T ss_dssp             EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred             EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence            4688888854444433343333444454544 35588999999984       3333333 6678899999987   999


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cC---cCChhhhhcCCC
Q 006607          479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD---DLTGKEQARAPK  545 (639)
Q Consensus       479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~---~~~~~~q~~a~~  545 (639)
                      +.-+++|+  +.-.+|.+  |++++.+++.+++.. .+.....+.+.++  ++++|++.    .+   .++.+   |.+|
T Consensus       141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~---~l~~  216 (313)
T PF02423_consen  141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAE---WLKP  216 (313)
T ss_dssp             HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GG---GS-T
T ss_pred             HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHH---HcCC
Confidence            99999998  55455555  999999999999776 4445345556764  88888772    22   34444   5599


Q ss_pred             Cceeecccc
Q 006607          546 GTIFIPYTQ  554 (639)
Q Consensus       546 G~~f~~~~~  554 (639)
                      |+++..+.-
T Consensus       217 g~hi~~iGs  225 (313)
T PF02423_consen  217 GTHINAIGS  225 (313)
T ss_dssp             T-EEEE-S-
T ss_pred             CcEEEEecC
Confidence            999988875

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=96.01  E-value=0.036  Score=59.10  Aligned_cols=132  Identities=13%  Similarity=0.045  Sum_probs=89.7

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcCcCCCcEEEEecccCchhhHHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA  480 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i~~~~~~V~~~Gatg~~kig~a  480 (639)
                      .|+|+++-+   .    |+-.++.+.-+|+ +.-..+.||+.+|+       |++.+-..++.+.+.++|+-   ..|+.
T Consensus        62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~  131 (301)
T PRK06407         62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET  131 (301)
T ss_pred             eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence            577776642   1    2222344555554 45589999999986       45556567788999999987   89999


Q ss_pred             HHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCc-CChhhhhcCCCCcee
Q 006607          481 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDD-LTGKEQARAPKGTIF  549 (639)
Q Consensus       481 va~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~-~~~~~q~~a~~G~~f  549 (639)
                      -++++|  +.-.+|.+  |++++.+++.+++....+....-+.+.++  ++++|++    ..+. ++.+   |.+||+|+
T Consensus       132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~---~l~pg~hV  208 (301)
T PRK06407        132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRK---YLGDEYHV  208 (301)
T ss_pred             HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHH---HcCCCceE
Confidence            999999  55556666  99999999988876544334223445654  8888877    2222 3344   44789998


Q ss_pred             eccc
Q 006607          550 IPYT  553 (639)
Q Consensus       550 ~~~~  553 (639)
                      ..+-
T Consensus       209 ~aiG  212 (301)
T PRK06407        209 NLAG  212 (301)
T ss_pred             EecC
Confidence            8874

>PRK09186 flagellin modification protein A; Provisional

Probab=96.01  E-value=0.014  Score=58.58  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   49 (256)
T PRK09186          4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLG   49 (256)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888887776653

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.98  E-value=0.065  Score=57.69  Aligned_cols=140  Identities=17%  Similarity=0.153  Sum_probs=90.5

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      -.|+|+++.--=|....|..-.++.+.-+|+ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+-   ..|
T Consensus        64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA  140 (325)
T TIGR02371        64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA  140 (325)
T ss_pred             eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence            4688888753333323333334445555555 45699999999985       2333445 5688899999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-c---Cc-CChhhhhcCCCCc
Q 006607          479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-G---DD-LTGKEQARAPKGT  547 (639)
Q Consensus       479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-g---~~-~~~~~q~~a~~G~  547 (639)
                      ++-+++|+  ++..+|.+  |++++.+.+.+++.+ .+.....+.+.++  ++++|++. -   +. ++++   +.+||+
T Consensus       141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~---~l~~g~  216 (325)
T TIGR02371       141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKAD---WVSEGT  216 (325)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHH---HcCCCC
Confidence            99888877  66677777  999999998887642 2222122335553  77877662 1   22 2333   459999


Q ss_pred             eeecccc
Q 006607          548 IFIPYTQ  554 (639)
Q Consensus       548 ~f~~~~~  554 (639)
                      +++.+..
T Consensus       217 ~v~~vGs  223 (325)
T TIGR02371       217 HINAIGA  223 (325)
T ss_pred             EEEecCC
Confidence            9998863

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.97  E-value=0.051  Score=57.93  Aligned_cols=139  Identities=12%  Similarity=0.091  Sum_probs=90.8

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      -.|+|+++.--=|..+.|..--++.+.-+|+ +.-.-+.||+.+|+       |++.+-+ +++.++|.++|+-   ..|
T Consensus        61 ~~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa  137 (304)
T PRK07340         61 LAITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQA  137 (304)
T ss_pred             ccEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence            3588887743333323333333445555555 45599999999985       3444555 5688899999995   899


Q ss_pred             HHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE----EcCcCChhhhhcCCCCce
Q 006607          479 NAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL----VGDDLTGKEQARAPKGTI  548 (639)
Q Consensus       479 ~ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi----vg~~~~~~~q~~a~~G~~  548 (639)
                      ++.++++|. ++ .++.+  |++++.+++.+++... ... +...+.++  ++++|++    ..+.+=++   +.+||+|
T Consensus       138 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~-~~~~~~~~av~~aDiVitaT~s~~Pl~~~---~~~~g~h  212 (304)
T PRK07340        138 RAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPT-AEPLDGEAIPEAVDLVVTATTSRTPVYPE---AARAGRL  212 (304)
T ss_pred             HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCe-eEECCHHHHhhcCCEEEEccCCCCceeCc---cCCCCCE
Confidence            999999983 55 45666  9999999998887532 112 12345553  7788877    22222222   3489999


Q ss_pred             eecccc
Q 006607          549 FIPYTQ  554 (639)
Q Consensus       549 f~~~~~  554 (639)
                      +..+.-
T Consensus       213 i~~iGs  218 (304)
T PRK07340        213 VVAVGA  218 (304)
T ss_pred             EEecCC
Confidence            998873

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.95  E-value=0.013  Score=61.70  Aligned_cols=61  Identities=16%  Similarity=0.102  Sum_probs=43.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  542 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~  542 (639)
                      +|+|+||||  -||+.+++.|.++|.+|..  |+.++...++..                  + ..++.||..++++...
T Consensus         2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~------------------~-v~~v~~Dl~d~~~l~~   60 (317)
T CHL00194          2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW------------------G-AELVYGDLSLPETLPP   60 (317)
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc------------------C-CEEEECCCCCHHHHHH
Confidence            699999999  9999999999999999887  665554333211                  1 1245667666666666


Q ss_pred             CCCC
Q 006607          543 APKG  546 (639)
Q Consensus       543 a~~G  546 (639)
                      |-+|
T Consensus        61 al~g   64 (317)
T CHL00194         61 SFKG   64 (317)
T ss_pred             HHCC
Confidence            5555

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.016  Score=58.32  Aligned_cols=46  Identities=22%  Similarity=0.255  Sum_probs=40.3

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +...+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus         6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l   53 (258)
T PRK06949          6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEI   53 (258)
T ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            34567899999998  9999999999999999988  8888888887764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.87  E-value=0.021  Score=60.33  Aligned_cols=62  Identities=16%  Similarity=0.190  Sum_probs=44.1

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhhCCc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIPV  509 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~---~~~~~l~~~~~~  509 (639)
                      |||.-...+.--.......+.|+++|| |  -+|+|+|..|++.|.+ |.+  |+.   ++.+++.+++..
T Consensus       108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~  175 (289)
T PRK12548        108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ  175 (289)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh
Confidence            555555554432233334578999999 5  7999999999999987 877  765   677777776643

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.87  E-value=0.024  Score=55.62  Aligned_cols=85  Identities=15%  Similarity=0.142  Sum_probs=56.2

Q ss_pred             hhHHHHHHhcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccccc
Q 006607          449 SLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH  524 (639)
Q Consensus       449 sltaa~v~~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~  524 (639)
                      +.++.-.++++..  ..++|+|+|+..  -+|..+|.+|.++|.+|++  |+.+   ++++.+                +
T Consensus        28 ~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~~---~l~~~l----------------~   86 (168)
T cd01080          28 PAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKTK---NLKEHT----------------K   86 (168)
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCch---hHHHHH----------------h
Confidence            3444445555543  679999999973  4699999999999999888  4322   222211                2


Q ss_pred             ceeEEE----EcCcCChhhhhcCCCCceeecccccCCc
Q 006607          525 KTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       525 ~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      +++++|    ..+.+++++.   ++|++++|++ +|+.
T Consensus        87 ~aDiVIsat~~~~ii~~~~~---~~~~viIDla-~prd  120 (168)
T cd01080          87 QADIVIVAVGKPGLVKGDMV---KPGAVVIDVG-INRV  120 (168)
T ss_pred             hCCEEEEcCCCCceecHHHc---cCCeEEEEcc-CCCc
Confidence            344444    1135666654   7899999999 7774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.81  E-value=0.021  Score=55.82  Aligned_cols=88  Identities=20%  Similarity=0.279  Sum_probs=61.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--Ec--CcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VG--DDL  535 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg--~~~  535 (639)
                      .-++|+|+|--   ++|+.||+.|...|.+|++...|....+|... .++     ++.+++ + .+++++|  -|  +.|
T Consensus        22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf-----~v~~~~~a~~~adi~vtaTG~~~vi   92 (162)
T PF00670_consen   22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGF-----EVMTLEEALRDADIFVTATGNKDVI   92 (162)
T ss_dssp             TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT------EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred             CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCc-----EecCHHHHHhhCCEEEECCCCcccc
Confidence            56789999987   99999999999999999996667777776653 333     244554 3 6667766  34  468


Q ss_pred             ChhhhhcCCCCceeecccccCCc
Q 006607          536 TGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       536 ~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      +.|+...+|.|++++....++-+
T Consensus        93 ~~e~~~~mkdgail~n~Gh~d~E  115 (162)
T PF00670_consen   93 TGEHFRQMKDGAILANAGHFDVE  115 (162)
T ss_dssp             -HHHHHHS-TTEEEEESSSSTTS
T ss_pred             CHHHHHHhcCCeEEeccCcCcee
Confidence            99999999999999998876655

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.021  Score=58.38  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=38.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.++++++.+
T Consensus         3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~   47 (276)
T PRK06482          3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARYG   47 (276)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc
Confidence            5799999998  9999999999999999988  88888888877654

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.018  Score=58.20  Aligned_cols=45  Identities=29%  Similarity=0.320  Sum_probs=39.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   54 (253)
T PRK05867          8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIG   54 (253)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            457899999997  9999999999999999998  88888888877654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.77  E-value=0.017  Score=61.60  Aligned_cols=146  Identities=15%  Similarity=0.172  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcC-----CCcEEEEecc
Q 006607          397 SLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLRGT  471 (639)
Q Consensus       397 ~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~-----~~~~V~~~Ga  471 (639)
                      .++.+|...|++.|.-=--|..+=+       .-+.+.|.-. -+..+-.|..=++..+++...+     ..++|+++|+
T Consensus       115 gQvk~A~~~a~~~g~~~~~L~~lf~-------~a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa  186 (311)
T cd05213         115 GQVKNAYKLAKEAGTSGKLLNRLFQ-------KAIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA  186 (311)
T ss_pred             HHHHHHHHHHHHcCCchHHHHHHHH-------HHHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc
Confidence            4488999999988762111111111       0112222211 2244444443333334444433     4788999998


Q ss_pred             cCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCC-h----hhhh
Q 006607          472 VTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT-G----KEQA  541 (639)
Q Consensus       472 tg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~-~----~~q~  541 (639)
                       |  .+|+.+++.|+++| .+|++  |+.++.++++++++...    +...++++  ..++++|.-..-. +    ++..
T Consensus       187 -G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~~~~~l~~aDvVi~at~~~~~~~~~~~~~  259 (311)
T cd05213         187 -G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNA----VPLDELLELLNEADVVISATGAPHYAKIVERAM  259 (311)
T ss_pred             -H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeE----EeHHHHHHHHhcCCEEEECCCCCchHHHHHHHH
Confidence             6  99999999999766 56666  88899999988876421    12223332  5677777322211 1    1111


Q ss_pred             -cC-CCCceeecccccCCc
Q 006607          542 -RA-PKGTIFIPYTQIPPR  558 (639)
Q Consensus       542 -~a-~~G~~f~~~~~~~~~  558 (639)
                       .. .+|.+++|.+ +|+.
T Consensus       260 ~~~~~~~~~viDla-vPrd  277 (311)
T cd05213         260 KKRSGKPRLIVDLA-VPRD  277 (311)
T ss_pred             hhCCCCCeEEEEeC-CCCC
Confidence             11 2578899998 6655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.75  E-value=0.03  Score=59.47  Aligned_cols=87  Identities=17%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--c-Cc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G-DD  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g-~~  534 (639)
                      ..++|+++|+ |  .+|++++..|.+.|.+|++  |+.++.+..++ .+...    +...++++  ++++++|.  . ..
T Consensus       151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~----~~~~~l~~~l~~aDiVI~t~p~~~  222 (296)
T PRK08306        151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSP----FHLSELAEEVGKIDIIFNTIPALV  222 (296)
T ss_pred             CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCee----ecHHHHHHHhCCCCEEEECCChhh
Confidence            4689999997 5  8999999999999999998  66666554432 22211    11223332  56677662  2 23


Q ss_pred             CChhhhhcCCCCceeecccccCC
Q 006607          535 LTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ++.+....+++|++++|++ ..|
T Consensus       223 i~~~~l~~~~~g~vIIDla-~~p  244 (296)
T PRK08306        223 LTKEVLSKMPPEALIIDLA-SKP  244 (296)
T ss_pred             hhHHHHHcCCCCcEEEEEc-cCC
Confidence            6677778899999999999 444

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.017  Score=59.27  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=39.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (263)
T PRK08339          8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS   54 (263)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999998  888888888776543

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.024  Score=57.76  Aligned_cols=44  Identities=25%  Similarity=0.307  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (261)
T PRK08265          6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG   51 (261)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999998  88888888877763

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.71  E-value=0.019  Score=57.39  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=35.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus         5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~   49 (250)
T PRK08063          5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI   49 (250)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999765   7777777666654

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.68  E-value=0.077  Score=56.76  Aligned_cols=139  Identities=21%  Similarity=0.190  Sum_probs=86.6

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      -.|+|+++---=|....+-.--++.+.-+++ +.-+-+.||+.+|+       |++.+-+ +++.++|.++|+ |  ..|
T Consensus        61 ~~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a  137 (314)
T PRK06141         61 YIGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLA  137 (314)
T ss_pred             eeEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHH
Confidence            3588888843323222232222345555554 45599999999984       2333333 567889999996 5  999


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEE----cCc-CChhhhhcCCCCc
Q 006607          479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLV----GDD-LTGKEQARAPKGT  547 (639)
Q Consensus       479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwiv----g~~-~~~~~q~~a~~G~  547 (639)
                      +.++++++  +...+|.+  |++++.+++.+++... +....-..+.+ + ++++|++.    .+. ++.   .+.++|+
T Consensus       138 ~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~-g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~---~~l~~g~  213 (314)
T PRK06141        138 SLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ-GFDAEVVTDLEAAVRQADIISCATLSTEPLVRG---EWLKPGT  213 (314)
T ss_pred             HHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEeCCHHHHHhcCCEEEEeeCCCCCEecH---HHcCCCC
Confidence            99999888  34467777  9999999998886432 11211223455 3 67777662    111 222   3568999


Q ss_pred             eeeccc
Q 006607          548 IFIPYT  553 (639)
Q Consensus       548 ~f~~~~  553 (639)
                      ++..+.
T Consensus       214 ~i~~ig  219 (314)
T PRK06141        214 HLDLVG  219 (314)
T ss_pred             EEEeeC
Confidence            766554

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.66  E-value=0.048  Score=62.38  Aligned_cols=146  Identities=19%  Similarity=0.244  Sum_probs=90.3

Q ss_pred             EEEeecccCcccceeEEeeccCcccccchhhHHHHHHHHHHHHHHHHcCCc--EEEecccccc------cccccCCceee
Q 006607          362 FVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIEEAILEADAKGVK--VISLGLLNQG------EELNRNGEIYL  433 (639)
Q Consensus       362 f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~I~~Ai~~A~~~G~k--v~~LG~ln~~------e~ln~~g~~~~  433 (639)
                      |+=+.-.+.+.+.+-  +|-+|.              ++ -...+++.+++  +++...+++.      +.+|..| +.+
T Consensus       146 fiDdd~~~~g~~i~G--v~V~g~--------------~~-i~~~v~~~~~~~iiiAips~~~~~~~~i~~~l~~~~-~~v  207 (588)
T COG1086         146 FLDDDPDLTGMKIRG--VPVLGR--------------IE-IERVVEELGIQLILIAIPSASQEERRRILLRLARTG-IAV  207 (588)
T ss_pred             EECCChhhcCCEEec--eeeech--------------hH-HHHHHHHcCCceEEEecCCCCHHHHHHHHHHHHhcC-CcE
Confidence            444444444444443  666664              44 44456777777  6666666665      5677777 566


Q ss_pred             ecCCCCcceeeecCChhHHHHHHhcCcC--------------------CCcEEEEecccCchhhHHHHHHHHhccCcEEE
Q 006607          434 ERQPNKLKIKVVDGSSLAAAVVVNSLPK--------------------TTAHVLLRGTVTANKVANAVASSLCQMGIKVA  493 (639)
Q Consensus       434 ~k~p~~L~irvv~Gnsltaa~v~~~i~~--------------------~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~  493 (639)
                      ..-|+ +.. +++     .+.-+++|.-                    +.+.|+++||+|  +||+.+|+-+++.+.+.+
T Consensus       208 ~~lP~-~~~-l~~-----~~~~lreI~ieDLLgR~pV~~d~~~i~~~~~gK~vLVTGagG--SiGsel~~qil~~~p~~i  278 (588)
T COG1086         208 RILPQ-LTD-LKD-----LNGQLREIEIEDLLGRPPVALDTELIGAMLTGKTVLVTGGGG--SIGSELCRQILKFNPKEI  278 (588)
T ss_pred             EecCc-HHH-HHH-----hccccccCCHHHHhCCCCCCCCHHHHHhHcCCCEEEEeCCCC--cHHHHHHHHHHhcCCCEE
Confidence            66666 431 111     1111344421                    478999999999  999999999997777766


Q ss_pred             e---cchhhHHHHHhhCCcccccceeeecccccccee-EEEEcCcCChhhhhcCCCC
Q 006607          494 T---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQARAPKG  546 (639)
Q Consensus       494 ~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~~a~~G  546 (639)
                      +   +++-....+++++.+..+ +           .| .-+.||.-|.+-...|-.|
T Consensus       279 ~l~~~~E~~~~~i~~el~~~~~-~-----------~~~~~~igdVrD~~~~~~~~~~  323 (588)
T COG1086         279 ILFSRDEYKLYLIDMELREKFP-E-----------LKLRFYIGDVRDRDRVERAMEG  323 (588)
T ss_pred             EEecCchHHHHHHHHHHHhhCC-C-----------cceEEEecccccHHHHHHHHhc
Confidence            6   777777777777665442 1           22 2456777777666555444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.66  E-value=0.026  Score=59.65  Aligned_cols=127  Identities=15%  Similarity=0.102  Sum_probs=73.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCccccc-ceeeecc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQH-NLVLSTS  520 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~-~l~~~~~  520 (639)
                      |||-....+.--+......++|++.|+-   -.|+|+|..|++.|+ ++++  |+.+|.++|.+++...... ......+
T Consensus       109 TD~~G~~~~l~~~~~~~~~k~vlIlGaG---Gaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~  185 (284)
T PRK12549        109 TDWSGFAESFRRGLPDASLERVVQLGAG---GAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD  185 (284)
T ss_pred             CCHHHHHHHHHhhccCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc
Confidence            5565555544322122345789999997   589999999999998 6777  8999999998876433211 1111112


Q ss_pred             cc-c-cceeEEE----EcCcC---ChhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607          521 YA-A-HKTKIWL----VGDDL---TGKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       521 ~~-~-~~~~vwi----vg~~~---~~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  574 (639)
                      +. + ++++++|    +|-.-   .|-+....+++..+.|++--|+.     .-| +-|....+..|-+
T Consensus       186 ~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~~~G~~~~~G~~ML~  254 (284)
T PRK12549        186 LAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETELLRAARALGCRTLDGGGMAV  254 (284)
T ss_pred             hHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCHHHHHHHHCCCeEecCHHHHH
Confidence            22 2 5677877    33110   11122345677777777733322     112 4566666666643

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.024  Score=56.63  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=37.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  .||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (241)
T PRK07454          6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAEL   50 (241)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888777776654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.55  E-value=0.028  Score=56.76  Aligned_cols=45  Identities=20%  Similarity=0.213  Sum_probs=38.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  .||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~   55 (255)
T PRK07523          9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK   55 (255)
T ss_pred             CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  88887777766653

>PRK06196 oxidoreductase; Provisional

Probab=95.54  E-value=0.024  Score=59.64  Aligned_cols=56  Identities=16%  Similarity=0.126  Sum_probs=45.8

Q ss_pred             HHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       451 taa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ++..+++.++...+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~   71 (315)
T PRK06196         14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGID   71 (315)
T ss_pred             cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence            35555666665567899999998  9999999999999999998  88888887766653

>PRK06823 ornithine cyclodeaminase; Validated

Probab=95.50  E-value=0.12  Score=55.49  Aligned_cols=139  Identities=17%  Similarity=0.084  Sum_probs=88.9

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-Ccceeee-cCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv-~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      .|+|+++.--=|....+-.--++.+.-+|+ +.-+.+. ||+.+|+       |+..+-+ +++.+++.++|+-   ..|
T Consensus        64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA  140 (315)
T PRK06823         64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA  140 (315)
T ss_pred             EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence            567777643333322232223334444555 3446675 9999975       3334444 6788999999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cCc-CChhhhhcCCCCc
Q 006607          479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGT  547 (639)
Q Consensus       479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~  547 (639)
                      +.-++++|  +.-.+|.+  |++++-+++++++.+. +....-+.+.++  ++++|++.    .+. ++.+   |.+||+
T Consensus       141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~---~l~~G~  216 (315)
T PRK06823        141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAE---DIQPGT  216 (315)
T ss_pred             HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHH---HcCCCc
Confidence            99999999  66677777  9999999988776432 233222335654  78888772    122 3333   458999


Q ss_pred             eeecccc
Q 006607          548 IFIPYTQ  554 (639)
Q Consensus       548 ~f~~~~~  554 (639)
                      ++..+.-
T Consensus       217 hi~~iGs  223 (315)
T PRK06823        217 HITAVGA  223 (315)
T ss_pred             EEEecCC
Confidence            9998863

>PRK06046 alanine dehydrogenase; Validated

Probab=95.47  E-value=0.11  Score=55.87  Aligned_cols=141  Identities=16%  Similarity=0.196  Sum_probs=88.5

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      ..|+|+++.--=|..+.+..-.++.+.-+++ +.-..+.||+.+|+       |++.+-+ +++.+.|.++|+-   ..|
T Consensus        65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa  141 (326)
T PRK06046         65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA  141 (326)
T ss_pred             eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence            4678888754334333333322345555544 45589999999985       2333555 6788899999987   789


Q ss_pred             HHHHHHHh-ccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEEcC-----cCChhhhhcCCCCce
Q 006607          479 NAVASSLC-QMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGD-----DLTGKEQARAPKGTI  548 (639)
Q Consensus       479 ~ava~~L~-~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~-----~~~~~~q~~a~~G~~  548 (639)
                      ++.++.|+ .++++...   |++++.+++++++.+..........++++ ..+++++.-.     .++.+   +.++|+|
T Consensus       142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~---~l~~g~h  218 (326)
T PRK06046        142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAE---WIKEGTH  218 (326)
T ss_pred             HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHH---HcCCCCE
Confidence            99999998 44555544   89999999888865433322112335554 2277755211     12232   4589999


Q ss_pred             eecccc
Q 006607          549 FIPYTQ  554 (639)
Q Consensus       549 f~~~~~  554 (639)
                      +..+.-
T Consensus       219 V~~iGs  224 (326)
T PRK06046        219 INAIGA  224 (326)
T ss_pred             EEecCC
Confidence            988863

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.031  Score=56.08  Aligned_cols=41  Identities=24%  Similarity=0.372  Sum_probs=33.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~  506 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++ ++++++.++
T Consensus         2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   45 (251)
T PRK06924          2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ   45 (251)
T ss_pred             cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence            4799999998  9999999999999999988  655 556655443

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.029  Score=56.53  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (254)
T PRK07478          6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR   51 (254)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  88888888877653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.38  E-value=0.031  Score=55.95  Aligned_cols=42  Identities=17%  Similarity=0.249  Sum_probs=37.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  .||+++|+.|.++|.+|.+  |++++.+++++++
T Consensus         5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~   48 (258)
T PRK12429          5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEAL   48 (258)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            6899999998  9999999999999999988  8888888777664

>PRK07589 ornithine cyclodeaminase; Validated

Probab=95.35  E-value=0.11  Score=56.67  Aligned_cols=139  Identities=14%  Similarity=0.005  Sum_probs=91.6

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig  478 (639)
                      -.|+|+++.=-=|....+-.--++.+.-+|+ +.-+-+.||+.+|+       |+..+-+ +++.+.+.++|+-   ..|
T Consensus        65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA  141 (346)
T PRK07589         65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS  141 (346)
T ss_pred             ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence            3678877643324333343333444455544 45589999999984       3344555 6788899999987   899


Q ss_pred             HHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-------cCChhhhhcCCC
Q 006607          479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-------DLTGKEQARAPK  545 (639)
Q Consensus       479 ~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-------~~~~~~q~~a~~  545 (639)
                      +.-++++|  +.-.+|.+  |++++.+++.+++... +.+..-+.+.++  ++++|++-=.       .++.   +|.++
T Consensus       142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~---~~lkp  217 (346)
T PRK07589        142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTD---DMVEP  217 (346)
T ss_pred             HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecH---HHcCC
Confidence            99998888  66667777  9999999998887542 223223345664  7888877311       1233   35699


Q ss_pred             Cceeeccc
Q 006607          546 GTIFIPYT  553 (639)
Q Consensus       546 G~~f~~~~  553 (639)
                      |+|+..+-
T Consensus       218 G~hV~aIG  225 (346)
T PRK07589        218 GMHINAVG  225 (346)
T ss_pred             CcEEEecC
Confidence            99988764

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.33  E-value=0.0097  Score=57.29  Aligned_cols=102  Identities=24%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--E------
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V------  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v------  531 (639)
                      ++|-++|--   .+|+++|+.|.+.|.+|..  |++++.++++++- .      ....+.++  +.+++++  +      
T Consensus         2 ~~Ig~IGlG---~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-~------~~~~s~~e~~~~~dvvi~~v~~~~~v   71 (163)
T PF03446_consen    2 MKIGFIGLG---NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-A------EVADSPAEAAEQADVVILCVPDDDAV   71 (163)
T ss_dssp             BEEEEE--S---HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-E------EEESSHHHHHHHBSEEEE-SSSHHHH
T ss_pred             CEEEEEchH---HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-h------hhhhhhhhHhhcccceEeecccchhh
Confidence            478899984   9999999999999999999  8899999988772 1      11334443  5565544  2      


Q ss_pred             cCcCChhh-hhcCCCCceeecccccCCc-------CCC-CCceeecCCccccC
Q 006607          532 GDDLTGKE-QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP  575 (639)
Q Consensus       532 g~~~~~~~-q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P  575 (639)
                      .+.+..++ ...+++|+++++.+-.+|+       +++ +.+.|.+.|.+-=|
T Consensus        72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~  124 (163)
T PF03446_consen   72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGP  124 (163)
T ss_dssp             HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHH
T ss_pred             hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeeccc
Confidence            12222211 2346899999999998887       222 67889888876544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.036  Score=55.00  Aligned_cols=45  Identities=22%  Similarity=0.240  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  .||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus         6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~   52 (237)
T PRK07326          6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN   52 (237)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence            36799999998  9999999999999999988  888888877776543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.28  E-value=0.032  Score=55.81  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=36.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   45 (255)
T TIGR01963         2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA   45 (255)
T ss_pred             CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4699999998  9999999999999999988  8888887777654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.28  E-value=0.091  Score=57.60  Aligned_cols=92  Identities=14%  Similarity=0.169  Sum_probs=65.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----cC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GD  533 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~  533 (639)
                      .++|+|+|+ |  .+|+.+|+.|.+.|.+|.+  ++.++.+.++++.+........+...+++  +.++++|-     |+
T Consensus       167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            355999999 6  9999999999999999888  78888888877654321100001112332  56677663     32


Q ss_pred             ----cCChhhhhcCCCCceeecccccCCc
Q 006607          534 ----DLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       534 ----~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                          .++.+..+.+++|.+++|++ +++-
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva-~d~G  271 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQG  271 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEe-cCCC
Confidence                26888999999999999999 7776

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.039  Score=55.84  Aligned_cols=43  Identities=16%  Similarity=0.299  Sum_probs=38.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   46 (260)
T PRK08267          2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG   46 (260)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999998  88998888877765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.26  E-value=0.041  Score=55.60  Aligned_cols=44  Identities=25%  Similarity=0.258  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~   51 (257)
T PRK07067          6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG   51 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence            46799999998  9999999999999999988  88888888877654

>PRK08643 acetoin reductase; Validated

Probab=95.25  E-value=0.035  Score=55.94  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=37.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus         3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   47 (256)
T PRK08643          3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS   47 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888877653

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.033  Score=56.03  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (258)
T PRK07890          5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID   50 (258)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            36799999998  9999999999999999998  88888887776653

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.037  Score=59.27  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=39.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~   53 (334)
T PRK07109          7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR   53 (334)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877753

>PRK06194 hypothetical protein; Provisional

Probab=95.19  E-value=0.036  Score=56.95  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=37.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++.+++.
T Consensus         7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (287)
T PRK06194          7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR   51 (287)
T ss_pred             CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  77777777766643

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.19  E-value=0.023  Score=60.56  Aligned_cols=45  Identities=16%  Similarity=0.248  Sum_probs=40.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++||+|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (320)
T PLN02780         53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS   99 (320)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence            35789999997  9999999999999999998  999999998887643

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.18  E-value=0.044  Score=55.67  Aligned_cols=44  Identities=18%  Similarity=0.279  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++.+++.++++
T Consensus         6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (263)
T PRK06200          6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG   51 (263)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            35799999997  9999999999999999988  88889998887764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.18  E-value=0.084  Score=59.70  Aligned_cols=141  Identities=18%  Similarity=0.184  Sum_probs=93.3

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  532 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  532 (639)
                      .-..++|.|+|.-   .||+++|+.|...|.+|+.  ++..+.  ++... .+.     +..++++  +.+++++  .| 
T Consensus       251 ~LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a--~~A~~-~G~-----~~~~leell~~ADIVI~atGt  319 (476)
T PTZ00075        251 MIAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICA--LQAAM-EGY-----QVVTLEDVVETADIFVTATGN  319 (476)
T ss_pred             CcCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHh-cCc-----eeccHHHHHhcCCEEEECCCc
Confidence            3357789999976   8999999999999999988  343332  22111 111     1234443  5667766  23 


Q ss_pred             -CcCChhhhhcCCCCceeecccccCCc----CCC--CC--ceee--cCCccccCC----------CCccccccccccCcc
Q 006607          533 -DDLTGKEQARAPKGTIFIPYTQIPPR----KLR--KD--CFYH--STPAMIIPP----------SLSNMHSCENWLGRR  591 (639)
Q Consensus       533 -~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--~d--c~y~--~~~a~~~P~----------~~~~~~~~e~~~pr~  591 (639)
                       ..++.+....+++|++++.+++++.+    .++  .|  +.-.  ......+|.          .+-|+. |-.+.|..
T Consensus       320 ~~iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~  398 (476)
T PTZ00075        320 KDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSF  398 (476)
T ss_pred             ccccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCee
Confidence             46888999999999999999997633    122  11  1111  111122442          366787 88999999


Q ss_pred             hhhhHHHHHHHHHhcCCCCCc
Q 006607          592 VMSAWRIAGIIHALEGWDLNE  612 (639)
Q Consensus       592 ~~~Ac~a~~~v~alEgw~~~e  612 (639)
                      +|+-.++--.+-.+|=|..++
T Consensus       399 vMd~sfa~Q~la~~~l~~~~~  419 (476)
T PTZ00075        399 VMSNSFTNQVLAQIELWENRD  419 (476)
T ss_pred             EeeHHHHHHHHHHHHHHhccC
Confidence            999998887777777776544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.18  E-value=0.049  Score=54.28  Aligned_cols=44  Identities=14%  Similarity=0.273  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|++  |+.++.+++.+++.
T Consensus         5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (251)
T PRK07231          5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL   50 (251)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            35899999998  9999999999999999988  88888887766654

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.043  Score=55.11  Aligned_cols=41  Identities=20%  Similarity=0.260  Sum_probs=35.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +.|+|+|++|  -||+++++.|+++|.+|..  |+.++.+++++.
T Consensus         3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~   45 (257)
T PRK09291          3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE   45 (257)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            4799999998  9999999999999999988  777777766654

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.054  Score=55.74  Aligned_cols=43  Identities=14%  Similarity=0.142  Sum_probs=37.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+.+++..
T Consensus         4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~   48 (277)
T PRK06180          4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEALH   48 (277)
T ss_pred             CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc
Confidence            45799999998  9999999999999999998  8888888877653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.05  E-value=0.051  Score=54.79  Aligned_cols=45  Identities=16%  Similarity=0.316  Sum_probs=38.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.++++|++|  .||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~   54 (254)
T PRK08085          8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR   54 (254)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999999  88888877766653

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.038  Score=59.27  Aligned_cols=44  Identities=14%  Similarity=0.243  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~   52 (330)
T PRK06139          7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR   52 (330)
T ss_pred             CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  99999988877753

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.03  E-value=0.03  Score=62.25  Aligned_cols=89  Identities=21%  Similarity=0.272  Sum_probs=67.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg----  532 (639)
                      ..++|+++||.   ++|.-+|.+|+++|++.++   |+.+|-++|.++++.+.    +....+.+  .++||+|.+    
T Consensus       177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~----~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA----VALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee----ecHHHHHHhhhhCCEEEEecCCC
Confidence            68899999998   9999999999999966555   99999999999988332    22333443  777888844    


Q ss_pred             -CcCChhhhhcC---CCCceeecccccCCc
Q 006607          533 -DDLTGKEQARA---PKGTIFIPYTQIPPR  558 (639)
Q Consensus       533 -~~~~~~~q~~a---~~G~~f~~~~~~~~~  558 (639)
                       -+++.++.+.+   +++..++|++ +|+.
T Consensus       250 ~~ii~~~~ve~a~~~r~~~livDia-vPRd  278 (414)
T COG0373         250 HPIITREMVERALKIRKRLLIVDIA-VPRD  278 (414)
T ss_pred             ccccCHHHHHHHHhcccCeEEEEec-CCCC
Confidence             34566655554   4447899999 8887

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.02  E-value=0.047  Score=55.00  Aligned_cols=45  Identities=16%  Similarity=0.159  Sum_probs=38.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   55 (256)
T PRK06124          9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL   55 (256)
T ss_pred             CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence            3467899999998  9999999999999999999  8778777776664

>PRK06199 ornithine cyclodeaminase; Validated

Probab=95.02  E-value=0.15  Score=56.26  Aligned_cols=155  Identities=13%  Similarity=0.115  Sum_probs=100.6

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++.=-=|....+..-.++.+.-+|+ +.-.-+.||+.+|+       |+..+-+ +++.+.+.++|+-   -.|+
T Consensus        92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~  168 (379)
T PRK06199         92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK  168 (379)
T ss_pred             eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence            577877753334433444445556656665 45589999999985       4445556 6788999999987   8999


Q ss_pred             HHHHHHhc--c-CcEEEe--cchhhHHHHHhhCCccccc--ceeeeccccc--cceeEEEEcC-----------cCChhh
Q 006607          480 AVASSLCQ--M-GIKVAT--ICKDDYEKLKLRIPVEAQH--NLVLSTSYAA--HKTKIWLVGD-----------DLTGKE  539 (639)
Q Consensus       480 ava~~L~~--~-~~~v~~--~~~~~~~~l~~~~~~~~~~--~l~~~~~~~~--~~~~vwivg~-----------~~~~~~  539 (639)
                      .-++++|+  + -.+|.+  |++++.+++.+++......  ...-+.+.++  ++++|++.-.           .++.+ 
T Consensus       169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~~~-  247 (379)
T PRK06199        169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVKRE-  247 (379)
T ss_pred             HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEecHH-
Confidence            99999984  3 346666  9999999998887654321  2223445664  8888877322           23333 


Q ss_pred             hhcCCCCceeecccc--cCCcCCCCC-ceeecC
Q 006607          540 QARAPKGTIFIPYTQ--IPPRKLRKD-CFYHST  569 (639)
Q Consensus       540 q~~a~~G~~f~~~~~--~~~~~~R~d-c~y~~~  569 (639)
                        |.+||+|+.-...  +|+.-+++| ..|-+.
T Consensus       248 --~lkpG~hv~~ig~~eld~~~l~~~a~vvvD~  278 (379)
T PRK06199        248 --WVKPGAFLLMPAACRIDEGMEQGDVRKVVDN  278 (379)
T ss_pred             --HcCCCcEEecCCcccCCHHHHhCCCcEEEcC
Confidence              4589999875432  555555553 344443

>PRK05717 oxidoreductase; Validated

Probab=95.02  E-value=0.065  Score=54.19  Aligned_cols=44  Identities=16%  Similarity=0.212  Sum_probs=37.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  +++++.+++.+++
T Consensus         9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~   54 (255)
T PRK05717          9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL   54 (255)
T ss_pred             CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence            456899999998  9999999999999999988  6777777766554

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.01  E-value=0.072  Score=56.65  Aligned_cols=150  Identities=21%  Similarity=0.271  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCC-
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS-  448 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gn-  448 (639)
                      .+-+.-+..-.+.|++.|++..-  |.       +++.++++|.|.   ++.++. -|++++.          +=|||= 
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~  123 (286)
T PRK14175         44 GASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFH  123 (286)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455566677788899987643  33       344447788874   333331 1232331          123443 


Q ss_pred             ---------------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          449 ---------------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       449 ---------------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                     .-|++.|++-+.     -..++|+++|+.+  -+|+.+|..|.++|..|++ .++.  .+|++. 
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t--~~l~~~-  198 (286)
T PRK14175        124 PINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRS--KDMASY-  198 (286)
T ss_pred             ccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCc--hhHHHH-
Confidence                           236666666554     3678999999996  7999999999999999999 2211  111111 


Q ss_pred             CcccccceeeeccccccceeEEE--EcCc--CChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006607          508 PVEAQHNLVLSTSYAAHKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  566 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  566 (639)
                                 +    ++++++|  +|+-  ++++.   .++|++++|+. +++.   ++--||-+
T Consensus       199 -----------~----~~ADIVIsAvg~p~~i~~~~---vk~gavVIDvG-i~~~~~gkl~GDvd~  245 (286)
T PRK14175        199 -----------L----KDADVIVSAVGKPGLVTKDV---VKEGAVIIDVG-NTPDENGKLKGDVDY  245 (286)
T ss_pred             -----------H----hhCCEEEECCCCCcccCHHH---cCCCcEEEEcC-CCcCCCCCeecCccH
Confidence                       0    3556655  4544  77764   48999999999 7763   34456553

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.99  E-value=0.035  Score=55.76  Aligned_cols=41  Identities=17%  Similarity=0.313  Sum_probs=36.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++
T Consensus         2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            4689999998  9999999999999999988  888888888765

>PRK05866 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.053  Score=56.80  Aligned_cols=43  Identities=23%  Similarity=0.346  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus        40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l   84 (293)
T PRK05866         40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRI   84 (293)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888887765

>PRK06500 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.06  Score=53.73  Aligned_cols=44  Identities=16%  Similarity=0.190  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK06500          6 GKTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence            35799999998  9999999999999999988  77888888777754

>PRK07774 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.056  Score=54.04  Aligned_cols=43  Identities=21%  Similarity=0.338  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+++..+++++++
T Consensus         6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~   50 (250)
T PRK07774          6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI   50 (250)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  7777777776654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.91  E-value=0.055  Score=54.75  Aligned_cols=43  Identities=16%  Similarity=0.249  Sum_probs=37.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus        12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i   56 (259)
T PRK08213         12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHL   56 (259)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888887776654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=94.89  E-value=0.064  Score=54.52  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++.++++++.
T Consensus         5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~   49 (262)
T TIGR03325         5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH   49 (262)
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence            46899999998  9999999999999999998  8888888887653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.89  E-value=0.06  Score=54.27  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=37.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T PRK10538          2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_pred             EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            589999998  9999999999999999998  88888888877654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.86  E-value=0.051  Score=54.05  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=36.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         6 ~~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l   50 (251)
T PRK12826          6 GRVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELV   50 (251)
T ss_pred             CCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  7777776666554

>TIGR02415 23BDH acetoin reductases

Probab=94.84  E-value=0.052  Score=54.43  Aligned_cols=42  Identities=19%  Similarity=0.318  Sum_probs=36.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ++++++|++|  -||+++++.|+++|.+|++  |+.++.+++.+++
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l   44 (254)
T TIGR02415         1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEI   44 (254)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4689999998  9999999999999999988  7777777666654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.83  E-value=0.053  Score=54.72  Aligned_cols=38  Identities=24%  Similarity=0.269  Sum_probs=35.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .|+|+||||  .||+++|+.|.++|.+|..  |+.++...+.
T Consensus         2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~   41 (275)
T COG0702           2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA   41 (275)
T ss_pred             eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence            689999999  9999999999999999999  9999999887

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.11  Score=55.07  Aligned_cols=126  Identities=13%  Similarity=0.112  Sum_probs=75.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHh-----cCcCCC
Q 006607          389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN-----SLPKTT  463 (639)
Q Consensus       389 ~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~-----~i~~~~  463 (639)
                      |.-.....+.+.+++..|.+       .|++|.   +| +|.++..+.   +-..=      |...+++     .++-..
T Consensus       100 Plp~~i~~~~~ld~I~~aKD-------Vdg~n~---~n-~G~l~~~~~---~~~p~------T~~gii~~L~~~~i~l~G  159 (283)
T PRK14192        100 PVPAQIDERACFDAISLAKD-------VDGVTC---LG-FGRMAMGEA---AYGSA------TPAGIMRLLKAYNIELAG  159 (283)
T ss_pred             CCccccCHHHHHhccCHHHh-------cCCCCc---cc-cCccccCCC---cccCC------cHHHHHHHHHHcCCCCCC
Confidence            33333444456677754444       356676   55 565554332   21222      3344444     345567


Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccccceeEEEEcC----cCChhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGD----DLTGKE  539 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~----~~~~~~  539 (639)
                      ++|+++|+.|  -+|+++|..|.++|..|++-+. +-++|++.+                ++++++|...    .++++.
T Consensus       160 k~vvViG~gg--~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~----------------~~aDIvI~AtG~~~~v~~~~  220 (283)
T PRK14192        160 KHAVVVGRSA--ILGKPMAMMLLNANATVTICHS-RTQNLPELV----------------KQADIIVGAVGKPELIKKDW  220 (283)
T ss_pred             CEEEEECCcH--HHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh----------------ccCCEEEEccCCCCcCCHHH
Confidence            7999999997  8999999999999999998211 223333332                2455655222    455544


Q ss_pred             hhcCCCCceeecccccCC
Q 006607          540 QARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       540 q~~a~~G~~f~~~~~~~~  557 (639)
                         .++|++++|+. ..|
T Consensus       221 ---lk~gavViDvg-~n~  234 (283)
T PRK14192        221 ---IKQGAVVVDAG-FHP  234 (283)
T ss_pred             ---cCCCCEEEEEE-Eee
Confidence               49999999998 555

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.77  E-value=0.053  Score=55.18  Aligned_cols=44  Identities=14%  Similarity=0.290  Sum_probs=36.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+   +++++.+++.+++.
T Consensus         8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   54 (260)
T PRK08416          8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE   54 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46899999997  9999999999999999987   45677776665543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.75  E-value=0.064  Score=54.62  Aligned_cols=48  Identities=15%  Similarity=0.153  Sum_probs=40.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+...+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         6 ~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~   55 (265)
T PRK07097          6 FSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR   55 (265)
T ss_pred             cCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence            344567899999998  9999999999999999988  78888877766643

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.057  Score=54.09  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=36.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |++++.+.+.+++
T Consensus         2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~   45 (243)
T PRK07102          2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL   45 (243)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence            4799999998  9999999999999999988  8887777665553

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.73  E-value=0.061  Score=53.13  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=36.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  .||+.+|+.|.++|.+|.+  |++++.+++.+++
T Consensus         6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~   49 (246)
T PRK05653          6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAEL   49 (246)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Confidence            5799999998  9999999999999999888  8878777665553

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=94.72  E-value=0.15  Score=55.35  Aligned_cols=157  Identities=15%  Similarity=0.123  Sum_probs=103.6

Q ss_pred             HcCCcEEEeccccc-ccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhh
Q 006607          408 AKGVKVISLGLLNQ-GEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV  477 (639)
Q Consensus       408 ~~G~kv~~LG~ln~-~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~ki  477 (639)
                      -.|+|+++ |-... ...|..-.++.+--.|+ +..+-+.||+.+|+       |++..-+ |++.+.+.++|+-   ..
T Consensus        66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~q  141 (330)
T COG2423          66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---AQ  141 (330)
T ss_pred             eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HH
Confidence            45667666 22222 13444444555555555 45589999999985       3444544 6689999999998   99


Q ss_pred             HHHHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE-----EcCcCChhhhhcCCCC
Q 006607          478 ANAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----VGDDLTGKEQARAPKG  546 (639)
Q Consensus       478 g~ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----vg~~~~~~~q~~a~~G  546 (639)
                      |+.-+++++  +...++.+  |+++.-+++.+.+..........+.+.++  .+++|++     -.-.++.+.+   +||
T Consensus       142 A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l---~~G  218 (330)
T COG2423         142 ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWL---KPG  218 (330)
T ss_pred             HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhc---CCC
Confidence            999999999  55566666  99999998887766665544234556664  6777777     2233444444   799


Q ss_pred             ceeecccc-------cCCc-CCCCCceeecCCc
Q 006607          547 TIFIPYTQ-------IPPR-KLRKDCFYHSTPA  571 (639)
Q Consensus       547 ~~f~~~~~-------~~~~-~~R~dc~y~~~~a  571 (639)
                      +|+.-+..       ++++ -.|-||.+-+.+.
T Consensus       219 ~hI~aiGad~p~k~Eld~e~l~ra~~vvvD~~~  251 (330)
T COG2423         219 THINAIGADAPGKRELDPEVLARADRVVVDSLE  251 (330)
T ss_pred             cEEEecCCCCcccccCCHHHHHhcCeEEEcCHH
Confidence            99998874       4444 3345566665554

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.70  E-value=0.061  Score=59.29  Aligned_cols=137  Identities=13%  Similarity=0.097  Sum_probs=75.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE--EcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL--VGD  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi--vg~  533 (639)
                      ...+|.++||||  -+|+.+.+.|.++ +.+++.  ++++.-+.+...-+.-.+..+..+.+++  + +++|+++  +|.
T Consensus        37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~  114 (381)
T PLN02968         37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH  114 (381)
T ss_pred             cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence            456999999999  9999999999955 888777  3322222222221111111111122233  2 5677766  455


Q ss_pred             cCChhhhhcCCCCceeecccccCCc-CCCCCceeecC--CccccCCCCccccccccccC---------cc-hhhh-HHHH
Q 006607          534 DLTGKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST--PAMIIPPSLSNMHSCENWLG---------RR-VMSA-WRIA  599 (639)
Q Consensus       534 ~~~~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~--~a~~~P~~~~~~~~~e~~~p---------r~-~~~A-c~a~  599 (639)
                      ..+.+--..+.+|..+||.|   .. .+++|..|.+-  -....|+-.+.   +-+++|         ++ +.-+ |.+-
T Consensus       115 ~~s~~i~~~~~~g~~VIDlS---s~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~t  188 (381)
T PLN02968        115 GTTQEIIKALPKDLKIVDLS---ADFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYPT  188 (381)
T ss_pred             HHHHHHHHHHhCCCEEEEcC---chhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHHH
Confidence            44444444456788888887   22 34456665554  22234432221   224443         22 2233 9999


Q ss_pred             HHHHHhc
Q 006607          600 GIIHALE  606 (639)
Q Consensus       600 ~~v~alE  606 (639)
                      +++++|-
T Consensus       189 ~~~laL~  195 (381)
T PLN02968        189 GIQLPLV  195 (381)
T ss_pred             HHHHHHH
Confidence            9998773

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=94.67  E-value=0.085  Score=56.38  Aligned_cols=48  Identities=15%  Similarity=0.078  Sum_probs=37.6

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       457 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ++......+|+|+|++|  -||+.+++.|.++|.+|..  |+.++.+.+.++
T Consensus         4 ~~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~   53 (353)
T PLN02896          4 EGRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK   53 (353)
T ss_pred             cccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh
Confidence            34444567899999999  9999999999999999987  666655555444

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.074  Score=53.21  Aligned_cols=43  Identities=21%  Similarity=0.337  Sum_probs=37.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++++++.
T Consensus         3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~   47 (248)
T PRK08251          3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELL   47 (248)
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  88888888876644

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.047  Score=55.73  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  .||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (273)
T PRK07825          5 GKVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG   50 (273)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            35799999998  9999999999999999988  88888888877654

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.041  Score=55.69  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~   53 (260)
T PRK07063          7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR   53 (260)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988  888888888877543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.63  E-value=0.16  Score=56.75  Aligned_cols=138  Identities=14%  Similarity=0.148  Sum_probs=87.7

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  532 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  532 (639)
                      ....++|+|+|. |  .||+.+|+.|...|.+|++  +++.+.......   +.     .+.++++  ..++++|  .| 
T Consensus       209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~---G~-----~v~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMD---GF-----RVMTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc---CC-----EecCHHHHHhCCCEEEECCCC
Confidence            335678999997 5  9999999999999999999  455443322111   11     1223332  5667766  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---ccc--CCCCccccccccccCcch
Q 006607          533 -DDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRV  592 (639)
Q Consensus       533 -~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~~--P~~~~~~~~~e~~~pr~~  592 (639)
                       +.++.+....+++|++++-+..++.+              +.|+.+.-...|.   +.+  -+.+-|+- |..+.|..+
T Consensus       278 ~~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~v  356 (425)
T PRK05476        278 KDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEV  356 (425)
T ss_pred             HHHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCccee
Confidence             34777888899999999988876542              2233333111211   111  12355676 899999999


Q ss_pred             hhhHHHHHHHHHhcCCC
Q 006607          593 MSAWRIAGIIHALEGWD  609 (639)
Q Consensus       593 ~~Ac~a~~~v~alEgw~  609 (639)
                      |.-.+|.=.+-+++=|.
T Consensus       357 md~sfa~q~l~~~~l~~  373 (425)
T PRK05476        357 MDMSFANQALAQIELFT  373 (425)
T ss_pred             eCHHHHHHHHHHHHHHh
Confidence            98777666555555554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.62  E-value=0.061  Score=56.47  Aligned_cols=38  Identities=21%  Similarity=0.136  Sum_probs=32.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      +.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+++
T Consensus         6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   45 (322)
T PLN02986          6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRKKT   45 (322)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchHHH
Confidence            6899999999  9999999999999999975  666554443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.60  E-value=0.049  Score=58.54  Aligned_cols=53  Identities=19%  Similarity=0.203  Sum_probs=44.8

Q ss_pred             HHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       455 v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.+.++-..+.++++|+|+  -||+++|+.|+++|.+|.|  ||.++-++.++++..
T Consensus        27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~   81 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK   81 (314)
T ss_pred             eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            3444555557899999996  9999999999999999999  999999888888665

>PRK07677 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.07  Score=53.84  Aligned_cols=43  Identities=26%  Similarity=0.392  Sum_probs=37.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus         2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   46 (252)
T PRK07677          2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE   46 (252)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  88888888776654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.57  E-value=0.06  Score=53.94  Aligned_cols=39  Identities=21%  Similarity=0.299  Sum_probs=32.6

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhh
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLR  506 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~  506 (639)
                      |+|+||||  ++|+.++++|.+++.+|..  |+.  ++.++|++.
T Consensus         1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~   43 (233)
T PF05368_consen    1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL   43 (233)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT
T ss_pred             CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc
Confidence            78999999  9999999999999999888  653  456666654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK09072 short chain dehydrogenase; Provisional

Probab=94.56  E-value=0.081  Score=53.74  Aligned_cols=43  Identities=26%  Similarity=0.394  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |++++.+++++++
T Consensus         5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (263)
T PRK09072          5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL   49 (263)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  8888888888775

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.56  E-value=0.045  Score=57.90  Aligned_cols=44  Identities=16%  Similarity=0.150  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |+.++.++..+++.
T Consensus        14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~   59 (313)
T PRK05854         14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIR   59 (313)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999997  9999999999999999998  88888887766653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.53  E-value=0.082  Score=52.25  Aligned_cols=43  Identities=23%  Similarity=0.291  Sum_probs=33.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~  507 (639)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  ++. ++.+++.+++
T Consensus         5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~   50 (248)
T PRK05557          5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI   50 (248)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            46899999998  9999999999999999966  433 3455554443

>PRK07024 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.06  Score=54.58  Aligned_cols=44  Identities=18%  Similarity=0.363  Sum_probs=39.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.++++++++.
T Consensus         3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   48 (257)
T PRK07024          3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK   48 (257)
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence            5799999998  9999999999999999998  888888888777643

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.52  E-value=0.075  Score=55.03  Aligned_cols=44  Identities=11%  Similarity=0.203  Sum_probs=37.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~   51 (275)
T PRK05876          6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR   51 (275)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            35799999997  9999999999999999998  88888887766653

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.08  Score=52.75  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (250)
T PRK12939          7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL   51 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            47899999998  9999999999999999888  7778777776654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.50  E-value=0.081  Score=55.83  Aligned_cols=44  Identities=18%  Similarity=0.183  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~   51 (322)
T PRK07453          6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG   51 (322)
T ss_pred             CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            46799999998  9999999999999999988  88888888877763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.50  E-value=0.076  Score=53.14  Aligned_cols=42  Identities=19%  Similarity=0.133  Sum_probs=35.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++.+++
T Consensus         3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   47 (248)
T PRK06947          3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV   47 (248)
T ss_pred             cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999876   5667776665554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.48  E-value=0.07  Score=49.95  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=35.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cc--hhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~--~~~~~~l~~~~~  508 (639)
                      |.|+++|+++  -||+++|+.|+++ +.+|.+  |+  .++.+++.++++
T Consensus         1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~   48 (167)
T PF00106_consen    1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK   48 (167)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence            5789999997  9999999999988 556566  77  678888877655

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=94.46  E-value=0.044  Score=58.26  Aligned_cols=29  Identities=21%  Similarity=0.229  Sum_probs=27.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+|+||+|  =||+++++.|.++|.+|..
T Consensus         1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~   29 (343)
T TIGR01472         1 KIALITGITG--QDGSYLAEFLLEKGYEVHG   29 (343)
T ss_pred             CeEEEEcCCC--cHHHHHHHHHHHCCCEEEE
Confidence            4799999999  9999999999999999997

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06172 short chain dehydrogenase; Provisional

Probab=94.42  E-value=0.08  Score=53.24  Aligned_cols=43  Identities=21%  Similarity=0.170  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (253)
T PRK06172          7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALI   51 (253)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888877766654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.42  E-value=0.084  Score=53.09  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=37.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++.+++.+++
T Consensus         7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   51 (262)
T PRK13394          7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI   51 (262)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8887777776664

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.41  E-value=0.1  Score=54.98  Aligned_cols=61  Identities=23%  Similarity=0.185  Sum_probs=45.6

Q ss_pred             eecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCC
Q 006607          444 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       444 vv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~  508 (639)
                      =|||-....+.--..++. .++|++.||-|   .|||++.+|.+.|++ +.+  |+.++-++|.+++.
T Consensus       104 NTD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~  167 (272)
T PRK12550        104 NTDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG  167 (272)
T ss_pred             ecCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence            366766665553334433 35899999976   589999999998975 777  99999999987754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.40  E-value=0.14  Score=48.96  Aligned_cols=71  Identities=15%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec
Q 006607          458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG  532 (639)
Q Consensus       458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg  532 (639)
                      +++-..++|.++|.+.  .+|+.+|..|.++|..|++ .++.                    .++++  +.+||+|  +|
T Consensus        23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t--------------------~~l~~~v~~ADIVvsAtg   80 (140)
T cd05212          23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKT--------------------IQLQSKVHDADVVVVGSP   80 (140)
T ss_pred             CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCC--------------------cCHHHHHhhCCEEEEecC
Confidence            4455788999999998  9999999999999999999 2111                    01221  4566655  33


Q ss_pred             --CcCChhhhhcCCCCceeeccc
Q 006607          533 --DDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       533 --~~~~~~~q~~a~~G~~f~~~~  553 (639)
                        ..++++.   .++|++++|+.
T Consensus        81 ~~~~i~~~~---ikpGa~Vidvg  100 (140)
T cd05212          81 KPEKVPTEW---IKPGATVINCS  100 (140)
T ss_pred             CCCccCHHH---cCCCCEEEEcC
Confidence              2355554   49999999887

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.39  E-value=0.086  Score=52.96  Aligned_cols=42  Identities=24%  Similarity=0.237  Sum_probs=35.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|.++|.+|.+   |++++.+++.+++
T Consensus         7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~   51 (254)
T PRK12746          7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI   51 (254)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            6899999998  9999999999999999965   6777776665554

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.38  E-value=0.096  Score=52.35  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=37.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  .||+++|+.|.++|.+|.+  |+.++.+..++++.
T Consensus         5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (252)
T PRK06138          5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA   50 (252)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  88887777666643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.37  E-value=0.052  Score=55.12  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=37.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   45 (259)
T PRK08340          2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELK   45 (259)
T ss_pred             eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            689999998  9999999999999999998  88888888877754

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.093  Score=52.90  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=37.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~   47 (257)
T PRK07074          3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG   47 (257)
T ss_pred             CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999988  88888888777653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.37  E-value=0.1  Score=52.25  Aligned_cols=142  Identities=15%  Similarity=0.150  Sum_probs=89.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCcCChh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDLTGK  538 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~~~~  538 (639)
                      +|.++||+|  ++|+.++.-..+||.+|+-  ||..+...+|..  .-.+..+...+++.+  ...+++|  .|.+.+.+
T Consensus         2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~--~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGV--TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccc--eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            689999999  9999999999999999998  998887654222  111112112222221  3334444  44443222


Q ss_pred             hh-----------------------------hcCCCCceeecccccCCc-------------CCC----CCceeecCCcc
Q 006607          539 EQ-----------------------------ARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPAM  572 (639)
Q Consensus       539 ~q-----------------------------~~a~~G~~f~~~~~~~~~-------------~~R----~dc~y~~~~a~  572 (639)
                      |.                             .-+-+|+..+|.-+||.+             .+|    -|-+|.+-+++
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~  157 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAF  157 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence            22                             123466777777777753             122    57889999999


Q ss_pred             ccCCCCcc-cc------ccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607          573 IIPPSLSN-MH------SCENWLGRRVMSAWRIAGIIHALEGWDL  610 (639)
Q Consensus       573 ~~P~~~~~-~~------~~e~~~pr~~~~Ac~a~~~v~alEgw~~  610 (639)
                      -.|++=.| +.      -.|-.=..|..+|=-|.+|+-++|.=.+
T Consensus       158 f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h  202 (211)
T COG2910         158 FEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQH  202 (211)
T ss_pred             cCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccc
Confidence            99974111 00      0222234678888999999999997544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.37  E-value=0.08  Score=53.44  Aligned_cols=42  Identities=17%  Similarity=0.244  Sum_probs=36.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~   46 (259)
T PRK12384          3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEI   46 (259)
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  7777777776654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.37  E-value=0.079  Score=54.24  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   55 (278)
T PRK08277         10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK   55 (278)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888887777653

>PRK08589 short chain dehydrogenase; Validated

Probab=94.36  E-value=0.075  Score=54.62  Aligned_cols=43  Identities=23%  Similarity=0.278  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+ ++.+++.+++.
T Consensus         6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~   50 (272)
T PRK08589          6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK   50 (272)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence            46799999998  9999999999999999998  66 77777666653

>PRK05993 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.06  Score=55.45  Aligned_cols=42  Identities=19%  Similarity=0.265  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.+++++++++
T Consensus         4 ~k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~   47 (277)
T PRK05993          4 KRSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEAE   47 (277)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC
Confidence            35799999998  9999999999999999998  888888888764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.33  E-value=0.093  Score=53.12  Aligned_cols=44  Identities=14%  Similarity=0.220  Sum_probs=35.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ...+.|+++|++|  -||+++|+.|+++|.+|.+  |+ ++.+++++++
T Consensus        13 l~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~   58 (258)
T PRK06935         13 LDGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI   58 (258)
T ss_pred             CCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence            3457899999998  9999999999999999988  55 5556665553

>PRK07831 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.084  Score=53.57  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=37.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++| +-||+++|+.|+++|.+|.+  |+.+++++..+++.
T Consensus        17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~   63 (262)
T PRK07831         17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELA   63 (262)
T ss_pred             CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999996 35999999999999999998  77777776665543

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.28  E-value=0.064  Score=53.72  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=36.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~   44 (223)
T PRK05884          2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL   44 (223)
T ss_pred             eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            589999998  9999999999999999988  8888888887665

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.076  Score=55.48  Aligned_cols=46  Identities=17%  Similarity=0.244  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~   55 (296)
T PRK05872          8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG   55 (296)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence            356899999998  9999999999999999988  899999999888754

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.24  E-value=0.084  Score=53.49  Aligned_cols=45  Identities=20%  Similarity=0.265  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   53 (259)
T PRK06125          7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA   53 (259)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence            47899999997  9999999999999999988  888888887776543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.23  E-value=0.096  Score=52.26  Aligned_cols=43  Identities=21%  Similarity=0.326  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++++++
T Consensus         3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~   47 (250)
T TIGR03206         3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADI   47 (250)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7777777776654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.22  E-value=0.093  Score=53.61  Aligned_cols=41  Identities=17%  Similarity=0.296  Sum_probs=35.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +|+++|++|  -||+++|+.|+++|.+|++  |+.++.+++.+++
T Consensus         2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   44 (270)
T PRK05650          2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL   44 (270)
T ss_pred             EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            689999998  9999999999999999988  8888877766554

>PRK07814 short chain dehydrogenase; Provisional

Probab=94.20  E-value=0.1  Score=53.10  Aligned_cols=44  Identities=14%  Similarity=0.243  Sum_probs=38.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++
T Consensus         9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l   54 (263)
T PRK07814          9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI   54 (263)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  8888887776664

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.18  E-value=0.088  Score=55.05  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=36.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++
T Consensus        15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l   60 (306)
T PRK06197         15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI   60 (306)
T ss_pred             CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999877  8777766554443

>PRK08017 oxidoreductase; Provisional

Probab=94.15  E-value=0.072  Score=53.49  Aligned_cols=40  Identities=23%  Similarity=0.295  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+.+++
T Consensus         3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~   44 (256)
T PRK08017          3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS   44 (256)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence            5799999998  9999999999999999988  88888776654

>PRK05599 hypothetical protein; Provisional

Probab=94.14  E-value=0.088  Score=53.36  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=36.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .|+++|+++  -||+++|+.|++ |.+|.+  |++++++++++++.+
T Consensus         2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~   45 (246)
T PRK05599          2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ   45 (246)
T ss_pred             eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence            589999997  999999999995 999999  899999988887643

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.13  E-value=0.063  Score=54.50  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=39.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.++++|++|  .||+++|+.|+++|.+|.+  |+.++++++.+++..
T Consensus         7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (265)
T PRK07062          7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE   54 (265)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence            356899999997  9999999999999999988  888888877766543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.12  E-value=0.13  Score=54.49  Aligned_cols=168  Identities=17%  Similarity=0.177  Sum_probs=90.9

Q ss_pred             CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCC
Q 006607          383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT  462 (639)
Q Consensus       383 ~~~y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~  462 (639)
                      |+-=.+|.-.++ -+++.+.=..|++.|       +.|-.  ++.+|. ..--|        |||--...+.--..+...
T Consensus        63 G~nVTiP~K~~~-~~~~D~l~~~A~~iG-------AVNTv--~~~~g~-l~G~N--------TD~~Gf~~~l~~~~~~~~  123 (288)
T PRK12749         63 GTGVSMPNKQLA-CEYVDELTPAAKLVG-------AINTI--VNDDGY-LRGYN--------TDGTGHIRAIKESGFDIK  123 (288)
T ss_pred             EEEECcCCHHHH-HHHhccCCHHHHHhC-------ceeEE--EccCCE-EEEEe--------cCHHHHHHHHHhcCCCcC
Confidence            445556664433 333555555666655       44442  123443 12223        566665555543344444


Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cch---hhHHHHHhhCCcccccceeeeccc------c-c-cceeE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPVEAQHNLVLSTSY------A-A-HKTKI  528 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~---~~~~~l~~~~~~~~~~~l~~~~~~------~-~-~~~~v  528 (639)
                      .++|+|.||-|  . ||||+..|++.|+ ++++  |++   ++.++|.+++....... +.+.++      + + .++++
T Consensus       124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~-~~~~~~~~~~~l~~~~~~aDi  199 (288)
T PRK12749        124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLADQQAFAEALASADI  199 (288)
T ss_pred             CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCce-EEEechhhhhhhhhhcccCCE
Confidence            56899999987  3 8999999998887 5666  763   58888888765433221 112222      2 2 45677


Q ss_pred             EE----EcCcC--C---hhhhhcCCCCceeecccccCCcC------CC-CCceeecCCcccc
Q 006607          529 WL----VGDDL--T---GKEQARAPKGTIFIPYTQIPPRK------LR-KDCFYHSTPAMII  574 (639)
Q Consensus       529 wi----vg~~~--~---~~~q~~a~~G~~f~~~~~~~~~~------~R-~dc~y~~~~a~~~  574 (639)
                      +|    +|-.=  +   +.+....+++..+.|+. -.|.+      .| +-|....+..|-+
T Consensus       200 vINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v-Y~P~~T~ll~~A~~~G~~~~~Gl~ML~  260 (288)
T PRK12749        200 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGMLL  260 (288)
T ss_pred             EEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEec-CCCccCHHHHHHHHCCCeEECCHHHHH
Confidence            77    33210  0   01222346677777776 33331      12 4566666655543

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.12  E-value=0.062  Score=56.99  Aligned_cols=44  Identities=20%  Similarity=0.301  Sum_probs=37.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+-|+++||++  =||.++|..|+++|.++.+  |+.+|++++++++
T Consensus        11 ~~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l   56 (282)
T KOG1205|consen   11 AGKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEEL   56 (282)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHH
Confidence            356789999995  9999999999999999777  8888888886663

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.11  E-value=0.14  Score=58.47  Aligned_cols=181  Identities=15%  Similarity=0.154  Sum_probs=105.6

Q ss_pred             HHHcCCcEEEecccc------------cccccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccC
Q 006607          406 ADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVT  473 (639)
Q Consensus       406 A~~~G~kv~~LG~ln------------~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg  473 (639)
                      ..++|+.++++=.+.            ++-++.|+..+..+-|  .+.-++ +|.+-++.    .+|  .++|+|.|+- 
T Consensus       104 l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG-  173 (511)
T TIGR00561       104 LAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG-  173 (511)
T ss_pred             HHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC-
Confidence            356778888766443            3345555555444423  033333 45544332    344  4899999985 


Q ss_pred             chhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc------------ccceeeec-c--------ccc--cceeE
Q 006607          474 ANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------------QHNLVLST-S--------YAA--HKTKI  528 (639)
Q Consensus       474 ~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~------------~~~l~~~~-~--------~~~--~~~~v  528 (639)
                        -+|.+.+..+...|.+|.+  ++.++++..++ ++.+.            ..+-...+ .        +.+  +++||
T Consensus       174 --~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DI  250 (511)
T TIGR00561       174 --VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDI  250 (511)
T ss_pred             --HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCE
Confidence              8999999999999998887  77778776664 33322            01100111 1        111  55677


Q ss_pred             EE--E---cC----cCChhhhhcCCCCceeecccccCCc----CCCCCceeecCCccccCCCCccccccccccCcc---h
Q 006607          529 WL--V---GD----DLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---V  592 (639)
Q Consensus       529 wi--v---g~----~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~---~  592 (639)
                      +|  +   |+    .+++++.+.+++|.+++|++ .++-    -.|.|.+|.+.      +.+.  +.|--.+|.+   +
T Consensus       251 VI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA-~d~GGn~E~t~p~~~~~~~------~GV~--~~gv~nlPs~~p~~  321 (511)
T TIGR00561       251 IITTALIPGKPAPKLITEEMVDSMKAGSVIVDLA-AEQGGNCEYTKPGEVYTTE------NQVK--VIGYTDLPSRLPTQ  321 (511)
T ss_pred             EEECcccCCCCCCeeehHHHHhhCCCCCEEEEee-eCCCCCEEEecCceEEEec------CCEE--EEeeCCccccCHHH
Confidence            66  3   43    38999999999999999999 6654    22333333221      1122  3356667765   3


Q ss_pred             hhhHHHHHHHHHhcCC
Q 006607          593 MSAWRIAGIIHALEGW  608 (639)
Q Consensus       593 ~~Ac~a~~~v~alEgw  608 (639)
                      .|--.+..++.-||.-
T Consensus       322 AS~l~s~nl~~~l~~l  337 (511)
T TIGR00561       322 SSQLYGTNLVNLLKLL  337 (511)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3335556665555553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.10  E-value=0.12  Score=51.65  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~   51 (239)
T PRK07666          7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV   51 (239)
T ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            36799999998  9999999999999999988  8877777766554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.10  E-value=0.065  Score=57.11  Aligned_cols=78  Identities=14%  Similarity=0.193  Sum_probs=48.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecccccccee-EEEEcCcCChhhhh
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTK-IWLVGDDLTGKEQA  541 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-vwivg~~~~~~~q~  541 (639)
                      |+++||+|  +||+.+|+.|++.+. ++.+  +++..+-.+++++.......     ++   ..+ +-++||.-+.+...
T Consensus         1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----~v---~~~~~~vigDvrd~~~l~   70 (293)
T PF02719_consen    1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----KV---RFEIVPVIGDVRDKERLN   70 (293)
T ss_dssp             EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----TC---EEEEE--CTSCCHHHHHH
T ss_pred             CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----Cc---ccccCceeecccCHHHHH
Confidence            78999999  999999999998886 4555  88889999999975433221     01   112 34678877776654


Q ss_pred             cC----CCCceeeccc
Q 006607          542 RA----PKGTIFIPYT  553 (639)
Q Consensus       542 ~a----~~G~~f~~~~  553 (639)
                      .+    .+-.+||--+
T Consensus        71 ~~~~~~~pdiVfHaAA   86 (293)
T PF02719_consen   71 RIFEEYKPDIVFHAAA   86 (293)
T ss_dssp             HHTT--T-SEEEE---
T ss_pred             HHHhhcCCCEEEEChh
Confidence            44    5555555444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK09135 pteridine reductase; Provisional

Probab=94.09  E-value=0.1  Score=51.82  Aligned_cols=43  Identities=21%  Similarity=0.363  Sum_probs=34.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+.+|+.|+++|.+|.+  | ++++.+.+++++
T Consensus         6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~   51 (249)
T PRK09135          6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL   51 (249)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  4 345566665543

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.12  Score=53.20  Aligned_cols=44  Identities=25%  Similarity=0.288  Sum_probs=36.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++
T Consensus         9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   54 (274)
T PRK07775          9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI   54 (274)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999877  7777777665553

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.04  E-value=0.079  Score=53.35  Aligned_cols=45  Identities=20%  Similarity=0.420  Sum_probs=38.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  .||+++|+.|+++|.+|.+  |++++.++++++.+
T Consensus        10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~   56 (264)
T PRK12829         10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP   56 (264)
T ss_pred             CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            347899999998  9999999999999999988  88888887776644

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.97  E-value=0.077  Score=56.37  Aligned_cols=148  Identities=22%  Similarity=0.254  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh-
Q 006607          394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS-  449 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns-  449 (639)
                      +-+.-+...++.|++.|++..  -|.       +++..++||.|-   ++.++. -|++++.          +=|||=+ 
T Consensus        45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~  124 (284)
T PRK14179         45 ASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHP  124 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCH
Confidence            444556666778888888764  344       233336778775   333331 1222331          1234432 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607          450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  508 (639)
Q Consensus       450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~  508 (639)
                                     -|++.|++=+     +-.-++|.++|.+|  -+|+.+|..|.++|..|++ .++.+         
T Consensus       125 ~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~---------  193 (284)
T PRK14179        125 MNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR---------  193 (284)
T ss_pred             hhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC---------
Confidence                           4677776644     44678999999998  9999999999999999999 21111         


Q ss_pred             cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceee
Q 006607          509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYH  567 (639)
Q Consensus       509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~  567 (639)
                                 ++++  ++++|+|  +|  +.++++.   .++|+++||++ +.+.   ++.-|+-+.
T Consensus       194 -----------~l~~~~~~ADIVI~avg~~~~v~~~~---ik~GavVIDvg-in~~~~gkl~GDVdf~  246 (284)
T PRK14179        194 -----------NLAEVARKADILVVAIGRGHFVTKEF---VKEGAVVIDVG-MNRDENGKLIGDVDFD  246 (284)
T ss_pred             -----------CHHHHHhhCCEEEEecCccccCCHHH---ccCCcEEEEec-ceecCCCCeecCccHH
Confidence                       1222  4566655  33  3355443   69999999999 6652   444665533

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.97  E-value=0.14  Score=50.91  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|..|.+  |+.++.+++.+++
T Consensus         6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~   50 (245)
T PRK12936          6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL   50 (245)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            46899999998  9999999999999999887  7777777776554

>PRK06484 short chain dehydrogenase; Validated

Probab=93.96  E-value=0.12  Score=58.06  Aligned_cols=46  Identities=17%  Similarity=0.184  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus       268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~  315 (520)
T PRK06484        268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD  315 (520)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            456899999998  9999999999999999998  888999988877643

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.94  E-value=0.14  Score=54.97  Aligned_cols=117  Identities=15%  Similarity=0.071  Sum_probs=74.7

Q ss_pred             ceeeecCCCCcc--eee-ecCChhHH-------HHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHh-ccCc-EEEe--
Q 006607          430 EIYLERQPNKLK--IKV-VDGSSLAA-------AVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT--  494 (639)
Q Consensus       430 ~~~~~k~p~~L~--irv-v~Gnslta-------a~v~~~-i~~~~~~V~~~Gatg~~kig~ava~~L~-~~~~-~v~~--  494 (639)
                      ++.+.-+|+ -.  ..+ .||+.+|+       ++.... -+++.++|.++|+-   ..|++.+++|+ .+++ +|.+  
T Consensus        86 g~i~l~d~~-tG~~~ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~  161 (326)
T TIGR02992        86 GMMVLLSSR-TGLLQALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWA  161 (326)
T ss_pred             EEEEEEECC-CCCceEEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEEC
Confidence            344444544 22  344 37777764       122222 25677899999996   79999999998 4664 4666  


Q ss_pred             cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC-----cCChhhhhcCCCCceeeccc
Q 006607          495 ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD-----DLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       495 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~-----~~~~~~q~~a~~G~~f~~~~  553 (639)
                      |+.++.+++.+++..+.+.......++++  ++++|++.-.     .++++.   .++|+++..+.
T Consensus       162 R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~---l~~g~~i~~vg  224 (326)
T TIGR02992       162 RDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEW---LEPGQHVTAMG  224 (326)
T ss_pred             CCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHH---cCCCcEEEeeC
Confidence            99999999988875443333222334554  7788877322     234444   48999988775

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1

Probab=93.94  E-value=0.15  Score=50.63  Aligned_cols=54  Identities=17%  Similarity=0.338  Sum_probs=39.0

Q ss_pred             HHHHhhccCCceecccc--chhccCCcccccCChhhHHHhhcC-CCCCcCCCcchhhhhcCC
Q 006607          215 DFMNNMGHCNFEFIPMW--LFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGT  273 (639)
Q Consensus       215 ~~~~~~~HsGye~~P~~--~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~lWDrLFGT  273 (639)
                      ....-+.|.... .|.+  +-+..+    ++.+|++|..||.. +++|||...++|+.+...
T Consensus        99 nq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~  155 (178)
T PF10520_consen   99 NQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDK  155 (178)
T ss_pred             HHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHH
Confidence            334567788655 4654  112223    35699999999999 899999999999988664

UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.93  E-value=0.12  Score=57.56  Aligned_cols=151  Identities=19%  Similarity=0.199  Sum_probs=91.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----  531 (639)
                      ..++|+++|+ |  .+|+.++++|.+.| .+|++  |+.++.+++.++++...    +...++.+  ..++++|.     
T Consensus       179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~----i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA----VKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE----eeHHHHHHHHhhCCEEEECCCCC
Confidence            4578999998 6  99999999999999 56777  88888888888765421    11223332  56777762     


Q ss_pred             cCcCChhhhhcCC----CCceeecccccCCc---CC--CCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHH
Q 006607          532 GDDLTGKEQARAP----KGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGII  602 (639)
Q Consensus       532 g~~~~~~~q~~a~----~G~~f~~~~~~~~~---~~--R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v  602 (639)
                      .-.+++++.+.+.    .+.+++|.+ +|+.   +.  -+++.+.      .-++++.+  ++-.+..|.-.+=.|+.||
T Consensus       252 ~~ii~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~------~vDdl~~~--~~~n~~~r~~~~~~a~~ii  322 (417)
T TIGR01035       252 HPIVSKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLY------DVDDLQPV--VEENLAERREEAEKAEEIV  322 (417)
T ss_pred             CceEcHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEE------EHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence            1235666665442    356888998 5554   11  1222211      11122211  3334555666667888887


Q ss_pred             H----HhcCCCCC-ccch-h--h-hhHHHHHHHHH
Q 006607          603 H----ALEGWDLN-ECGQ-T--M-CDIHQVWHASL  628 (639)
Q Consensus       603 ~----alEgw~~~-e~G~-i--v-~~i~~iw~aa~  628 (639)
                      -    +++.|... ..-. |  + ++++++-+.-+
T Consensus       323 ~~~~~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el  357 (417)
T TIGR01035       323 EEETAEFKQWLRSLEVEPTIKALRSLAEIVREKEL  357 (417)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence            6    77777765 5665 4  3 66666654443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.93  E-value=0.16  Score=53.65  Aligned_cols=125  Identities=13%  Similarity=0.049  Sum_probs=77.0

Q ss_pred             ecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeec
Q 006607          445 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST  519 (639)
Q Consensus       445 v~Gnsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~  519 (639)
                      |||.-...+.--..+  +...++|+|+||-   -.|||++.+|.+.|+ ++++  |+.+|.++|.++......  ...+.
T Consensus       105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~--~~~~~  179 (282)
T TIGR01809       105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGV--ITRLE  179 (282)
T ss_pred             CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCc--ceecc
Confidence            667666666543332  2245789999996   579999999999997 5777  999999999887643211  11111


Q ss_pred             ---ccc-c-cceeEEE----EcCcCChhhhhc---------CCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607          520 ---SYA-A-HKTKIWL----VGDDLTGKEQAR---------APKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       520 ---~~~-~-~~~~vwi----vg~~~~~~~q~~---------a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  574 (639)
                         .++ . .+++++|    +|..++++++..         .+++..+.|..=-|.+     ..| +-|....+..|-+
T Consensus       180 ~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  258 (282)
T TIGR01809       180 GDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPTPLVAIVSAAGWRVISGLQMLL  258 (282)
T ss_pred             chhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCCHHHHHHHHCCCEEECcHHHHH
Confidence               122 2 4567777    676666655421         2456677777732222     112 4466666666654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02253 xanthoxin dehydrogenase

Probab=93.87  E-value=0.12  Score=53.01  Aligned_cols=45  Identities=16%  Similarity=0.163  Sum_probs=38.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.+..+++.+++..
T Consensus        18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   64 (280)
T PLN02253         18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG   64 (280)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence            46899999998  9999999999999999988  677777777776643

>PRK06182 short chain dehydrogenase; Validated

Probab=93.86  E-value=0.094  Score=53.66  Aligned_cols=41  Identities=24%  Similarity=0.266  Sum_probs=35.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |+.++++++.+
T Consensus         3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~   45 (273)
T PRK06182          3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS   45 (273)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            36799999998  9999999999999999998  88888776654

>PRK06057 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.095  Score=52.97  Aligned_cols=44  Identities=16%  Similarity=0.122  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   52 (255)
T PRK06057          7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG   52 (255)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence            36899999998  9999999999999999988  88888887777654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.79  E-value=0.16  Score=50.77  Aligned_cols=44  Identities=23%  Similarity=0.323  Sum_probs=36.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   +++++.+++.++++
T Consensus         5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~   51 (253)
T PRK08642          5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG   51 (253)
T ss_pred             CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence            36799999998  9999999999999999976   45666676666543

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.13  Score=52.00  Aligned_cols=42  Identities=17%  Similarity=0.287  Sum_probs=35.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|++  |+.++.+++.+++
T Consensus         2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l   45 (263)
T PRK06181          2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQEL   45 (263)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            4689999998  9999999999999999998  7777777665554

>PRK07576 short chain dehydrogenase; Provisional

Probab=93.78  E-value=0.14  Score=52.39  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=37.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++
T Consensus         8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   53 (264)
T PRK07576          8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL   53 (264)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  7887777665554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.77  E-value=0.13  Score=50.87  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=33.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~  506 (639)
                      ++|+++|++|  .||+++|+.|+++|.+|++   ++.++.+.+.++
T Consensus         7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~   50 (249)
T PRK12825          7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEA   50 (249)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence            5899999998  9999999999999999877   445555555544

>PLN02583 cinnamoyl-CoA reductase

Probab=93.75  E-value=0.17  Score=52.99  Aligned_cols=31  Identities=16%  Similarity=0.111  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~   35 (297)
T PLN02583          5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHA   35 (297)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            356899999999  9999999999999999987

>PRK07806 short chain dehydrogenase; Provisional

Probab=93.71  E-value=0.13  Score=51.50  Aligned_cols=43  Identities=21%  Similarity=0.224  Sum_probs=34.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|.++|.+|.+  |+. ++.+++.+++
T Consensus         6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l   51 (248)
T PRK07806          6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI   51 (248)
T ss_pred             CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence            36799999998  9999999999999999977  654 3555555443

>PRK08862 short chain dehydrogenase; Provisional

Probab=93.67  E-value=0.099  Score=52.78  Aligned_cols=43  Identities=5%  Similarity=0.156  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus         5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i   49 (227)
T PRK08862          5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQC   49 (227)
T ss_pred             CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence            46899999997  9999999999999999999  8899888877664

>PRK12742 oxidoreductase; Provisional

Probab=93.65  E-value=0.11  Score=51.55  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=36.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+   +++++.+++.++.+
T Consensus         6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~   52 (237)
T PRK12742          6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG   52 (237)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC
Confidence            46899999998  9999999999999999876   46677777766543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.63  E-value=0.18  Score=48.33  Aligned_cols=63  Identities=16%  Similarity=0.218  Sum_probs=45.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-c------ccccceeeec-cccc--cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-V------EAQHNLVLST-SYAA--HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-~------~~~~~l~~~~-~~~~--~~~~vwiv  531 (639)
                      +|.++|+.   ..|.|+|..|+++|.+|+|  |+++..+.|++.-. .      ....+ +.++ ++++  ++++++|+
T Consensus         1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~-i~~t~dl~~a~~~ad~Iii   75 (157)
T PF01210_consen    1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPEN-IKATTDLEEALEDADIIII   75 (157)
T ss_dssp             EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETT-EEEESSHHHHHTT-SEEEE
T ss_pred             CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcc-cccccCHHHHhCcccEEEe
Confidence            58899998   8999999999999999999  88899999987622 1      11123 3344 4663  77777664

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.63  E-value=0.14  Score=54.29  Aligned_cols=42  Identities=21%  Similarity=0.184  Sum_probs=34.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      .|...++|+++|++|  -||+.+|+.|.++|.+|..  |+.++...
T Consensus         5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~~~   48 (338)
T PLN00198          5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQKK   48 (338)
T ss_pred             cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCHHH
Confidence            366678899999999  9999999999999999854  66554443

>PRK12828 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.1  Score=51.37  Aligned_cols=42  Identities=19%  Similarity=0.119  Sum_probs=34.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |++++.++..++
T Consensus         7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~   50 (239)
T PRK12828          7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG   50 (239)
T ss_pred             CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence            46799999998  9999999999999999888  766655444333

>PRK08628 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.14  Score=51.65  Aligned_cols=43  Identities=14%  Similarity=0.169  Sum_probs=34.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ...+.++++||+|  -||+++|+.|+++|.+|.+  |++++. ++.++
T Consensus         5 l~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~   49 (258)
T PRK08628          5 LKDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE   49 (258)
T ss_pred             cCCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence            3456899999998  9999999999999999988  666655 44343

>PRK08703 short chain dehydrogenase; Provisional

Probab=93.62  E-value=0.093  Score=52.41  Aligned_cols=43  Identities=21%  Similarity=0.270  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l   50 (239)
T PRK08703          6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAI   50 (239)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH
Confidence            36899999998  9999999999999999998  8888888877664

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=93.58  E-value=0.22  Score=54.53  Aligned_cols=140  Identities=14%  Similarity=0.179  Sum_probs=90.3

Q ss_pred             hHHHHHHHHHHHHHHHHcCCcEEEe--ccc-------ccccccccCC---ceeeec-CCCCcce----------------
Q 006607          392 REAINSLIEEAILEADAKGVKVISL--GLL-------NQGEELNRNG---EIYLER-QPNKLKI----------------  442 (639)
Q Consensus       392 ~~~in~~I~~Ai~~A~~~G~kv~~L--G~l-------n~~e~ln~~g---~~~~~k-~p~~L~i----------------  442 (639)
                      ..+-+.-+...++.|++.|++..-.  -.-       +.+++||.|-   ++.++. -|++++.                
T Consensus       114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl  193 (364)
T PLN02616        114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF  193 (364)
T ss_pred             ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence            3445555777788999999986543  222       2236778874   333331 1333431                


Q ss_pred             ------eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHH
Q 006607          443 ------KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK  504 (639)
Q Consensus       443 ------rvv~G--n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~  504 (639)
                            |+..|  +    .-|++.|++-+     +-.-++|+|+|...  -||+-+|..|-++|-.|++ .++-      
T Consensus       194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T------  265 (364)
T PLN02616        194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRT------  265 (364)
T ss_pred             ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCC------
Confidence                  33333  2    45677777655     33688999999997  9999999999999999999 2111      


Q ss_pred             hhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                              .      ++++  +++||+|  +|  +-++++..   ++|+++||+- +.+
T Consensus       266 --------~------nl~~~~r~ADIVIsAvGkp~~i~~d~v---K~GAvVIDVG-In~  306 (364)
T PLN02616        266 --------K------NPEEITREADIIISAVGQPNMVRGSWI---KPGAVVIDVG-INP  306 (364)
T ss_pred             --------C------CHHHHHhhCCEEEEcCCCcCcCCHHHc---CCCCEEEecc-ccc
Confidence                    0      1222  3566766  33  34677666   9999999997 554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.54  E-value=0.18  Score=53.36  Aligned_cols=44  Identities=16%  Similarity=0.117  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|+++  -||+++|+.|+++| .+|.+  |++++.+++++++.
T Consensus         3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~   49 (314)
T TIGR01289         3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG   49 (314)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            45789999997  99999999999999 99988  88888888877764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=93.53  E-value=0.11  Score=56.37  Aligned_cols=91  Identities=18%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeeecCCCCcceeeecCChhHHHHHH---hcCc-CCCcEEEEe
Q 006607          395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV---NSLP-KTTAHVLLR  469 (639)
Q Consensus       395 in~~I~~Ai~~A~~~G~kv~~LG-~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~---~~i~-~~~~~V~~~  469 (639)
                      |=-+|.+|...|.+.|.-=--|. +|++        .+.+.|.-. -+.++-+|..=.++++.   +..+ -+.++|+|+
T Consensus       110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~~--------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvI  180 (338)
T PRK00676        110 IQGQVKRAYLKAARERKLPFALHFLFQK--------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFI  180 (338)
T ss_pred             HHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEE
Confidence            33448889999998885311111 1111        223333322 22444444322222233   3332 257899999


Q ss_pred             cccCchhhHHHHHHHHhccCcE-EEe--cch
Q 006607          470 GTVTANKVANAVASSLCQMGIK-VAT--ICK  497 (639)
Q Consensus       470 Gatg~~kig~ava~~L~~~~~~-v~~--~~~  497 (639)
                      || |  ++|+-+|++|.++|++ +++  |+.
T Consensus       181 Ga-G--em~~l~a~~L~~~g~~~i~v~nRt~  208 (338)
T PRK00676        181 GY-S--EINRKVAYYLQRQGYSRITFCSRQQ  208 (338)
T ss_pred             cc-c--HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            99 5  9999999999999854 666  544

>PRK05875 short chain dehydrogenase; Provisional

Probab=93.51  E-value=0.13  Score=52.56  Aligned_cols=44  Identities=20%  Similarity=0.222  Sum_probs=37.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+.+++++
T Consensus         6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   51 (276)
T PRK05875          6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI   51 (276)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            357899999998  9999999999999999998  7777777666654

>PRK08263 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.12  Score=52.90  Aligned_cols=43  Identities=12%  Similarity=0.079  Sum_probs=37.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.++++++.+
T Consensus         4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~   48 (275)
T PRK08263          4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKYG   48 (275)
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc
Confidence            5799999998  9999999999999999988  88888888776653

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.14  Score=54.31  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=35.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~----------~~~~~~l~~~~  507 (639)
                      .+.|+++|+++  -||+++|+.|+++|.+|.+  |+          +++.+++++++
T Consensus         8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l   62 (305)
T PRK08303          8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELV   62 (305)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHH
Confidence            46899999997  8999999999999999988  65          35666665554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=93.43  E-value=0.17  Score=53.75  Aligned_cols=42  Identities=14%  Similarity=0.107  Sum_probs=33.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+|+|++|  -||+++|+.|+++|  .+|.+  |+..+.+++++++
T Consensus         5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~   50 (324)
T TIGR03589         5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF   50 (324)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh
Confidence            5799999999  99999999999886  67776  5555555565554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08177 short chain dehydrogenase; Provisional

Probab=93.38  E-value=0.11  Score=51.67  Aligned_cols=40  Identities=15%  Similarity=0.183  Sum_probs=34.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+++++
T Consensus         2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~   43 (225)
T PRK08177          2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQA   43 (225)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh
Confidence            5799999998  9999999999999999998  77777666643

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=93.28  E-value=0.16  Score=50.73  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         4 ~~k~vlItGas~--gIG~~ia~~l~~~G~~vi~   34 (248)
T TIGR01832         4 EGKVALVTGANT--GLGQGIAVGLAEAGADIVG   34 (248)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            347899999998  9999999999999999998

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=93.25  E-value=0.13  Score=53.57  Aligned_cols=34  Identities=24%  Similarity=0.204  Sum_probs=29.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ++|+|+|++|  -||+.+++.|.++|.+|..  |+.++
T Consensus         5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            6899999999  9999999999999999876  66554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.24  E-value=0.11  Score=52.13  Aligned_cols=45  Identities=16%  Similarity=0.200  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~   57 (247)
T PRK08945         11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIE   57 (247)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  77777777766643

>PLN02494 adenosylhomocysteinase

Probab=93.21  E-value=0.72  Score=52.35  Aligned_cols=157  Identities=15%  Similarity=0.133  Sum_probs=98.7

Q ss_pred             ceeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee
Q 006607          441 KIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV  516 (639)
Q Consensus       441 ~irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~  516 (639)
                      +-|.=||.|. .-.+++...  ...++|.|+|.-   +||+.+|+.+...|.+|+.  ++..+...-... ..+      
T Consensus       231 Dn~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~-G~~------  299 (477)
T PLN02494        231 DNLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALME-GYQ------  299 (477)
T ss_pred             hccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhc-CCe------
Confidence            3566667775 333444433  256789999987   9999999999999999998  444443221111 111      


Q ss_pred             eeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---------------CCCCCceeecCC----c
Q 006607          517 LSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---------------KLRKDCFYHSTP----A  571 (639)
Q Consensus       517 ~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---------------~~R~dc~y~~~~----a  571 (639)
                       +.++++  +.+++++  .|  ..+..+....+++|++++-++++.+.               +.|..+..-+.+    .
T Consensus       300 -vv~leEal~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~  378 (477)
T PLN02494        300 -VLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSG  378 (477)
T ss_pred             -eccHHHHHhhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCE
Confidence             112332  4566666  33  23578899999999999999985322               222222222221    1


Q ss_pred             cc--cCCCCccccccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607          572 MI--IPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  610 (639)
Q Consensus       572 ~~--~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~  610 (639)
                      +.  --+.+-|+. |-.+.|..+|.-.++--.+-..|-|..
T Consensus       379 i~ll~eGrlvNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~  418 (477)
T PLN02494        379 IIVLAEGRLMNLG-CATGHPSFVMSCSFTNQVIAQLELWNE  418 (477)
T ss_pred             EEEEeCCcccccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence            22  222467787 899999999999888766666666654

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.19  E-value=0.21  Score=50.56  Aligned_cols=44  Identities=27%  Similarity=0.437  Sum_probs=35.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++
T Consensus         8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   54 (258)
T PRK09134          8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI   54 (258)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999976   3456666665553

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.14  Score=51.48  Aligned_cols=44  Identities=23%  Similarity=0.228  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++.
T Consensus         8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~   53 (252)
T PRK07035          8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIV   53 (252)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888887777653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.15  E-value=0.14  Score=50.79  Aligned_cols=43  Identities=19%  Similarity=0.219  Sum_probs=37.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  .||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         5 ~~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (238)
T PRK05786          5 GKKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL   49 (238)
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            35899999998  9999999999999999998  8888887775554

>PLN02427 UDP-apiose/xylose synthase

Probab=93.14  E-value=0.2  Score=54.34  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=33.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~  504 (639)
                      |-+..+|+|+|+||  =||+.+++.|.++ |.+|..  |+.++.+.+.
T Consensus        11 ~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~   56 (386)
T PLN02427         11 PIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKHLL   56 (386)
T ss_pred             cccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhhhh
Confidence            44566899999999  9999999999987 588886  5555555443

>PRK07832 short chain dehydrogenase; Provisional

Probab=93.13  E-value=0.14  Score=52.49  Aligned_cols=42  Identities=14%  Similarity=0.172  Sum_probs=36.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+  |+.+..+++.+++
T Consensus         1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~   44 (272)
T PRK07832          1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADA   44 (272)
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            3689999998  9999999999999999888  7788777776654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.13  E-value=0.29  Score=51.84  Aligned_cols=63  Identities=22%  Similarity=0.168  Sum_probs=46.2

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      |||.-...+.--+..+...++|++.||-|   .|||++-+|++.|. ++.+  |+.+|-++|.+++...
T Consensus       109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~  174 (283)
T PRK14027        109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_pred             CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc
Confidence            66666666553222233457899999986   58999999999987 4556  9999999998876543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=93.12  E-value=0.092  Score=56.33  Aligned_cols=68  Identities=19%  Similarity=0.315  Sum_probs=46.3

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc---ccceeeeccccc-cceeEEEE
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      |...+|.++|| |  .||+++|..|+.+|+  ++.|  +++++.+-...++....   ...-+...++++ ++++|+|+
T Consensus         4 ~~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIi   79 (315)
T PRK00066          4 KQHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVI   79 (315)
T ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEE
Confidence            33459999999 8  999999999998888  5666  66777665555433221   111123334777 89988776

>PRK06953 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.13  Score=50.84  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=35.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.++.+++++
T Consensus         2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~   43 (222)
T PRK06953          2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA   43 (222)
T ss_pred             ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            4689999998  9999999999999999988  77777777764

>PRK06914 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.14  Score=52.29  Aligned_cols=42  Identities=14%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.++++|++|  -||+++|+.|.++|.+|.+  |+.++.+++++++
T Consensus         4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (280)
T PRK06914          4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA   47 (280)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence            5689999998  9999999999999999988  8888887776653

>PRK12827 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.2  Score=49.74  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=34.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe------cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~------~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+      ++++..+++.+++
T Consensus         6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~   54 (249)
T PRK12827          6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI   54 (249)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence            36799999998  9999999999999999877      3455566555553

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.09  E-value=0.14  Score=52.42  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=35.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+.++++
T Consensus         2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~   44 (274)
T PRK05693          2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAAA   44 (274)
T ss_pred             CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC
Confidence            4789999998  9999999999999999988  888887777543

>PRK07985 oxidoreductase; Provisional

Probab=93.06  E-value=0.18  Score=52.85  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~~  506 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  ++  +++.+++++.
T Consensus        49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~   94 (294)
T PRK07985         49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI   94 (294)
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH
Confidence            36899999998  9999999999999999988  32  3455555544

>PLN02650 dihydroflavonol-4-reductase

Probab=93.06  E-value=0.18  Score=53.79  Aligned_cols=42  Identities=17%  Similarity=0.163  Sum_probs=34.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +.++|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.++.
T Consensus         4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~   47 (351)
T PLN02650          4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKVKH   47 (351)
T ss_pred             CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHHHH
Confidence            356899999999  9999999999999999986  66666555443

>PRK12937 short chain dehydrogenase; Provisional

Probab=93.00  E-value=0.23  Score=49.40  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.++++  + ++++.+++.+++
T Consensus         5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~   50 (245)
T PRK12937          5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI   50 (245)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999877  3 344455554443

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.98  E-value=0.17  Score=52.17  Aligned_cols=34  Identities=12%  Similarity=0.221  Sum_probs=29.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.+
T Consensus         6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence            36799999998  9999999999999999988  5543

>PRK12743 oxidoreductase; Provisional

Probab=92.93  E-value=0.2  Score=50.66  Aligned_cols=42  Identities=12%  Similarity=0.179  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++.+++
T Consensus         3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~   47 (256)
T PRK12743          3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEV   47 (256)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence            5799999997  9999999999999999977   4666676666654

>PRK07060 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.19  Score=49.99  Aligned_cols=44  Identities=23%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.++.
T Consensus         8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~   53 (245)
T PRK07060          8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET   53 (245)
T ss_pred             CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            456899999998  9999999999999999988  8888888777654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.91  E-value=0.063  Score=55.26  Aligned_cols=101  Identities=19%  Similarity=0.194  Sum_probs=62.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEEEcCcCChhhhhc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWLVGDDLTGKEQAR  542 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwivg~~~~~~~q~~  542 (639)
                      .|+|+|+||  -||+++++.|.++|.+|..  |+.+....+.        .            -..|+.++..+.+....
T Consensus         2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~------------~~~~~~~d~~~~~~~~~   59 (314)
T COG0451           2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------S------------GVEFVVLDLTDRDLVDE   59 (314)
T ss_pred             eEEEEcCcc--cHHHHHHHHHHhCCCeEEEEeCCCccccccc--------c------------ccceeeecccchHHHHH
Confidence            389999999  9999999999999999998  3333222111        0            01355555555533322


Q ss_pred             CCCCceeecccccCCcCCCCCceeecCCccccCCCCcc----ccccccccCcchhhhHHHHHH
Q 006607          543 APKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSN----MHSCENWLGRRVMSAWRIAGI  601 (639)
Q Consensus       543 a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~----~~~~e~~~pr~~~~Ac~a~~~  601 (639)
                      +..+             .+ |+.++-......+....+    +..-|....+++..||.++++
T Consensus        60 ~~~~-------------~~-d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~  108 (314)
T COG0451          60 LAKG-------------VP-DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV  108 (314)
T ss_pred             HHhc-------------CC-CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2222             11 777777766665555332    444666677777777777443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.87  E-value=0.22  Score=51.06  Aligned_cols=32  Identities=19%  Similarity=0.388  Sum_probs=27.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~   37 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAF   37 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            35799999853247999999999999999988

>TIGR00936 ahcY adenosylhomocysteinase

Probab=92.87  E-value=0.45  Score=53.02  Aligned_cols=157  Identities=13%  Similarity=0.099  Sum_probs=94.7

Q ss_pred             ceeeecCChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee
Q 006607          441 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV  516 (639)
Q Consensus       441 ~irvv~Gnsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~  516 (639)
                      +-|.=+|.|.. -.+.+..  ....++|.|+|.-   .||+.+|+.|...|.+|++  +++.|.......   +.     
T Consensus       172 Dn~yg~g~s~~-~~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~---G~-----  239 (406)
T TIGR00936       172 DNRYGTGQSTI-DGILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMD---GF-----  239 (406)
T ss_pred             hcccccchhHH-HHHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhc---CC-----
Confidence            35566777744 3344433  3456799999976   9999999999999999988  455543322211   11     


Q ss_pred             eeccccc--cceeEEEE----cCcCChhhhhcCCCCceeecccccCCc--------------CCCCCce---eecCCcc-
Q 006607          517 LSTSYAA--HKTKIWLV----GDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCF---YHSTPAM-  572 (639)
Q Consensus       517 ~~~~~~~--~~~~vwiv----g~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~---y~~~~a~-  572 (639)
                      .+.+.++  +.++++|.    -+.++.+....+++|++++-+.+++.+              +.|.-..   .+++-.+ 
T Consensus       240 ~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~  319 (406)
T TIGR00936       240 RVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIY  319 (406)
T ss_pred             EeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEE
Confidence            1223332  56677662    233556677889999999998886541              2332111   1111111 


Q ss_pred             cc-CCCCccccccccccCcchhhhHHHHHHHHHhcCCCC
Q 006607          573 II-PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDL  610 (639)
Q Consensus       573 ~~-P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~  610 (639)
                      .+ -+.+-|+- |..+.|..+|.-.+|-=.+-+++=|.+
T Consensus       320 ll~~GrlvNl~-~~~ghp~~vmd~sfa~q~la~~~l~~~  357 (406)
T TIGR00936       320 LLAEGRLVNLA-AAEGHPSEVMDMSFANQALAAEYLWKN  357 (406)
T ss_pred             EEeCCceeccc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence            11 12355676 888999999977666555555555554

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK09242 tropinone reductase; Provisional

Probab=92.86  E-value=0.14  Score=51.64  Aligned_cols=43  Identities=16%  Similarity=0.231  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++
T Consensus         9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l   53 (257)
T PRK09242          9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDEL   53 (257)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999988  8888888777664

>PLN02686 cinnamoyl-CoA reductase

Probab=92.85  E-value=0.22  Score=54.01  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=35.0

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      ...+.|+|+|++|  -||+++++.|.++|.+|.+  |+.++.++++
T Consensus        51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3567899999999  9999999999999999975  7666665553

>PRK06123 short chain dehydrogenase; Provisional

Probab=92.83  E-value=0.21  Score=49.86  Aligned_cols=42  Identities=19%  Similarity=0.213  Sum_probs=33.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l   47 (248)
T PRK06123          3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI   47 (248)
T ss_pred             CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence            4789999998  9999999999999988877   4555565555543

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.82  E-value=0.21  Score=53.05  Aligned_cols=148  Identities=22%  Similarity=0.262  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-  448 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-  448 (639)
                      .+-+.-+....+.|++.|++..-  |.       +++..+++|.|-   ++.+..= |++++.          +=|||= 
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~  123 (284)
T PRK14190         44 PASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFH  123 (284)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            34555566778889999998754  44       334447788885   3333321 233431          123332 


Q ss_pred             ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       449 ---------------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                     .-|+.+|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++.  .      
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~------  193 (284)
T PRK14190        124 PINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--K------  193 (284)
T ss_pred             HhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--h------
Confidence                           24666666543     44688999999998  9999999999999999998 2111  1      


Q ss_pred             Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  566 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  566 (639)
                                  ++++  +.++|+|  +|  +.++++..   ++|+++||+. +++.   ++--|+-+
T Consensus       194 ------------~l~~~~~~ADIvI~AvG~p~~i~~~~i---k~gavVIDvG-i~~~~~gkl~GDvd~  245 (284)
T PRK14190        194 ------------NLAELTKQADILIVAVGKPKLITADMV---KEGAVVIDVG-VNRLENGKLCGDVDF  245 (284)
T ss_pred             ------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-ccccCCCCeeccCcH
Confidence                        1221  3556655  33  35777777   9999999998 6652   44456553

>PRK08291 ectoine utilization protein EutC; Validated

Probab=92.81  E-value=0.29  Score=52.67  Aligned_cols=103  Identities=13%  Similarity=0.076  Sum_probs=65.3

Q ss_pred             ecCChhHHH-----HHH--hcC-cCCCcEEEEecccCchhhHHHHHHHHhc-cC-cEEEe--cchhhHHHHHhhCCcccc
Q 006607          445 VDGSSLAAA-----VVV--NSL-PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQ  512 (639)
Q Consensus       445 v~Gnsltaa-----~v~--~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~-~~-~~v~~--~~~~~~~~l~~~~~~~~~  512 (639)
                      .+|+.+|+.     ..+  ... +++.++|.++|+-   ..|++.+.+|+. ++ .+|.+  |++++.+++.+++.++.+
T Consensus       106 ~d~~~lt~~rT~a~~~~a~~~la~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g  182 (330)
T PRK08291        106 LDNGYLTDVRTAAAGAVAARHLAREDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELG  182 (330)
T ss_pred             cCCchHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccC
Confidence            378777641     221  112 5567899999997   679999999983 55 45666  999999999988654433


Q ss_pred             cceeeeccccc--cceeEEEE----cCc-CChhhhhcCCCCceeeccc
Q 006607          513 HNLVLSTSYAA--HKTKIWLV----GDD-LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       513 ~~l~~~~~~~~--~~~~vwiv----g~~-~~~~~q~~a~~G~~f~~~~  553 (639)
                      .......++++  +++++++.    .+. ++.+   +.++|+++..+.
T Consensus       183 ~~v~~~~d~~~al~~aDiVi~aT~s~~p~i~~~---~l~~g~~v~~vg  227 (330)
T PRK08291        183 IPVTVARDVHEAVAGADIIVTTTPSEEPILKAE---WLHPGLHVTAMG  227 (330)
T ss_pred             ceEEEeCCHHHHHccCCEEEEeeCCCCcEecHH---HcCCCceEEeeC
Confidence            33122334553  77777662    222 2332   347888877653

>PRK06128 oxidoreductase; Provisional

Probab=92.78  E-value=0.19  Score=52.54  Aligned_cols=30  Identities=20%  Similarity=0.344  Sum_probs=28.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus        55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i   84 (300)
T PRK06128         55 GRKALITGADS--GIGRATAIAFAREGADIAL   84 (300)
T ss_pred             CCEEEEecCCC--cHHHHHHHHHHHcCCEEEE
Confidence            46899999998  9999999999999999988

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.77  E-value=0.26  Score=52.84  Aligned_cols=161  Identities=24%  Similarity=0.307  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns  449 (639)
                      ++-+.-+..-++.|++.|++..  -|.       +++..+++|.|-   ++.++. -|++++.          +=|||=+
T Consensus        45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~  124 (301)
T PRK14194         45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH  124 (301)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence            3455556677778899998764  443       334446688775   333331 1222331          1244433


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~~  507 (639)
                                      -|++.|++=+     +-.-++|.++|..|  -+|+.+|..|.++|..|++- ++.+        
T Consensus       125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~--------  194 (301)
T PRK14194        125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRST--------  194 (301)
T ss_pred             hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCC--------
Confidence                            3666666544     34688999999998  99999999999999999992 1111        


Q ss_pred             Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc------CCCCCceeec-----CC
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR------KLRKDCFYHS-----TP  570 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~------~~R~dc~y~~-----~~  570 (639)
                                  ++++  +.++|+|  +|+  .++++   ++++|+++||++ +++.      ++.-|+-+.+     ..
T Consensus       195 ------------~l~e~~~~ADIVIsavg~~~~v~~~---~ik~GaiVIDvg-in~~~~~g~~kl~GDvdf~~~~~~a~~  258 (301)
T PRK14194        195 ------------DAKALCRQADIVVAAVGRPRLIDAD---WLKPGAVVIDVG-INRIDDDGRSRLVGDVDFDSALPVVSA  258 (301)
T ss_pred             ------------CHHHHHhcCCEEEEecCChhcccHh---hccCCcEEEEec-ccccCCCCCcceecccchHHHHhhcce
Confidence                        1221  3455544  444  34433   469999999999 5542      3346665432     11


Q ss_pred             ccccCCCCc
Q 006607          571 AMIIPPSLS  579 (639)
Q Consensus       571 a~~~P~~~~  579 (639)
                      ...||+.+-
T Consensus       259 iTPVPGGVG  267 (301)
T PRK14194        259 ITPVPGGVG  267 (301)
T ss_pred             ecCCCCchh
Confidence            234676544

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=92.76  E-value=0.19  Score=50.96  Aligned_cols=31  Identities=16%  Similarity=0.298  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+++|+++  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~   37 (251)
T PRK12481          7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG   37 (251)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            347899999997  9999999999999999998

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=92.75  E-value=0.24  Score=49.28  Aligned_cols=41  Identities=24%  Similarity=0.169  Sum_probs=33.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~  506 (639)
                      +.|+++|++|  -||+++++.|+++|.+|.+   |++++.+++.++
T Consensus         2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~   45 (247)
T PRK09730          2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL   45 (247)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH
Confidence            4689999998  9999999999999999865   666666655554

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.62  E-value=0.39  Score=51.00  Aligned_cols=141  Identities=18%  Similarity=0.254  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  442 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  442 (639)
                      .+-+.-+...++.|++.|++..-  |-       ++...++||.|-   ++.++.= |++++.                 
T Consensus        38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~  117 (279)
T PRK14178         38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH  117 (279)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455566778889999998744  42       344447788875   3344321 333431                 


Q ss_pred             -----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          443 -----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       443 -----rvv~Gn----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                           |+..|+    .-|++.|++=+     +-.-++|.++|...  -+|+.+|..|.++|-.|++ .++.  ..|++.+
T Consensus       118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t--~~L~~~~  193 (279)
T PRK14178        118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKT--ENLKAEL  193 (279)
T ss_pred             hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecCh--hHHHHHH
Confidence                 122232    34666666544     33679999999997  9999999999999999998 2211  1111110


Q ss_pred             CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                      ++++++|  +|  +.++++..   ++|++++|++ ++.
T Consensus       194 ----------------~~ADIvI~Avgk~~lv~~~~v---k~GavVIDVg-i~~  227 (279)
T PRK14178        194 ----------------RQADILVSAAGKAGFITPDMV---KPGATVIDVG-INQ  227 (279)
T ss_pred             ----------------hhCCEEEECCCcccccCHHHc---CCCcEEEEee-ccc
Confidence                            3566666  44  44666665   9999999999 665

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=92.61  E-value=0.22  Score=48.73  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=58.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|..   .||+++|+.|..-|.+|..  ++.+.-+...+ ..       +...++++  +.++++++      
T Consensus        35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~-------~~~~~l~ell~~aDiv~~~~plt~  103 (178)
T PF02826_consen   35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FG-------VEYVSLDELLAQADIVSLHLPLTP  103 (178)
T ss_dssp             TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TT-------EEESSHHHHHHH-SEEEE-SSSST
T ss_pred             CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhccc-cc-------ceeeehhhhcchhhhhhhhhcccc
Confidence            46789999986   9999999999999999999  33332221111 11       12234544  55666551      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                        -..|+.++..++|+|++|+-++|   |+.+
T Consensus       104 ~T~~li~~~~l~~mk~ga~lvN~aRG~~vde~  135 (178)
T PF02826_consen  104 ETRGLINAEFLAKMKPGAVLVNVARGELVDED  135 (178)
T ss_dssp             TTTTSBSHHHHHTSTTTEEEEESSSGGGB-HH
T ss_pred             ccceeeeeeeeeccccceEEEeccchhhhhhh
Confidence              35688899999999999999998   5554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07904 short chain dehydrogenase; Provisional

Probab=92.59  E-value=0.15  Score=52.07  Aligned_cols=44  Identities=14%  Similarity=0.227  Sum_probs=36.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhh-HHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDD-YEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~-~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++| .+|.+  |+.++ ++++.+++.
T Consensus         8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~   55 (253)
T PRK07904          8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMK   55 (253)
T ss_pred             CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHH
Confidence            34799999998  99999999999885 89888  77775 777766643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=92.59  E-value=0.16  Score=51.55  Aligned_cols=39  Identities=18%  Similarity=0.242  Sum_probs=33.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      .++|+++||+|  .||+++++.|.++|.+|+.  |+.++.+++
T Consensus        17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~   57 (251)
T PLN00141         17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS   57 (251)
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence            56899999999  9999999999999999876  777776544

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=92.58  E-value=0.19  Score=45.99  Aligned_cols=98  Identities=11%  Similarity=0.104  Sum_probs=54.3

Q ss_pred             EEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchh-hHHHHHhhCCcccccceeeecc--ccc-cceeEEE--EcCcC
Q 006607          465 HVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLKLRIPVEAQHNLVLSTS--YAA-HKTKIWL--VGDDL  535 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~~-~~~~l~~~~~~~~~~~l~~~~~--~~~-~~~~vwi--vg~~~  535 (639)
                      +|.++||||  -+|+.+++.|. .....+..  .+++ .-+.+....+.-.+..-+.+.+  .++ .++++++  .++..
T Consensus         1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~   78 (121)
T PF01118_consen    1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA   78 (121)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred             CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence            589999999  99999999999 55666555  2333 2233333322111111122222  223 7778876  33332


Q ss_pred             Chh-hhhcCCCCceeecccccCCc-CCCCCceee
Q 006607          536 TGK-EQARAPKGTIFIPYTQIPPR-KLRKDCFYH  567 (639)
Q Consensus       536 ~~~-~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~  567 (639)
                      +.+ ..+-+++|..++|.|   .. ++.+||.|.
T Consensus        79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~  109 (121)
T PF01118_consen   79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG  109 (121)
T ss_dssp             HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred             HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence            222 222248999888887   22 344566664

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=92.58  E-value=0.21  Score=49.20  Aligned_cols=39  Identities=18%  Similarity=0.333  Sum_probs=31.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +|.|+|+ |  .+|+.||..+++.|.+|++  ++++.+++.+++
T Consensus         1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            5899999 4  9999999999999999999  777766655444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.57  E-value=0.25  Score=49.53  Aligned_cols=29  Identities=21%  Similarity=0.335  Sum_probs=27.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~   31 (256)
T PRK12745          3 PVALVTGGRR--GIGLGIARALAAAGFDLAI   31 (256)
T ss_pred             cEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            5799999998  9999999999999999988

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.53  E-value=0.43  Score=52.73  Aligned_cols=85  Identities=18%  Similarity=0.210  Sum_probs=57.6

Q ss_pred             HHcCCcEEEecccccccccccCCceeeecCCCCcceeeecCChhHH----------HHHHhcCcCCCcEEEEecccCchh
Q 006607          407 DAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAA----------AVVVNSLPKTTAHVLLRGTVTANK  476 (639)
Q Consensus       407 ~~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~irvv~Gnslta----------a~v~~~i~~~~~~V~~~Gatg~~k  476 (639)
                      .+.|+.|+++-  .       +|. .+  .|. -+.++-.|+.+.+          ...+...+...++|+++|. |  +
T Consensus       178 ~~~~~~vi~i~--r-------~~~-~~--~p~-~~~~l~~gD~l~v~g~~~~l~~~~~~~~~~~~~~~~iiIiG~-G--~  241 (453)
T PRK09496        178 PDIDVRVVAIF--R-------GGR-LI--IPR-GDTVIEAGDEVYFIGAREHIRAVMSEFGRLEKPVKRVMIVGG-G--N  241 (453)
T ss_pred             CCCceEEEEEE--E-------CCE-EE--cCC-CCcEecCCCEEEEEeCHHHHHHHHHHhCccCCCCCEEEEECC-C--H
Confidence            35788888763  1       222 22  244 4444444444433          2223333335789999999 5  9


Q ss_pred             hHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          477 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       477 ig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +|+.+++.|.++|.+|++  +++++.++++++.
T Consensus       242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~  274 (453)
T PRK09496        242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEEL  274 (453)
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence            999999999999999998  8888999888764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=92.47  E-value=0.15  Score=53.34  Aligned_cols=32  Identities=22%  Similarity=0.209  Sum_probs=27.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC--cEEEe--cchh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD  498 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~  498 (639)
                      .|+|+||||  -||+.+++.|.++|  .+|..  |+.+
T Consensus         1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            489999999  99999999999988  56666  6554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK06198 short chain dehydrogenase; Provisional

Probab=92.47  E-value=0.26  Score=49.61  Aligned_cols=43  Identities=14%  Similarity=0.191  Sum_probs=35.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+ |.+  |+.++.+.+.+++
T Consensus         6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l   51 (260)
T PRK06198          6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL   51 (260)
T ss_pred             CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence            46799999998  8999999999999999 777  7766666555443

>PRK08264 short chain dehydrogenase; Validated

Probab=92.46  E-value=0.16  Score=50.48  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=32.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEK  502 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~  502 (639)
                      .+.|+++|++|  .||+++|+.|+++|. +|++  |+.++.++
T Consensus         6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~   46 (238)
T PRK08264          6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVTD   46 (238)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhhh
Confidence            46799999998  999999999999998 8888  66665543

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=92.44  E-value=0.69  Score=47.49  Aligned_cols=79  Identities=18%  Similarity=0.123  Sum_probs=47.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCCc--ccccceeeecc--cccc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPV--EAQHNLVLSTS--YAAH  524 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-~--~----------~~~~~~~l~~~~~~--~~~~~l~~~~~--~~~~  524 (639)
                      ..++|++.|- |  +||+.+|+.|.+.|.+|+ +  .          +.+++.+++++-..  +.... ..+..  +-+.
T Consensus        30 ~~~~v~I~G~-G--~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~-~~~~~~~i~~~  105 (227)
T cd01076          30 AGARVAIQGF-G--NVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGA-ERITNEELLEL  105 (227)
T ss_pred             cCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCc-eecCCccceee
Confidence            4679999994 6  999999999999999999 5  2          44555555554211  11000 00111  1114


Q ss_pred             ceeEEE---EcCcCChhhhhcCC
Q 006607          525 KTKIWL---VGDDLTGKEQARAP  544 (639)
Q Consensus       525 ~~~vwi---vg~~~~~~~q~~a~  544 (639)
                      +|+|.|   .++.|+++...+.+
T Consensus       106 ~~Dvlip~a~~~~i~~~~~~~l~  128 (227)
T cd01076         106 DCDILIPAALENQITADNADRIK  128 (227)
T ss_pred             cccEEEecCccCccCHHHHhhce
Confidence            667766   56666666665443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.43  E-value=0.27  Score=48.95  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++.+.+.+++
T Consensus         5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~   49 (253)
T PRK08217          5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC   49 (253)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            45799999998  9999999999999999988  7777777776654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.42  E-value=0.24  Score=50.70  Aligned_cols=43  Identities=14%  Similarity=0.109  Sum_probs=32.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~  506 (639)
                      +.++++|+++++-||+|+|+.|+++|.+|.+  |+.   +..++++++
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~   56 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE   56 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh
Confidence            5789999995335999999999999999988  542   234445444

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.40  E-value=0.31  Score=48.36  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=35.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  .||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus         5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~   50 (247)
T PRK05565          5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI   50 (247)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            35799999998  9999999999999999877   5566666655553

>PRK06484 short chain dehydrogenase; Validated

Probab=92.37  E-value=0.29  Score=54.99  Aligned_cols=46  Identities=13%  Similarity=0.143  Sum_probs=40.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.++++|+++  -||+++|+.|.++|.+|.+  |+.++++++.++++.
T Consensus         4 ~~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (520)
T PRK06484          4 QSRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP   51 (520)
T ss_pred             CCeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            346889999997  9999999999999999988  899999988887654

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.31  E-value=0.73  Score=49.29  Aligned_cols=140  Identities=15%  Similarity=0.210  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHHHHHHHHcCCcE--EEeccccc-------ccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006607          392 REAINSLIEEAILEADAKGVKV--ISLGLLNQ-------GEELNRNG---EIYLERQ-PNKLKI----------KVVDGS  448 (639)
Q Consensus       392 ~~~in~~I~~Ai~~A~~~G~kv--~~LG~ln~-------~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn  448 (639)
                      ..+-+.-+....+.|++.|++.  +-|..-.+       ++++|.|-   ++.++.= |.+++.          +=|||=
T Consensus        42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl  121 (293)
T PRK14185         42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF  121 (293)
T ss_pred             CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence            3445555777788999999998  55554332       25788875   3344321 333432          123332


Q ss_pred             h----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHH
Q 006607          449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEK  502 (639)
Q Consensus       449 s----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~  502 (639)
                      +                -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++    +..|++ .++-    
T Consensus       122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T----  195 (293)
T PRK14185        122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRS----  195 (293)
T ss_pred             CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCC----
Confidence            2                2777776644     44678999999997  9999999999988    678888 2111    


Q ss_pred             HHhhCCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607          503 LKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       503 l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                .      ++++  +.++|+|  +|+  .++++..   ++|+++||+. +.+
T Consensus       196 ----------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~  236 (293)
T PRK14185        196 ----------K------NLKKECLEADIIIAALGQPEFVKADMV---KEGAVVIDVG-TTR  236 (293)
T ss_pred             ----------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence                      1      1222  3566666  443  4666555   9999999998 654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=92.31  E-value=0.24  Score=50.63  Aligned_cols=32  Identities=19%  Similarity=0.317  Sum_probs=27.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~   37 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI   37 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999973248999999999999999987

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.29  E-value=0.3  Score=51.46  Aligned_cols=44  Identities=18%  Similarity=0.247  Sum_probs=35.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      +.+.++++|++|  -||+++|+.|+++|.+|.+  + +.++.+++.+++
T Consensus        11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i   57 (306)
T PRK07792         11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI   57 (306)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence            456899999998  9999999999999999998  3 345566665554

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.27  E-value=0.22  Score=51.50  Aligned_cols=35  Identities=20%  Similarity=0.258  Sum_probs=29.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      .+.++++|+++++-||+|+|+.|+++|.+|.+  |++
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~   43 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE   43 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence            46799999994236999999999999999998  554

>PLN02214 cinnamoyl-CoA reductase

Probab=92.27  E-value=0.32  Score=52.12  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus        10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214         10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            45799999999  9999999999999999987  65554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=92.25  E-value=0.3  Score=49.56  Aligned_cols=44  Identities=18%  Similarity=0.190  Sum_probs=34.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  | +++..+++.+++
T Consensus         6 ~~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l   52 (261)
T PRK08936          6 EGKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI   52 (261)
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999987  4 444555555543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=92.24  E-value=0.23  Score=55.01  Aligned_cols=88  Identities=17%  Similarity=0.143  Sum_probs=60.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeecc---ccc--cceeEEE--EcC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL--VGD  533 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~---~~~--~~~~vwi--vg~  533 (639)
                      ..|++.|+ |  .||+++|..|+++| .+|++  |+.+...+++.....+.+-..+.+..   +.+  ++.+++|  +.-
T Consensus         2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~   78 (389)
T COG1748           2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP   78 (389)
T ss_pred             CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence            47899999 7  99999999999998 89998  99999999988753333222233443   333  5567766  222


Q ss_pred             cCChhh-hhcCCCCceeecccc
Q 006607          534 DLTGKE-QARAPKGTIFIPYTQ  554 (639)
Q Consensus       534 ~~~~~~-q~~a~~G~~f~~~~~  554 (639)
                      ..+..= +.=++.|++++|.|-
T Consensus        79 ~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          79 FVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             hhhHHHHHHHHHhCCCEEEccc
Confidence            222211 234578999999995

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=92.24  E-value=0.3  Score=51.35  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=38.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.++++|++.  -||+|+|+.|++.|-+|.+  |++|+.++.++++
T Consensus         7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~   52 (270)
T KOG0725|consen    7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQEL   52 (270)
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            356788999996  8999999999999999999  9999988887763

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=92.23  E-value=0.26  Score=51.75  Aligned_cols=39  Identities=18%  Similarity=0.129  Sum_probs=32.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      .+.|+++|++|  -||+++++.|.++|.+|.+  |+.++.++.
T Consensus         5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (325)
T PLN02989          5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDRKKT   45 (325)
T ss_pred             CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcchhhH
Confidence            36899999999  9999999999999999876  666554443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=92.19  E-value=0.24  Score=50.09  Aligned_cols=44  Identities=16%  Similarity=0.251  Sum_probs=37.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.++.+  |+.++.+++.+++
T Consensus        10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l   55 (255)
T PRK06113         10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI   55 (255)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            457899999998  9999999999999999988  7777777776654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.18  E-value=0.21  Score=51.15  Aligned_cols=46  Identities=17%  Similarity=0.277  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+     |++++.+++.++.+
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~   56 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG   56 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC
Confidence            46799999753247999999999999999987     33566666666543

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.17  E-value=0.15  Score=53.77  Aligned_cols=88  Identities=15%  Similarity=0.141  Sum_probs=56.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc-------------cc---ccceeeec-cccc-
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------------EA---QHNLVLST-SYAA-  523 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-------------~~---~~~l~~~~-~~~~-  523 (639)
                      ++|.++|+-   .+|+.+|..|++.|.+|++  ++++.+++.++++..             +.   ....+..+ ++++ 
T Consensus         6 ~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~   82 (286)
T PRK07819          6 QRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF   82 (286)
T ss_pred             cEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence            579999995   9999999999999999999  788877763322111             10   01112223 4655 


Q ss_pred             cceeEEE--EcCcCChh-----hhhcC--CCCceeecccc
Q 006607          524 HKTKIWL--VGDDLTGK-----EQARA--PKGTIFIPYTQ  554 (639)
Q Consensus       524 ~~~~vwi--vg~~~~~~-----~q~~a--~~G~~f~~~~~  554 (639)
                      ++++++|  |-+.++-+     +..++  ++|++++.-+-
T Consensus        83 ~~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS  122 (286)
T PRK07819         83 ADRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS  122 (286)
T ss_pred             CCCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            7887766  32332222     12243  88998887665

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=92.15  E-value=0.21  Score=53.27  Aligned_cols=47  Identities=13%  Similarity=0.199  Sum_probs=38.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~  508 (639)
                      ..+.++++|+.+.+-||+|+|+.|+++|-+|.+ |+.+++++++.++.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~   55 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR   55 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence            456899999931148999999999999999999 88899988876654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.14  E-value=0.32  Score=49.67  Aligned_cols=45  Identities=22%  Similarity=0.305  Sum_probs=35.7

Q ss_pred             CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCCc
Q 006607          463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~~~~  509 (639)
                      .+.++++|+  ++  -||+++|+.|+++|.+|.+  |++  +..++++++++.
T Consensus         7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~   57 (256)
T PRK07889          7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE   57 (256)
T ss_pred             CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence            357899999  54  8999999999999999998  443  556777776643

>PRK07023 short chain dehydrogenase; Provisional

Probab=92.14  E-value=0.29  Score=48.94  Aligned_cols=33  Identities=24%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..|+++|++|  -||+++|+.|+++|.+|++  |+.+
T Consensus         2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~   36 (243)
T PRK07023          2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH   36 (243)
T ss_pred             ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence            3689999998  9999999999999999988  5544

>PRK06841 short chain dehydrogenase; Provisional

Probab=92.11  E-value=0.25  Score=49.68  Aligned_cols=36  Identities=19%  Similarity=0.306  Sum_probs=31.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ..+.|+++|++|  .||+++|+.|+++|.+|.+  |+.+.
T Consensus        14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~   51 (255)
T PRK06841         14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV   51 (255)
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            356899999998  9999999999999999998  65543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=92.07  E-value=0.24  Score=50.56  Aligned_cols=43  Identities=16%  Similarity=0.296  Sum_probs=36.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      ..|+++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++.
T Consensus         2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~   47 (267)
T TIGR02685         2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELN   47 (267)
T ss_pred             CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHH
Confidence            4689999998  8999999999999999988   45677777766654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=92.04  E-value=0.27  Score=56.93  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=38.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus       371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~  415 (657)
T PRK07201        371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI  415 (657)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888887764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=91.98  E-value=0.2  Score=50.77  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=37.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhHHHHHhhCCc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .|+++|+++  -||+++|+.|++    +|.+|.+  |++++.+++++++..
T Consensus         2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~   50 (256)
T TIGR01500         2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA   50 (256)
T ss_pred             EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence            578999997  999999999997    7999988  888999888877543

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.94  E-value=0.25  Score=50.60  Aligned_cols=46  Identities=17%  Similarity=0.232  Sum_probs=36.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---chhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---CKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~---~~~~~~~l~~~~~  508 (639)
                      .+.++++|+++.+-||+++|+.|+++|.+|.+  |   ++++++++++++.
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~   57 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE   57 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence            46789999971027999999999999999998  3   2467788877764

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.89  E-value=0.26  Score=51.67  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=60.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc----------------cceeeec-ccc-c
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ----------------HNLVLST-SYA-A  523 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~----------------~~l~~~~-~~~-~  523 (639)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++.+++++++.....                ...+..+ +++ +
T Consensus         2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            479999995   9999999999999999999  888888887654221100                0012223 465 3


Q ss_pred             -cceeEEE--EcCcCChh-----h-hhcCCCCcee-ecccccCCc
Q 006607          524 -HKTKIWL--VGDDLTGK-----E-QARAPKGTIF-IPYTQIPPR  558 (639)
Q Consensus       524 -~~~~vwi--vg~~~~~~-----~-q~~a~~G~~f-~~~~~~~~~  558 (639)
                       ++++++|  +.+..+-+     + ...+++|+++ ++-|-+|+.
T Consensus        79 ~~~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~~~~  123 (288)
T PRK09260         79 VADADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTMSPT  123 (288)
T ss_pred             hcCCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCCCHH
Confidence             7787766  33332211     1 1246889866 677777877

>PRK07069 short chain dehydrogenase; Validated

Probab=91.83  E-value=0.2  Score=50.08  Aligned_cols=41  Identities=20%  Similarity=0.331  Sum_probs=35.0

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIP  508 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~  508 (639)
                      |+++|++|  -||+++|+.|+++|.+|.+  |+ .++++.+++++.
T Consensus         2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~   45 (251)
T PRK07069          2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN   45 (251)
T ss_pred             EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence            79999998  9999999999999999988  65 677777776643

>PRK06114 short chain dehydrogenase; Provisional

Probab=91.83  E-value=0.4  Score=48.49  Aligned_cols=44  Identities=20%  Similarity=0.279  Sum_probs=34.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~  507 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+  |+. +..+++.+++
T Consensus         7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l   53 (254)
T PRK06114          7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI   53 (254)
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            346899999998  9999999999999999998  543 3455554443

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=91.81  E-value=0.19  Score=53.18  Aligned_cols=102  Identities=15%  Similarity=0.170  Sum_probs=68.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc----
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD----  534 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~----  534 (639)
                      +|.++|..   .+|.++|+.|.+.|.+|.+  |++++.++++++- ..      ..++.++  ++++++|  +-+.    
T Consensus         3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-~~------~~~s~~~~~~~aDvVi~~vp~~~~~~   72 (296)
T PRK15461          3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-AT------PAASPAQAAAGAEFVITMLPNGDLVR   72 (296)
T ss_pred             eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-Cc------ccCCHHHHHhcCCEEEEecCCHHHHH
Confidence            58888866   9999999999999999998  8888888887651 10      1223332  5565544  2111    


Q ss_pred             --CChh-h-hhcCCCCceeecccccCCcCC--------CCCceeecCCccccCC
Q 006607          535 --LTGK-E-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMIIPP  576 (639)
Q Consensus       535 --~~~~-~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~~P~  576 (639)
                        +... . ...+++|+++++.|.++|...        .+.+.|.+.|.+..|.
T Consensus        73 ~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~  126 (296)
T PRK15461         73 SVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSD  126 (296)
T ss_pred             HHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHH
Confidence              1111 1 123589999999999988722        1567788888877665

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=91.76  E-value=0.21  Score=54.06  Aligned_cols=39  Identities=18%  Similarity=0.156  Sum_probs=34.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      +.+.|+|+||+|  =||+.|+..|-++|..|.-  |++++-++
T Consensus         5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~   45 (327)
T KOG1502|consen    5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK   45 (327)
T ss_pred             CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence            678999999999  9999999999999999987  88887433

>PRK06179 short chain dehydrogenase; Provisional

Probab=91.75  E-value=0.2  Score=50.99  Aligned_cols=36  Identities=19%  Similarity=0.235  Sum_probs=30.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus         5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~   42 (270)
T PRK06179          5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARAA   42 (270)
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhcc
Confidence            5799999998  9999999999999999998  6655443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.74  E-value=0.34  Score=51.58  Aligned_cols=146  Identities=27%  Similarity=0.326  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh-
Q 006607          394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS-  449 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns-  449 (639)
                      +-+.-+...++.|++.|++..-.  .       .+...++||.|-   ++.++.= |++++.          +=|||=+ 
T Consensus        45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~  124 (285)
T PRK14189         45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV  124 (285)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence            44455667777899999887543  2       233346788875   3333311 233441          2245543 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607          450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  508 (639)
Q Consensus       450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~  508 (639)
                                     -|+..|++=+     +-..++|.++|.++  -||+-+|..|.++|..|++ .++           
T Consensus       125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~-----------  191 (285)
T PRK14189        125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSK-----------  191 (285)
T ss_pred             hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCC-----------
Confidence                           3666666543     44688999999997  8899999999999999998 211           


Q ss_pred             cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607          509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  565 (639)
Q Consensus       509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  565 (639)
                         ..      ++++  ++++++|  +|  ..++++.   .++|+++||+. +++.   ++--|+-
T Consensus       192 ---t~------~l~~~~~~ADIVV~avG~~~~i~~~~---ik~gavVIDVG-in~~~~gkl~GDVd  244 (285)
T PRK14189        192 ---TR------DLAAHTRQADIVVAAVGKRNVLTADM---VKPGATVIDVG-MNRDDAGKLCGDVD  244 (285)
T ss_pred             ---CC------CHHHHhhhCCEEEEcCCCcCccCHHH---cCCCCEEEEcc-ccccCCCCeeCCcc
Confidence               00      1221  3555655  33  2456544   49999999998 6652   4445554

>PRK08219 short chain dehydrogenase; Provisional

Probab=91.72  E-value=0.24  Score=48.56  Aligned_cols=41  Identities=15%  Similarity=0.243  Sum_probs=34.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.++|+|++|  .||+++|+.|+++ .+|..  |+.++.++++++.
T Consensus         4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~   46 (227)
T PRK08219          4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL   46 (227)
T ss_pred             CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence            5799999998  9999999999988 88887  8888877776543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=91.68  E-value=0.9  Score=45.58  Aligned_cols=147  Identities=13%  Similarity=0.173  Sum_probs=85.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE---EcCcCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  536 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~  536 (639)
                      ..++|.+.|..   ++|+++|+.|.+.|.+|+.  ++.++.++++++...+.    +....+-+.+++|.+   .|..|+
T Consensus        27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~----v~~~~l~~~~~Dv~vp~A~~~~I~   99 (200)
T cd01075          27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV----VAPEEIYSVDADVFAPCALGGVIN   99 (200)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EcchhhccccCCEEEecccccccC
Confidence            45789999995   9999999999999999999  77778888877653211    111111114677766   567889


Q ss_pred             hhhhhcCCCCceeecccccCCc-CCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHHHhc---CCCCCc
Q 006607          537 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALE---GWDLNE  612 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alE---gw~~~e  612 (639)
                      ++...+++.. .++.-+. .|- ..+.|=...+.+++-+|+-+-|-.                 |++..--   |..+.|
T Consensus       100 ~~~~~~l~~~-~v~~~AN-~~~~~~~~~~~L~~~Gi~~~Pd~~~NaG-----------------Gv~~~~~e~~~~~~~~  160 (200)
T cd01075         100 DDTIPQLKAK-AIAGAAN-NQLADPRHGQMLHERGILYAPDYVVNAG-----------------GLINVADELYGGNEAR  160 (200)
T ss_pred             HHHHHHcCCC-EEEECCc-CccCCHhHHHHHHHCCCEEeCceeeeCc-----------------CceeehhHHhCCcHHH
Confidence            9888777644 3444432 111 122222233444455554322111                 1111000   101223


Q ss_pred             cch-h---hhhHHHHHHHHHhcCCcc
Q 006607          613 CGQ-T---MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       613 ~G~-i---v~~i~~iw~aa~kHGF~p  634 (639)
                      .-+ +   .+.+.+|++.|.++|-.|
T Consensus       161 ~~~~~~~~~~~~~~v~~~a~~~~~~~  186 (200)
T cd01075         161 VLAKVEAIYDTLLEIFAQAKQDGITT  186 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            323 2   588999999999998765

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=91.67  E-value=0.35  Score=48.79  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=33.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++ ..+++.+++
T Consensus         8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~   51 (260)
T PRK12823          8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL   51 (260)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence            46799999998  9999999999999999988  543 344454443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.61  E-value=0.27  Score=49.62  Aligned_cols=42  Identities=21%  Similarity=0.374  Sum_probs=33.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~  506 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   ++++..++++++
T Consensus         7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~   51 (255)
T PRK06463          7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELREK   51 (255)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC
Confidence            46899999998  9999999999999999987   344555556543

>PLN03139 formate dehydrogenase; Provisional

Probab=91.59  E-value=0.11  Score=57.59  Aligned_cols=99  Identities=14%  Similarity=0.201  Sum_probs=65.3

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----  531 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----  531 (639)
                      -..++|.++|. |  .||+++|+.|..-|.+|..  ++..+-+ ..++.+..      ...++++  +.++++++     
T Consensus       197 L~gktVGIVG~-G--~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~------~~~~l~ell~~sDvV~l~lPlt  266 (386)
T PLN03139        197 LEGKTVGTVGA-G--RIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAK------FEEDLDAMLPKCDVVVINTPLT  266 (386)
T ss_pred             CCCCEEEEEee-c--HHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCce------ecCCHHHHHhhCCEEEEeCCCC
Confidence            35678999995 5  9999999999999999988  3221111 11111111      1234554  56766552     


Q ss_pred             ---cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607          532 ---GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  569 (639)
Q Consensus       532 ---g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  569 (639)
                         -..++.+...++++|+.++.++|   ++.+         +++   -|++.++-
T Consensus       267 ~~T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EP  322 (386)
T PLN03139        267 EKTRGMFNKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQP  322 (386)
T ss_pred             HHHHHHhCHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCC
Confidence               23356778899999999999999   4433         444   68887774

>PRK05855 short chain dehydrogenase; Validated

Probab=91.52  E-value=0.37  Score=54.12  Aligned_cols=44  Identities=18%  Similarity=0.214  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ...++++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus       315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~  360 (582)
T PRK05855        315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR  360 (582)
T ss_pred             CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46789999998  9999999999999999988  88888888776653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=91.50  E-value=0.32  Score=48.36  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=31.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      |+++|++|  -||+++|+.|+++|.+|.+   +++++.+.+.+++
T Consensus         1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l   43 (239)
T TIGR01831         1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI   43 (239)
T ss_pred             CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            58999997  9999999999999999877   3345555555543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=91.35  E-value=0.41  Score=41.37  Aligned_cols=58  Identities=17%  Similarity=0.239  Sum_probs=44.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC---cEEEe---cchhhHHHHHhhCCcccccceeeec-ccc-c-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPVEAQHNLVLST-SYA-A-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~---~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~-~~~-~-~~~~vwiv  531 (639)
                      +|.++|+-   ++|.|+++.|.+.|   .+|.+   |++|+.++++++.+.+.      .. +.+ . ++++++|+
T Consensus         1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~advvil   67 (96)
T PF03807_consen    1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA------TADDNEEAAQEADVVIL   67 (96)
T ss_dssp             EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE------ESEEHHHHHHHTSEEEE
T ss_pred             CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc------ccCChHHhhccCCEEEE
Confidence            46677665   99999999999999   89985   99999999999977433      22 333 3 66777663

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=91.35  E-value=0.23  Score=46.74  Aligned_cols=66  Identities=17%  Similarity=0.212  Sum_probs=43.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE---cCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV---GDD  534 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv---g~~  534 (639)
                      .-+|-++|+-   |+|.+++++|.+.|..|.-   |+.+.-++++.+++...      +.++++  .+++++++   ||.
T Consensus        10 ~l~I~iIGaG---rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~------~~~~~~~~~~aDlv~iavpDda   80 (127)
T PF10727_consen   10 RLKIGIIGAG---RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGA------ILDLEEILRDADLVFIAVPDDA   80 (127)
T ss_dssp             --EEEEECTS---CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CCH
T ss_pred             ccEEEEECCC---HHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccc------ccccccccccCCEEEEEechHH
Confidence            4578999994   9999999999999999876   77778888887777655      444443  67788664   555


Q ss_pred             CCh
Q 006607          535 LTG  537 (639)
Q Consensus       535 ~~~  537 (639)
                      |.+
T Consensus        81 I~~   83 (127)
T PF10727_consen   81 IAE   83 (127)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=91.35  E-value=0.46  Score=47.48  Aligned_cols=30  Identities=17%  Similarity=0.320  Sum_probs=27.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~   32 (246)
T PRK12938          3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA   32 (246)
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence            36789999998  9999999999999999887

>PRK12747 short chain dehydrogenase; Provisional

Probab=91.34  E-value=0.27  Score=49.44  Aligned_cols=43  Identities=26%  Similarity=0.292  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+   +++++.+++..++
T Consensus         4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   49 (252)
T PRK12747          4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI   49 (252)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            36899999998  9999999999999999987   4556666665554

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=91.31  E-value=0.39  Score=51.46  Aligned_cols=31  Identities=13%  Similarity=0.174  Sum_probs=28.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..++|+|+|+||  =||+.+++.|.++|.+|+.
T Consensus        14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~   44 (348)
T PRK15181         14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG   44 (348)
T ss_pred             cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence            457899999999  9999999999999999876

>PRK07791 short chain dehydrogenase; Provisional

Probab=91.27  E-value=0.42  Score=49.76  Aligned_cols=44  Identities=18%  Similarity=0.169  Sum_probs=36.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---------~~~~~l~~~~~  508 (639)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  ++.         ++.+++.+++.
T Consensus         6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~   60 (286)
T PRK07791          6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV   60 (286)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence            46889999997  9999999999999999988  444         66777666643

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=91.24  E-value=0.41  Score=47.38  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=33.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~  506 (639)
                      +.++++|++|  -||+++|+.|+++|.+|.+  | ++++.+++.++
T Consensus         1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~   44 (242)
T TIGR01829         1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE   44 (242)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence            4689999998  9999999999999999887  4 55556555443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12744 short chain dehydrogenase; Provisional

Probab=91.24  E-value=0.25  Score=49.99  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~   37 (257)
T PRK12744          8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA   37 (257)
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence            36899999998  9999999999999999554

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=91.15  E-value=0.36  Score=46.77  Aligned_cols=92  Identities=15%  Similarity=0.150  Sum_probs=59.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc----cee-----------eecc----c
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-----------LSTS----Y  521 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-----------~~~~----~  521 (639)
                      .++|+|+|+-   .+|...++.|.+-|.+|+.  .+.++.++++.........    .+.           ....    +
T Consensus        20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f   96 (168)
T PF01262_consen   20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF   96 (168)
T ss_dssp             T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred             CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence            4688888865   9999999999999999999  5555666555442221111    000           0111    2


Q ss_pred             cc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc
Q 006607          522 AA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       522 ~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      .+  +.++++|         .-..++.++.++++||.+++|+| .+.-
T Consensus        97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis-~D~g  143 (168)
T PF01262_consen   97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS-CDQG  143 (168)
T ss_dssp             HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT-GGGT
T ss_pred             HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE-ecCC
Confidence            22  5667766         23578999999999999999999 5554

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=91.08  E-value=0.42  Score=49.95  Aligned_cols=43  Identities=23%  Similarity=0.347  Sum_probs=33.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++ ++.+.+.+++
T Consensus        46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~   91 (290)
T PRK06701         46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV   91 (290)
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence            46799999998  9999999999999999988  443 3444444443

>PRK08226 short chain dehydrogenase; Provisional

Probab=91.07  E-value=0.46  Score=48.06  Aligned_cols=34  Identities=15%  Similarity=0.367  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~   41 (263)
T PRK08226          6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE   41 (263)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence            46899999998  9999999999999999998  5543

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.05  E-value=0.47  Score=50.48  Aligned_cols=161  Identities=19%  Similarity=0.195  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC-
Q 006607          393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS-  448 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn-  448 (639)
                      .+-+.-+..-++.|++.|++.  .-|.       +++..+++|.|-   ++.++.= |++++.          +=|||= 
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~  123 (284)
T PRK14193         44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH  123 (284)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence            345555667778899999985  4444       333446788874   3333321 232331          224443 


Q ss_pred             ---------------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhc--cCcEEEe-cchhhHHHHHh
Q 006607          449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL  505 (639)
Q Consensus       449 ---------------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~~-~~~~~~~~l~~  505 (639)
                                     .-|+..|++=+     +-.-++|+++|.+.  -||+-+|..|.+  +|..|++ .++        
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~--------  193 (284)
T PRK14193        124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTG--------  193 (284)
T ss_pred             hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCC--------
Confidence                           23677776544     44678999999998  999999999997  7888988 221        


Q ss_pred             hCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce----eecCCcc
Q 006607          506 RIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF----YHSTPAM  572 (639)
Q Consensus       506 ~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~----y~~~~a~  572 (639)
                            +.      ++++  +.++|+|  +|  +.++++..   ++|+++||+. +++.   ++.-|+-    -.-...+
T Consensus       194 ------T~------~l~~~~k~ADIvV~AvGkp~~i~~~~i---k~GavVIDvG-in~~~~gkl~GDvd~~v~~~a~~iT  257 (284)
T PRK14193        194 ------TR------DLAAHTRRADIIVAAAGVAHLVTADMV---KPGAAVLDVG-VSRAGDGKLVGDVHPDVWEVAGAVS  257 (284)
T ss_pred             ------CC------CHHHHHHhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-ccccCCCcEEeecCHhHHhhCCEEe
Confidence                  01      1222  3566655  34  35777777   9999999998 6652   3334444    2222335


Q ss_pred             ccCCCCc
Q 006607          573 IIPPSLS  579 (639)
Q Consensus       573 ~~P~~~~  579 (639)
                      .||+.+-
T Consensus       258 PVPGGVG  264 (284)
T PRK14193        258 PNPGGVG  264 (284)
T ss_pred             CCCCChh
Confidence            5777654

>PRK07041 short chain dehydrogenase; Provisional

Probab=91.05  E-value=0.28  Score=48.49  Aligned_cols=40  Identities=18%  Similarity=0.253  Sum_probs=34.4

Q ss_pred             EEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          467 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       467 ~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +++|++|  -||+++|+.|+++|.+|.+  |+.++.+.+.+++.
T Consensus         1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   42 (230)
T PRK07041          1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG   42 (230)
T ss_pred             CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            4789998  9999999999999999988  88888877766653

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=91.00  E-value=1.6  Score=44.78  Aligned_cols=88  Identities=14%  Similarity=0.125  Sum_probs=58.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE--EcCcCCh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VGDDLTG  537 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg~~~~~  537 (639)
                      ....|++.|++|  .+|.++++.+...|.+|..  +++++.+.+++ ++...  .+.....+.....++++  +|....+
T Consensus       132 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~--~~~~~~~~~~~~~d~vl~~~g~~~~~  206 (305)
T cd08270         132 LGRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAAE--VVVGGSELSGAPVDLVVDSVGGPQLA  206 (305)
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcE--EEeccccccCCCceEEEECCCcHHHH
Confidence            367999999998  9999999999999999877  77888888866 44321  11111111113456666  4444445


Q ss_pred             hhhhcCCCCceeecccc
Q 006607          538 KEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       538 ~~q~~a~~G~~f~~~~~  554 (639)
                      +-.+.+++|-+++.+..
T Consensus       207 ~~~~~l~~~G~~v~~g~  223 (305)
T cd08270         207 RALELLAPGGTVVSVGS  223 (305)
T ss_pred             HHHHHhcCCCEEEEEec
Confidence            55567778888888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=90.90  E-value=0.65  Score=53.39  Aligned_cols=44  Identities=14%  Similarity=0.122  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|+ |  -+|+|+|..|.+.|.+|.+  |+.++.+++.++++
T Consensus       378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            4578999999 5  7999999999999999888  88899999987763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=90.87  E-value=0.32  Score=48.66  Aligned_cols=43  Identities=23%  Similarity=0.326  Sum_probs=35.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|++   +++++.+++.+++
T Consensus         6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l   51 (247)
T PRK12935          6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNEL   51 (247)
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHH
Confidence            46899999998  9999999999999999987   4566666665554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=90.84  E-value=0.37  Score=53.00  Aligned_cols=41  Identities=22%  Similarity=0.229  Sum_probs=33.9

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      +.+....+|+|+|+||  -||+++++.|.++|.+|..  |+.++.
T Consensus        55 ~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~~~   97 (390)
T PLN02657         55 SKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKSGI   97 (390)
T ss_pred             ccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechhhc
Confidence            3444567899999999  9999999999999999988  665443

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=90.78  E-value=0.31  Score=51.07  Aligned_cols=83  Identities=16%  Similarity=0.231  Sum_probs=56.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--EcCc--CC-
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD--LT-  536 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~--~~-  536 (639)
                      |.++|. |  .+|+++|+.|++.|.+|++  |++++.+.+++. +.      ...++.+ . ++++++|  +-+.  +. 
T Consensus         2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~~~~~~aDivi~~vp~~~~~~~   71 (291)
T TIGR01505         2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA------VTAETARQVTEQADVIFTMVPDSPQVEE   71 (291)
T ss_pred             EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------cccCCHHHHHhcCCEEEEecCCHHHHHH
Confidence            678886 4  9999999999999999998  888888887654 11      1122333 2 5666644  2221  11 


Q ss_pred             ----hhh-hhcCCCCceeecccccCCc
Q 006607          537 ----GKE-QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       537 ----~~~-q~~a~~G~~f~~~~~~~~~  558 (639)
                          +++ ...+++|+++++.|.++|.
T Consensus        72 v~~~~~~~~~~~~~g~iivd~st~~~~   98 (291)
T TIGR01505        72 VAFGENGIIEGAKPGKTLVDMSSISPI   98 (291)
T ss_pred             HHcCcchHhhcCCCCCEEEECCCCCHH
Confidence                111 2356899999999998885

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.71  E-value=0.4  Score=51.24  Aligned_cols=138  Identities=21%  Similarity=0.260  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607          394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  442 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  442 (639)
                      +-+.-+...++.|++.|++.--  |.       ++...++||.|-   ++.++.= |++++.                  
T Consensus        45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~  124 (294)
T PRK14187         45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN  124 (294)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence            4445566677889999988654  43       233346778885   4444421 333431                  


Q ss_pred             ----eeecCC---hh---HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          443 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       443 ----rvv~Gn---sl---taa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                          |+..|+   .+   |+++|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-        
T Consensus       125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T--------  194 (294)
T PRK14187        125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSAT--------  194 (294)
T ss_pred             hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCC--------
Confidence                333454   22   777776644     44688999999997  9999999999999999999 2111        


Q ss_pred             CCcccccceeeeccccc--cceeEEE--EcCc--CChhhhhcCCCCceeecccccCC
Q 006607          507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                            .      ++++  ++++|+|  +|+-  ++++..   ++|+++||+- +.+
T Consensus       195 ------~------~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gaiVIDVG-in~  235 (294)
T PRK14187        195 ------R------DLADYCSKADILVAAVGIPNFVKYSWI---KKGAIVIDVG-INS  235 (294)
T ss_pred             ------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                  1      1222  3566655  5544  777777   8999999996 544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=90.68  E-value=0.21  Score=51.53  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      .|+|+||||  .||+.+++.|.++|.+|..  |+.++.
T Consensus         1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~~   36 (285)
T TIGR03649         1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSSS   36 (285)
T ss_pred             CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCccc
Confidence            389999999  9999999999999998888  776543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06720 hypothetical protein; Provisional

Probab=90.68  E-value=0.4  Score=46.78  Aligned_cols=44  Identities=18%  Similarity=0.168  Sum_probs=36.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.++++|+++  -||+++|+.|+++|.+|.+  ++.++.++..+++
T Consensus        15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   60 (169)
T PRK06720         15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI   60 (169)
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            356889999997  8999999999999999988  6666666655554

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=90.63  E-value=0.5  Score=54.06  Aligned_cols=94  Identities=14%  Similarity=0.110  Sum_probs=60.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------cccc---cceee-ecccc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQ---HNLVL-STSYA  522 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~---~~l~~-~~~~~  522 (639)
                      .-++|.++|+ |  .+|+.||..|++.|.+|++  ++++.+++.++.+.             .+..   ...+. .++++
T Consensus         6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~   82 (507)
T PRK08268          6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALA   82 (507)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH
Confidence            4578999999 4  9999999999999999999  88888877432221             1111   11122 23465


Q ss_pred             c-cceeEEE--EcCcCChhh-----hhc-CCCCceee-cccccCCc
Q 006607          523 A-HKTKIWL--VGDDLTGKE-----QAR-APKGTIFI-PYTQIPPR  558 (639)
Q Consensus       523 ~-~~~~vwi--vg~~~~~~~-----q~~-a~~G~~f~-~~~~~~~~  558 (639)
                      + ++|+++|  |-+.++-++     ... .++|+++. ..|-+|+.
T Consensus        83 ~~~~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl~i~  128 (507)
T PRK08268         83 DLADCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSLSIT  128 (507)
T ss_pred             HhCCCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            5 7888777  333333222     222 48899884 77777765

>PRK06483 dihydromonapterin reductase; Provisional

Probab=90.61  E-value=0.4  Score=47.74  Aligned_cols=35  Identities=23%  Similarity=0.226  Sum_probs=30.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483          2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            35799999998  9999999999999999988  65543

>TIGR00658 orni_carb_tr ornithine carbamoyltransferase

Probab=90.58  E-value=2.5  Score=45.40  Aligned_cols=158  Identities=20%  Similarity=0.259  Sum_probs=95.6

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      |.++|++++.|+.=    +++|.       |....-+.+.|+|+         ..++.|+.+.+         +=..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  140 (304)
T TIGR00658        61 AYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVINGLTDLFHPCQALADLLTII  140 (304)
T ss_pred             HHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45699999999643    33444       35566678888887         35677777543         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhC---Ccccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRI---PVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~---~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +..+. +..+|..+|..+  .+.+..+.+|.+-|++|.+-.++.++   .+.+++   ..+.+.. +..+ +++ + +++
T Consensus       141 e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~a  217 (304)
T TIGR00658       141 EHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGS-VELTHDPVEAVKGA  217 (304)
T ss_pred             HHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            54432 456899999986  89999999999999999993333332   111111   1112222 2233 455 4 888


Q ss_pred             eEEEEcCcCChh------hhhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607          527 KIWLVGDDLTGK------EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  572 (639)
Q Consensus       527 ~vwivg~~~~~~------~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  572 (639)
                      +|+.+..|....      +....     +-+| +++.+   ..|+||. .|.+|+.
T Consensus       218 Dvvy~~~w~~~~~~~~~~~~~~~-----~~~y-~l~~~~l~~~~~~~ivmHplP~~  267 (304)
T TIGR00658       218 DVIYTDVWVSMGEEDKKEERLKL-----FRPY-QVNEELMELAKPEVIFMHCLPAH  267 (304)
T ss_pred             CEEEEcCcccCccccccHHHHHH-----hcCC-cCCHHHHhhcCCCCEEECCCCCC
Confidence            887775544211      11111     2233 37777   5678886 5888874

Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.53  E-value=0.48  Score=50.44  Aligned_cols=148  Identities=21%  Similarity=0.258  Sum_probs=95.0

Q ss_pred             hHHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCC
Q 006607          392 REAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS  448 (639)
Q Consensus       392 ~~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gn  448 (639)
                      ..+-+.-+...++.|++.|++..-  |.       +++.+++||.|-   ++.++.= |.+++.          +=|||=
T Consensus        42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl  121 (284)
T PRK14170         42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF  121 (284)
T ss_pred             CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence            344555577778889999988643  44       334447788875   3344311 222331          224443


Q ss_pred             h----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          449 S----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       449 s----------------ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                      |                -|++.|++=+.     -.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-        
T Consensus       122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T--------  191 (284)
T PRK14170        122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT--------  191 (284)
T ss_pred             ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence            3                36777766543     3688999999998  9999999999999999998 2211        


Q ss_pred             CCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607          507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  565 (639)
Q Consensus       507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  565 (639)
                            .      ++++  ++++|+|  +|  +.++++..   ++|+++||+. ++..   ++--|+-
T Consensus       192 ------~------~l~~~~~~ADIvI~AvG~~~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDvd  243 (284)
T PRK14170        192 ------K------DLPQVAKEADILVVATGLAKFVKKDYI---KPGAIVIDVG-MDRDENNKLCGDVD  243 (284)
T ss_pred             ------C------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-CcccCCCCeecccc
Confidence                  0      1222  3566666  33  34777766   8999999998 6652   3445554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.43  E-value=0.45  Score=49.25  Aligned_cols=46  Identities=20%  Similarity=0.195  Sum_probs=35.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc---hhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~---~~~~~~l~~~~~  508 (639)
                      .+.++++|+++++-||+++|+.|+++|.+|.+  |+   +++.++++++++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~   60 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG   60 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence            36789999972137999999999999999988  44   356666766653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.43  E-value=0.59  Score=47.51  Aligned_cols=32  Identities=13%  Similarity=0.282  Sum_probs=27.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~   37 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF   37 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            46899999994337999999999999999987

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.42  E-value=0.43  Score=49.22  Aligned_cols=43  Identities=16%  Similarity=0.292  Sum_probs=32.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~  506 (639)
                      +.++++|++++.-||+|+|+.|+++|.+|.+  |+.   +..++++.+
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~   54 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ   54 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc
Confidence            5789999984236999999999999999988  542   344444443

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=90.40  E-value=0.91  Score=46.37  Aligned_cols=147  Identities=19%  Similarity=0.146  Sum_probs=84.1

Q ss_pred             EEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEEc----CcC-C
Q 006607          467 LLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVG----DDL-T  536 (639)
Q Consensus       467 ~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg----~~~-~  536 (639)
                      ..+|.||  .||.++|+.|.+.|..|.+   |.++.++...+++...     +...+.+ + +.++|+++=    ++. .
T Consensus         4 ~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~-----i~~~~~~dA~~~aDVVvLAVP~~a~~~v   76 (211)
T COG2085           4 IAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL-----ITGGSNEDAAALADVVVLAVPFEAIPDV   76 (211)
T ss_pred             EEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc-----cccCChHHHHhcCCEEEEeccHHHHHhH
Confidence            4566677  9999999999999999999   6677777777775544     2233433 4 677776621    111 1


Q ss_pred             hhhhhcCCCCceeecccccCCc-CCCCCceee---cCCcc-----ccCCCCccccccccccCcchhhh--HHHHHHHHHh
Q 006607          537 GKEQARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHAL  605 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~-~~R~dc~y~---~~~a~-----~~P~~~~~~~~~e~~~pr~~~~A--c~a~~~v~al  605 (639)
                      .+|.+.+-.|.+++|.. +|-. ..++--+|.   ++.+.     .+|++             |++.|  --.++.+..+
T Consensus        77 ~~~l~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-------------kVVkAFn~i~a~~l~~~  142 (211)
T COG2085          77 LAELRDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-------------KVVKAFNTIPAAVLADL  142 (211)
T ss_pred             HHHHHHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-------------chhhhhcccCHHHhccC
Confidence            34454445688888887 5532 344333332   22221     24443             23333  0112222222


Q ss_pred             cCCCCCc-----cchhhhhHHHHHHHHHhcCCccC
Q 006607          606 EGWDLNE-----CGQTMCDIHQVWHASLRHGFRPL  635 (639)
Q Consensus       606 Egw~~~e-----~G~iv~~i~~iw~aa~kHGF~p~  635 (639)
                      ..-. ..     ||+-.+-..++-+++.+-||+|+
T Consensus       143 ~~~~-~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l  176 (211)
T COG2085         143 AKPG-GRRDVLVAGDDAEAKAVVAELAEDIGFRPL  176 (211)
T ss_pred             CCcC-CceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence            2221 11     33324567889999999999994

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.35  E-value=0.54  Score=50.08  Aligned_cols=146  Identities=21%  Similarity=0.234  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCccee----------eecCC--
Q 006607          394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKIK----------VVDGS--  448 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~ir----------vv~Gn--  448 (639)
                      +-+.-++.-++.|++.|++..-  |.       +++.++++|.|-   ++.++. -|++++.+          =|||=  
T Consensus        44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~  123 (286)
T PRK14184         44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP  123 (286)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence            3444566677889999988754  33       333446788874   333331 13334421          13332  


Q ss_pred             --------------hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe-cchhhHHHHH
Q 006607          449 --------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK  504 (639)
Q Consensus       449 --------------sltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~-~~~~~~~~l~  504 (639)
                                    .-|++.|++=     |+-.-++|+++|...  -||+-+|..|.+    +|-.|++ .++.  .   
T Consensus       124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--~---  196 (286)
T PRK14184        124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--P---  196 (286)
T ss_pred             hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--h---
Confidence                          2466666654     344678999999997  999999999998    8888888 2111  0   


Q ss_pred             hhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCce
Q 006607          505 LRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCF  565 (639)
Q Consensus       505 ~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~  565 (639)
                                     ++++  ++++++|  +|  +.++++..   ++|++++|+. +++.  ++--|+-
T Consensus       197 ---------------~l~~~~~~ADIVI~AvG~p~li~~~~v---k~GavVIDVG-i~~~~~~l~GDVd  246 (286)
T PRK14184        197 ---------------DLAEECREADFLFVAIGRPRFVTADMV---KPGAVVVDVG-INRTDDGLVGDCD  246 (286)
T ss_pred             ---------------hHHHHHHhCCEEEEecCCCCcCCHHHc---CCCCEEEEee-eeccCCCccCCcc
Confidence                           1221  3566666  33  34677666   9999999999 7663  4445554

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=90.35  E-value=0.57  Score=53.17  Aligned_cols=61  Identities=26%  Similarity=0.382  Sum_probs=45.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      |||.....+.--+..+...+.|+++|+ |  .+|++++..|.+.|.++.+  |+.++.+++.++.+
T Consensus       314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~  376 (477)
T PRK09310        314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ  376 (477)
T ss_pred             cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            566655555433334445678999996 6  8999999999999999888  78888888877643

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.30  E-value=0.42  Score=48.58  Aligned_cols=43  Identities=16%  Similarity=0.201  Sum_probs=31.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+.|+++|+++++-||+++|+.|+++|.+|.+  |+ ++.++..++
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~   51 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQK   51 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHh
Confidence            36789999982117999999999999999998  65 344433333

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.27  E-value=0.55  Score=47.46  Aligned_cols=32  Identities=25%  Similarity=0.340  Sum_probs=27.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|.+-||+++|+.|.++|.+|.+
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~   36 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF   36 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence            36799999994236999999999999999998

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.16  E-value=0.97  Score=48.19  Aligned_cols=149  Identities=22%  Similarity=0.265  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns  449 (639)
                      ++-+.-+....+.|++.|++..  -|.       +++..+++|.|-   ++.++. -|++++.          +=|||=|
T Consensus        43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~  122 (285)
T PRK14191         43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH  122 (285)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            3445556667778889998764  444       233347788774   333331 1232431          2244443


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++.  ++|++. 
T Consensus       123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~~-  197 (285)
T PRK14191        123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSFY-  197 (285)
T ss_pred             hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHHH-
Confidence                            4666666544     44678999999997  9999999999999999999 2111  111110 


Q ss_pred             CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607          508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  565 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  565 (639)
                                 +    +.++++|  +|  +.++++..   ++|++++|+. +++.   ++--|+-
T Consensus       198 -----------~----~~ADIvV~AvG~p~~i~~~~v---k~GavVIDvG-i~~~~~gklvGDvd  243 (285)
T PRK14191        198 -----------T----QNADIVCVGVGKPDLIKASMV---KKGAVVVDIG-INRLNDGRLVGDVD  243 (285)
T ss_pred             -----------H----HhCCEEEEecCCCCcCCHHHc---CCCcEEEEee-cccccCCceecccc
Confidence                       0    2455655  33  34666655   9999999998 6542   4445554

>PRK07577 short chain dehydrogenase; Provisional

Probab=90.15  E-value=0.32  Score=48.11  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=29.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.|+++|++|  .||+++|+.|+++|.+|.+  |+.+
T Consensus         4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~   38 (234)
T PRK07577          4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI   38 (234)
T ss_pred             CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            5799999998  9999999999999999988  5443

>PRK07856 short chain dehydrogenase; Provisional

Probab=90.13  E-value=0.34  Score=48.83  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=30.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            57899999998  9999999999999999998  65544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=90.11  E-value=0.39  Score=48.61  Aligned_cols=32  Identities=16%  Similarity=0.229  Sum_probs=28.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ...+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~   39 (253)
T PRK08993          8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG   39 (253)
T ss_pred             CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence            3456899999998  9999999999999999987

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.09  E-value=0.48  Score=49.22  Aligned_cols=46  Identities=15%  Similarity=0.247  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~~  508 (639)
                      .+.|+++|+++++-||+|+|+.|+++|.+|.+  |++   ++.+++.++++
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~   55 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG   55 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence            36889999972137999999999999999998  653   45666655543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=90.03  E-value=0.36  Score=51.20  Aligned_cols=64  Identities=13%  Similarity=0.154  Sum_probs=43.8

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc---cceeEEE--EcCcCChh
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL--VGDDLTGK  538 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi--vg~~~~~~  538 (639)
                      |+++|+||  -||++++..|++.|-+|++  |+..+-+..   +....+ +   ...+..   .++|+||  +|+.|-.+
T Consensus         1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~v~-~---~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPKASQN---LHPNVT-L---WEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcccc-c---cchhhhcccCCCCEEEECCCCccccc
Confidence            57999999  9999999999999999999  666555422   111110 1   222321   3577877  88888766

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.02  E-value=0.46  Score=50.54  Aligned_cols=160  Identities=18%  Similarity=0.237  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607          394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  442 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  442 (639)
                      +-+.-+...++.|++.|++..-  |.       +++.++++|.|-   ++.++.= |++++.                  
T Consensus        43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~  122 (282)
T PRK14182         43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP  122 (282)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence            4445566777889999998754  32       333346788875   4333321 233441                  


Q ss_pred             ----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          443 ----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       443 ----rvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                          |+..|+     .-|++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-         
T Consensus       123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T---------  191 (282)
T PRK14182        123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT---------  191 (282)
T ss_pred             hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence                222232     23666666544     44688999999997  9999999999999999999 2111         


Q ss_pred             Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccc
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMI  573 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~  573 (639)
                           .+      +++  +++||+|  +|+  -++++..   ++|++++|+. +...   ++.-|+-+.+     .....
T Consensus       192 -----~n------l~~~~~~ADIvI~AvGk~~~i~~~~i---k~gaiVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iTP  256 (282)
T PRK14182        192 -----AD------LAGEVGRADILVAAIGKAELVKGAWV---KEGAVVIDVG-MNRLADGKLVGDVEFAAAAARASAITP  256 (282)
T ss_pred             -----CC------HHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEee-ceecCCCCeeCCCCHHHHHhhccEecC
Confidence                 11      221  3566666  342  4666665   9999999998 6652   4446654322     22244


Q ss_pred             cCCCCc
Q 006607          574 IPPSLS  579 (639)
Q Consensus       574 ~P~~~~  579 (639)
                      ||+.+-
T Consensus       257 VPGGVG  262 (282)
T PRK14182        257 VPGGVG  262 (282)
T ss_pred             CCCCCh
Confidence            666544

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.98  E-value=0.51  Score=50.21  Aligned_cols=150  Identities=20%  Similarity=0.234  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607          393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  442 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  442 (639)
                      .+-+.-+..-++.|++.|++.--.  .       +++.++++|.|-   ++.+..= |++++.                 
T Consensus        43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~  122 (282)
T PRK14180         43 PASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFH  122 (282)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccC
Confidence            344455666677788888876543  3       233346788774   3333311 222331                 


Q ss_pred             -----eeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          443 -----KVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       443 -----rvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                           |+..|+     .-|+.+|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++-  ..|++.
T Consensus       123 ~~n~g~l~~g~~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T--~dl~~~  198 (282)
T PRK14180        123 PTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFT--TDLKSH  198 (282)
T ss_pred             hhhHHHHhcCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCC--CCHHHH
Confidence                 223342     34666666544     44688999999998  9999999999999999999 2111  111111


Q ss_pred             CCcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006607          507 IPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  566 (639)
Q Consensus       507 ~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y  566 (639)
                                  +    ++++|+|  +|  +.++++..   ++|++++|+. ++..  ++.-|+-+
T Consensus       199 ------------~----k~ADIvIsAvGkp~~i~~~~v---k~gavVIDvG-in~~~gkl~GDvd~  244 (282)
T PRK14180        199 ------------T----TKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHVDGKIVGDVDF  244 (282)
T ss_pred             ------------h----hhcCEEEEccCCcCcCCHHHc---CCCcEEEEec-ccccCCceeCCcCH
Confidence                        1    3566666  34  34677666   9999999998 6652  55566653

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=89.91  E-value=0.69  Score=48.57  Aligned_cols=39  Identities=21%  Similarity=0.185  Sum_probs=34.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ++|.++|+-   .+|+++|..|++.|.+|++  +++++.++.++
T Consensus         5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (292)
T PRK07530          5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA   45 (292)
T ss_pred             CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            579999996   9999999999999999999  88888877554

>PRK06940 short chain dehydrogenase; Provisional

Probab=89.91  E-value=0.62  Score=48.13  Aligned_cols=41  Identities=20%  Similarity=0.261  Sum_probs=33.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.++++|+ |  -||+++|+.|+ +|.+|.+  |+.++.+++.+++.
T Consensus         3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~   45 (275)
T PRK06940          3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR   45 (275)
T ss_pred             CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence            46788887 5  79999999997 7999998  88888877776653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=89.88  E-value=0.48  Score=51.64  Aligned_cols=85  Identities=16%  Similarity=0.221  Sum_probs=51.4

Q ss_pred             EEEecccCchhhHHHHHHHHhccC-c-EEEe--cchhhHHHHHhhCCccc-ccceeeecc---ccc--cceeEEE--EcC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRIPVEA-QHNLVLSTS---YAA--HKTKIWL--VGD  533 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~-~-~v~~--~~~~~~~~l~~~~~~~~-~~~l~~~~~---~~~--~~~~vwi--vg~  533 (639)
                      |++.|+ |  .+|+++|+.|.+++ . +|++  ||.++.+++.+++.... +..-+.+++   +++  +.++++|  +|.
T Consensus         1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            689999 9  99999999999776 4 7888  99999999988742222 111123443   333  7778877  554


Q ss_pred             cCChhhhh-cCCCCceeeccc
Q 006607          534 DLTGKEQA-RAPKGTIFIPYT  553 (639)
Q Consensus       534 ~~~~~~q~-~a~~G~~f~~~~  553 (639)
                      ...+.=.+ =+..|++++|.+
T Consensus        78 ~~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   78 FFGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             GGHHHHHHHHHHHT-EEEESS
T ss_pred             chhHHHHHHHHHhCCCeeccc
Confidence            42222111 124588888865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.80  E-value=0.46  Score=50.49  Aligned_cols=147  Identities=23%  Similarity=0.262  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcc----------eeeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~----------irvv~Gns  449 (639)
                      ++-+.-+..-.+.|++.|+++.-  |.       +++..+++|.|.   ++.++. -|++++          .+=|||=+
T Consensus        42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~  121 (282)
T PRK14169         42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS  121 (282)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence            34455566667788899987654  43       233346788864   333331 123232          12245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|+..|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++-         
T Consensus       122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T---------  190 (282)
T PRK14169        122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKT---------  190 (282)
T ss_pred             hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCC---------
Confidence                            3666666544     44678999999997  9999999999999999998 1111         


Q ss_pred             Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  565 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  565 (639)
                           .      ++++  ++++|+|  +|  +.++++..   ++|+++||+. +.+.   ++.-||-
T Consensus       191 -----~------~l~~~~~~ADIvI~AvG~p~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  242 (282)
T PRK14169        191 -----R------NLKQLTKEADILVVAVGVPHFIGADAV---KPGAVVIDVG-ISRGADGKLLGDVD  242 (282)
T ss_pred             -----C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCcEEEEee-ccccCCCCeeecCc
Confidence                 0      1221  3566666  33  35777766   9999999998 6652   4445655

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.71  E-value=0.54  Score=49.98  Aligned_cols=161  Identities=17%  Similarity=0.239  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeec-CCCCcce-----------------
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI-----------------  442 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i-----------------  442 (639)
                      .+-+.-+..-.+.|++.|++..-  |.       +++.+++||.|-   ++.++. -|++++.                 
T Consensus        42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~  121 (282)
T PRK14166         42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH  121 (282)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            34455566667788999988543  43       233346788874   333331 1222331                 


Q ss_pred             -----eeecC-C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          443 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       443 -----rvv~G-n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                           |+..| +    .-|+++|++=+     +-.-++|+++|...  -||+-+|..|.++|..|++ .++-        
T Consensus       122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T--------  191 (282)
T PRK14166        122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKT--------  191 (282)
T ss_pred             hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence                 22334 1    34666666544     34678999999997  9999999999999999998 2111        


Q ss_pred             CCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCcc
Q 006607          507 IPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAM  572 (639)
Q Consensus       507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~  572 (639)
                            .      ++++  ++++|+|  +|  +.++++..   ++|++++|+. +.+.   ++--||-+.+     ....
T Consensus       192 ------~------nl~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd~~~v~~~a~~iT  255 (282)
T PRK14166        192 ------K------DLSLYTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRLESGKIVGDVDFEEVSKKSSYIT  255 (282)
T ss_pred             ------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEec-ccccCCCCeeCCCCHHHHHhhccEec
Confidence                  1      1221  3566766  33  34777766   9999999998 6652   4446665332     1124


Q ss_pred             ccCCCCc
Q 006607          573 IIPPSLS  579 (639)
Q Consensus       573 ~~P~~~~  579 (639)
                      .||+.+-
T Consensus       256 PVPGGVG  262 (282)
T PRK14166        256 PVPGGVG  262 (282)
T ss_pred             CCCCCch
Confidence            4666544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.66  E-value=0.58  Score=47.76  Aligned_cols=46  Identities=17%  Similarity=0.234  Sum_probs=34.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~  507 (639)
                      ..+.|+++|+++++-||+++|+.|+++|.+|.+  |+++   +.+++++++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~   59 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL   59 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence            457899999983126999999999999999988  5543   345555554

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.64  E-value=0.76  Score=49.01  Aligned_cols=139  Identities=20%  Similarity=0.232  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006607          395 INSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS--  449 (639)
Q Consensus       395 in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns--  449 (639)
                      -+.-+..-.+.|++.|++.-  -|.       +++..++||.|-   ++.++.= |++++.          +=|||=+  
T Consensus        52 S~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~  131 (287)
T PRK14176         52 SKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPY  131 (287)
T ss_pred             hHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChh
Confidence            34445566677888888653  443       344456777764   3333311 222331          1234433  


Q ss_pred             --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006607          450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV  509 (639)
Q Consensus       450 --------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~  509 (639)
                                    -|++.|++-+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++  ..+|++.   
T Consensus       132 N~g~l~~g~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~hs~--T~~l~~~---  204 (287)
T PRK14176        132 NMGKLMIGDEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCHVF--TDDLKKY---  204 (287)
T ss_pred             hhhhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEecc--CCCHHHH---
Confidence                          3666666544     34678999999996  8999999999999999999 211  0111111   


Q ss_pred             ccccceeeeccccccceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006607          510 EAQHNLVLSTSYAAHKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       510 ~~~~~l~~~~~~~~~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                               +    ++++++|+  |+  .++++   +.++|++++|+. +..
T Consensus       205 ---------~----~~ADIvv~AvG~p~~i~~~---~vk~gavVIDvG-in~  239 (287)
T PRK14176        205 ---------T----LDADILVVATGVKHLIKAD---MVKEGAVIFDVG-ITK  239 (287)
T ss_pred             ---------H----hhCCEEEEccCCccccCHH---HcCCCcEEEEec-ccc
Confidence                     0    35566553  43  45555   459999999998 554

>PRK08655 prephenate dehydrogenase; Provisional

Probab=89.61  E-value=0.82  Score=51.33  Aligned_cols=83  Identities=16%  Similarity=0.212  Sum_probs=54.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEEcCcCCh---
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLTG---  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg~~~~~---  537 (639)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.+++..+.+...      .++.+ . .+++++|+--..+.   
T Consensus         2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~------~~~~~e~~~~aDvVIlavp~~~~~~   73 (437)
T PRK08655          2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY------ANDNIDAAKDADIVIISVPINVTED   73 (437)
T ss_pred             EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee------ccCHHHHhccCCEEEEecCHHHHHH
Confidence            588999998  9999999999999999888  77777666655543221      22333 2 56666553211111   


Q ss_pred             --hh-hhcCCCCceeeccccc
Q 006607          538 --KE-QARAPKGTIFIPYTQI  555 (639)
Q Consensus       538 --~~-q~~a~~G~~f~~~~~~  555 (639)
                        ++ ...+++|+++++++-+
T Consensus        74 vl~~l~~~l~~~~iViDvsSv   94 (437)
T PRK08655         74 VIKEVAPHVKEGSLLMDVTSV   94 (437)
T ss_pred             HHHHHHhhCCCCCEEEEcccc
Confidence              12 2235789999999853

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=89.59  E-value=0.48  Score=50.48  Aligned_cols=139  Identities=24%  Similarity=0.283  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  449 (639)
                      .+-+.-+..-++.|++.|+++.-  |-       +++..++||.|.   ++.++.= |++++          .+=|||=+
T Consensus        41 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~  120 (287)
T PRK14173         41 PASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFH  120 (287)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence            34455566777889999988754  33       233346788874   4344421 33233          12245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|+.+|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-         
T Consensus       121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T---------  189 (287)
T PRK14173        121 PLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKT---------  189 (287)
T ss_pred             hhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCC---------
Confidence                            3666666644     33678999999998  9999999999999999998 2111         


Q ss_pred             Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                           .+      +++  ++++|+|  +|+  -++++..   ++|+++||+. +++
T Consensus       190 -----~~------l~~~~~~ADIvIsAvGkp~~i~~~~v---k~GavVIDVG-in~  230 (287)
T PRK14173        190 -----QD------LPAVTRRADVLVVAVGRPHLITPEMV---RPGAVVVDVG-INR  230 (287)
T ss_pred             -----CC------HHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEEcc-Ccc
Confidence                 01      221  3556655  443  4666666   9999999998 554

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=89.59  E-value=0.6  Score=49.08  Aligned_cols=92  Identities=12%  Similarity=0.055  Sum_probs=56.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------ccc---ccceeeec-cccc-
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEA---QHNLVLST-SYAA-  523 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~---~~~l~~~~-~~~~-  523 (639)
                      ++|.++|+-   .+|+++|..|++.|.+|.+  +++++.++.++++.             .+.   .......+ ++++ 
T Consensus         5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   81 (295)
T PLN02545          5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL   81 (295)
T ss_pred             CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence            569999986   9999999999999999999  77777764333211             100   00111222 3444 


Q ss_pred             cceeEEEE--cCcCChhh------hhcCCCCceee-cccccCCc
Q 006607          524 HKTKIWLV--GDDLTGKE------QARAPKGTIFI-PYTQIPPR  558 (639)
Q Consensus       524 ~~~~vwiv--g~~~~~~~------q~~a~~G~~f~-~~~~~~~~  558 (639)
                      ++++++|.  -+..+-++      ...++++++++ ..|-+++.
T Consensus        82 ~~aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i~~~  125 (295)
T PLN02545         82 RDADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSISIT  125 (295)
T ss_pred             CCCCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence            77877663  11111111      12478898886 66667665

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=89.46  E-value=1.2  Score=49.21  Aligned_cols=125  Identities=14%  Similarity=0.142  Sum_probs=78.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--c---------cccceeeecccc-c-cceeEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------AQHNLVLSTSYA-A-HKTKIW  529 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~---------~~~~l~~~~~~~-~-~~~~vw  529 (639)
                      +|.++|..   -+|..+|..|++ |.+|+.  +++++.+++++....  |         ....+...++.. + ++++++
T Consensus         2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v   77 (388)
T PRK15057          2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV   77 (388)
T ss_pred             EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence            47888877   999999987775 999999  899999999885322  1         111111122233 2 667665


Q ss_pred             E--EcCcCChh--------------hhhcCCCCceeecccccCCc---CCCCCc---eeecCCccccCCCCccccccccc
Q 006607          530 L--VGDDLTGK--------------EQARAPKGTIFIPYTQIPPR---KLRKDC---FYHSTPAMIIPPSLSNMHSCENW  587 (639)
Q Consensus       530 i--vg~~~~~~--------------~q~~a~~G~~f~~~~~~~~~---~~R~dc---~y~~~~a~~~P~~~~~~~~~e~~  587 (639)
                      |  |++.++.+              +..++++|.+++.-|-+||.   ++++..   -...+|....|++.-    -++-
T Consensus        78 ii~Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~~PE~l~~G~a~----~d~~  153 (388)
T PRK15057         78 IIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKAL----YDNL  153 (388)
T ss_pred             EEeCCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHHHHhhcCcEEECcccccCCccc----cccc
Confidence            4  66554432              22345899999999999998   332222   133366666666532    2355


Q ss_pred             cCcchhhhHH
Q 006607          588 LGRRVMSAWR  597 (639)
Q Consensus       588 ~pr~~~~Ac~  597 (639)
                      -|+|+|..|-
T Consensus       154 ~p~rvv~G~~  163 (388)
T PRK15057        154 HPSRIVIGER  163 (388)
T ss_pred             CCCEEEEEcC
Confidence            6888877643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=89.40  E-value=0.6  Score=46.00  Aligned_cols=40  Identities=23%  Similarity=0.327  Sum_probs=31.3

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI  507 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~  507 (639)
                      |+++|++|  -||+.+|+.|+++|.+|.+  |+. ++.+.+++++
T Consensus         1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~   43 (239)
T TIGR01830         1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL   43 (239)
T ss_pred             CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence            57899998  9999999999999999888  443 4555554443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=89.38  E-value=0.39  Score=52.04  Aligned_cols=67  Identities=18%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-cccc--cceeEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi  530 (639)
                      -.....+.||||  =.|.-||++||++|.+-.|  ||.++++.|.+++..+.+..=+.+- .+++  ...||++
T Consensus         5 ~e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl   76 (382)
T COG3268           5 REYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL   76 (382)
T ss_pred             cceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence            345788999999  9999999999999999988  9999999999999998876533222 2444  5557877

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=89.27  E-value=0.63  Score=49.67  Aligned_cols=36  Identities=17%  Similarity=0.138  Sum_probs=30.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ++|+++|++|  =||+++|+.|.++|.+|+.  |+++...
T Consensus         5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~   42 (349)
T TIGR02622         5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSP   42 (349)
T ss_pred             CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccch
Confidence            6799999999  9999999999999999987  5554433

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=89.25  E-value=1.1  Score=49.31  Aligned_cols=170  Identities=16%  Similarity=0.119  Sum_probs=111.2

Q ss_pred             eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeec
Q 006607          442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST  519 (639)
Q Consensus       442 irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~  519 (639)
                      -|-=||.|+.-++ .+.+-  -.-+.|+|+|=-   .+||-||..|.-.|-+|.+..-|....|+.. ..++     ++.
T Consensus       187 NrYGtgqS~~DgI-~RaTn~liaGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~-MdGf-----~V~  256 (420)
T COG0499         187 NRYGTGQSLLDGI-LRATNVLLAGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAA-MDGF-----RVM  256 (420)
T ss_pred             cccccchhHHHHH-HhhhceeecCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHh-hcCc-----EEE
Confidence            3444555554332 22222  245677777765   9999999999999999999666666666554 2332     355


Q ss_pred             ccc-c-cceeEEE----EcCcCChhhhhcCCCCceeecccccCCc--------------CCCCCceeecCCc---cc--c
Q 006607          520 SYA-A-HKTKIWL----VGDDLTGKEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---MI--I  574 (639)
Q Consensus       520 ~~~-~-~~~~vwi----vg~~~~~~~q~~a~~G~~f~~~~~~~~~--------------~~R~dc~y~~~~a---~~--~  574 (639)
                      +.+ + ...+|.|    .-+.|+.|+.++|+.|++.|-.-.|+-+              +.|+.+.-.+.|.   +.  -
T Consensus       257 ~m~~Aa~~gDifiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~lla  336 (420)
T COG0499         257 TMEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLA  336 (420)
T ss_pred             EhHHhhhcCCEEEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEe
Confidence            554 3 5557877    4578999999999999999877653322              3333333222221   11  1


Q ss_pred             CCCCccccccccccCcchhhhHHHHHHHHHhcCCCCC---ccch--hhhhHHH
Q 006607          575 PPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLN---ECGQ--TMCDIHQ  622 (639)
Q Consensus       575 P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~---e~G~--iv~~i~~  622 (639)
                      -+-+-|+. |--+.|..+|+..+|--.+.+.|=|..+   |-|=  +...+|+
T Consensus       337 eGRLvNLa-~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~  388 (420)
T COG0499         337 EGRLVNLA-AATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGVYRLPKELDE  388 (420)
T ss_pred             cceeeeec-cCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence            22367787 8899999999999999999888888766   4453  2355554

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=89.20  E-value=1.2  Score=49.76  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=67.6

Q ss_pred             eeeecCChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee
Q 006607          442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  517 (639)
Q Consensus       442 irvv~Gnsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~  517 (639)
                      -|.=+|.|.. -.+++.+.  ...++|+|+|+-   .||+.+|+.+...|.+|++  +++.|.+.-++ .+..       
T Consensus       180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~-------  247 (413)
T cd00401         180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYE-------  247 (413)
T ss_pred             ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCE-------
Confidence            4555777753 44444443  356789999998   9999999999999999998  66677664433 2221       


Q ss_pred             eccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccc
Q 006607          518 STSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       518 ~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                      ..+.++  +.++++|  .|  ..++.+....+++|.+++-+..
T Consensus       248 ~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         248 VMTMEEAVKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             EccHHHHHcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence            112222  4567766  33  3455566888999999987775

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK06523 short chain dehydrogenase; Provisional

Probab=89.20  E-value=0.43  Score=48.17  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=30.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         8 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~   44 (260)
T PRK06523          8 AGKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP   44 (260)
T ss_pred             CCCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence            347899999998  9999999999999999988  5543

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=89.17  E-value=1  Score=48.15  Aligned_cols=92  Identities=13%  Similarity=0.097  Sum_probs=59.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc-----cc--ccceeeeccccc--cceeEEE--
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-----EA--QHNLVLSTSYAA--HKTKIWL--  530 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~-----~~--~~~l~~~~~~~~--~~~~vwi--  530 (639)
                      .+|.+.|+-   .+|.++|..|++.|.+|++  |++++.+.+++.-..     +.  ..+....++.++  ++++++|  
T Consensus         5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence            468999986   9999999999999999999  888888888764211     10  011112224543  5666655  


Q ss_pred             EcCcCChhhhhcCCCCceeecccc-cCCc
Q 006607          531 VGDDLTGKEQARAPKGTIFIPYTQ-IPPR  558 (639)
Q Consensus       531 vg~~~~~~~q~~a~~G~~f~~~~~-~~~~  558 (639)
                      +-..-..+-...+++|+.++.++. +.+.
T Consensus        82 v~~~~~~~v~~~l~~~~~vi~~~~Gi~~~  110 (328)
T PRK14618         82 VPSKALRETLAGLPRALGYVSCAKGLAPD  110 (328)
T ss_pred             CchHHHHHHHHhcCcCCEEEEEeeccccC
Confidence            222222333355688999999887 6654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=89.09  E-value=0.55  Score=52.29  Aligned_cols=38  Identities=24%  Similarity=0.263  Sum_probs=32.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      .+.|+++||+|  -||+++|+.|+++|.+|..  |++++.++
T Consensus       178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~~  217 (406)
T PRK07424        178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKITL  217 (406)
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            46899999998  9999999999999999987  66666543

>PLN02778 3,5-epimerase/4-reductase

Probab=88.99  E-value=0.57  Score=49.39  Aligned_cols=36  Identities=17%  Similarity=0.189  Sum_probs=31.2

Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++.|+ .+.+|+++|++|  =||+.+++.|.++|.+|+.
T Consensus         2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            45666 356899999999  9999999999999999975

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=88.99  E-value=1  Score=44.61  Aligned_cols=29  Identities=24%  Similarity=0.366  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~   31 (245)
T PRK12824          3 KIALVTGAKR--GIGSAIARELLNDGYRVIA   31 (245)
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence            5789999998  9999999999999999988

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=88.92  E-value=1.2  Score=43.67  Aligned_cols=79  Identities=13%  Similarity=0.186  Sum_probs=46.8

Q ss_pred             HHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc
Q 006607          451 AAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  523 (639)
Q Consensus       451 taa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  523 (639)
                      |+..+++=     ++..-++|+++|..+  -||+-++..|.++|-.|++  .+.+.+++   .+                
T Consensus        19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~~---~~----------------   77 (160)
T PF02882_consen   19 TPLAIIELLEYYGIDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQE---IT----------------   77 (160)
T ss_dssp             HHHHHHHHHHHTT-STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHHH---HH----------------
T ss_pred             CHHHHHHHHHhcCCCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCcccc---ee----------------
Confidence            55555543     345678999999997  9999999999999999999  21112221   10                


Q ss_pred             cceeEEEEcCc----CChhhhhcCCCCceeeccc
Q 006607          524 HKTKIWLVGDD----LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       524 ~~~~vwivg~~----~~~~~q~~a~~G~~f~~~~  553 (639)
                      +.+|++|+.-+    ++++   +.++|+++||+.
T Consensus        78 ~~ADIVVsa~G~~~~i~~~---~ik~gavVIDvG  108 (160)
T PF02882_consen   78 RRADIVVSAVGKPNLIKAD---WIKPGAVVIDVG  108 (160)
T ss_dssp             TTSSEEEE-SSSTT-B-GG---GS-TTEEEEE--
T ss_pred             eeccEEeeeeccccccccc---cccCCcEEEecC
Confidence            35566663322    3333   458899999887

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK01713 ornithine carbamoyltransferase; Provisional

Probab=88.91  E-value=2.1  Score=46.62  Aligned_cols=164  Identities=15%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.=    +++|.       |.+..-+.+.|+|+         ...++|+.|.+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaL~Dl~Ti~  147 (334)
T PRK01713         68 AYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVFNGLTDEFHPTQMLADVLTMI  147 (334)
T ss_pred             HHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            36899999999743    44454       34556677788886         36789998865         1246666


Q ss_pred             hcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH------HHHhhCCcccccceeeecccc-c-cce
Q 006607          457 NSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE------KLKLRIPVEAQHNLVLSTSYA-A-HKT  526 (639)
Q Consensus       457 ~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~------~l~~~~~~~~~~~l~~~~~~~-~-~~~  526 (639)
                      +...  -+..+|.++|... +.+++..+..+++-|.+|.+-.++.|+      +..++...+.+..+...++++ + +++
T Consensus       148 e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~a  226 (334)
T PRK01713        148 ENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEKFAKESGARITVTDDIDKAVKGV  226 (334)
T ss_pred             HHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCC
Confidence            6543  2456999999973 369999999999999999993333332      111222222333312233565 4 788


Q ss_pred             eEEEEcCcCChhhhhc--CCCCceeecccccCCc--C-C-CCCcee-ecCCc
Q 006607          527 KIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--K-L-RKDCFY-HSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~-~-R~dc~y-~~~~a  571 (639)
                      +|+..+-|.+-.++..  ...-..|-+|. +..+  + . |+||.+ |.+|+
T Consensus       227 DvVyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~k~~aivmH~lP~  277 (334)
T PRK01713        227 DFVHTDVWVSMGEPLETWGERIKLLMPYQ-VTPELMKRTGNPKVKFMHCLPA  277 (334)
T ss_pred             CEEEEcceeecccchhhHHHHHHhccCCc-CCHHHHhccCCCCCEEECCCCC
Confidence            8877655443211100  00001344554 8877  3 3 578875 77776

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.75  E-value=0.64  Score=49.58  Aligned_cols=146  Identities=21%  Similarity=0.254  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcc-------------------
Q 006607          394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLK-------------------  441 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~-------------------  441 (639)
                      +-+.-++.-++.|++.|++..-.=         +++..++||.|-   ++.++.= |++++                   
T Consensus        45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~  124 (288)
T PRK14171         45 ASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHP  124 (288)
T ss_pred             cHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCc
Confidence            444446666778888888765432         334446778774   3333311 22222                   


Q ss_pred             ---eeeecCC-----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          442 ---IKVVDGS-----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       442 ---irvv~Gn-----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                         =|+..|+     .-|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++-         
T Consensus       125 ~N~g~l~~g~~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T---------  193 (288)
T PRK14171        125 LNVGYLHSGISQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKT---------  193 (288)
T ss_pred             cchhhhhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC---------
Confidence               1233443     34666666544     34678999999998  9999999999999999998 2111         


Q ss_pred             Ccccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCCc---CCCCCce
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF  565 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~  565 (639)
                           .+      +++  ++++|+|  +|+  .++++..   ++|+++||+. +...   ++.-|+-
T Consensus       194 -----~~------L~~~~~~ADIvV~AvGkp~~i~~~~v---k~GavVIDvG-in~~~~gkl~GDVd  245 (288)
T PRK14171        194 -----HN------LSSITSKADIVVAAIGSPLKLTAEYF---NPESIVIDVG-INRISGNKIIGDVD  245 (288)
T ss_pred             -----CC------HHHHHhhCCEEEEccCCCCccCHHHc---CCCCEEEEee-ccccCCCCeECCcc
Confidence                 11      222  3566766  443  3666666   9999999998 6663   4446655

>PRK06398 aldose dehydrogenase; Validated

Probab=88.74  E-value=0.46  Score=48.41  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|++  |+++
T Consensus         6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~   41 (258)
T PRK06398          6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP   41 (258)
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence            36899999998  9999999999999999998  5443

>PRK08324 short chain dehydrogenase; Validated

Probab=88.72  E-value=0.8  Score=54.02  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=39.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |+.++.+++.+++..
T Consensus       422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~  468 (681)
T PRK08324        422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG  468 (681)
T ss_pred             CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence            47899999998  9999999999999999988  888888888776544

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=88.60  E-value=0.95  Score=47.39  Aligned_cols=85  Identities=11%  Similarity=0.119  Sum_probs=53.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-cccc-cceeEEEEcCcCCh---
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYAA-HKTKIWLVGDDLTG---  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~-~~~~vwivg~~~~~---  537 (639)
                      +|.++| .|  .+|.++|+.|.++|.+|..  ++++..++++++-...      ..+ +.++ ++++++|+--..+.   
T Consensus         2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~------~~~~~~~~~~~aDlVilavp~~~~~~   72 (279)
T PRK07417          2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVD------EASTDLSLLKDCDLVILALPIGLLLP   72 (279)
T ss_pred             eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcc------cccCCHhHhcCCCEEEEcCCHHHHHH
Confidence            588999 46  9999999999999999988  7777887776541100      121 2333 56777553111100   


Q ss_pred             --hhh-hcCCCCceeecccccCCc
Q 006607          538 --KEQ-ARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       538 --~~q-~~a~~G~~f~~~~~~~~~  558 (639)
                        ++. ..+++|+++++++-+++.
T Consensus        73 ~~~~l~~~l~~~~ii~d~~Svk~~   96 (279)
T PRK07417         73 PSEQLIPALPPEAIVTDVGSVKAP   96 (279)
T ss_pred             HHHHHHHhCCCCcEEEeCcchHHH
Confidence              122 234678888887766554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=88.53  E-value=0.81  Score=48.50  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=27.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+|+|++|  -||+++++.|.++|.+|..
T Consensus         6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~   35 (340)
T PLN02653          6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG   35 (340)
T ss_pred             CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence            35799999999  9999999999999999987

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.52  E-value=0.58  Score=46.71  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=27.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|  .||+++|+.|+++|.++.+
T Consensus         6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~   35 (252)
T PRK06077          6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV   35 (252)
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence            36899999998  9999999999999999876

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.47  E-value=1.2  Score=47.62  Aligned_cols=139  Identities=19%  Similarity=0.207  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeec-CCCCcc----------eeeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~----------irvv~Gns  449 (639)
                      .+-+.-++.-++.|++.|++.  +-|-       +++..+++|.|-   ++.++. -|++++          .+=|||=+
T Consensus        45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~  124 (285)
T PRK10792         45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH  124 (285)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence            345555667778889999884  4443       233336788774   333331 122232          12234432


Q ss_pred             ----------------hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|++.|++-+.     -..++|+++|...  -+|+-+|..|.++|-.|++ .++  ..      
T Consensus       125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~--T~------  194 (285)
T PRK10792        125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRF--TK------  194 (285)
T ss_pred             hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECC--CC------
Confidence                            36777766553     3578999999996  8999999999999999999 211  01      


Q ss_pred             Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                  ++++  +.++++|  +|  +.++++..   ++|++++|+. +.+
T Consensus       195 ------------~l~~~~~~ADIvi~avG~p~~v~~~~v---k~gavVIDvG-in~  234 (285)
T PRK10792        195 ------------NLRHHVRNADLLVVAVGKPGFIPGEWI---KPGAIVIDVG-INR  234 (285)
T ss_pred             ------------CHHHHHhhCCEEEEcCCCcccccHHHc---CCCcEEEEcc-ccc
Confidence                        1221  3556655  32  34666554   9999999998 555

>PLN00015 protochlorophyllide reductase

Probab=88.36  E-value=0.79  Score=48.26  Aligned_cols=40  Identities=18%  Similarity=0.140  Sum_probs=35.1

Q ss_pred             EEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCC
Q 006607          467 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       467 ~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +++|+++  -||+++|+.|+++| .+|.+  |+.++.+++.+++.
T Consensus         1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~   43 (308)
T PLN00015          1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG   43 (308)
T ss_pred             CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4789997  99999999999999 89888  88888888877764

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=88.23  E-value=0.8  Score=49.06  Aligned_cols=139  Identities=18%  Similarity=0.206  Sum_probs=88.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns  449 (639)
                      .+-+.-+...++.|++.|++..  -|-       +++..+++|.|-   ++.++.= |++++          .+=|||=|
T Consensus        44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~  123 (297)
T PRK14186         44 PASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLH  123 (297)
T ss_pred             hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence            3455556677788999998875  443       223336677765   4333311 23233          12244433


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|+.+|++=+     +-.-++|+++|.+.  -||+-+|..|.++|..|++ .++.+        
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~--------  193 (297)
T PRK14186        124 PLNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQ--------  193 (297)
T ss_pred             hhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCC--------
Confidence                            3566666544     34578999999997  9999999999999999998 21110        


Q ss_pred             Ccccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          508 PVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                  ++++  ++++|+|  +|  +.++++..   ++|+++||+. +.+
T Consensus       194 ------------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~  233 (297)
T PRK14186        194 ------------DLASITREADILVAAAGRPNLIGAEMV---KPGAVVVDVG-IHR  233 (297)
T ss_pred             ------------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                        1221  3566666  34  34666666   9999999998 554

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=88.18  E-value=0.75  Score=48.19  Aligned_cols=85  Identities=14%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcC----
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  533 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  533 (639)
                      .+|.++|. |  .+|+++|+.|.+.|.+|..  |++++.+++++. ..      ...+++++  ++++++|  +-+    
T Consensus         3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~------~~~~~~~e~~~~~d~vi~~vp~~~~~   72 (296)
T PRK11559          3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GA------ETASTAKAVAEQCDVIITMLPNSPHV   72 (296)
T ss_pred             ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEeCCCHHHH
Confidence            36889996 5  9999999999999999988  788888777653 10      11223432  5566644  211    


Q ss_pred             --cCChhh--hhcCCCCceeecccccCCc
Q 006607          534 --DLTGKE--QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       534 --~~~~~~--q~~a~~G~~f~~~~~~~~~  558 (639)
                        .+..++  ...+++|+++++.|.++|.
T Consensus        73 ~~v~~~~~~~~~~~~~g~iiid~st~~~~  101 (296)
T PRK11559         73 KEVALGENGIIEGAKPGTVVIDMSSIAPL  101 (296)
T ss_pred             HHHHcCcchHhhcCCCCcEEEECCCCCHH
Confidence              111111  2345899999999998885

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=88.18  E-value=0.37  Score=50.02  Aligned_cols=34  Identities=29%  Similarity=0.295  Sum_probs=29.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      +|+++|++|  -||+.+|+.|.++|.+|..  |+.++.
T Consensus         2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (328)
T TIGR03466         2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSDR   37 (328)
T ss_pred             eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCccc
Confidence            689999999  9999999999999999988  655543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.98  E-value=0.76  Score=48.82  Aligned_cols=146  Identities=23%  Similarity=0.283  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh--
Q 006607          395 INSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS--  449 (639)
Q Consensus       395 in~~I~~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns--  449 (639)
                      -+.-+..-.+.|++.|++..-  |.       +++.+++||.|.   ++.++.= |++++.          +=|||=+  
T Consensus        46 s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~  125 (278)
T PRK14172         46 SIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFI  125 (278)
T ss_pred             HHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHh
Confidence            334455556778888887753  32       344447788774   4344321 232331          2244432  


Q ss_pred             --------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006607          450 --------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV  509 (639)
Q Consensus       450 --------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~  509 (639)
                                    -|++.|++=+     +-.-++|+++|.+.  -||+-+|..|-++|..|++ .++            
T Consensus       126 n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~------------  191 (278)
T PRK14172        126 SVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSK------------  191 (278)
T ss_pred             hHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCC------------
Confidence                          3566665533     44678999999997  9999999999999999999 211            


Q ss_pred             ccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006607          510 EAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  566 (639)
Q Consensus       510 ~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y  566 (639)
                        +.+      +++  ++++|+|  +|  +.++++..   ++|++++|+- +++.  ++--|+-+
T Consensus       192 --T~~------l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gavVIDvG-in~~~gkl~GDvd~  244 (278)
T PRK14172        192 --TKN------LKEVCKKADILVVAIGRPKFIDEEYV---KEGAIVIDVG-TSSVNGKITGDVNF  244 (278)
T ss_pred             --CCC------HHHHHhhCCEEEEcCCCcCccCHHHc---CCCcEEEEee-ccccCCceeeeccH
Confidence              011      222  3566666  33  35777766   9999999996 5553  45556653

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=87.88  E-value=0.75  Score=49.33  Aligned_cols=121  Identities=17%  Similarity=0.222  Sum_probs=82.0

Q ss_pred             cceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee
Q 006607          440 LKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL  517 (639)
Q Consensus       440 L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~  517 (639)
                      .+-|++.+.+.   ....+++...++|=.+|=-   -.|++.|.-|-+.|.+|++  |++++.+++++.=.+-.      
T Consensus        15 ~~~~~~~~~~~---~~s~~~~~s~~~iGFIGLG---~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~------   82 (327)
T KOG0409|consen   15 FSRRLVKASET---AMSSRITPSKTRIGFIGLG---NMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVA------   82 (327)
T ss_pred             hcccccccccc---cccccCCcccceeeEEeec---cchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhh------
Confidence            44566666665   5566666667788888754   7899999999999999999  99999999987722111      


Q ss_pred             ecccc-ccceeEE--EEcCcCChhhhhc--------CCCCcee-ecccccCCc-------CC-CCCceeecCCcc
Q 006607          518 STSYA-AHKTKIW--LVGDDLTGKEQAR--------APKGTIF-IPYTQIPPR-------KL-RKDCFYHSTPAM  572 (639)
Q Consensus       518 ~~~~~-~~~~~vw--ivg~~~~~~~q~~--------a~~G~~f-~~~~~~~~~-------~~-R~dc~y~~~~a~  572 (639)
                      -+..+ ++++|++  +|++....+|..-        .++|-.. +|-|-++|.       +. ++||.|.+.|+-
T Consensus        83 ~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVS  157 (327)
T KOG0409|consen   83 NSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVS  157 (327)
T ss_pred             CCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEecccc
Confidence            11122 1344443  3666666655432        3444444 888888887       22 399999999974

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=87.86  E-value=1.5  Score=39.85  Aligned_cols=86  Identities=13%  Similarity=0.157  Sum_probs=48.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhc-cCcEEEe---cchhhHHHHHhhCCccccccee-eec--cccccceeEEE--EcCcC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLV-LST--SYAAHKTKIWL--VGDDL  535 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~-~~~~v~~---~~~~~~~~l~~~~~~~~~~~l~-~~~--~~~~~~~~vwi--vg~~~  535 (639)
                      +|.++|++|  .+|+.++..|.+ +++++..   +++++-+.++..-+. .++..+ ..+  .++..++++++  +++..
T Consensus         1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~   77 (122)
T smart00859        1 KVAIVGATG--YVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPH-LKGEVVLELEPEDFEELAVDIVFLALPHGV   77 (122)
T ss_pred             CEEEECCCC--hHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcc-cccccccccccCChhhcCCCEEEEcCCcHH
Confidence            478999999  999999999996 6877766   332222233222111 100101 111  12213566655  45444


Q ss_pred             Chh----hhhcCCCCceeeccc
Q 006607          536 TGK----EQARAPKGTIFIPYT  553 (639)
Q Consensus       536 ~~~----~q~~a~~G~~f~~~~  553 (639)
                      ..+    -+..+.+|.+++|.+
T Consensus        78 ~~~~~~~~~~~~~~g~~viD~s   99 (122)
T smart00859       78 SKEIAPLLPKAAEAGVKVIDLS   99 (122)
T ss_pred             HHHHHHHHHhhhcCCCEEEECC
Confidence            444    233468999999988

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=87.82  E-value=0.54  Score=47.70  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=30.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  +++++
T Consensus         9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~   45 (266)
T PRK06171          9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD   45 (266)
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            46799999998  9999999999999999998  44443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=87.73  E-value=0.58  Score=49.76  Aligned_cols=29  Identities=10%  Similarity=0.184  Sum_probs=25.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|+||  -||+++|+.|+++|.+++.
T Consensus         2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v~   30 (355)
T PRK10217          2 RKILITGGAG--FIGSALVRYIINETSDAVV   30 (355)
T ss_pred             cEEEEEcCCc--HHHHHHHHHHHHcCCCEEE
Confidence            5799999999  9999999999999977543

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=87.57  E-value=1  Score=48.77  Aligned_cols=83  Identities=22%  Similarity=0.148  Sum_probs=57.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--------Ec
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------VG  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------vg  532 (639)
                      .++|-++|.-   .||+++|..|..-|.+|+..++..-+........      ....++++  +.+|+++        --
T Consensus       142 gkTvGIiG~G---~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~------~~~~~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         142 GKTVGIIGLG---RIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGV------VGVDSLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHhCCCeEEEECCCCchhhhccccc------eecccHHHHHhhCCEEEEcCCCCcchh
Confidence            5688889887   9999999999999999999333222211111010      12344554  5666644        23


Q ss_pred             CcCChhhhhcCCCCceeecccc
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                      ..|+.++..+||+|++||-++|
T Consensus       213 g~i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         213 GLINAEELAKMKPGAILINAAR  234 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCC
Confidence            4577889999999999999999

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=87.50  E-value=2.1  Score=45.98  Aligned_cols=101  Identities=14%  Similarity=0.116  Sum_probs=61.5

Q ss_pred             ChhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec---c
Q 006607          448 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---S  520 (639)
Q Consensus       448 nsltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~---~  520 (639)
                      +.+||+..+...  .+..+.|++.|++|  -||.++++.+...|.+|..  +++++.+.++++++.+.-   +...   +
T Consensus       142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v---i~~~~~~~  216 (348)
T PLN03154        142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYKEEPD  216 (348)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE---EECCCccc
Confidence            344555554322  23457899999998  9999999988899999876  778888888765554221   1111   1


Q ss_pred             c----cc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          521 Y----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       521 ~----~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +    ++   ...++++  +|.....+-...+.+|-.++-+.
T Consensus       217 ~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        217 LDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             HHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEEC
Confidence            1    11   2345555  44333334444566666676665

>PRK00779 ornithine carbamoyltransferase; Provisional

Probab=87.47  E-value=3.4  Score=44.38  Aligned_cols=162  Identities=19%  Similarity=0.229  Sum_probs=94.7

Q ss_pred             HHHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHH
Q 006607          405 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVV  455 (639)
Q Consensus       405 ~A~~~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v  455 (639)
                      -|.++|.+++.|+.    +.|+|.+       ....-+.+.|+|+         ..++.|+.+-+         +=+.++
T Consensus        64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti  143 (304)
T PRK00779         64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI  143 (304)
T ss_pred             HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence            36789999999964    3344544       4446677888887         34577776643         113444


Q ss_pred             HhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-cceeE
Q 006607          456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTKI  528 (639)
Q Consensus       456 ~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~~~v  528 (639)
                      .+.... +..+|.++|..+  .+.+..+..|.+-|.+|.+-.++.++   .+.++..++.+.. +.++ +++ + ++++|
T Consensus       144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~g~~-~~~~~d~~~a~~~aDv  220 (304)
T PRK00779        144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKETGAS-IEVTHDPKEAVKGADV  220 (304)
T ss_pred             HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHcCCe-EEEEcCHHHHhCCCCE
Confidence            444432 346899999965  89999999999999999994444332   1221111222233 3333 455 3 88888


Q ss_pred             EEEcCcCChhh---hhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607          529 WLVGDDLTGKE---QARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  572 (639)
Q Consensus       529 wivg~~~~~~~---q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  572 (639)
                      +....|.+..+   |....  ..+-+| +++.+   ..|+|+. .|.+|+.
T Consensus       221 vy~~~w~~~~~~~~~~~~~--~~~~~y-~v~~~~l~~~~~~~ivmHplP~~  268 (304)
T PRK00779        221 VYTDVWVSMGQEAEAEERL--KAFAPY-QVNEELMALAKPDAIFMHCLPAH  268 (304)
T ss_pred             EEecCccccccchhHHHHH--HHhccc-CCCHHHHHhcCCCeEEecCCCcc
Confidence            88766554321   10000  011223 36666   4567765 4777753

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=87.28  E-value=1.2  Score=48.20  Aligned_cols=87  Identities=10%  Similarity=0.064  Sum_probs=54.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-------------cccccceeeeccccc--c
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-------------VEAQHNLVLSTSYAA--H  524 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-------------~~~~~~l~~~~~~~~--~  524 (639)
                      +-++|.|+|+-   -+|+.+|..+++.|.+|++  ++++..+.+++.+.             .+....+-..+++++  +
T Consensus         6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~   82 (321)
T PRK07066          6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVA   82 (321)
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhc
Confidence            45689999986   8999999999999999999  66666655443221             111122223345653  7


Q ss_pred             ceeEEE--EcCcCChhh------hhcCCCCceeec
Q 006607          525 KTKIWL--VGDDLTGKE------QARAPKGTIFIP  551 (639)
Q Consensus       525 ~~~vwi--vg~~~~~~~------q~~a~~G~~f~~  551 (639)
                      +++++|  |-+.++-+.      ...+|+++++.-
T Consensus        83 ~aDlViEavpE~l~vK~~lf~~l~~~~~~~aIlaS  117 (321)
T PRK07066         83 DADFIQESAPEREALKLELHERISRAAKPDAIIAS  117 (321)
T ss_pred             CCCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            887766  222222111      135789986653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=87.27  E-value=0.67  Score=50.37  Aligned_cols=31  Identities=16%  Similarity=0.195  Sum_probs=29.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..++|+|+|+||  -||+++|+.|.++|.+|+.
T Consensus        20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~   50 (370)
T PLN02695         20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA   50 (370)
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence            567899999999  9999999999999999988

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=87.26  E-value=1.6  Score=41.34  Aligned_cols=65  Identities=25%  Similarity=0.312  Sum_probs=42.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccccce--eeec--cccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNL--VLST--SYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l--~~~~--~~~~-~~~~vwiv  531 (639)
                      +|.++||+|  .||+++|..|+..+.  ++.|  +++++.+....++..-.....  ..+.  .+++ ++++|+|+
T Consensus         2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvi   75 (141)
T PF00056_consen    2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVI   75 (141)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEE
Confidence            689999998  999999999995554  4555  666666655554333221111  2233  3666 99988775

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=87.25  E-value=0.89  Score=53.76  Aligned_cols=45  Identities=16%  Similarity=0.207  Sum_probs=38.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++.
T Consensus       413 ~gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~  459 (676)
T TIGR02632       413 ARRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN  459 (676)
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence            357899999998  9999999999999999998  88888877766643

>PRK08309 short chain dehydrogenase; Provisional

Probab=87.22  E-value=0.83  Score=45.05  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=33.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .|+++|+||  -+ .++++.|+++|.+|.+  |++++.+.++.+++
T Consensus         2 ~vlVtGGtG--~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~   44 (177)
T PRK08309          2 HALVIGGTG--ML-KRVSLWLCEKGFHVSVIARREVKLENVKREST   44 (177)
T ss_pred             EEEEECcCH--HH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence            589999986  55 5699999999999988  88888888876554

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=87.16  E-value=1  Score=48.33  Aligned_cols=138  Identities=17%  Similarity=0.210  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607          394 AINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  442 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  442 (639)
                      +-+.-+...++.|++.|++.  .-|.       ++..++++|.|-   ++.+..= |++++.                  
T Consensus        52 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~  131 (299)
T PLN02516         52 DSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHP  131 (299)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCH
Confidence            44455666677888888875  4453       223336677774   3333311 221221                  


Q ss_pred             ----eeecC--C----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          443 ----KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       443 ----rvv~G--n----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                          |+..|  +    .-|++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-        
T Consensus       132 ~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T--------  201 (299)
T PLN02516        132 LNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRT--------  201 (299)
T ss_pred             hhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCC--------
Confidence                33333  1    34677766544     44688999999997  9999999999999999999 2210        


Q ss_pred             CCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607          507 IPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       507 ~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                            .      ++++  ++++|+|  +|+  .++++..   ++|++++|+. +..
T Consensus       202 ------~------nl~~~~~~ADIvv~AvGk~~~i~~~~v---k~gavVIDvG-in~  242 (299)
T PLN02516        202 ------P------DPESIVREADIVIAAAGQAMMIKGDWI---KPGAAVIDVG-TNA  242 (299)
T ss_pred             ------C------CHHHHHhhCCEEEEcCCCcCccCHHHc---CCCCEEEEee-ccc
Confidence                  1      1222  3566666  343  4555555   9999999998 544

>PRK07574 formate dehydrogenase; Provisional

Probab=87.08  E-value=0.98  Score=50.07  Aligned_cols=99  Identities=12%  Similarity=0.220  Sum_probs=64.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-HHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-EKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      ..++|.++|.-   .||+++|+.|..-|.+|...++.+. ....++.+.      ....++++  ++++++++       
T Consensus       191 ~gktVGIvG~G---~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~------~~~~~l~ell~~aDvV~l~lPlt~~  261 (385)
T PRK07574        191 EGMTVGIVGAG---RIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGL------TYHVSFDSLVSVCDVVTIHCPLHPE  261 (385)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCc------eecCCHHHHhhcCCEEEEcCCCCHH
Confidence            35679999985   9999999999999999998322211 111122211      11234554  67777552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  569 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  569 (639)
                       -..++.+....+++|+.+|.++|   ++.+         +++   -|++.++-
T Consensus       262 T~~li~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EP  315 (385)
T PRK07574        262 TEHLFDADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQP  315 (385)
T ss_pred             HHHHhCHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCC
Confidence             23456788899999999999999   4332         444   57777664

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.06  E-value=1.6  Score=46.70  Aligned_cols=138  Identities=17%  Similarity=0.228  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeecC-CCCcce------------------
Q 006607          394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------  442 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k~-p~~L~i------------------  442 (639)
                      +-+.-+...++.|++.|++..-.=         ++..+++||.|-   ++.++.= |++++.                  
T Consensus        39 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p  118 (287)
T PRK14181         39 ASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHP  118 (287)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCCh
Confidence            445556677788899998875442         344457788765   3333311 222321                  


Q ss_pred             ----eeecCC-----hhHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHH
Q 006607          443 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKL  503 (639)
Q Consensus       443 ----rvv~Gn-----sltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l  503 (639)
                          |+..|+     .-|+..|++=     |+-.-++|+++|...  -||+-+|..|.++    +-.|++ .++.     
T Consensus       119 ~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T-----  191 (287)
T PRK14181        119 VNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQS-----  191 (287)
T ss_pred             hhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCC-----
Confidence                233344     2366666664     445689999999997  9999999999988    788888 2111     


Q ss_pred             HhhCCcccccceeeeccccc--cceeEEE--EcC--cCChhhhhcCCCCceeecccccCC
Q 006607          504 KLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       504 ~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                     .++++  ++++|+|  +|+  -++++..   ++|++++|+. +.+
T Consensus       192 ---------------~~l~~~~~~ADIvV~AvG~p~~i~~~~i---k~GavVIDvG-in~  232 (287)
T PRK14181        192 ---------------ENLTEILKTADIIIAAIGVPLFIKEEMI---AEKAVIVDVG-TSR  232 (287)
T ss_pred             ---------------CCHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEec-ccc
Confidence                           01222  4666766  443  4676666   9999999998 554

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=87.03  E-value=0.51  Score=50.67  Aligned_cols=66  Identities=17%  Similarity=0.290  Sum_probs=42.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHHhhCCccc---ccceeee-ccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLKLRIPVEA---QHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~~--~~~~~~~~l~~~~~~~~---~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      +.+|.++|| |  .||+++|..|+.+|..  +.|  .++++.+-...++....   ..+-+.. ++|++ ++++++|+
T Consensus         3 ~~Ki~IiGa-G--~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvi   77 (312)
T cd05293           3 RNKVTVVGV-G--QVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIV   77 (312)
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEE
Confidence            458999997 8  9999999999976764  444  55555544333322211   1122444 35777 89988775

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.01  E-value=0.99  Score=48.38  Aligned_cols=139  Identities=19%  Similarity=0.233  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeeec-CCCCcce-----------------
Q 006607          393 EAINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLER-QPNKLKI-----------------  442 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~k-~p~~L~i-----------------  442 (639)
                      .+-+.-+...++.|++.|++..-.=         ++...+++|.|-   ++.++. -|++++.                 
T Consensus        45 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~  124 (297)
T PRK14168         45 PASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFH  124 (297)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence            3455556677778889998875431         122236677774   323331 1222331                 


Q ss_pred             -----eeecCC------hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHH
Q 006607          443 -----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYE  501 (639)
Q Consensus       443 -----rvv~Gn------sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~  501 (639)
                           |+..|+      .-|+++|++=+     +-.-++|+++|.+.  -||+-+|..|.++    +-.|++ .++-   
T Consensus       125 ~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T---  199 (297)
T PRK14168        125 PVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS---  199 (297)
T ss_pred             hhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC---
Confidence                 333443      34666666644     44678999999997  9999999999988    788888 2111   


Q ss_pred             HHHhhCCcccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          502 KLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       502 ~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                                 .      ++++  ++++|+|  +|  ..++++..   ++|+++||+. ++.
T Consensus       200 -----------~------~l~~~~~~ADIvVsAvGkp~~i~~~~i---k~gavVIDvG-in~  240 (297)
T PRK14168        200 -----------K------NLARHCQRADILIVAAGVPNLVKPEWI---KPGATVIDVG-VNR  240 (297)
T ss_pred             -----------c------CHHHHHhhCCEEEEecCCcCccCHHHc---CCCCEEEecC-CCc
Confidence                       0      1222  3566766  34  35777776   9999999997 554

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.96  E-value=0.86  Score=48.56  Aligned_cols=138  Identities=18%  Similarity=0.236  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHcCCcEEE--ecc-------cccccccccCCce--eeecCC--CCcce------------------
Q 006607          394 AINSLIEEAILEADAKGVKVIS--LGL-------LNQGEELNRNGEI--YLERQP--NKLKI------------------  442 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~~--LG~-------ln~~e~ln~~g~~--~~~k~p--~~L~i------------------  442 (639)
                      +-+.-++.-++.|++.|++..-  |-.       ++..+++|.|-.+  .+...|  ++++.                  
T Consensus        46 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~  125 (284)
T PRK14177         46 ASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTT  125 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCCh
Confidence            3444455666788888887655  322       2233667775421  222332  22331                  


Q ss_pred             ----eeecCC----hhHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCC
Q 006607          443 ----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP  508 (639)
Q Consensus       443 ----rvv~Gn----sltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~  508 (639)
                          |+..|+    .-|++.|++=+     +-.-++|+++|.+.  -||+-+|..|.++|-.|++ .++-          
T Consensus       126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T----------  193 (284)
T PRK14177        126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKT----------  193 (284)
T ss_pred             hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC----------
Confidence                222332    23666666544     34678999999998  9999999999999999999 2111          


Q ss_pred             cccccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          509 VEAQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       509 ~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                          .+      +++  ++++|+|  +|  +.++++..   ++|++++|+. +..
T Consensus       194 ----~~------l~~~~~~ADIvIsAvGk~~~i~~~~i---k~gavVIDvG-in~  234 (284)
T PRK14177        194 ----QN------LPSIVRQADIIVGAVGKPEFIKADWI---SEGAVLLDAG-YNP  234 (284)
T ss_pred             ----CC------HHHHHhhCCEEEEeCCCcCccCHHHc---CCCCEEEEec-Ccc
Confidence                11      221  3566666  34  34677666   9999999998 554

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.96  E-value=0.99  Score=48.01  Aligned_cols=163  Identities=22%  Similarity=0.258  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcce----------eeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~i----------rvv~Gns  449 (639)
                      .+-+.-+...++.|++.|++..  -|.       +++.+++||.|-   ++.++.= |++++.          +=|||=+
T Consensus        43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~  122 (281)
T PRK14183         43 PASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFH  122 (281)
T ss_pred             HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccC
Confidence            3445556667778899998754  342       333346788773   3344321 232331          2244443


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                                      -|++.|++=+     +-.-++|+++|...  -||+-+|..|.++|-.|++ .++  -++|++  
T Consensus       123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~--T~~l~~--  196 (281)
T PRK14183        123 PYNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIF--TKDLKA--  196 (281)
T ss_pred             hhhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCC--CcCHHH--
Confidence                            3677776544     44688999999997  9999999999999999998 211  111111  


Q ss_pred             CcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCceeec-----CCccccC
Q 006607          508 PVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYHS-----TPAMIIP  575 (639)
Q Consensus       508 ~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~~-----~~a~~~P  575 (639)
                                .+    +.++|+|  +|  +.++++..   ++|+++||+. +.+.   ++--|+-+.+     ...+.||
T Consensus       197 ----------~~----~~ADIvV~AvGkp~~i~~~~v---k~gavvIDvG-in~~~~gkl~GDVd~~~~~~~a~~iTPVP  258 (281)
T PRK14183        197 ----------HT----KKADIVIVGVGKPNLITEDMV---KEGAIVIDIG-INRTEDGRLVGDVDFENVAKKCSYITPVP  258 (281)
T ss_pred             ----------HH----hhCCEEEEecCcccccCHHHc---CCCcEEEEee-ccccCCCCeECCccHHHHHhhceEecCCC
Confidence                      00    3555655  34  34666665   9999999998 6652   4445555332     1124466


Q ss_pred             CCCc
Q 006607          576 PSLS  579 (639)
Q Consensus       576 ~~~~  579 (639)
                      +.+.
T Consensus       259 GGVG  262 (281)
T PRK14183        259 GGVG  262 (281)
T ss_pred             CCCh
Confidence            6654

>PLN02928 oxidoreductase family protein

Probab=86.81  E-value=1.4  Score=47.98  Aligned_cols=94  Identities=14%  Similarity=0.128  Sum_probs=59.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccce----eeeccccc--cceeEEEE--
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL----VLSTSYAA--HKTKIWLV--  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l----~~~~~~~~--~~~~vwiv--  531 (639)
                      ..++|.++|.-   .||+++|+.|..-|.+|+.  |+.++-..-...++.+.-..+    ....++++  +.++++++  
T Consensus       158 ~gktvGIiG~G---~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILGYG---AIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            35789999985   9999999999999999988  332211100000010000000    01224444  67777663  


Q ss_pred             ------cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 ------GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 ------g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                            -..++.++..+|++|+++|.++|   |+.+
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~  270 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYD  270 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCccccCHH
Confidence                  34577889999999999999999   5544

>PRK12562 ornithine carbamoyltransferase subunit F; Provisional

Probab=86.78  E-value=2.9  Score=45.61  Aligned_cols=165  Identities=16%  Similarity=0.208  Sum_probs=101.1

Q ss_pred             HHHcCCcEEEeccc----ccccc-------cccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gnsl---------taa~v~  456 (639)
                      +.++|.+++.|+.=    .++|.       |.+..-+.+.|+|+         ..+|+|+.|-|-         =+.++.
T Consensus        67 ~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  146 (334)
T PRK12562         67 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQ  146 (334)
T ss_pred             HHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHhCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            46799999999643    33344       35566677888876         356888887541         245666


Q ss_pred             hcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCCcccccceeeecccc-c-cc
Q 006607          457 NSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLSTSYA-A-HK  525 (639)
Q Consensus       457 ~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~---~~~~~~~~~l~~~~~~~-~-~~  525 (639)
                      +...   -+..+|.++|... +.+++..+..+++-|.++.+-.++.++   .+.+   +...+.+.++....+++ + ++
T Consensus       147 e~~g~~~l~gl~va~vGD~~-~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~  225 (334)
T PRK12562        147 EHLPGKAFNEMTLVYAGDAR-NNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKG  225 (334)
T ss_pred             HHhCCCCcCCcEEEEECCCC-CCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCC
Confidence            6553   2357999999863 469999999888999999983333322   1111   11122233322233565 4 88


Q ss_pred             eeEEEEcCcCChhhhhc--CCCCceeecccccCCc--CC--CCCcee-ecCCcc
Q 006607          526 TKIWLVGDDLTGKEQAR--APKGTIFIPYTQIPPR--KL--RKDCFY-HSTPAM  572 (639)
Q Consensus       526 ~~vwivg~~~~~~~q~~--a~~G~~f~~~~~~~~~--~~--R~dc~y-~~~~a~  572 (639)
                      ++|+....|.+..+|..  ...-..|-+|. ++++  +.  |+||.+ |.+|+.
T Consensus       226 aDvvyt~~w~sm~~~~~~~~~~~~~~~~y~-v~~ell~~a~~~~~i~mHcLP~~  278 (334)
T PRK12562        226 ADFIYTDVWVSMGEPKEKWAERIALLRGYQ-VNSKMMALTGNPQVKFLHCLPAF  278 (334)
T ss_pred             CCEEEEcCccccccchhhHHHHHHhccCCc-CCHHHHHhhcCCCCEEECCCCCC
Confidence            88888877765443321  01112455664 8888  32  688875 888873

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=86.74  E-value=1.7  Score=37.45  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=26.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~  494 (639)
                      ..+++.++|+ |  .+|+.++++|++. +.++.+
T Consensus        22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v   52 (86)
T cd05191          22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVL   52 (86)
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEE
Confidence            4678999999 7  9999999999987 677777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=86.56  E-value=0.91  Score=47.76  Aligned_cols=28  Identities=25%  Similarity=0.300  Sum_probs=26.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+|+|+||  -||+++|+.|.++|.+|++
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~   29 (338)
T PRK10675          2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI   29 (338)
T ss_pred             eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence            589999999  9999999999999999987

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=86.37  E-value=1.2  Score=45.06  Aligned_cols=40  Identities=15%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +|.++|++|  .+|+++|+.|++.|.+|.+  |++++.++++++
T Consensus         2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999888  9999999999999999988  888888887765

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=86.24  E-value=1.1  Score=48.96  Aligned_cols=82  Identities=17%  Similarity=0.161  Sum_probs=58.8

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeeccccc
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  523 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  523 (639)
                      -|++.|++=+     +-.-++|+|+|...  -||+-+|..|.++|-.|++ .++-              .      ++++
T Consensus       196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T--------------~------nl~~  253 (345)
T PLN02897        196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFT--------------K------DPEQ  253 (345)
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCC--------------C------CHHH
Confidence            4666666544     44688999999997  9999999999999999999 2111              0      1121


Q ss_pred             --cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          524 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       524 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                        +++||+|  +|  ..++++..   ++|+++||+. +.+
T Consensus       254 ~~~~ADIvIsAvGkp~~v~~d~v---k~GavVIDVG-in~  289 (345)
T PLN02897        254 ITRKADIVIAAAGIPNLVRGSWL---KPGAVVIDVG-TTP  289 (345)
T ss_pred             HHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence              3667766  33  34677666   9999999998 555

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=86.22  E-value=1.1  Score=47.15  Aligned_cols=40  Identities=25%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ++|.++|+.   .+|+++|..|++.|.+|++  ++++.+++.++.
T Consensus         4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (287)
T PRK08293          4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER   45 (287)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            579999985   9999999999999999999  788877776654

>PLN02240 UDP-glucose 4-epimerase

Probab=86.22  E-value=1.1  Score=47.39  Aligned_cols=29  Identities=21%  Similarity=0.288  Sum_probs=27.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+++|+||  -||+++++.|.++|.+|+.
T Consensus         6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~   34 (352)
T PLN02240          6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV   34 (352)
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999988

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=86.02  E-value=1.9  Score=46.25  Aligned_cols=100  Identities=20%  Similarity=0.181  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeeec-CCCCcce----------eeecCCh
Q 006607          393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS  449 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gns  449 (639)
                      .+-+.-++..++.|++.|+++  .-|-       +++..+++|.|-   ++.++. -|++++.          +=|||=+
T Consensus        44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~  123 (296)
T PRK14188         44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH  123 (296)
T ss_pred             hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence            345556777888999999984  4443       223336788884   434442 1333431          2245543


Q ss_pred             ----------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       450 ----------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                                      -|+++|++=+     +-.-++|.++|.++  -+|+.+|+.|.++|..|++
T Consensus       124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv  187 (296)
T PRK14188        124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTI  187 (296)
T ss_pred             hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEE
Confidence                            3566666433     44688999999998  9999999999999999999

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=85.96  E-value=1.3  Score=45.62  Aligned_cols=28  Identities=11%  Similarity=0.173  Sum_probs=25.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC--cEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~--~~v~~  494 (639)
                      +|+++|+||  .||+++++.|.++|  .+|+.
T Consensus         1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~   30 (317)
T TIGR01181         1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV   30 (317)
T ss_pred             CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence            489999999  99999999999877  78876

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK02102 ornithine carbamoyltransferase; Validated

Probab=85.77  E-value=8.7  Score=41.86  Aligned_cols=163  Identities=18%  Similarity=0.159  Sum_probs=95.9

Q ss_pred             HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++-|+.=    .++|.+       .+..-+.+.|+|+         ..+++|+.|-+         +=+.++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (331)
T PRK02102         68 AIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRMYDGIEYRGFKQEIVEELAKYSGVPVWNGLTDEWHPTQMLADFMTMK  147 (331)
T ss_pred             HHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhcCCEEEEECCchHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            44899999998753    344554       5566677888877         24677877644         1234555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHH---HHh---hCCcccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEK---LKL---RIPVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~---l~~---~~~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +.... +..+|+++|... +.+.+..+..|++-|.+|.+-.++.++.   +.+   +.....+.. +.++ +.+ + +++
T Consensus       148 e~~g~l~g~~va~vGd~~-~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~-~~~~~d~~ea~~~a  225 (331)
T PRK02102        148 EHFGPLKGLKLAYVGDGR-NNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREIAKETGAK-ITITEDPEEAVKGA  225 (331)
T ss_pred             HHhCCCCCCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHHHHHcCCe-EEEEcCHHHHhCCC
Confidence            54432 457999999973 3689999999999999998833333321   111   111122233 3334 465 4 888


Q ss_pred             eEEEEcCcCChhhhh-cCCCCceeecccccCCc--C--CCCCce-eecCCc
Q 006607          527 KIWLVGDDLTGKEQA-RAPKGTIFIPYTQIPPR--K--LRKDCF-YHSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~~q~-~a~~G~~f~~~~~~~~~--~--~R~dc~-y~~~~a  571 (639)
                      +|+..+.|.+..+.. +...-..+-+| |++.+  +  .++||. .|.+|+
T Consensus       226 Dvvyt~~w~~~~~~~~~~~~~~~~~~y-~vt~ell~~~~~~d~ivmH~lP~  275 (331)
T PRK02102        226 DVIYTDVWVSMGEEDEWEERIKLLKPY-QVNMDLMKATGNPDVIFMHCLPA  275 (331)
T ss_pred             CEEEEcCcccCccccchHHHHHhccCC-cCCHHHHhhhcCCCCEEECCCCC
Confidence            887776554311100 00011223445 38877  4  368887 478886

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=85.75  E-value=0.66  Score=49.45  Aligned_cols=102  Identities=21%  Similarity=0.222  Sum_probs=68.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCCcccccceeeeccc-cc-cceeEEE--------E
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPVEAQHNLVLSTSY-AA-HKTKIWL--------V  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~~~~~~~l~~~~~~-~~-~~~~vwi--------v  531 (639)
                      +|.++|--   ..|...|.-|-++|.+|.+  |++++ -+.++++ +...      ..+. ++ +.++++|        |
T Consensus         2 kIafIGLG---~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~-Ga~~------a~s~~eaa~~aDvVitmv~~~~~V   71 (286)
T COG2084           2 KIAFIGLG---IMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA-GATV------AASPAEAAAEADVVITMLPDDAAV   71 (286)
T ss_pred             eEEEEcCc---hhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc-CCcc------cCCHHHHHHhCCEEEEecCCHHHH
Confidence            57788865   8999999999999999999  88787 5555443 2222      1222 22 4555544        3


Q ss_pred             cCcCCh--hhhhcCCCCceeecccccCCcCCC--------CCceeecCCccccCC
Q 006607          532 GDDLTG--KEQARAPKGTIFIPYTQIPPRKLR--------KDCFYHSTPAMIIPP  576 (639)
Q Consensus       532 g~~~~~--~~q~~a~~G~~f~~~~~~~~~~~R--------~dc~y~~~~a~~~P~  576 (639)
                      .+.+..  .=...++||++|||.|-++|...|        +-+.|.+-|++--+.
T Consensus        72 ~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~  126 (286)
T COG2084          72 RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVP  126 (286)
T ss_pred             HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCch
Confidence            333332  123457899999999999998221        667788888875333

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=85.69  E-value=2.7  Score=46.52  Aligned_cols=110  Identities=19%  Similarity=0.305  Sum_probs=71.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--cc-----------ccceeeeccccc--ccee
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYAA--HKTK  527 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~~--~~~~  527 (639)
                      +|.++|..   .+|.++|..|++.|.+|+.  +++++.+.|++....  +.           ..++...+++++  ++++
T Consensus         2 kI~vIGlG---~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         2 KIAVIGLG---YVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             EEEEECCC---chhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            58889975   9999999999999999999  888999988764211  00           112222334553  5666


Q ss_pred             EEE--EcCcCCh-------------hhh-hcCCCCceeecccccCCc---CC-------------CCCceeecCCccccC
Q 006607          528 IWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-------------RKDCFYHSTPAMIIP  575 (639)
Q Consensus       528 vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-------------R~dc~y~~~~a~~~P  575 (639)
                      ++|  |++...+             ++. ..+++|++++.-|-+||.   ++             ..||.+..+|..-.|
T Consensus        79 vvii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~  158 (411)
T TIGR03026        79 VIIICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLRE  158 (411)
T ss_pred             EEEEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCC
Confidence            644  6654321             111 235889999998877776   11             136666777766666


Q ss_pred             CC
Q 006607          576 PS  577 (639)
Q Consensus       576 ~~  577 (639)
                      +.
T Consensus       159 G~  160 (411)
T TIGR03026       159 GN  160 (411)
T ss_pred             CC
Confidence            65

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=85.65  E-value=0.99  Score=45.34  Aligned_cols=40  Identities=20%  Similarity=0.300  Sum_probs=30.5

Q ss_pred             cccCchhhHHHHHHHHhccCcEEEe--cchhh----HHHHHhhCCc
Q 006607          470 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIPV  509 (639)
Q Consensus       470 Gatg~~kig~ava~~L~~~~~~v~~--~~~~~----~~~l~~~~~~  509 (639)
                      |++..+-||++||+.|+++|.+|++  |++++    ++++.++.+.
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~   46 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA   46 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC
Confidence            4552238999999999999999999  77776    5666665553

...

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=85.63  E-value=2  Score=47.43  Aligned_cols=39  Identities=18%  Similarity=0.306  Sum_probs=34.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +|+++|+ |  .+|+++|+.|+++|.+|.+  +++++.++++++
T Consensus         2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~   42 (453)
T PRK09496          2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQDR   42 (453)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh
Confidence            6899998 6  9999999999999999999  788898888763

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=85.54  E-value=1.4  Score=45.30  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=39.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+|+++|.++  -||++.|..+.+-|-+|.+  |+++++++.+++.|.
T Consensus         6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~   51 (245)
T COG3967           6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE   51 (245)
T ss_pred             cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence            3679998874  8999999999999999999  999999999999766

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=85.52  E-value=1.4  Score=48.85  Aligned_cols=45  Identities=18%  Similarity=0.303  Sum_probs=36.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~--~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|++  +  +.++++++.++++
T Consensus       209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~  257 (450)
T PRK08261        209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG  257 (450)
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence            457899999998  9999999999999999998  3  3456777766654

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=85.40  E-value=1.3  Score=50.67  Aligned_cols=92  Identities=15%  Similarity=0.156  Sum_probs=56.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC--------cc-----c---cccee-eeccccc-
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP--------VE-----A---QHNLV-LSTSYAA-  523 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~--------~~-----~---~~~l~-~~~~~~~-  523 (639)
                      ++|.++|+-   .+|+.||..|++.|.+|++  ++++.+++..+++.        .+     .   ....+ ..+++++ 
T Consensus         6 ~kV~VIGaG---~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l   82 (503)
T TIGR02279         6 VTVAVIGAG---AMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL   82 (503)
T ss_pred             cEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence            469999995   9999999999999999999  88888775432211        11     0   01112 2335665 


Q ss_pred             cceeEEE--EcCcCChhhh------hcCCCCceee-cccccCCc
Q 006607          524 HKTKIWL--VGDDLTGKEQ------ARAPKGTIFI-PYTQIPPR  558 (639)
Q Consensus       524 ~~~~vwi--vg~~~~~~~q------~~a~~G~~f~-~~~~~~~~  558 (639)
                      ++|+++|  |-+.++-++.      ..+|++++++ .-|-+++.
T Consensus        83 ~~aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl~i~  126 (503)
T TIGR02279        83 ADAGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSLSIT  126 (503)
T ss_pred             CCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence            7887776  3222222221      2468888876 45545544

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=85.35  E-value=2.3  Score=45.58  Aligned_cols=140  Identities=19%  Similarity=0.267  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeeecC-CCCcce-----------------
Q 006607          393 EAINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI-----------------  442 (639)
Q Consensus       393 ~~in~~I~~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~k~-p~~L~i-----------------  442 (639)
                      .+-+.-++..++.|++.|+++.-.  .       +++.++++|.|-   ++.++.= |++++.                 
T Consensus        43 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~  122 (295)
T PRK14174         43 PASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFH  122 (295)
T ss_pred             hHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence            344555667778899999887544  2       444457788885   3344311 222331                 


Q ss_pred             -----eeecCC------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhc----cCcEEEe--cchhhH
Q 006607          443 -----KVVDGS------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDY  500 (639)
Q Consensus       443 -----rvv~Gn------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~----~~~~v~~--~~~~~~  500 (639)
                           |+..|.      .-|+++|++-+.     -.-++|+++|...  -||+-+|..|.+    +|..|++  .++..+
T Consensus       123 ~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l  200 (295)
T PRK14174        123 PENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDI  200 (295)
T ss_pred             hhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhH
Confidence                 222332      257777776554     3578999999997  999999999986    7888888  211111


Q ss_pred             HHHHhhCCcccccceeeeccccccceeEEE--Ec--CcCChhhhhcCCCCceeecccccCC
Q 006607          501 EKLKLRIPVEAQHNLVLSTSYAAHKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       501 ~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      +   +.+                +.++++|  +|  +.++++..   ++|++++|++ ++.
T Consensus       201 ~---~~~----------------~~ADIvI~Avg~~~li~~~~v---k~GavVIDVg-i~~  238 (295)
T PRK14174        201 P---SYT----------------RQADILIAAIGKARFITADMV---KPGAVVIDVG-INR  238 (295)
T ss_pred             H---HHH----------------HhCCEEEEecCccCccCHHHc---CCCCEEEEee-ccc
Confidence            1   110                3556666  33  34676666   9999999998 554

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=85.32  E-value=2.7  Score=43.48  Aligned_cols=86  Identities=16%  Similarity=0.195  Sum_probs=58.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----cc---c-cceeEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW  529 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw  529 (639)
                      ....|++.|++|  .+|.++++.+...|.++..  ++.++.+.+++. +.+   .++...  +    ++   . +..+++
T Consensus       139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~i~~~~~~~~~d~v  212 (324)
T cd08292         139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRAL-GIG---PVVSTEQPGWQDKVREAAGGAPISVA  212 (324)
T ss_pred             CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-CCC---EEEcCCCchHHHHHHHHhCCCCCcEE
Confidence            356899999998  9999999988899999887  777787877663 321   112111  1    11   1 346776


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 006607          530 L--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       530 i--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +  +|.....+-.+.++++.+|+.+.
T Consensus       213 ~d~~g~~~~~~~~~~l~~~g~~v~~g  238 (324)
T cd08292         213 LDSVGGKLAGELLSLLGEGGTLVSFG  238 (324)
T ss_pred             EECCCChhHHHHHHhhcCCcEEEEEe
Confidence            6  55545555566777888888886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK12367 short chain dehydrogenase; Provisional

Probab=85.18  E-value=1.1  Score=45.84  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+  |++
T Consensus        14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~   48 (245)
T PRK12367         14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK   48 (245)
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence            46899999998  9999999999999999987  554

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=85.17  E-value=1.4  Score=46.62  Aligned_cols=102  Identities=14%  Similarity=0.101  Sum_probs=63.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--EcCc-CCh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDD-LTG  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~-~~~  537 (639)
                      +|.++|. |  .+|.++|+.|.+.|.+|.+  |++++.++++++-.... ..   ..++. . +++++++  +-+. +++
T Consensus         2 ~Ig~IGl-G--~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~s---~~~~~~~~~~~dvIi~~vp~~~~~~   74 (298)
T TIGR00872         2 QLGLIGL-G--RMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-AN---LRELSQRLSAPRVVWVMVPHGIVDA   74 (298)
T ss_pred             EEEEEcc-h--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-CC---HHHHHhhcCCCCEEEEEcCchHHHH
Confidence            5888996 5  9999999999999999998  89999998887521111 00   11222 1 3455543  2111 111


Q ss_pred             --hh-hhcCCCCceeecccccCCcCC--------CCCceeecCCccc
Q 006607          538 --KE-QARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI  573 (639)
Q Consensus       538 --~~-q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~  573 (639)
                        ++ ....++|.++++.+-.+|...        ++.+.|.+.|++-
T Consensus        75 v~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsG  121 (298)
T TIGR00872        75 VLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSG  121 (298)
T ss_pred             HHHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCC
Confidence              11 223578999999987665511        1456677777654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=85.14  E-value=1.1  Score=50.44  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=45.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-------Cc--EEEe--cchhhHHHHHhhCCcccc---cceeeec--cccc-cc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-------GI--KVAT--ICKDDYEKLKLRIPVEAQ---HNLVLST--SYAA-HK  525 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-------~~--~v~~--~~~~~~~~l~~~~~~~~~---~~l~~~~--~~~~-~~  525 (639)
                      .-+|.++||+|  .||+++|..|+.+       ++  ++.+  +++++.+-...++.....   .+ +.++  +|++ ++
T Consensus       100 ~~KV~IIGAaG--~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~-v~i~~~~ye~~kd  176 (444)
T PLN00112        100 LINVAVSGAAG--MISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLRE-VSIGIDPYEVFQD  176 (444)
T ss_pred             CeEEEEECCCc--HHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCc-eEEecCCHHHhCc
Confidence            45899999998  9999999999977       66  4555  777877755555433221   12 3333  4776 88


Q ss_pred             eeEEEE
Q 006607          526 TKIWLV  531 (639)
Q Consensus       526 ~~vwiv  531 (639)
                      ++|+|+
T Consensus       177 aDiVVi  182 (444)
T PLN00112        177 AEWALL  182 (444)
T ss_pred             CCEEEE
Confidence            888664

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=85.02  E-value=1.5  Score=43.97  Aligned_cols=45  Identities=22%  Similarity=0.343  Sum_probs=34.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--~~~l~~~~~  508 (639)
                      ..+.|+++|+++  -||+++|+.|+++|.+|++  ++.++  .+.+.+...
T Consensus         4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~   52 (251)
T COG1028           4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK   52 (251)
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence            457899999996  8999999999999999776  44443  455555433

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.97  E-value=1.1  Score=44.45  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=27.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~   34 (235)
T PRK06550          5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG   34 (235)
T ss_pred             CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            46799999998  9999999999999999988

>PLN02527 aspartate carbamoyltransferase

Probab=84.94  E-value=7.3  Score=41.93  Aligned_cols=159  Identities=15%  Similarity=0.226  Sum_probs=95.3

Q ss_pred             HHHcCCcEEEecc------ccccccc-------ccCCceeeecCCC---------CcceeeecCCh----------hHHH
Q 006607          406 ADAKGVKVISLGL------LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS----------LAAA  453 (639)
Q Consensus       406 A~~~G~kv~~LG~------ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa  453 (639)
                      +.++|.+++.|+.      +.++|.+       ++..-+.+.|+|+         ...++|+.+-+          .=+.
T Consensus        61 ~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~g~~~HPtQ~LaDl~  140 (306)
T PLN02527         61 MKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATAEIPVINAGDGPGQHPTQALLDVY  140 (306)
T ss_pred             HHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHhCcEEEEECCChhHHHHHHHhCCCCEEECCCCCCCChHHHHHHHH
Confidence            4589999999965      2345554       6677788889986         35688887622          1245


Q ss_pred             HHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-cc
Q 006607          454 VVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HK  525 (639)
Q Consensus       454 ~v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~  525 (639)
                      ++.+.... +..+|+++|..+-+.+.+..+..|++. |.++.+-.++.|+   .+.+++. +.+.+ +.++ +.+ + ++
T Consensus       141 Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~~a~~~  218 (306)
T PLN02527        141 TIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIKDYLT-SKGVE-WEESSDLMEVASK  218 (306)
T ss_pred             HHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHHHHHH-HcCCE-EEEEcCHHHHhCC
Confidence            56555432 457999999863137899999998886 9999883343332   2222221 22333 3344 565 4 88


Q ss_pred             eeEEEEcCcCChhhhhcCCCCcee----ecccccCCc---CCCCCce-eecCC
Q 006607          526 TKIWLVGDDLTGKEQARAPKGTIF----IPYTQIPPR---KLRKDCF-YHSTP  570 (639)
Q Consensus       526 ~~vwivg~~~~~~~q~~a~~G~~f----~~~~~~~~~---~~R~dc~-y~~~~  570 (639)
                      ++|+.. ++++.|+..  .+-..+    =+| |++.+   ..|+||. .|.+|
T Consensus       219 aDvvyt-~~~q~e~~~--~~~~~~~~~~~~y-~v~~~ll~~a~~~~ivmHclP  267 (306)
T PLN02527        219 CDVLYQ-TRIQRERFG--ERIDLYEAARGKY-IVDKKVMDVLPKHAVVMHPLP  267 (306)
T ss_pred             CCEEEE-CCcchhhhc--chHHHHHHhCCCc-eECHHHHhccCCCCEEECCCC
Confidence            988887 555533210  000111    123 37766   4567874 56666

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=84.85  E-value=1.7  Score=44.52  Aligned_cols=110  Identities=12%  Similarity=0.160  Sum_probs=64.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE---EEe--cc----hhhH-------HHHHhhCCcccccceeeecccc-c-
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC----KDDY-------EKLKLRIPVEAQHNLVLSTSYA-A-  523 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~---v~~--~~----~~~~-------~~l~~~~~~~~~~~l~~~~~~~-~-  523 (639)
                      ...+|++.||-   ..|++||..|++.|++   +.+  |+    ++|-       +++.++.+..   . .. .++. + 
T Consensus        24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~---~-~~-~~l~~~l   95 (226)
T cd05311          24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPE---K-TG-GTLKEAL   95 (226)
T ss_pred             cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccC---c-cc-CCHHHHH
Confidence            46789999995   7999999999999985   777  55    3442       2333332111   1 11 1342 3 


Q ss_pred             cceeEEEE---cCcCChhhhhcCCCCceeecccccCCc-----CC-CCCc-eeecCCccccCCCCccc
Q 006607          524 HKTKIWLV---GDDLTGKEQARAPKGTIFIPYTQIPPR-----KL-RKDC-FYHSTPAMIIPPSLSNM  581 (639)
Q Consensus       524 ~~~~vwiv---g~~~~~~~q~~a~~G~~f~~~~~~~~~-----~~-R~dc-~y~~~~a~~~P~~~~~~  581 (639)
                      .+++++|-   .--++++..+.+.++.++.|.+ -|..     +. +..| ++.++..| +|.--+|+
T Consensus        96 ~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls-nP~~e~~~~~A~~~ga~i~a~G~~~-~~~Q~nn~  161 (226)
T cd05311          96 KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA-NPVPEIWPEEAKEAGADIVATGRSD-FPNQVNNV  161 (226)
T ss_pred             hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC-CCCCcCCHHHHHHcCCcEEEeCCCC-Ccccccee
Confidence            56777662   2235677777777776666887 3322     11 2467 46666444 44444444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=84.80  E-value=2.3  Score=43.54  Aligned_cols=36  Identities=22%  Similarity=0.342  Sum_probs=32.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      +++.++|+.   .+|+.+|+-|.++|..|++  +++++.++
T Consensus         1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~   38 (225)
T COG0569           1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE   38 (225)
T ss_pred             CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence            368889988   9999999999999999999  88888876

>PRK02255 putrescine carbamoyltransferase; Provisional

Probab=84.75  E-value=9.3  Score=41.75  Aligned_cols=162  Identities=20%  Similarity=0.225  Sum_probs=94.3

Q ss_pred             HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taa~v~  456 (639)
                      +.++|.+++.|+.=    +++|.+       ++..-+.+.|++.         ..+++|+.|.+=         =..++.
T Consensus        64 ~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y~D~iviR~~~~~~~~~~a~~~~vPVINa~~~~~HPtQaLaDl~Ti~  143 (338)
T PRK02255         64 MTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRLVDIIMARVDRHQTVVELAKYATVPVINGMSDYNHPTQELGDLFTMI  143 (338)
T ss_pred             HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCcEEEEecCChHHHHHHHHhCCCCEEECCCCCCChHHHHHHHHHHH
Confidence            45799999999643    233433       4444456666654         345788877652         245666


Q ss_pred             hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCCcccccceeeec-ccc-c
Q 006607          457 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A  523 (639)
Q Consensus       457 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~-~  523 (639)
                      +..+    -+..+|.++|..+  .+.+..+..|++-|.+|.+-.++.|       +.+++.+. .++.. +.++ +++ +
T Consensus       144 e~~g~g~~l~glkv~~vGD~~--~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~-~~g~~-~~~~~d~~ea  219 (338)
T PRK02255        144 EHLPEGKKLEDCKVVFVGDAT--QVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENCE-VSGGS-VLVTDDVDEA  219 (338)
T ss_pred             HHhCCCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHHH-hcCCe-EEEEcCHHHH
Confidence            6653    2356999999975  8999999999999999999333322       22222211 12223 3333 455 4


Q ss_pred             -cceeEEEEcCcCChhhhhcCC-C-Cceeec-ccccCCc---CCCCCce-eecCCcc
Q 006607          524 -HKTKIWLVGDDLTGKEQARAP-K-GTIFIP-YTQIPPR---KLRKDCF-YHSTPAM  572 (639)
Q Consensus       524 -~~~~vwivg~~~~~~~q~~a~-~-G~~f~~-~~~~~~~---~~R~dc~-y~~~~a~  572 (639)
                       ++++|+..+-|.+...|...+ + =..|.| | |++.+   ..++||. .|.+|+-
T Consensus       220 v~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y-~v~~ell~~a~~~~ivmHpLP~~  275 (338)
T PRK02255        220 VKDADFVYTDVWYGLYDAELSEEERMAIFYPKY-QVTPELMAKAGPHAKFMHCLPAT  275 (338)
T ss_pred             hCCCCEEEEcccHhhccchhhHHHHHHhhCCCc-eECHHHHhccCCCCEEeCCCCCc
Confidence             778887775554211110000 0 012233 4 37777   5568887 4888864

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=84.63  E-value=2.9  Score=49.21  Aligned_cols=31  Identities=19%  Similarity=0.215  Sum_probs=27.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~  494 (639)
                      ..++|+|+|+||  =||+.+++.|.++ |.+|..
T Consensus       314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~  345 (660)
T PRK08125        314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYG  345 (660)
T ss_pred             cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEE
Confidence            366899999999  9999999999975 799987

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=84.62  E-value=1.2  Score=44.56  Aligned_cols=31  Identities=26%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.++++|++|  -||+++|+.|+++|.+|.+
T Consensus         7 ~~k~vlItGas~--~iG~~la~~l~~~G~~v~~   37 (252)
T PRK08220          7 SGKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG   37 (252)
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence            346899999998  9999999999999999998

>PLN02858 fructose-bisphosphate aldolase

Probab=84.51  E-value=1.4  Score=56.14  Aligned_cols=176  Identities=12%  Similarity=0.103  Sum_probs=104.1

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccc--cccc-cCCceee---ecC-CCCcceeeecCC----------
Q 006607          386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQG--EELN-RNGEIYL---ERQ-PNKLKIKVVDGS----------  448 (639)
Q Consensus       386 y~~~~~~~~in~~I~~Ai~~A~~~G~kv~~LG~ln~~--e~ln-~~g~~~~---~k~-p~~L~irvv~Gn----------  448 (639)
                      |.-.|..+-+.|-+.-|...|++.|+..-...+..+.  +..+ |.|+.-.   .|. .+.-.+++.+-|          
T Consensus       234 ~~~~F~l~l~~KDl~la~~~A~~~g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~~~~~~~~~~~~~~~~~  313 (1378)
T PLN02858        234 YIEGRFLNVLVQNLGIVLDMAKSLPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGVNILEAANRELYKPEDL  313 (1378)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCCCccccccccccChHHH
Confidence            3334556777788999999999999987655444443  1111 1122100   000 000001222222          


Q ss_pred             --hhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-
Q 006607          449 --SLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  523 (639)
Q Consensus       449 --sltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-  523 (639)
                        -+|.+      ||..++|-++|--   .+|+++|+.|.+.|.+|..  |+.++.++++++-.       ....+.++ 
T Consensus       314 ~~~~~~~------~~~~~~IGfIGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga-------~~~~s~~e~  377 (1378)
T PLN02858        314 AKQITMQ------AKPVKRIGFIGLG---AMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGG-------LAGNSPAEV  377 (1378)
T ss_pred             HHHhhcc------ccCCCeEEEECch---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------eecCCHHHH
Confidence              22222      3445789999865   9999999999999999998  88888888876511       01223332 


Q ss_pred             -cceeEEE--EcC------cCC-hh-hhhcCCCCceeecccccCCcCC----------CCCceeecCCccccCCC
Q 006607          524 -HKTKIWL--VGD------DLT-GK-EQARAPKGTIFIPYTQIPPRKL----------RKDCFYHSTPAMIIPPS  577 (639)
Q Consensus       524 -~~~~vwi--vg~------~~~-~~-~q~~a~~G~~f~~~~~~~~~~~----------R~dc~y~~~~a~~~P~~  577 (639)
                       +++++++  |.+      .+. +. -...+++|.++++.|-++|...          +++..|.+.|.+--|..
T Consensus       378 ~~~aDvVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~  452 (1378)
T PLN02858        378 AKDVDVLVIMVANEVQAENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKR  452 (1378)
T ss_pred             HhcCCEEEEecCChHHHHHHHhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhh
Confidence             5566644  321      111 11 1234589999999999888722          26888999888765553

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=84.38  E-value=0.77  Score=46.81  Aligned_cols=33  Identities=18%  Similarity=0.230  Sum_probs=28.7

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      |+++|++|  -||+++++.|.++|.+|..  |+.+..
T Consensus         1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            68999999  9999999999999999987  655543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=84.35  E-value=2.3  Score=43.13  Aligned_cols=86  Identities=13%  Similarity=0.128  Sum_probs=52.9

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEec-chhhHHHHHhh-CCcccc--cceeeec-cccc--cceeEEEEc
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATI-CKDDYEKLKLR-IPVEAQ--HNLVLST-SYAA--HKTKIWLVG  532 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~-~~~~~~~l~~~-~~~~~~--~~l~~~~-~~~~--~~~~vwivg  532 (639)
                      +-.-++|+++|...  -||+-+|..|.++|-.|++- +..-+..-+.. +..+..  .+   .+ .+++  +.++|+|++
T Consensus        59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~---~~~~l~~~~~~ADIVIsA  133 (197)
T cd01079          59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTD---EEAMTLDCLSQSDVVITG  133 (197)
T ss_pred             CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccc---hhhHHHHHhhhCCEEEEc
Confidence            45688999999997  99999999999999999982 11111100000 001110  01   01 1333  567777743


Q ss_pred             Cc-----CChhhhhcCCCCceeeccc
Q 006607          533 DD-----LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       533 ~~-----~~~~~q~~a~~G~~f~~~~  553 (639)
                      -+     ++++..   ++|+++||+.
T Consensus       134 vG~~~~~i~~d~i---k~GavVIDVG  156 (197)
T cd01079         134 VPSPNYKVPTELL---KDGAICINFA  156 (197)
T ss_pred             cCCCCCccCHHHc---CCCcEEEEcC
Confidence            32     455544   9999999998

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=84.26  E-value=2.6  Score=44.55  Aligned_cols=103  Identities=16%  Similarity=0.095  Sum_probs=66.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cc---eeEEE--EcCc-
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWL--VGDD-  534 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg~~-  534 (639)
                      +|-++|.-   .+|+++|+.|.+.|.+|++  |++++.+.+++. +...      ..+.++  +.   +++++  +-+. 
T Consensus         2 ~Ig~IGlG---~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~------~~s~~~~~~~~~~advVi~~vp~~~   71 (299)
T PRK12490          2 KLGLIGLG---KMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA------RHSLEELVSKLEAPRTIWVMVPAGE   71 (299)
T ss_pred             EEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee------cCCHHHHHHhCCCCCEEEEEecCch
Confidence            47788854   9999999999999999998  888888888653 2111      113332  21   44544  2221 


Q ss_pred             -CCh--hhh-hcCCCCceeecccccCCc-------CC-CCCceeecCCccccCCC
Q 006607          535 -LTG--KEQ-ARAPKGTIFIPYTQIPPR-------KL-RKDCFYHSTPAMIIPPS  577 (639)
Q Consensus       535 -~~~--~~q-~~a~~G~~f~~~~~~~~~-------~~-R~dc~y~~~~a~~~P~~  577 (639)
                       +..  ++. ..+++|.++++.|.++|.       ++ ++.+.|.+.|.+--|..
T Consensus        72 ~~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~  126 (299)
T PRK12490         72 VTESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWG  126 (299)
T ss_pred             HHHHHHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHH
Confidence             111  122 235789999999988876       11 25788999888865543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=84.03  E-value=1.6  Score=42.92  Aligned_cols=27  Identities=22%  Similarity=0.397  Sum_probs=25.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      |+++||||  =||+++++.|.++|.+|+.
T Consensus         1 IlI~GatG--~iG~~l~~~l~~~g~~v~~   27 (236)
T PF01370_consen    1 ILITGATG--FIGSALVRQLLKKGHEVIV   27 (236)
T ss_dssp             EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred             EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence            78999999  9999999999999999665

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=83.87  E-value=7.2  Score=41.40  Aligned_cols=28  Identities=14%  Similarity=0.164  Sum_probs=25.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+|.+.|+-   .+|+++|+.|++.|.+|.+
T Consensus         5 m~I~iiG~G---~~G~~lA~~l~~~G~~V~~   32 (308)
T PRK14619          5 KTIAILGAG---AWGSTLAGLASANGHRVRV   32 (308)
T ss_pred             CEEEEECcc---HHHHHHHHHHHHCCCEEEE
Confidence            468999986   9999999999999999999

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=83.83  E-value=1.5  Score=47.01  Aligned_cols=138  Identities=22%  Similarity=0.299  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeeecC-CCCcc----------eeeecCCh-
Q 006607          394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS-  449 (639)
Q Consensus       394 ~in~~I~~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~k~-p~~L~----------irvv~Gns-  449 (639)
                      +-+.-+....+.|++.|++..  -|.       +++.++++|.|-   ++.+..= |++++          .+=|||=+ 
T Consensus        44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~  123 (297)
T PRK14167         44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP  123 (297)
T ss_pred             HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence            444456667778888888764  343       333446788875   4344321 22233          12244443 


Q ss_pred             ---------------hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhcc----CcEEEe-cchhhHHHHH
Q 006607          450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLK  504 (639)
Q Consensus       450 ---------------ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~----~~~v~~-~~~~~~~~l~  504 (639)
                                     -|+.+|++=+     +-.-++|+++|...  -||+-+|..|.++    +..|++ .++-      
T Consensus       124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T------  195 (297)
T PRK14167        124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRT------  195 (297)
T ss_pred             hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCC------
Confidence                           4677766544     44678999999997  9999999999987    788888 2111      


Q ss_pred             hhCCcccccceeeeccccc--cceeEEEE--cC--cCChhhhhcCCCCceeecccccCC
Q 006607          505 LRIPVEAQHNLVLSTSYAA--HKTKIWLV--GD--DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       505 ~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~--~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                              .      ++++  +.++|+|+  |+  .++++..   ++|+++||+. +.+
T Consensus       196 --------~------~l~~~~~~ADIvIsAvGkp~~i~~~~i---k~gaiVIDvG-in~  236 (297)
T PRK14167        196 --------D------DLAAKTRRADIVVAAAGVPELIDGSML---SEGATVIDVG-INR  236 (297)
T ss_pred             --------C------CHHHHHhhCCEEEEccCCcCccCHHHc---CCCCEEEEcc-ccc
Confidence                    1      1221  35667663  53  5777666   9999999998 554

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=83.72  E-value=1.7  Score=46.35  Aligned_cols=64  Identities=20%  Similarity=0.306  Sum_probs=43.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc---ccc-eeeeccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA---QHN-LVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~---~~~-l~~~~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .+|+++|..|+++|.  ++.+  +++++.+.+..++....   ..+ .+....+++ ++++++|+
T Consensus         2 kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIi   74 (306)
T cd05291           2 KVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVI   74 (306)
T ss_pred             EEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            6899997 6  899999999999895  5676  77787777766653321   111 122234555 88888764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=83.64  E-value=2.3  Score=48.92  Aligned_cols=41  Identities=24%  Similarity=0.395  Sum_probs=36.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +.+|.+||..   ++|+.+|+.|.++|.++++  .|+|+.++++++
T Consensus       417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~  459 (558)
T PRK10669        417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER  459 (558)
T ss_pred             CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence            6789999998   9999999999999999998  888888888764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=83.57  E-value=4  Score=42.47  Aligned_cols=99  Identities=18%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--cc-
Q 006607          449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SY-  521 (639)
Q Consensus       449 sltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~~-  521 (639)
                      -+||+-.+...  .+....|++.|++|  .+|.++++.+...|.+|..  +++++.+.+++ ++.+.   ++...  ++ 
T Consensus       128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~---vi~~~~~~~~  201 (329)
T cd08294         128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA---VFNYKTVSLE  201 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEeCCCccHH
Confidence            34554444322  23457899999998  9999999988899999876  78888888876 44322   12111  11 


Q ss_pred             ---cc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          522 ---AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       522 ---~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                         ++   ...++++  +|.....+-.+.+++|-+++.+.
T Consensus       202 ~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g  241 (329)
T cd08294         202 EALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG  241 (329)
T ss_pred             HHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEc
Confidence               11   2345555  33322233344556666677665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=83.53  E-value=1.6  Score=47.21  Aligned_cols=121  Identities=17%  Similarity=0.177  Sum_probs=81.6

Q ss_pred             cccccCCceeeecCCCCcceeeecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          423 EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       423 e~ln~~g~~~~~k~p~~L~irvv~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      |.-||+.++...=.|.                      -...+|.+.|.-   -+|.--|+...--|-+|++  +|-+|+
T Consensus       150 ek~~GG~GvllgGvpG----------------------V~~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl  204 (371)
T COG0686         150 EKTNGGKGVLLGGVPG----------------------VLPAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRL  204 (371)
T ss_pred             HhccCCceeEecCCCC----------------------CCCccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHH
Confidence            3367777766655554                      134568888876   7899999999999999999  999999


Q ss_pred             HHHHhhCCcccccceeeecc--ccc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc----CCC--
Q 006607          501 EKLKLRIPVEAQHNLVLSTS--YAA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLR--  561 (639)
Q Consensus       501 ~~l~~~~~~~~~~~l~~~~~--~~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R--  561 (639)
                      ..|...-...  .....++.  +++  ..++++|         .=+-++.|.+++|+||++.+|++ ++.-    ..|  
T Consensus       205 ~~ldd~f~~r--v~~~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpGsVivDVA-iDqGGc~Et~~~T  281 (371)
T COG0686         205 RQLDDLFGGR--VHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVTREMVKQMKPGSVIVDVA-IDQGGCFETSHPT  281 (371)
T ss_pred             hhhhHhhCce--eEEEEcCHHHHHHHhhhccEEEEEEEecCCCCceehhHHHHHhcCCCcEEEEEE-EcCCCceeccccc
Confidence            9887763332  11123442  543  4555544         22456778899999999999999 7665    223  


Q ss_pred             --CCceeecCCc
Q 006607          562 --KDCFYHSTPA  571 (639)
Q Consensus       562 --~dc~y~~~~a  571 (639)
                        +|=+|.+-+.
T Consensus       282 Th~~PtY~~~gv  293 (371)
T COG0686         282 THDDPTYEVDGV  293 (371)
T ss_pred             cCCCCceeecCE
Confidence              5555655554

>PRK13243 glyoxylate reductase; Reviewed

Probab=83.45  E-value=2.1  Score=46.35  Aligned_cols=97  Identities=8%  Similarity=0.087  Sum_probs=64.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|- |  .||+.+|+.|...|.+|..  ++.+...  ..+..       +...++++  ++++++++      
T Consensus       149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~~~-------~~~~~l~ell~~aDiV~l~lP~t~  216 (333)
T PRK13243        149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEA--EKELG-------AEYRPLEELLRESDFVSLHVPLTK  216 (333)
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhh--HHHcC-------CEecCHHHHHhhCCEEEEeCCCCh
Confidence            4678999998 5  9999999999999999988  3322211  11111       11224443  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP  570 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~  570 (639)
                        -..++.+....+++|+.++.++|   ++.+         +++   -|++..+-+
T Consensus       217 ~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~  272 (333)
T PRK13243        217 ETYHMINEERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPY  272 (333)
T ss_pred             HHhhccCHHHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCC
Confidence              23456688899999999999999   4443         222   488877643

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=83.39  E-value=2  Score=38.20  Aligned_cols=39  Identities=23%  Similarity=0.285  Sum_probs=33.1

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      |+++|..   .+|+.+++.|.+.+.+|++  +++++.++++++-
T Consensus         1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~   41 (116)
T PF02254_consen    1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG   41 (116)
T ss_dssp             EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred             eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence            6789987   9999999999998888888  8888889887773

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=83.38  E-value=4.3  Score=41.33  Aligned_cols=41  Identities=20%  Similarity=0.205  Sum_probs=35.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .+.|++.|++|  .+|.++++.+..+|.+|.+  +++++.+.+++
T Consensus       145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  187 (325)
T cd08253         145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVRQ  187 (325)
T ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            46899999987  9999999999999999888  77778777743

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=83.07  E-value=4.2  Score=41.99  Aligned_cols=86  Identities=15%  Similarity=0.229  Sum_probs=54.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----cc---c-cceeEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YA---A-HKTKIW  529 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~---~-~~~~vw  529 (639)
                      ....|++.|++|  .+|.++++.+..+|.++..  +++++.+.++ +++..   .++...  +    ++   . +..+++
T Consensus       138 ~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~v  211 (323)
T cd05282         138 PGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD---EVIDSSPEDLAQRVKEATGGAGARLA  211 (323)
T ss_pred             CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC---EEecccchhHHHHHHHHhcCCCceEE
Confidence            457899999998  9999999999999999887  7778888775 33321   111111  1    11   1 345666


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 006607          530 L--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       530 i--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +  +|.....+-.+.++++-+|+.+.
T Consensus       212 l~~~g~~~~~~~~~~l~~~g~~v~~g  237 (323)
T cd05282         212 LDAVGGESATRLARSLRPGGTLVNYG  237 (323)
T ss_pred             EECCCCHHHHHHHHhhCCCCEEEEEc
Confidence            6  33333333444666777777665

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=82.97  E-value=1.8  Score=45.67  Aligned_cols=40  Identities=13%  Similarity=0.287  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ++|.++|+.   .+|+++|..|.+.|.+|++  +++++.++++++
T Consensus         5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            579999996   9999999999999999999  788888888764

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=82.83  E-value=1.4  Score=47.61  Aligned_cols=25  Identities=8%  Similarity=0.203  Sum_probs=22.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI  490 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~  490 (639)
                      -+|.++||+|  .||+++|..|+.+|+
T Consensus         4 ~KV~IIGa~G--~VG~~~a~~l~~~~~   28 (323)
T TIGR01759         4 VRVAVTGAAG--QIGYSLLFRIASGEL   28 (323)
T ss_pred             eEEEEECCCc--HHHHHHHHHHHhCCc
Confidence            3799999999  999999999997776

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=82.82  E-value=2.8  Score=43.56  Aligned_cols=101  Identities=18%  Similarity=0.123  Sum_probs=61.8

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceee--ecc
Q 006607          450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVL--STS  520 (639)
Q Consensus       450 ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~--~~~  520 (639)
                      +||+..++.+.     ++...|++.|++|  .+|.++++.+..+|.+|..  +++++.+.+++ ++.+.-.+.-.  ...
T Consensus       129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~  205 (326)
T cd08289         129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEVIPREELQEES  205 (326)
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEEEcchhHHHHH
Confidence            35555554432     2456899999998  9999999999999999887  78888888854 44321111000  001


Q ss_pred             ccc---cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          521 YAA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       521 ~~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +++   ..+++++  +|.....+-...++++-+++.+.
T Consensus       206 ~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g  243 (326)
T cd08289         206 IKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSG  243 (326)
T ss_pred             HHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEe
Confidence            111   3356666  33333334455667777788876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=82.63  E-value=3.8  Score=41.54  Aligned_cols=42  Identities=19%  Similarity=0.269  Sum_probs=35.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ....|++.|++|  .+|.++++.+...|.++.+  +++++.+.+++
T Consensus       139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  182 (323)
T cd05276         139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACRA  182 (323)
T ss_pred             CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence            356899999997  9999999999999999887  77778877743

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=82.53  E-value=3.5  Score=44.67  Aligned_cols=94  Identities=15%  Similarity=0.192  Sum_probs=61.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCc---
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD---  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~---  534 (639)
                      ..++|.++|..   .||+++|+.|...|.+|..  ++.+.....   +        ....++++  ++++++++--.   
T Consensus       145 ~g~~VgIIG~G---~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~---~--------~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        145 KNMTVAIIGTG---RIGAATAKIYAGFGATITAYDAYPNKDLDF---L--------TYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEEeCChhHhhhh---h--------hccCCHHHHHhcCCEEEEeCCCcH
Confidence            34579999986   9999999999999999999  333221100   0        01224543  66666553333   


Q ss_pred             -----CChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607          535 -----LTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  569 (639)
Q Consensus       535 -----~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  569 (639)
                           +..+...++++|++++.++|   ++..         +++   -|++..+-
T Consensus       211 ~t~~li~~~~l~~mk~gavlIN~aRG~~vd~~aL~~aL~~g~i~gaalDV~~~EP  265 (330)
T PRK12480        211 ESYHLFDKAMFDHVKKGAILVNAARGAVINTPDLIAAVNDGTLLGAAIDTYENEA  265 (330)
T ss_pred             HHHHHHhHHHHhcCCCCcEEEEcCCccccCHHHHHHHHHcCCeeEEEEeccCCCC
Confidence                 34467778999999999999   5544         222   47777664

>cd00704 MDH Malate dehydrogenase

Probab=82.35  E-value=1.5  Score=47.49  Aligned_cols=24  Identities=17%  Similarity=0.325  Sum_probs=21.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI  490 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~  490 (639)
                      +|.++||+|  .||+.+|..|+.+|+
T Consensus         2 KV~IiGAaG--~VG~~~a~~L~~~~~   25 (323)
T cd00704           2 HVLITGAAG--QIGYNLLFLIASGEL   25 (323)
T ss_pred             EEEEECCCc--HHHHHHHHHHHhCCc
Confidence            689999999  999999999997664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=82.34  E-value=2.6  Score=48.41  Aligned_cols=100  Identities=20%  Similarity=0.224  Sum_probs=65.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  531 (639)
                      ..++|.++|--   .||+++|+.|...|.+|...++..-.+-..+.+..      .+.++++  ++++++++        
T Consensus       137 ~gktvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDvV~l~lPlt~~T  207 (525)
T TIGR01327       137 YGKTLGVIGLG---RIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVE------LVDDLDELLARADFITVHTPLTPET  207 (525)
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCE------EcCCHHHHHhhCCEEEEccCCChhh
Confidence            45789999985   99999999999999999883221101111111111      1234554  66776552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecCC
Q 006607          532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHSTP  570 (639)
Q Consensus       532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~~  570 (639)
                      -..++.+...++++|++++.++|   ++..         +++   -|++..+-|
T Consensus       208 ~~li~~~~l~~mk~ga~lIN~aRG~~vde~aL~~aL~~g~i~gAaLDVf~~EP~  261 (525)
T TIGR01327       208 RGLIGAEELAKMKKGVIIVNCARGGIIDEAALYEALEEGHVRAAALDVFEKEPP  261 (525)
T ss_pred             ccCcCHHHHhcCCCCeEEEEcCCCceeCHHHHHHHHHcCCeeEEEEecCCCCCC
Confidence            23456788999999999999999   4433         444   677776643

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=82.16  E-value=1.4  Score=48.34  Aligned_cols=39  Identities=18%  Similarity=0.224  Sum_probs=32.5

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecch
Q 006607          457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK  497 (639)
Q Consensus       457 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~  497 (639)
                      +.++++..+|.++|.+|  .+|..+|+.|.+.|..|.+.+.
T Consensus        92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~  130 (374)
T PRK11199         92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQ  130 (374)
T ss_pred             cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCC
Confidence            33444667899999999  9999999999999999999443

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=82.13  E-value=4.1  Score=42.82  Aligned_cols=148  Identities=8%  Similarity=0.113  Sum_probs=83.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE-----
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL-----  530 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi-----  530 (639)
                      .+|.++|. |  .+|.++++.|.+.|.    ++..  |++++.++++++.+.+.      .++.++  ++++++|     
T Consensus         3 ~~IgfIG~-G--~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~------~~~~~e~~~~aDiIiLavkP   73 (272)
T PRK12491          3 KQIGFIGC-G--NMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITI------TTNNNEVANSADILILSIKP   73 (272)
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEE------eCCcHHHHhhCCEEEEEeCh
Confidence            46899995 4  999999999998774    5666  77888888876543211      123332  5666655     


Q ss_pred             --EcCcCChhhhh-cCCCCceeecccc-cCCcCCCC----Cc--e--eecCCc-------cccCC-------------CC
Q 006607          531 --VGDDLTGKEQA-RAPKGTIFIPYTQ-IPPRKLRK----DC--F--YHSTPA-------MIIPP-------------SL  578 (639)
Q Consensus       531 --vg~~~~~~~q~-~a~~G~~f~~~~~-~~~~~~R~----dc--~--y~~~~a-------~~~P~-------------~~  578 (639)
                        +.+.+  ++.. ..++|++++++.- ++.+++++    .|  .  .|.+|+       ...|+             =+
T Consensus        74 ~~~~~vl--~~l~~~~~~~~lvISi~AGi~i~~l~~~l~~~~~vvR~MPN~~~~vg~g~t~~~~~~~~~~~~~~~v~~lf  151 (272)
T PRK12491         74 DLYSSVI--NQIKDQIKNDVIVVTIAAGKSIKSTENEFDRKLKVIRVMPNTPVLVGEGMSALCFNEMVTEKDIKEVLNIF  151 (272)
T ss_pred             HHHHHHH--HHHHHhhcCCcEEEEeCCCCcHHHHHHhcCCCCcEEEECCChHHHHcCceEEEEeCCCCCHHHHHHHHHHH
Confidence              22222  1221 1456788888765 44442221    11  1  111111       11121             13


Q ss_pred             ccccccccccCcchhhhHHHHHHHHHhcCCCCCccch-h-hhhHHHHHHHHHhcCCcc
Q 006607          579 SNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQ-T-MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       579 ~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e~G~-i-v~~i~~iw~aa~kHGF~p  634 (639)
                      +-++.| .+++.+++.|+.|-           .-||. - -.=||..-+++.+.||..
T Consensus       152 ~~~G~~-~~~~E~~~d~~tal-----------sgsgPAf~~~~~eal~~a~v~~Gl~~  197 (272)
T PRK12491        152 NIFGQT-EVVNEKLMDVVTSI-----------SGSSPAYVYMFIEAMADAAVLGGMPR  197 (272)
T ss_pred             HcCCCE-EEEcHHHhhhHHHh-----------ccCcHHHHHHHHHHHHHHHHHcCCCH
Confidence            444445 46666666665442           13665 3 467778888888888764

>PLN00016 RNA-binding protein; Provisional

Probab=82.09  E-value=1.3  Score=48.01  Aligned_cols=38  Identities=21%  Similarity=0.217  Sum_probs=32.4

Q ss_pred             cCCCcEEEEe----cccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          460 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       460 ~~~~~~V~~~----Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ....++|+|+    |+||  -||+.+++.|.++|.+|+.  |+++.
T Consensus        49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            3456789999    9999  9999999999999999998  65543

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=82.04  E-value=2.8  Score=45.16  Aligned_cols=139  Identities=21%  Similarity=0.272  Sum_probs=77.4

Q ss_pred             HcCCcEEEeccc-ccc---cccccCCceeeecCCCCcceeeecCChh-----HHHHHHhc---CcCCCcEEEEecccCch
Q 006607          408 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNS---LPKTTAHVLLRGTVTAN  475 (639)
Q Consensus       408 ~~G~kv~~LG~l-n~~---e~ln~~g~~~~~k~p~~L~irvv~Gnsl-----taa~v~~~---i~~~~~~V~~~Gatg~~  475 (639)
                      +-|=+|+.+|.. ..+   |-.+-+.. .+.+.|++|.  ....-++     ||+..+.+   ++. ..+|++.||+|  
T Consensus        80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~-~~~~~P~~ls--~~eAAal~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaG--  153 (326)
T COG0604          80 KVGDRVAALGGVGRDGGYAEYVVVPAD-WLVPLPDGLS--FEEAAALPLAGLTAWLALFDRAGLKP-GETVLVHGAAG--  153 (326)
T ss_pred             CCCCEEEEccCCCCCCcceeEEEecHH-HceeCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCC-CCEEEEecCCc--
Confidence            567788887511 011   33333333 2334465222  2223333     77777777   222 67899999998  


Q ss_pred             hhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccc-----ee-eeccccc-cceeEEE--EcCcCChhhhhcCC
Q 006607          476 KVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN-----LV-LSTSYAA-HKTKIWL--VGDDLTGKEQARAP  544 (639)
Q Consensus       476 kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~-----l~-~~~~~~~-~~~~vwi--vg~~~~~~~q~~a~  544 (639)
                      -||++..+.+...|..+..  .++++.+ +.+++......+     ++ ++..+.. +..++++  ||...-.+-.....
T Consensus       154 gVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~  232 (326)
T COG0604         154 GVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA  232 (326)
T ss_pred             hHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence            9999999999999854333  6677777 445555543222     12 1222221 4567766  55544444444455


Q ss_pred             CCceeeccc
Q 006607          545 KGTIFIPYT  553 (639)
Q Consensus       545 ~G~~f~~~~  553 (639)
                      +|-.++.+-
T Consensus       233 ~~G~lv~ig  241 (326)
T COG0604         233 PGGRLVSIG  241 (326)
T ss_pred             cCCEEEEEe
Confidence            555555544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=81.66  E-value=1.3  Score=47.56  Aligned_cols=97  Identities=15%  Similarity=0.205  Sum_probs=62.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc--------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG--------  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg--------  532 (639)
                      .++|.++|--   +||+++|+.|..-|.+|...++.+     +..+ +.... ....++++  ++++++++-        
T Consensus       136 g~tvgIvG~G---~IG~~vA~~l~afG~~V~~~~~~~-----~~~~-~~~~~-~~~~~l~e~l~~aDvvv~~lPlt~~T~  205 (312)
T PRK15469        136 DFTIGILGAG---VLGSKVAQSLQTWGFPLRCWSRSR-----KSWP-GVQSF-AGREELSAFLSQTRVLINLLPNTPETV  205 (312)
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCC-----CCCC-Cceee-cccccHHHHHhcCCEEEECCCCCHHHH
Confidence            4688899876   999999999999999998822211     0000 10000 11223543  677776632        


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCCc---------CCC---CCceeecC
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQ---IPPR---------KLR---KDCFYHST  569 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~---------~~R---~dc~y~~~  569 (639)
                      ..++.+...++++|++++.++|   |+.+         ++|   -|++..+-
T Consensus       206 ~li~~~~l~~mk~ga~lIN~aRG~vVde~aL~~aL~~g~i~gaalDVf~~EP  257 (312)
T PRK15469        206 GIINQQLLEQLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFSREP  257 (312)
T ss_pred             HHhHHHHHhcCCCCcEEEECCCccccCHHHHHHHHhcCCeeeEEecCCCCCC
Confidence            2345567889999999999999   5544         344   48877663

>PLN02996 fatty acyl-CoA reductase

Probab=81.61  E-value=1.5  Score=49.94  Aligned_cols=25  Identities=12%  Similarity=0.272  Sum_probs=22.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM  488 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~  488 (639)
                      +.+.|+|+||||  -||++++..|.+.
T Consensus        10 ~~k~VlvTGaTG--FlG~~ll~~LL~~   34 (491)
T PLN02996         10 ENKTILVTGATG--FLAKIFVEKILRV   34 (491)
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhh
Confidence            456899999999  9999999998864

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=81.60  E-value=1.6  Score=45.87  Aligned_cols=26  Identities=19%  Similarity=0.305  Sum_probs=23.1

Q ss_pred             EEecccCchhhHHHHHHHHhccC--cEEEe
Q 006607          467 LLRGTVTANKVANAVASSLCQMG--IKVAT  494 (639)
Q Consensus       467 ~~~Gatg~~kig~ava~~L~~~~--~~v~~  494 (639)
                      +|+|++|  =||+.+++.|.++|  .+|..
T Consensus         1 LVTGgsG--flG~~iv~~Ll~~g~~~~Vr~   28 (280)
T PF01073_consen    1 LVTGGSG--FLGSHIVRQLLERGYIYEVRV   28 (280)
T ss_pred             CEEcCCc--HHHHHHHHHHHHCCCceEEEE
Confidence            5899999  99999999999999  56665

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]

Probab=81.59  E-value=2.6  Score=46.07  Aligned_cols=139  Identities=18%  Similarity=0.248  Sum_probs=86.6

Q ss_pred             eeecCCCCcceeeecCChhHHHHHH-hcCcC--CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCC
Q 006607          432 YLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIP  508 (639)
Q Consensus       432 ~~~k~p~~L~irvv~Gnsltaa~v~-~~i~~--~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~  508 (639)
                      +..--|.-|++|-.|--+.+-+.+. +++.+  .+.+|.++|=.   +.|+-.|..|-+.|-.+..-++++|+++++..+
T Consensus        18 ~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdyssaa~~yg   94 (480)
T KOG2380|consen   18 FLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDYSSAAEKYG   94 (480)
T ss_pred             eeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchhHHHHHHhc
Confidence            3444444455666654444443332 22222  46678888865   899999999999999999966677999999977


Q ss_pred             cccccceeeeccccccceeEEEEcCcC-Chhh------hhcCCCCceeecccc--cCCc-----CCCCCceeecCCcccc
Q 006607          509 VEAQHNLVLSTSYAAHKTKIWLVGDDL-TGKE------QARAPKGTIFIPYTQ--IPPR-----KLRKDCFYHSTPAMII  574 (639)
Q Consensus       509 ~~~~~~l~~~~~~~~~~~~vwivg~~~-~~~~------q~~a~~G~~f~~~~~--~~~~-----~~R~dc~y~~~~a~~~  574 (639)
                      ...=.+   ..++-++..++++.-.-+ +-|.      -.+...||+|.++..  -|++     -+-+||-.+.+-.|-=
T Consensus        95 ~~~ft~---lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlctHpmfG  171 (480)
T KOG2380|consen   95 SAKFTL---LHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCTHPMFG  171 (480)
T ss_pred             cccccc---HHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEeecCCcC
Confidence            655222   111223566665521111 1111      113477899988765  2333     2349999999998887


Q ss_pred             CC
Q 006607          575 PP  576 (639)
Q Consensus       575 P~  576 (639)
                      |+
T Consensus       172 Pk  173 (480)
T KOG2380|consen  172 PK  173 (480)
T ss_pred             CC
Confidence            77

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=81.59  E-value=2.3  Score=50.76  Aligned_cols=42  Identities=12%  Similarity=0.124  Sum_probs=35.4

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      |++-++|.|+||-   -+|+.||..+++.|++|++  .+.+.+++-+
T Consensus       310 ~~~i~~v~ViGaG---~mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~  353 (714)
T TIGR02437       310 AKDVKQAAVLGAG---IMGGGIAYQSASKGTPIVMKDINQHSLDLGL  353 (714)
T ss_pred             ccccceEEEECCc---hHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            4567789999998   8999999999999999999  7777766543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PRK11891 aspartate carbamoyltransferase; Provisional

Probab=81.59  E-value=6.3  Score=44.42  Aligned_cols=166  Identities=17%  Similarity=0.243  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHcCCcEEEecc-----cccccc-------cccCCceeeecCCC---------CcceeeecCCh--------
Q 006607          399 IEEAILEADAKGVKVISLGL-----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS--------  449 (639)
Q Consensus       399 I~~Ai~~A~~~G~kv~~LG~-----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns--------  449 (639)
                      -|.|+   .++|.+++.|+.     +.++|.       |++..-+.+.|+|.         ..+|+|+.|-+        
T Consensus       144 FE~A~---~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y~D~IviR~~~~~~~~e~A~~s~vPVINAgdg~~~HPtQ  220 (429)
T PRK11891        144 FGAAF---CRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGYVDALVIRHPEQGSVAEFARATNLPVINGGDGPGEHPSQ  220 (429)
T ss_pred             HHHHH---HHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHhCCEEEEeCCchhHHHHHHHhCCCCEEECCCCCCCCcHH
Confidence            45554   489999999954     344554       45667778888876         46789998643        


Q ss_pred             --hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCCcccccceeee
Q 006607          450 --LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLS  518 (639)
Q Consensus       450 --ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~  518 (639)
                        +=..++.+..+     .+..+|+++|...-+.+++..+..||+. |.+|.+-.++.|+   .+.+++. +.+.. +.+
T Consensus       221 aLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~-~~G~~-v~~  298 (429)
T PRK11891        221 ALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQIS-RNGHV-IEQ  298 (429)
T ss_pred             HHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHH-hcCCe-EEE
Confidence              22556666542     2357999999972228899999999975 9999983434332   2222211 12333 333


Q ss_pred             c-ccc-c-cceeEEEEcCcCChhhhhcCCCCceeecccccCCc---C-CCCCce-eecCCc
Q 006607          519 T-SYA-A-HKTKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---K-LRKDCF-YHSTPA  571 (639)
Q Consensus       519 ~-~~~-~-~~~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~-~R~dc~-y~~~~a  571 (639)
                      + +.+ + ++++|+...- +..|+......-..+-+| |++.+   . .++||. .|.+|+
T Consensus       299 ~~d~~eav~~ADVVYt~~-~q~er~~~~~~~~~~~~y-~vt~ell~~~ak~dai~MHcLPr  357 (429)
T PRK11891        299 TDDLAAGLRGADVVYATR-IQKERFADESFEGYTPDF-QINQALVDAVCKPDTLIMHPLPR  357 (429)
T ss_pred             EcCHHHHhCCCCEEEEcC-chhhcccCHHHHHhccCC-cCCHHHHhCccCCCcEEECCCCC
Confidence            3 455 4 8888888743 332222100001123344 38877   3 467877 567885

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=81.55  E-value=2.9  Score=49.09  Aligned_cols=45  Identities=20%  Similarity=0.286  Sum_probs=39.0

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +++.+++|.++|..   .+|+.+|+.|.++|+++++  .|+++.++++++
T Consensus       396 ~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~  442 (621)
T PRK03562        396 IDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF  442 (621)
T ss_pred             cccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence            33446789999998   9999999999999999988  888899988764

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=81.41  E-value=3  Score=45.32  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=28.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ...|+|+|+.|  =||+.++..|-++|..|++
T Consensus         2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~   31 (343)
T KOG1371|consen    2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVI   31 (343)
T ss_pred             CcEEEEecCCc--ceehHHHHHHHhCCCcEEE
Confidence            46899999999  9999999999999999999

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=81.31  E-value=5.3  Score=41.37  Aligned_cols=89  Identities=13%  Similarity=0.132  Sum_probs=54.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccc------ee-eeccccc-cceeEEE-
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN------LV-LSTSYAA-HKTKIWL-  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~------l~-~~~~~~~-~~~~vwi-  530 (639)
                      ....|++.|+.|  -+|.++++.+..+|.++..  +++++.+.+++ .+.+.-.+      +. ++..... +..++++ 
T Consensus       140 ~~~~vlI~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  216 (334)
T PTZ00354        140 KGQSVLIHAGAS--GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLD  216 (334)
T ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCcEEEecCChhHHHHHHHHHhCCCCceEEEE
Confidence            346899999998  9999999999999999766  88888888854 33211000      00 0111111 3445555 


Q ss_pred             -EcCcCChhhhhcCCCCceeeccc
Q 006607          531 -VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       531 -vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                       +|.....+-.+.+++|-.|+.+.
T Consensus       217 ~~~~~~~~~~~~~l~~~g~~i~~~  240 (334)
T PTZ00354        217 CVGGSYLSETAEVLAVDGKWIVYG  240 (334)
T ss_pred             CCchHHHHHHHHHhccCCeEEEEe
Confidence             23233344455667777787765

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=81.22  E-value=5.5  Score=40.79  Aligned_cols=100  Identities=15%  Similarity=0.071  Sum_probs=59.9

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc----cee-eecc
Q 006607          450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH----NLV-LSTS  520 (639)
Q Consensus       450 ltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~----~l~-~~~~  520 (639)
                      +||+..++.+-  +....|++.|++|  .+|.++++.+..+|.+|..  +++++.+.++ +++.+.-.    .+. .+..
T Consensus       128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~i~~  204 (320)
T cd08243         128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVIDDGAIAEQLRA  204 (320)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEecCccHHHHHHH
Confidence            44555554442  2346999999998  9999999999999999877  6777777774 33321100    000 0111


Q ss_pred             ccccceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          521 YAAHKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       521 ~~~~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      + .+..++++  +|.....+-.+..+++-+|+.+.
T Consensus       205 ~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g  238 (320)
T cd08243         205 A-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTG  238 (320)
T ss_pred             h-CCCceEEEECCChHHHHHHHHHhccCCEEEEEc
Confidence            1 12345555  33333344455667777777766

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=81.10  E-value=5.9  Score=41.16  Aligned_cols=88  Identities=14%  Similarity=0.165  Sum_probs=55.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----ccc---cceeEEE-
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA---HKTKIWL-  530 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~---~~~~vwi-  530 (639)
                      ...|++.|++|  .+|.++++.+.+.|.+|..  ++.++.+.++++++...   .+...  +    +.+   ...++++ 
T Consensus       146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~v~~~~~~~~d~vi~  220 (329)
T cd05288         146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDA---AINYKTPDLAEALKEAAPDGIDVYFD  220 (329)
T ss_pred             CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCce---EEecCChhHHHHHHHhccCCceEEEE
Confidence            47899999987  9999999999999999877  77788887776444321   11111  1    111   2345555 


Q ss_pred             -EcCcCChhhhhcCCCCceeeccccc
Q 006607          531 -VGDDLTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       531 -vg~~~~~~~q~~a~~G~~f~~~~~~  555 (639)
                       +|...-.+-.+.++++-+++.+...
T Consensus       221 ~~g~~~~~~~~~~l~~~G~~v~~g~~  246 (329)
T cd05288         221 NVGGEILDAALTLLNKGGRIALCGAI  246 (329)
T ss_pred             cchHHHHHHHHHhcCCCceEEEEeec
Confidence             3332223334456677778877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=80.79  E-value=6.6  Score=40.54  Aligned_cols=43  Identities=21%  Similarity=0.311  Sum_probs=35.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ...|++.|++|  .+|.++++.+...|.+|.+  +++++.+.++ +++
T Consensus       147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g  191 (325)
T cd05280         147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLG  191 (325)
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence            45899999998  9999999888899999876  7788888774 344

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=80.55  E-value=1.8  Score=39.73  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=26.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~  498 (639)
                      +.++++|++|  -||+++++.|+++|. .|.+  |+++
T Consensus         1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence            3689999998  999999999999886 5655  5443

It uses NADPH to reduce the keto group to a hydroxy group.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=80.29  E-value=6.9  Score=40.46  Aligned_cols=42  Identities=19%  Similarity=0.168  Sum_probs=35.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ....|++.|++|  .+|.++++.+...|.+|..  ++.++.+.+++
T Consensus       162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  205 (332)
T cd08259         162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILKE  205 (332)
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence            355799999998  9999999999999999877  77777777744

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK05442 malate dehydrogenase; Provisional

Probab=80.26  E-value=1.6  Score=47.23  Aligned_cols=26  Identities=8%  Similarity=0.204  Sum_probs=22.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI  490 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~  490 (639)
                      -.+|.++||+|  .||+.+|..|+.+|+
T Consensus         4 ~~KV~IiGaaG--~VG~~~a~~l~~~~~   29 (326)
T PRK05442          4 PVRVAVTGAAG--QIGYSLLFRIASGDM   29 (326)
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHhhhh
Confidence            34899999998  999999999997666

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=80.16  E-value=2.7  Score=45.87  Aligned_cols=129  Identities=12%  Similarity=0.141  Sum_probs=70.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc---EEEe----cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE-
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT----ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL-  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~~----~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi-  530 (639)
                      ...+|+++||||  .+|+.+.+.|.+++.   ++..    |+.++-...       ...+++ +.++.  + +++++++ 
T Consensus         6 ~~~kVaVvGAtG--~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-------~~~~~~-v~~~~~~~~~~~D~vf~   75 (344)
T PLN02383          6 NGPSVAIVGVTG--AVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-------EGRDYT-VEELTEDSFDGVDIALF   75 (344)
T ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-------cCceeE-EEeCCHHHHcCCCEEEE
Confidence            345899999999  999999999997654   3322    222211111       112222 22222  2 5667655 


Q ss_pred             -EcCcCChhhhhcC-CCCceeecccccCCc-CCCCCceeecCCccccCCCC-cccccccccc-Ccchhhh--HHHHHHHH
Q 006607          531 -VGDDLTGKEQARA-PKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSL-SNMHSCENWL-GRRVMSA--WRIAGIIH  603 (639)
Q Consensus       531 -vg~~~~~~~q~~a-~~G~~f~~~~~~~~~-~~R~dc~y~~~~a~~~P~~~-~~~~~~e~~~-pr~~~~A--c~a~~~v~  603 (639)
                       +|...+.+--.++ .+|+.+||.|-   . .+++|+.      ..+|+-- +.+..-+..- +++.+.-  |.+-++++
T Consensus        76 a~p~~~s~~~~~~~~~~g~~VIDlS~---~fR~~~~~p------~~vPEvn~~~i~~~~~~~~~~~iIanPgC~~t~~~l  146 (344)
T PLN02383         76 SAGGSISKKFGPIAVDKGAVVVDNSS---AFRMEEGVP------LVIPEVNPEAMKHIKLGKGKGALIANPNCSTIICLM  146 (344)
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEECCc---hhhcCCCCc------eECCCcCHHHHHhhhhcccCCcEEECCCcHHHHHHH
Confidence             6777666655444 67999998882   1 3334443      3355521 1111000000 1233333  99999998


Q ss_pred             HhcCCC
Q 006607          604 ALEGWD  609 (639)
Q Consensus       604 alEgw~  609 (639)
                      +|=-..
T Consensus       147 aL~PL~  152 (344)
T PLN02383        147 AVTPLH  152 (344)
T ss_pred             HHHHHH
Confidence            875553

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=80.10  E-value=7.9  Score=43.19  Aligned_cols=90  Identities=14%  Similarity=0.103  Sum_probs=59.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc-------------cceeeeccccccceeE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-------------HNLVLSTSYAAHKTKI  528 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-------------~~l~~~~~~~~~~~~v  528 (639)
                      .+|.++|..   .+|...|..|+++|.+|+.  +++++.+.+++.......             ..+...+..  +++++
T Consensus         4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~--~~aDv   78 (415)
T PRK11064          4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTP--EPADA   78 (415)
T ss_pred             cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeeccc--ccCCE
Confidence            579999985   9999999999999999998  889999988755221111             111111112  34544


Q ss_pred             --EEEcCcCCh-------------hh-hhcCCCCceeecccccCCc
Q 006607          529 --WLVGDDLTG-------------KE-QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       529 --wivg~~~~~-------------~~-q~~a~~G~~f~~~~~~~~~  558 (639)
                        .-|+...++             ++ ...+++|++++.-|-+||.
T Consensus        79 vii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pg  124 (415)
T PRK11064         79 FLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSPVG  124 (415)
T ss_pred             EEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence              336653211             11 2346899999999988886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	639
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 2e-06
 Identities = 79/577 (13%), Positives = 167/577 (28%), Gaps = 171/577 (29%)

Query: 151 HHHYLYSRYHSHHHSSVVTEPI----TSVIHPFAEHIVY-FLLFAIPLVTTMVLKNASIA 205
           HHH        HHH    T         ++  F +  V  F    +  +   +L    I 
Sbjct: 1   HHH--------HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID 52

Query: 206 SFVG---------YI----------IYVDFMNNMGHCNFEFIPMWLFTVF------PPLK 240
             +           +          +   F+  +   N++    +L +        P + 
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK----FLMSPIKTEQRQPSMM 108

Query: 241 FLMYTPSYHSLH----------------HTQFRTN-YSLFMPIYDYIYGTIDRSSDSVYE 283
             MY      L+                + + R     L       I G +  S  +   
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG-SGKTWVA 167

Query: 284 KSLKRSGEEEEESADDVDVVHLTHLTTPESI--------YHLRIGFASLASKPHRYTYTL 335
             +  S + + +    +  ++L +  +PE++        Y +   + S +         +
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 336 SQWYLQLLWPFTASCSVLVSWIYGRTF-----VSESNTLDKLKL--QTWVVPRYIVQYNL 388
                +L         +L S  Y         V  +   +   L  +  +  R+      
Sbjct: 228 HSIQAELR-------RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF------ 274

Query: 389 PWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEI---YLERQPNKLKIKVV 445
              ++  + L         A     ISL   +     +    +   YL+ +P  L  +V+
Sbjct: 275 ---KQVTDFL--------SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 446 DGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKL 505
             +    +++  S+    A       V  +K+   + SSL  +        +  +++L +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE---PAEYRKMFDRLSV 380

Query: 506 -----RIPVEAQHNLVLSTSYAAHKTKIW---------LVGDDLTGKE--QARAPKGTIF 549
                 IP       +LS         IW         +V + L      + +  + TI 
Sbjct: 381 FPPSAHIPTI-----LLSL--------IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Query: 550 IPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWD 609
           IP   +   +L+               +   +H       R ++  + I       + +D
Sbjct: 428 IPSIYL---ELKVKL-----------ENEYALH-------RSIVDHYNI------PKTFD 460

Query: 610 LNECGQTMCD----IHQVWH-ASLRHG-----FRPLF 636
            ++      D     H   H  ++ H      FR +F
Sbjct: 461 SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	639
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.12
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.94
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.8
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.68
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.57
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.54
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.52
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.5
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.5
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.49
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.44
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.37
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.33
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.31
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.29
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.28
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.25
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.25
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.24
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.21
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.21
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.21
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.17
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.14
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.13
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.12
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.11
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.11
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.1
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.1
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.08
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.07
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.06
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.06
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.05
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.04
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.04
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.04
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.02
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.02
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.01
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.99
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.99
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.97
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.97
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.97
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.97
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	95.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	95.94
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	95.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	95.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.93
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.92
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.92
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	95.92
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	95.92
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	95.92
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	95.91
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.91
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	95.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.88
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	95.88
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	95.88
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.87
1spx_A	278	Short-chain reductase family member (5L265); paral	95.86
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.85
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.85
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	95.84
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.83
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.83
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	95.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.82
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.82
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.81
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.8
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	95.8
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.79
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.79
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.79
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	95.78
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.78
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.77
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.76
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	95.75
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.75
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.75
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	95.74
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	95.72
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.7
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.7
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.7
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.67
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.67
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.67
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.66
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.66
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.66
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	95.65
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	95.65
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.64
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.64
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.63
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.62
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.61
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	95.59
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.58
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.57
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.56
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.56
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.56
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.52
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.52
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.52
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.52
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.51
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.5
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.49
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.48
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.44
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.44
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.43
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.43
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.43
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.42
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.42
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.42
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.41
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.41
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.41
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.39
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	95.38
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.35
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	95.33
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.31
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.3
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.3
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.29
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.29
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.27
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.26
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.26
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.26
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.26
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.26
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.25
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.23
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.2
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.2
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.18
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	95.14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	95.13
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.12
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.12
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.11
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.08
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.05
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.05
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.05
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	95.04
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.01
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	95.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	94.99
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	94.97
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	94.96
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	94.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	94.94
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.92
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.92
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	94.91
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.9
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	94.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	94.88
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	94.88
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	94.85
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.83
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	94.82
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.82
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	94.79
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.79
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	94.78
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.76
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	94.74
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	94.74
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.73
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	94.71
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	94.66
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.66
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	94.62
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	94.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	94.58
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.55
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	94.51
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	94.51
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.51
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.45
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	94.44
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	94.42
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.39
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	94.36
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	94.34
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	94.34
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	94.29
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	94.28
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.26
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.23
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	94.2
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	94.19
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	94.19
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	94.18
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	94.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.05
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.02
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	93.98
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	93.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	93.94
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	93.94
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	93.92
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	93.91
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	93.91
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	93.91
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	93.9
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	93.89
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	93.89
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	93.88
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	93.88
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	93.84
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.7
3l07_A	285	Bifunctional protein fold; structural genomics, ID	93.69
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	93.68
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	93.67
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.67
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	93.64
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	93.64
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	93.61
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	93.58
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	93.53
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	93.53
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	93.52
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.44
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	93.42
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	93.35
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	93.33
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	93.29
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	93.29
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	93.27
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	93.27
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	93.27
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	93.24
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	93.22
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	93.16
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	93.11
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	93.1
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	93.1
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	93.09
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	93.06
1xq6_A	253	Unknown protein; structural genomics, protein stru	93.04
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	93.04
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	92.99
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	92.98
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	92.96
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	92.95
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	92.9
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	92.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	92.86
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	92.85
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	92.84
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	92.82
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	92.82
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	92.78
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	92.74
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	92.66
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	92.65
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	92.59
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	92.58
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	92.56
4f6l_B	508	AUSA reductase domain protein; thioester reductase	92.55
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	92.51
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	92.48
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	92.45
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	92.42
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	92.41
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	92.4
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	92.38
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	92.38
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	92.36
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	92.34
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	92.34
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	92.32
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	92.3
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	92.25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	92.22
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	92.06
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	92.05
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	92.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	91.94
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	91.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	91.9
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	91.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	91.78
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	91.77
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	91.75
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	91.73
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	91.72
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	91.7
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	91.69
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	91.67
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	91.66
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	91.66
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	91.62
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	91.56
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	91.55
3qha_A	296	Putative oxidoreductase; seattle structural genomi	91.54
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	91.54
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	91.51
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	91.37
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	91.32
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	91.22
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	91.18
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	91.04
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	91.03
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	90.94
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	90.91
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	90.9
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	90.9
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	90.88
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	90.83
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	90.75
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	90.71
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	90.7
3tl2_A	315	Malate dehydrogenase; center for structural genomi	90.67
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	90.57
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	90.55
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	90.54
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	90.53
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	90.47
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	90.43
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	90.4
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	90.39
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	90.32
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	90.28
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	90.28
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	90.27
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	90.24
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	90.22
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	90.21
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	90.17
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	90.17
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	90.16
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	90.09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	90.09
4ezb_A	317	Uncharacterized conserved protein; structural geno	90.06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	90.02
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	89.76
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	89.75
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	89.66
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	89.66
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	89.63
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	89.61
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	89.59
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	89.58
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	89.55
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	89.55
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	89.44
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	89.37
4g65_A	461	TRK system potassium uptake protein TRKA; structur	89.34
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	89.3
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	89.21
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	89.09
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	89.08
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	89.01
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	88.96
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	88.87
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	88.83
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	88.66
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	88.65
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	88.65
4f2g_A	309	Otcase 1, ornithine carbamoyltransferase 1; struct	88.56
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	88.51
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	88.47
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	88.33
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	88.33
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	88.33
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	88.32
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	88.25
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	88.23
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	88.23
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	88.22
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	88.19
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	88.16
3c85_A	183	Putative glutathione-regulated potassium-efflux S	88.14
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	88.04
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	88.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	87.99
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	87.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	87.93
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	87.92
4eye_A	342	Probable oxidoreductase; structural genomics, niai	87.9
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	87.88
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	87.87
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	87.85
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	87.83
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	87.74
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	87.63
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	87.59
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	87.54
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	87.54
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	87.48
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	87.47
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	87.45
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	87.37
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	87.36
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	87.34
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	87.31
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	87.23
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	87.21
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	87.16
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	87.16
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	87.16
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	87.14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	87.12
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	87.12
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	86.98
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	86.97
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	86.93
2i6u_A	307	Otcase, ornithine carbamoyltransferase; X-RAY crys	86.9
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	86.82
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	86.79
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	86.73
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	86.71
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	86.68
4a8t_A	339	Putrescine carbamoyltransferase; trabnsferase PALO	86.66
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	86.65
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	86.6
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	86.56
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	86.28
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	86.25
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	86.09
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	86.02
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	86.02
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	86.01
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	85.97
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	85.92
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	85.91
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	85.85
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	85.78
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	85.72
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	85.69
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	85.66
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	85.66
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	85.65
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	85.43
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	85.41
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	85.35
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	85.34
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	85.33
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	85.31
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	85.31
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	85.17
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	85.16
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	85.14
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	85.12
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	85.1
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	85.08
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	85.06
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	85.05
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	84.97
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	84.94
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	84.88
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	84.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	84.83
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	84.69
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	84.53
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	84.5
1lnq_A	336	MTHK channels, potassium channel related protein;	84.5
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	84.49
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	84.48
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	84.48
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	84.44
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	84.43
4e4y_A	244	Short chain dehydrogenase family protein; structur	84.43
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	84.42
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	84.39
1oth_A	321	Protein (ornithine transcarbamoylase); transferase	84.35
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	84.35
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	84.29
1ml4_A	308	Aspartate transcarbamoylase; beta pleated sheet, p	84.27
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	84.27

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.12  E-value=0.00048  Score=62.74  Aligned_cols=88  Identities=19%  Similarity=0.234  Sum_probs=59.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL  535 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~  535 (639)
                      ..++|.++|+ |  .+|+++++.|.++|.+|.+  |++++.+++.++.+...    ....++++  ++++++|.  +..-
T Consensus        20 ~~~~v~iiG~-G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~Divi~at~~~~   92 (144)
T 3oj0_A           20 GGNKILLVGN-G--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY----VLINDIDSLIKNNDVIITATSSKT   92 (144)
T ss_dssp             CCCEEEEECC-S--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE----EECSCHHHHHHTCSEEEECSCCSS
T ss_pred             cCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce----EeecCHHHHhcCCCEEEEeCCCCC
Confidence            4779999997 7  9999999999999999777  89999998887754211    12234443  66777663  2211


Q ss_pred             ChhhhhcCCCCceeecccccCC
Q 006607          536 TGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       536 ~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ...+....++|.++++++ +|+
T Consensus        93 ~~~~~~~l~~g~~vid~~-~p~  113 (144)
T 3oj0_A           93 PIVEERSLMPGKLFIDLG-NPP  113 (144)
T ss_dssp             CSBCGGGCCTTCEEEECC-SSC
T ss_pred             cEeeHHHcCCCCEEEEcc-CCc
Confidence            111123457788888887 443

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.94  E-value=0.00086  Score=69.32  Aligned_cols=105  Identities=13%  Similarity=0.083  Sum_probs=66.0

Q ss_pred             ecCChhHHHHHHhc-CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeecc
Q 006607          445 VDGSSLAAAVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS  520 (639)
Q Consensus       445 v~Gnsltaa~v~~~-i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~  520 (639)
                      |||.....+..-.. +....++|+++|+ |  .+|+++|..|++.|. +|++  |+.++.++|.+++..... ..+...+
T Consensus       122 Td~~G~~~~l~~~~~~~l~~~~vlVlGa-G--g~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~~~~~~~  197 (297)
T 2egg_A          122 TDGLGYVQALEEEMNITLDGKRILVIGA-G--GGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-AYFSLAE  197 (297)
T ss_dssp             CHHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-CEECHHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCCEEEEECc-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-ceeeHHH
Confidence            45555544443333 4445678999998 6  799999999999998 8888  889999999988654221 1111123


Q ss_pred             cc-c-cceeEEE--EcCcCCh------hhhhcCCCCceeeccc
Q 006607          521 YA-A-HKTKIWL--VGDDLTG------KEQARAPKGTIFIPYT  553 (639)
Q Consensus       521 ~~-~-~~~~vwi--vg~~~~~------~~q~~a~~G~~f~~~~  553 (639)
                      ++ . .+++++|  ++....+      -+....++|++++|.+
T Consensus       198 ~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          198 AETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             HHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             HHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            33 2 5677777  2222211      1122346777777777

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.80  E-value=0.0012  Score=72.21  Aligned_cols=139  Identities=15%  Similarity=0.173  Sum_probs=94.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~  533 (639)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  ++..+.+..... +       ....++++  +.++|++.    ..
T Consensus       210 ~GktVgIiG~G---~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~-G-------~~~~sL~eal~~ADVVilt~gt~~  278 (436)
T 3h9u_A          210 AGKTACVCGYG---DVGKGCAAALRGFGARVVVTEVDPINALQAAME-G-------YQVLLVEDVVEEAHIFVTTTGNDD  278 (436)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T-------CEECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHh-C-------CeecCHHHHHhhCCEEEECCCCcC
Confidence            46789999954   9999999999999999998  444333222111 1       12335553  66777663    24


Q ss_pred             cCChhhhhcCCCCceeecccccCCc----CC----------CCCc---eeecCCccc-cC-CCCccccccccccCcchhh
Q 006607          534 DLTGKEQARAPKGTIFIPYTQIPPR----KL----------RKDC---FYHSTPAMI-IP-PSLSNMHSCENWLGRRVMS  594 (639)
Q Consensus       534 ~~~~~~q~~a~~G~~f~~~~~~~~~----~~----------R~dc---~y~~~~a~~-~P-~~~~~~~~~e~~~pr~~~~  594 (639)
                      .++.+....+++|+++|.+++.+++    .+          |..+   ..+++-.+. +. +.+-|+. |-.+.|..+|+
T Consensus       279 iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvNl~-~~~Ghp~~vm~  357 (436)
T 3h9u_A          279 IITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVNLG-CASGHPSFVMS  357 (436)
T ss_dssp             SBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHH-HSCCSCHHHHH
T ss_pred             ccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeeccc-CCCCChHHHhh
Confidence            6888999999999999999985542    22          2111   112222222 22 2366786 99999999999


Q ss_pred             hHHHHHHHHHhcCCCCCc
Q 006607          595 AWRIAGIIHALEGWDLNE  612 (639)
Q Consensus       595 Ac~a~~~v~alEgw~~~e  612 (639)
                      ..++.-.+-..|=|++++
T Consensus       358 ~sf~~q~la~~~l~~~~~  375 (436)
T 3h9u_A          358 NSFCNQVLAQIELWTNRD  375 (436)
T ss_dssp             HHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHhCCC
Confidence            999999888888776643

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.68  E-value=0.00042  Score=71.34  Aligned_cols=151  Identities=13%  Similarity=0.102  Sum_probs=87.3

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      |||-....+.--..+....++|+++|+ |  -+|+++|..|.+.|. +|++  |+.++.+++.+++...      ...++
T Consensus        99 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~------~~~~~  169 (277)
T 3don_A           99 TDGIGYVNGLKQIYEGIEDAYILILGA-G--GASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI------NLSHA  169 (277)
T ss_dssp             CHHHHHHHHHHHHSTTGGGCCEEEECC-S--HHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEE------CHHHH
T ss_pred             ChHHHHHHHHHHhCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccc------cHhhH
Confidence            566666555433334445678999998 5  789999999999998 8888  8888877665432110      11123


Q ss_pred             cc--cceeEEE----EcC--cCC-hhhhhcCCCCceeecccccCCc-----CCC-CCceeecCCccccCCCCcccccccc
Q 006607          522 AA--HKTKIWL----VGD--DLT-GKEQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMIIPPSLSNMHSCEN  586 (639)
Q Consensus       522 ~~--~~~~vwi----vg~--~~~-~~~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~P~~~~~~~~~e~  586 (639)
                      ++  ++++++|    +|-  ..+ +-+....++|++++|++-.|..     +.| +-|.+..+..|-+=   |+..++|.
T Consensus       170 ~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv~---Qa~~~f~l  246 (277)
T 3don_A          170 ESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYNGLDMFVH---QGAESFKI  246 (277)
T ss_dssp             HHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSCHHHHHHHHTTCCEECTHHHHHH---HHHHHHHH
T ss_pred             HHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCCHHHHHHHHCcCEEeCCHHHHHH---HHHHHHHH
Confidence            32  5667777    321  000 1123456889999998844433     122 56777777766542   33334556


Q ss_pred             ccCcchhhhHHHHHHHHHhcC
Q 006607          587 WLGRRVMSAWRIAGIIHALEG  607 (639)
Q Consensus       587 ~~pr~~~~Ac~a~~~v~alEg  607 (639)
                      |..++.=...+-+.+..++++
T Consensus       247 wtg~~~~~~~~~~~l~~~~~~  267 (277)
T 3don_A          247 WTNLEPDIKAMKNIVIQKLKG  267 (277)
T ss_dssp             HHSSCCCHHHHHHHHHHHHTT
T ss_pred             HcCCCCCHHHHHHHHHHHhhH
Confidence            654443333445555555443

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.57  E-value=0.0075  Score=66.79  Aligned_cols=139  Identities=16%  Similarity=0.159  Sum_probs=94.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--E--cC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--V--GD  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--v--g~  533 (639)
                      ..+.|+|+|+.   .||+++|+.|.+.|.+|.+  ++.++.++...+.        ..+++.++  +.+++++  .  -+
T Consensus       264 ~GKtVvVtGaG---gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g--------~dv~~lee~~~~aDvVi~atG~~~  332 (488)
T 3ond_A          264 AGKVAVVAGYG---DVGKGCAAALKQAGARVIVTEIDPICALQATMEG--------LQVLTLEDVVSEADIFVTTTGNKD  332 (488)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--------CEECCGGGTTTTCSEEEECSSCSC
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhC--------CccCCHHHHHHhcCEEEeCCCChh
Confidence            56789999975   8999999999999999998  6666666554431        12344443  5566655  2  36


Q ss_pred             cCChhhhhcCCCCceeecccccCCc-------CC--------CCCce---eec-CCccc--cCCCCccccccccccCcch
Q 006607          534 DLTGKEQARAPKGTIFIPYTQIPPR-------KL--------RKDCF---YHS-TPAMI--IPPSLSNMHSCENWLGRRV  592 (639)
Q Consensus       534 ~~~~~~q~~a~~G~~f~~~~~~~~~-------~~--------R~dc~---y~~-~~a~~--~P~~~~~~~~~e~~~pr~~  592 (639)
                      .++.+....+++|++++..+..+.+       ..        |..+.   +.. ..++.  -.+.+-|+. |-.+.|..+
T Consensus       333 vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLaeGRIVNls-S~~G~p~~v  411 (488)
T 3ond_A          333 IIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLG-CATGHPSFV  411 (488)
T ss_dssp             SBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEGGGSCHHHH-HSCCSCHHH
T ss_pred             hhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHcCCcEEEEe-cCcccCccc
Confidence            7888899999999999988863221       11        11111   111 22222  224566675 677999999


Q ss_pred             hhhHHHHHHHHHhcCCCCCc
Q 006607          593 MSAWRIAGIIHALEGWDLNE  612 (639)
Q Consensus       593 ~~Ac~a~~~v~alEgw~~~e  612 (639)
                      |+.-++.-.+-..|-|+..+
T Consensus       412 m~~sfa~Q~la~~~l~~~~~  431 (488)
T 3ond_A          412 MSCSFTNQVIAQLELWNEKS  431 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccHHHHHHHHHHHHhCCC
Confidence            99999888888888887654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.54  E-value=0.0015  Score=67.31  Aligned_cols=101  Identities=13%  Similarity=0.149  Sum_probs=66.9

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      |||-....+.--..+.-..++|+++|+ |  -+|+++|..|++.|. +|.+  |+.++.+++.+++....  . +...++
T Consensus       108 TD~~G~~~~L~~~~~~l~~k~vlvlGa-G--g~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~-~~~~~~  181 (281)
T 3o8q_A          108 TDGEGLVQDLLAQQVLLKGATILLIGA-G--GAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--E-VKAQAF  181 (281)
T ss_dssp             CHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--C-EEEEEG
T ss_pred             cHHHHHHHHHHHhCCCccCCEEEEECc-h--HHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--C-eeEeeH
Confidence            666665555422234446789999998 5  799999999999996 8888  99999999988865422  1 223344


Q ss_pred             cc--cceeEEE----EcC-----cCChhhhhcCCCCceeecccc
Q 006607          522 AA--HKTKIWL----VGD-----DLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       522 ~~--~~~~vwi----vg~-----~~~~~~q~~a~~G~~f~~~~~  554 (639)
                      ++  ++++++|    +|-     .++   ....++|++++|.+=
T Consensus       182 ~~l~~~aDiIInaTp~gm~~~~~~l~---~~~l~~~~~V~DlvY  222 (281)
T 3o8q_A          182 EQLKQSYDVIINSTSASLDGELPAID---PVIFSSRSVCYDMMY  222 (281)
T ss_dssp             GGCCSCEEEEEECSCCCC----CSCC---GGGEEEEEEEEESCC
T ss_pred             HHhcCCCCEEEEcCcCCCCCCCCCCC---HHHhCcCCEEEEecC
Confidence            43  5678877    231     122   123467777777763

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.52  E-value=0.0023  Score=65.42  Aligned_cols=101  Identities=12%  Similarity=0.094  Sum_probs=63.3

Q ss_pred             ChhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc--cc-ceee
Q 006607          448 SSLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--QH-NLVL  517 (639)
Q Consensus       448 nsltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~--~~-~l~~  517 (639)
                      || +.+.+.+.+.     -..+.|+++|+.   -+|+++|+.|++.| +|++  |+.++.+++++++....  .. .-+.
T Consensus       109 nT-d~~G~~~~L~~~~~~l~~k~vlV~GaG---giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d  183 (287)
T 1nvt_A          109 NT-DGIGARMALEEEIGRVKDKNIVIYGAG---GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVK  183 (287)
T ss_dssp             CC-HHHHHHHHHHHHHCCCCSCEEEEECCS---HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEE
T ss_pred             cC-CHHHHHHHHHHhCCCcCCCEEEEECch---HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEE
Confidence            44 4555555543     245789999985   79999999999999 9998  88899999887754321  00 0022


Q ss_pred             ecccc-c-cceeEEE--EcCcCCh------h-hhhcCCCCceeeccc
Q 006607          518 STSYA-A-HKTKIWL--VGDDLTG------K-EQARAPKGTIFIPYT  553 (639)
Q Consensus       518 ~~~~~-~-~~~~vwi--vg~~~~~------~-~q~~a~~G~~f~~~~  553 (639)
                      +++++ . ..++++|  +|....+      - +....++|++++|++
T Consensus       184 ~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          184 FSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             EECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             EeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            33433 3 6677877  3322211      1 223456677777776

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.50  E-value=0.0027  Score=61.74  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=39.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus         3 k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   48 (235)
T 3l77_A            3 KVAVITGASR--GIGEAIARALARDGYALALGARSVDRLEKIAHELMQ   48 (235)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            5789999998  9999999999999999998  999999988877643

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.50  E-value=0.0082  Score=60.83  Aligned_cols=48  Identities=17%  Similarity=0.148  Sum_probs=40.9

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ++-..++|+++|+ |  -+|+++|+.|++.|.+|++  |+.++.+++++++..
T Consensus       115 ~~l~~k~vlViGa-G--g~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~  164 (271)
T 1nyt_A          115 FIRPGLRILLIGA-G--GASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH  164 (271)
T ss_dssp             CCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             cCcCCCEEEEECC-c--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc
Confidence            3334678999998 6  7999999999999999988  899999999888654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.49  E-value=0.002  Score=66.03  Aligned_cols=101  Identities=15%  Similarity=0.128  Sum_probs=63.7

Q ss_pred             ecCChhHHHHHHhc--CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeec
Q 006607          445 VDGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLST  519 (639)
Q Consensus       445 v~Gnsltaa~v~~~--i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~  519 (639)
                      |||-....+ +++.  +....++|+++|+ |  -+|+++|..|++.|. +|++  |+.++.++|.+++.. .  . +...
T Consensus       101 TD~~G~~~~-lL~~~~~~l~~k~~lvlGa-G--g~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~-~~~~  172 (272)
T 3pwz_A          101 FDGIGLLRD-IEENLGEPLRNRRVLLLGA-G--GAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--R-LRIS  172 (272)
T ss_dssp             CHHHHHHHH-HHTTSCCCCTTSEEEEECC-S--HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--T-EEEE
T ss_pred             CCHHHHHHH-HHHHcCCCccCCEEEEECc-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--C-eeEe
Confidence            555555544 1232  3345679999998 5  789999999999996 8888  999999999988654 1  1 2222


Q ss_pred             cccc---cceeEEE----EcCc--CChhhhhcCCCCceeeccc
Q 006607          520 SYAA---HKTKIWL----VGDD--LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       520 ~~~~---~~~~vwi----vg~~--~~~~~q~~a~~G~~f~~~~  553 (639)
                      ++++   ++++++|    +|-.  ..+-+....++|++++|.+
T Consensus       173 ~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          173 RYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             CSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred             eHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence            3332   4567777    2210  0111122346777777776

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.44  E-value=0.0048  Score=67.69  Aligned_cols=169  Identities=16%  Similarity=0.087  Sum_probs=108.1

Q ss_pred             eeeecCChhHHHHHHhc--CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeec
Q 006607          442 IKVVDGSSLAAAVVVNS--LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLST  519 (639)
Q Consensus       442 irvv~Gnsltaa~v~~~--i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~  519 (639)
                      -+.=+|.|+..++ .+.  +.-..++|.|+|.-   .||+++|+.|...|.+|+..+.+....++.. ..+     +.+.
T Consensus       225 n~yG~~eslvdgI-~Ratg~~L~GKTVgVIG~G---~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G-----~~vv  294 (464)
T 3n58_A          225 NKYGCKESLVDGI-RRGTDVMMAGKVAVVCGYG---DVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDG-----FEVV  294 (464)
T ss_dssp             HHHHHHHHHHHHH-HHHHCCCCTTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTT-----CEEC
T ss_pred             hhhcchHHHHHHH-HHhcCCcccCCEEEEECcC---HHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcC-----ceec
Confidence            3444555655444 333  34467899999964   9999999999999999999333333333222 111     1123


Q ss_pred             cccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc----CCCCCcee--ecCCc--cccCC---------
Q 006607          520 SYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFY--HSTPA--MIIPP---------  576 (639)
Q Consensus       520 ~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y--~~~~a--~~~P~---------  576 (639)
                      ++++  +.+++++  .|  ..|+.++...|++|+++|-+++++.+    .+++ +.-  ++-.+  ..+|+         
T Consensus       295 ~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~-~~~~~ik~~v~~~~~~~g~~i~lLae  373 (464)
T 3n58_A          295 TLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN-LKWTNVKPQVDLIEFPDGKRLILLSE  373 (464)
T ss_dssp             CHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT-SEEEEEETTEEEEECTTSCEEEEEGG
T ss_pred             cHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh-CccccccCCeeEEEeCCCCEEEEEeC
Confidence            4443  5666655  33  46789999999999999999986652    3332 210  00000  12332         


Q ss_pred             -CCccccccccccCcchhhhHHHHHHHHHhcCCCCCc-cch-h---hhhHHH
Q 006607          577 -SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNE-CGQ-T---MCDIHQ  622 (639)
Q Consensus       577 -~~~~~~~~e~~~pr~~~~Ac~a~~~v~alEgw~~~e-~G~-i---v~~i~~  622 (639)
                       .+-|+. |-.+.|..+|+..++--.+-..|=|++++ ... +   .+++|+
T Consensus       374 GrlvNL~-~a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v~~lP~~lDe  424 (464)
T 3n58_A          374 GRLLNLG-NATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKHLDE  424 (464)
T ss_dssp             GSBHHHH-HSCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSEECCCHHHHH
T ss_pred             Cceeccc-CCCCChHHHHhHHHHHHHHHHHHHHhCccccCCCeeECCHHHHH
Confidence             366786 99999999999999999888888887763 332 2   366664

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.37  E-value=0.0035  Score=65.63  Aligned_cols=126  Identities=14%  Similarity=0.113  Sum_probs=78.2

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCCcccccceeee
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNLVLS  518 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~---~~~~~~l~~~~~~~~~~~l~~~  518 (639)
                      |||-....+.--..+.-..++|+|+|+ |  -+|+|+|..|++.|. +|++  |+   .++.+++.+++....... +.+
T Consensus       136 TD~~Gf~~~L~~~~~~l~gk~~lVlGa-G--G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~-~~~  211 (315)
T 3tnl_A          136 TDGTGYMRALKEAGHDIIGKKMTICGA-G--GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCK-AQL  211 (315)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEE
T ss_pred             CCHHHHHHHHHHcCCCccCCEEEEECC-C--hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCc-eEE
Confidence            555555444322344446789999998 5  789999999999998 8888  88   888888888765533222 112


Q ss_pred             cc------ccc--cceeEEE----EcCc----CChh-hhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607          519 TS------YAA--HKTKIWL----VGDD----LTGK-EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       519 ~~------~~~--~~~~vwi----vg~~----~~~~-~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  574 (639)
                      .+      +++  ++++++|    +|-.    -.|- +....+++.+++|+.=-|.+     +.| +-|.+..+..|-+
T Consensus       212 ~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~Gl~MLv  290 (315)
T 3tnl_A          212 FDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMML  290 (315)
T ss_dssp             EETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             eccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEeCcHHHHH
Confidence            12      222  4678887    3311    0111 33356788888888843332     222 5677777766654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.33  E-value=0.0051  Score=60.45  Aligned_cols=45  Identities=20%  Similarity=0.240  Sum_probs=40.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         8 ~~k~vlITGas~--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (253)
T 3qiv_A            8 ENKVGIVTGSGG--GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV   54 (253)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  99999998888754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.31  E-value=0.0045  Score=61.52  Aligned_cols=46  Identities=17%  Similarity=0.197  Sum_probs=40.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         6 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (252)
T 3h7a_A            6 RNATVAVIGAGD--YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA   53 (252)
T ss_dssp             CSCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            346799999998  9999999999999999999  999999998887644

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.29  E-value=0.0041  Score=61.76  Aligned_cols=46  Identities=11%  Similarity=0.119  Sum_probs=39.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++| +-||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus        21 ~~k~vlITGasg-~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~   68 (266)
T 3o38_A           21 KGKVVLVTAAAG-TGIGSTTARRALLEGADVVISDYHERRLGETRDQLA   68 (266)
T ss_dssp             TTCEEEESSCSS-SSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC-CchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH
Confidence            356899999986 35999999999999999998  89999988887763

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.28  E-value=0.0043  Score=60.32  Aligned_cols=44  Identities=7%  Similarity=0.083  Sum_probs=39.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   47 (230)
T 3guy_A            2 SLIVITGASS--GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN   47 (230)
T ss_dssp             -CEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSS
T ss_pred             CEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            4689999998  9999999999999999999  999999999888743

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.25  E-value=0.0053  Score=59.90  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=37.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus         3 k~vlItGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   46 (250)
T 2cfc_A            3 RVAIVTGASS--GNGLAIATRFLARGDRVAALDLSAETLEETARTH   46 (250)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            5799999998  9999999999999999988  8888888887765

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.25  E-value=0.0057  Score=61.78  Aligned_cols=50  Identities=20%  Similarity=0.235  Sum_probs=42.7

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ...-..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        27 ~~~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   78 (276)
T 3r1i_A           27 LFDLSGKRALITGAST--GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG   78 (276)
T ss_dssp             GGCCTTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            3344567899999998  9999999999999999998  999999988887543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.24  E-value=0.0056  Score=60.20  Aligned_cols=43  Identities=16%  Similarity=0.295  Sum_probs=39.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++
T Consensus         4 k~vlVTGas~--GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (235)
T 3l6e_A            4 GHIIVTGAGS--GLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG   48 (235)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            5799999998  9999999999999999998  99999999888864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.21  E-value=0.0056  Score=60.82  Aligned_cols=45  Identities=22%  Similarity=0.372  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         6 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   52 (257)
T 3imf_A            6 EKVVIITGGSS--GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ   52 (257)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999998  999999998887543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.21  E-value=0.0059  Score=59.88  Aligned_cols=46  Identities=22%  Similarity=0.296  Sum_probs=41.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        13 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (249)
T 3f9i_A           13 TGKTSLITGASS--GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD   60 (249)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc
Confidence            577899999998  9999999999999999999  999999999887654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.21  E-value=0.006  Score=61.14  Aligned_cols=46  Identities=15%  Similarity=0.196  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.++++++++.
T Consensus        29 ~~k~vlVTGas~--GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~   76 (281)
T 3ppi_A           29 EGASAIVSGGAG--GLGEATVRRLHADGLGVVIADLAAEKGKALADELGN   76 (281)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC
Confidence            456899999998  9999999999999999999  999999999888643

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.17  E-value=0.0054  Score=60.88  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         6 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (250)
T 3nyw_A            6 QKGLAIITGASQ--GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMR   53 (250)
T ss_dssp             CCCEEEEESTTS--HHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  999999988877543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.14  E-value=0.0063  Score=59.42  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=39.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        10 ~~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   56 (255)
T 1fmc_A           10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQ   56 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  88888887776643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.13  E-value=0.0074  Score=60.04  Aligned_cols=45  Identities=11%  Similarity=0.158  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++
T Consensus         7 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   53 (255)
T 4eso_A            7 QGKKAIVIGGTH--GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG   53 (255)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            346799999998  9999999999999999999  99999999988764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.12  E-value=0.0058  Score=61.14  Aligned_cols=48  Identities=19%  Similarity=0.206  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|.++|+||.|++=||+|+|+.|+++|.+|.+  |+++..+++++++.+
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~   54 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ   54 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            457789999986335999999999999999999  888888888777544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.11  E-value=0.0064  Score=60.49  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus        29 ~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (262)
T 3rkr_A           29 GQVAVVTGASR--GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV   74 (262)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  99999998887753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.11  E-value=0.0048  Score=62.51  Aligned_cols=42  Identities=29%  Similarity=0.306  Sum_probs=36.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+++.
T Consensus        11 ~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~   54 (342)
T 1y1p_A           11 GSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKR   54 (342)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHH
Confidence            45799999999  9999999999999999987  887777766554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.10  E-value=0.0066  Score=60.57  Aligned_cols=46  Identities=13%  Similarity=0.203  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (264)
T 3ucx_A           10 TDKVVVISGVGP--ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD   57 (264)
T ss_dssp             TTCEEEEESCCT--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999997  9999999999999999999  999999988887543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.10  E-value=0.0077  Score=59.46  Aligned_cols=46  Identities=20%  Similarity=0.177  Sum_probs=41.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++.
T Consensus         8 ~~k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (261)
T 3n74_A            8 EGKVALITGAGS--GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD   55 (261)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            456899999998  9999999999999999999  999999999887643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.08  E-value=0.006  Score=61.45  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=40.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   50 (264)
T 3tfo_A            4 DKVILITGASG--GIGEGIARELGVAGAKILLGARRQARIEAIATEIRD   50 (264)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            36799999998  9999999999999999999  999999988887643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.07  E-value=0.0049  Score=61.68  Aligned_cols=46  Identities=9%  Similarity=0.207  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus        19 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   66 (266)
T 4egf_A           19 DGKRALITGATK--GIGADIARAFAAAGARLVLSGRDVSELDAARRALGE   66 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            356899999998  9999999999999999999  899999888777644

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.06  E-value=0.0067  Score=59.89  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         7 ~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (247)
T 2jah_A            7 GKVALITGASS--GIGEATARALAAEGAAVAIAARRVEKLRALGDELT   52 (247)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.06  E-value=0.0097  Score=58.16  Aligned_cols=44  Identities=7%  Similarity=0.138  Sum_probs=39.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus        10 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   55 (254)
T 2wsb_A           10 DGACAAVTGAGS--GIGLEICRAFAASGARLILIDREAAALDRAAQEL   55 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  8888888887765

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.05  E-value=0.038  Score=57.14  Aligned_cols=140  Identities=14%  Similarity=0.128  Sum_probs=86.3

Q ss_pred             cCCcEEEeccccccc-ccccCCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEecccCchhhH
Q 006607          409 KGVKVISLGLLNQGE-ELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVA  478 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e-~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------~v~~~-i~~~~~~V~~~Gatg~~kig  478 (639)
                      .|+|+++.=-=|... .+-.-.+..+--+++ +.-..+.||+.+|+.       +..+. -+++.++|.++|+ |  .+|
T Consensus        71 ~g~K~~~~~p~N~~~~glp~~~~~~~l~d~~tG~p~a~~d~~~lt~~rT~a~~~la~~~la~~~~~~igiIG~-G--~~g  147 (312)
T 2i99_A           71 LTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGA-G--VQA  147 (312)
T ss_dssp             EEEEEEEEECCCSSSSCSSSEEEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHH
T ss_pred             EEEEEEEecCCCccccCCCceEEEEEEEECCCCCEEEEEcchhHHHHHHHHHHHHHHHHhCCCCCcEEEEECC-c--HHH
Confidence            477776642212111 111112233334443 355889999998752       22222 2456779999997 4  999


Q ss_pred             HHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-----cCcCChhhhhcCCCCc
Q 006607          479 NAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-----GDDLTGKEQARAPKGT  547 (639)
Q Consensus       479 ~ava~~L~~~-~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-----g~~~~~~~q~~a~~G~  547 (639)
                      +++++.|++. |. +|.+  |++++.+++.+++..    +.....++++  +++++++.     ...++.   .++++|+
T Consensus       148 ~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~----~~~~~~~~~e~v~~aDiVi~atp~~~~v~~~---~~l~~g~  220 (312)
T 2i99_A          148 YSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG----EVRVCSSVQEAVAGADVIITVTLATEPILFG---EWVKPGA  220 (312)
T ss_dssp             HHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSS----CCEECSSHHHHHTTCSEEEECCCCSSCCBCG---GGSCTTC
T ss_pred             HHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhC----CeEEeCCHHHHHhcCCEEEEEeCCCCcccCH---HHcCCCc
Confidence            9999999864 76 7777  899999999887653    1112335553  67777652     222322   3678999


Q ss_pred             eeecccccCCc
Q 006607          548 IFIPYTQIPPR  558 (639)
Q Consensus       548 ~f~~~~~~~~~  558 (639)
                      ++++++-..|.
T Consensus       221 ~vi~~g~~~p~  231 (312)
T 2i99_A          221 HINAVGASRPD  231 (312)
T ss_dssp             EEEECCCCSTT
T ss_pred             EEEeCCCCCCC
Confidence            99998766554

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.04  E-value=0.0065  Score=59.06  Aligned_cols=44  Identities=18%  Similarity=0.256  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (248)
T 2pnf_A            7 GKVSLVTGSTR--GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA   52 (248)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888776653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.04  E-value=0.01  Score=59.44  Aligned_cols=44  Identities=9%  Similarity=0.145  Sum_probs=39.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus         6 ~k~vlITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (263)
T 2a4k_A            6 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALE   51 (263)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  89999998888765

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.04  E-value=0.0086  Score=59.44  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   54 (259)
T 4e6p_A            8 GKSALITGSAR--GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP   54 (259)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence            46799999998  9999999999999999998  899999988887643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.02  E-value=0.012  Score=59.66  Aligned_cols=87  Identities=20%  Similarity=0.185  Sum_probs=56.9

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc--
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG--  532 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg--  532 (639)
                      ++...++|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.+++.++.+.+.      ..++++  ++++++|.-  
T Consensus       125 ~~~~~~~v~iiGa-G--~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~------~~~~~~~~~~aDiVi~atp  195 (275)
T 2hk9_A          125 PEVKEKSILVLGA-G--GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV------VNSPEEVIDKVQVIVNTTS  195 (275)
T ss_dssp             TTGGGSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE------CSCGGGTGGGCSEEEECSS
T ss_pred             CCcCCCEEEEECc-h--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee------ehhHHhhhcCCCEEEEeCC
Confidence            4434578999997 6  8999999999999998888  88888888877653211      114443  667776631  


Q ss_pred             CcCCh-----hhhhcCCCCceeecccc
Q 006607          533 DDLTG-----KEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       533 ~~~~~-----~~q~~a~~G~~f~~~~~  554 (639)
                      ....+     -+...+++|++++|++-
T Consensus       196 ~~~~~~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          196 VGLKDEDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            11111     11234567777777663

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.02  E-value=0.009  Score=60.52  Aligned_cols=46  Identities=20%  Similarity=0.270  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   74 (283)
T 3v8b_A           27 PSPVALITGAGS--GIGRATALALAADGVTVGALGRTRTEVEEVADEIVG   74 (283)
T ss_dssp             CCCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356799999998  9999999999999999998  999999999888643

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.01  E-value=0.0075  Score=61.66  Aligned_cols=46  Identities=15%  Similarity=0.299  Sum_probs=41.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus        40 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~   87 (293)
T 3rih_A           40 SARSVLVTGGTK--GIGRGIATVFARAGANVAVAARSPRELSSVTAELGE   87 (293)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  999999988887654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.00  E-value=0.0074  Score=59.10  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~   50 (247)
T 3lyl_A            5 EKVALVTGASR--GIGFEVAHALASKGATVVGTATSQASAEKFENSMK   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.99  E-value=0.0091  Score=61.22  Aligned_cols=48  Identities=19%  Similarity=0.169  Sum_probs=42.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      +-+.++++|+++  =||+|+|+.|+++|.+|.+  |++|+++++.++++.+.
T Consensus        28 ~gKvalVTGas~--GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~   77 (273)
T 4fgs_A           28 NAKIAVITGATS--GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA   77 (273)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTC
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCe
Confidence            456789999996  8999999999999999999  99999999988875543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.99  E-value=0.007  Score=60.66  Aligned_cols=44  Identities=14%  Similarity=0.199  Sum_probs=38.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus        20 ~~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   65 (267)
T 1vl8_A           20 RGRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL   65 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  8888888877665

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.97  E-value=0.0073  Score=62.16  Aligned_cols=126  Identities=17%  Similarity=0.086  Sum_probs=74.5

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccc-cceeeec-
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQ-HNLVLST-  519 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~-~~l~~~~-  519 (639)
                      |||-....+.--.......++|+++|+ |  -+|+++|.+|++.|. +|++  |+.++.+++.+++..... ....... 
T Consensus       109 TD~~G~~~~l~~~~~~l~~k~vlVlGa-G--G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~  185 (283)
T 3jyo_A          109 TDVSGFGRGMEEGLPNAKLDSVVQVGA-G--GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA  185 (283)
T ss_dssp             HHHHHHHHHHHHHCTTCCCSEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred             CCHHHHHHHHHHhCcCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH
Confidence            566555555432333445679999999 5  789999999999998 6888  999999999888654321 1111111 


Q ss_pred             -cccc--cceeEEEEcCcC--C-----hhhhhcCCCCceeecccccCCc------CCC-CCceeecCCcccc
Q 006607          520 -SYAA--HKTKIWLVGDDL--T-----GKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       520 -~~~~--~~~~vwivg~~~--~-----~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~  574 (639)
                       ++++  ++++++|--..+  .     +-+....+++++++|.. -.|.      +.| +-|.+..+..|-+
T Consensus       186 ~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~~~Gl~MLv  256 (283)
T 3jyo_A          186 RGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV-YMPIETELLKAARALGCETLDGTRMAI  256 (283)
T ss_dssp             TTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECC-CSSSSCHHHHHHHHHTCCEECTHHHHH
T ss_pred             HHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEec-CCCCCCHHHHHHHHCcCeEeCcHHHHH
Confidence             2332  567887721111  1     11223456777777776 3332      112 4455555555543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.97  E-value=0.0084  Score=58.83  Aligned_cols=44  Identities=14%  Similarity=0.197  Sum_probs=38.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        12 ~~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l   57 (260)
T 3awd_A           12 DNRVAIVTGGAQ--NIGLACVTALAEAGARVIIADLDEAMATKAVEDL   57 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  8888887776654

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.97  E-value=0.013  Score=63.85  Aligned_cols=149  Identities=15%  Similarity=0.120  Sum_probs=96.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--c--C
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--G--D  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g--~  533 (639)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  +++.+.+  +.. ..+     ..+.++++  +.+++++.  |  .
T Consensus       219 ~GktV~ViG~G---~IGk~vA~~Lra~Ga~Viv~D~dp~ra~--~A~-~~G-----~~v~~Leeal~~ADIVi~atgt~~  287 (435)
T 3gvp_A          219 GGKQVVVCGYG---EVGKGCCAALKAMGSIVYVTEIDPICAL--QAC-MDG-----FRLVKLNEVIRQVDIVITCTGNKN  287 (435)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHH--HHH-HTT-----CEECCHHHHTTTCSEEEECSSCSC
T ss_pred             cCCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEeCChhhhH--HHH-HcC-----CEeccHHHHHhcCCEEEECCCCcc
Confidence            56799999986   9999999999999999998  4443332  221 111     11334543  56666553  2  4


Q ss_pred             cCChhhhhcCCCCceeecccccCCc----CCCC-Cce----------e--ecCCccc-cCC-CCccccccccccCcchhh
Q 006607          534 DLTGKEQARAPKGTIFIPYTQIPPR----KLRK-DCF----------Y--HSTPAMI-IPP-SLSNMHSCENWLGRRVMS  594 (639)
Q Consensus       534 ~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~-dc~----------y--~~~~a~~-~P~-~~~~~~~~e~~~pr~~~~  594 (639)
                      .|+.+....+++|+++|.+++.+++    .++. ...          |  +.+-.+. +.+ .+-|+. |- +.|..+|+
T Consensus       288 lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~-~~-~hp~~vm~  365 (435)
T 3gvp_A          288 VVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLS-CS-TVPTFVLS  365 (435)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHH-HC-CCCHHHHH
T ss_pred             cCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCeeeEEcCCCcEEEEecCCCEeeec-CC-CCcHHHHh
Confidence            5888999999999999999985542    2321 111          1  1111211 222 355677 66 59999999


Q ss_pred             hHHHHHHHHHhcCCCCC--ccch-h---hhhHHHH
Q 006607          595 AWRIAGIIHALEGWDLN--ECGQ-T---MCDIHQV  623 (639)
Q Consensus       595 Ac~a~~~v~alEgw~~~--e~G~-i---v~~i~~i  623 (639)
                      -.++--.+-..|=|+++  +... +   .+++|+-
T Consensus       366 ~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~  400 (435)
T 3gvp_A          366 ITATTQALALIELYNAPEGRYKQDVYLLPKKMDEY  400 (435)
T ss_dssp             HHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHH
Confidence            99999888888888763  3333 2   3677653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.97  E-value=0.012  Score=58.71  Aligned_cols=45  Identities=13%  Similarity=0.197  Sum_probs=39.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   53 (260)
T 1nff_A            7 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD   53 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc
Confidence            46799999998  9999999999999999998  888888888777643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.96  E-value=0.0079  Score=60.70  Aligned_cols=45  Identities=24%  Similarity=0.226  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   73 (272)
T 4dyv_A           27 GKKIAIVTGAGS--GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG   73 (272)
T ss_dssp             -CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC
Confidence            456789999998  9999999999999999998  99999999888764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=95.95  E-value=0.007  Score=60.01  Aligned_cols=44  Identities=11%  Similarity=0.196  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (263)
T 3ai3_A            7 GKVAVITGSSS--GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK   52 (263)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888777653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=95.94  E-value=0.012  Score=58.18  Aligned_cols=43  Identities=12%  Similarity=0.210  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (254)
T 1hdc_A            5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATAREL   49 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            46799999998  9999999999999999988  8889999888877

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=95.94  E-value=0.012  Score=59.43  Aligned_cols=46  Identities=15%  Similarity=0.140  Sum_probs=41.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++.
T Consensus        15 ~gk~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~   62 (291)
T 3rd5_A           15 AQRTVVITGANS--GLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG   62 (291)
T ss_dssp             TTCEEEEECCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSS
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC
Confidence            457899999998  9999999999999999999  999999999888743

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=95.93  E-value=0.011  Score=59.69  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..-..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus        23 ~~l~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   72 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGS--GIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG   72 (277)
T ss_dssp             CTTTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            334567899999998  9999999999999999999  89999998888753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.93  E-value=0.0076  Score=60.14  Aligned_cols=46  Identities=15%  Similarity=0.257  Sum_probs=40.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         9 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (262)
T 3pk0_A            9 QGRSVVVTGGTK--GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ   56 (262)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            457899999998  9999999999999999998  999998888777543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.92  E-value=0.0044  Score=63.61  Aligned_cols=101  Identities=13%  Similarity=0.102  Sum_probs=66.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEE----EcC-
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VGD-  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwi----vg~-  533 (639)
                      +.++|+++|+ |  -.|+|+|..|.+.|.+|++  |+.++.++|. +++.       ...++++ .+++++|    +|. 
T Consensus       117 ~~k~vlvlGa-G--Gaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~-------~~~~~~~l~~~DiVInaTp~Gm~  185 (269)
T 3phh_A          117 NYQNALILGA-G--GSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGC-------DCFMEPPKSAFDLIINATSASLH  185 (269)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTC-------EEESSCCSSCCSEEEECCTTCCC
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC-------eEecHHHhccCCEEEEcccCCCC
Confidence            3789999998 5  7899999999999988888  9999999988 5431       1223333 4567777    331 


Q ss_pred             ---cCChhhhh-cCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607          534 ---DLTGKEQA-RAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       534 ---~~~~~~q~-~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  574 (639)
                         .++++... .+++|++++|.+--| .     +.| +-|.+..+..|-+
T Consensus       186 ~~~~l~~~~l~~~l~~~~~v~D~vY~P-~T~ll~~A~~~G~~~~~Gl~MLv  235 (269)
T 3phh_A          186 NELPLNKEVLKGYFKEGKLAYDLAYGF-LTPFLSLAKELKTPFQDGKDMLI  235 (269)
T ss_dssp             CSCSSCHHHHHHHHHHCSEEEESCCSS-CCHHHHHHHHTTCCEECSHHHHH
T ss_pred             CCCCCChHHHHhhCCCCCEEEEeCCCC-chHHHHHHHHCcCEEECCHHHHH
Confidence               24333111 347888889988554 3     112 5566666666643

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.92  E-value=0.0092  Score=60.56  Aligned_cols=62  Identities=19%  Similarity=0.197  Sum_probs=45.4

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      |||.....+.--..+....++|+++|+ |  -+|+++|..|++.|.+|++  |+.++.++++++++.
T Consensus       101 TD~~G~~~~L~~~~~~~~~~~vlvlGa-G--g~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~  164 (272)
T 1p77_A          101 TDGIGLVTDLQRLNWLRPNQHVLILGA-G--GATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP  164 (272)
T ss_dssp             CHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHHhCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc
Confidence            344444433322223335678999998 6  7999999999999999998  899999999877543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=95.92  E-value=0.012  Score=59.36  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=39.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.++.+
T Consensus         5 gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   50 (281)
T 3zv4_A            5 GEVALITGGAS--GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG   50 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC
Confidence            46799999998  9999999999999999999  99999998887764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=95.92  E-value=0.011  Score=59.37  Aligned_cols=45  Identities=18%  Similarity=0.202  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   56 (281)
T 3svt_A           10 QDRTYLVTGGGS--GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELE   56 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88888888877754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=95.92  E-value=0.0086  Score=61.15  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++..
T Consensus        30 ~gk~vlVTGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   77 (301)
T 3tjr_A           30 DGRAAVVTGGAS--GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG   77 (301)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999998  999999988877543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.92  E-value=0.0083  Score=59.41  Aligned_cols=43  Identities=16%  Similarity=0.240  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        14 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   58 (260)
T 2zat_A           14 NKVALVTASTD--GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATL   58 (260)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  8888888776664

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=95.91  E-value=0.0085  Score=57.53  Aligned_cols=39  Identities=8%  Similarity=0.090  Sum_probs=34.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchh-hHHHHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKD-DYEKLK  504 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~~-~~~~l~  504 (639)
                      +.|+++||+|  .||+++|+.|. ++|.+|.+  |+++ +.++++
T Consensus         6 k~vlVtGasg--~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~   48 (221)
T 3r6d_A            6 XYITILGAAG--QIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI   48 (221)
T ss_dssp             SEEEEESTTS--HHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH
T ss_pred             EEEEEEeCCc--HHHHHHHHHHHhcCCceEEEEecCccccchhhc
Confidence            4699999999  99999999999 89999988  8888 777765

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.91  E-value=0.0089  Score=63.83  Aligned_cols=147  Identities=19%  Similarity=0.231  Sum_probs=83.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE---EcCcCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  536 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~  536 (639)
                      ..++|.+.|. |  .||+.+|+.|.+.|.+|++  ++.++.++++++...+.    +....+-+.+|+|.+   .+..|+
T Consensus       172 ~GktV~V~G~-G--~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~----v~~~~ll~~~~DIvip~a~~~~I~  244 (364)
T 1leh_A          172 EGLAVSVQGL-G--NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA----VAPNAIYGVTCDIFAPCALGAVLN  244 (364)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE----CCGGGTTTCCCSEEEECSCSCCBS
T ss_pred             CcCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE----EChHHHhccCCcEeeccchHHHhC
Confidence            4578999998 5  9999999999999999999  77888888877643211    100011114677766   355566


Q ss_pred             hhhhhcCCCCceeecccccCCcCC-CCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH-Hhc--CCCCCc
Q 006607          537 GKEQARAPKGTIFIPYTQIPPRKL-RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-ALE--GWDLNE  612 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~~~-R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~-alE--gw~~~e  612 (639)
                      .++...+ +..+++--+. .|... .-+=...+.+..-+|+                 .++-|+|++- ++|  +|++.|
T Consensus       245 ~~~~~~l-g~~iV~e~An-~p~t~~ea~~~L~~~Gi~~~Pd-----------------~~~NaGGv~~s~~E~~~~~~e~  305 (364)
T 1leh_A          245 DFTIPQL-KAKVIAGSAD-NQLKDPRHGKYLHELGIVYAPD-----------------YVINAGGVINVADELYGYNRTR  305 (364)
T ss_dssp             TTHHHHC-CCSEECCSCS-CCBSSHHHHHHHHHHTCEECCH-----------------HHHTTHHHHHHHHGGGCCCHHH
T ss_pred             HHHHHhC-CCcEEEeCCC-CCcccHHHHHHHHhCCCEEecc-----------------eeecCCceEEEEEeecCCCHHH
Confidence            5555444 1112222221 01000 0000011111122222                 1244566554 566  888887


Q ss_pred             cch-h---hhhHHHHHHHHHhcCCcc
Q 006607          613 CGQ-T---MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       613 ~G~-i---v~~i~~iw~aa~kHGF~p  634 (639)
                      +-+ +   ++..++||+.|.++|-.|
T Consensus       306 v~~~l~~i~~~~~~i~~~~~~~~~~~  331 (364)
T 1leh_A          306 AMKRVDGIYDSIEKIFAISKRDGVPS  331 (364)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            665 3   466679999999988543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=95.91  E-value=0.0088  Score=60.64  Aligned_cols=45  Identities=13%  Similarity=0.217  Sum_probs=40.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .|.++++|+++  =||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus         7 gKvalVTGas~--GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~   53 (254)
T 4fn4_A            7 NKVVIVTGAGS--GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG   53 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999999988644

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.88  E-value=0.007  Score=61.32  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         8 gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   54 (280)
T 3tox_A            8 GKIAIVTGASS--GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG   54 (280)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46799999998  9999999999999999999  999999999888643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=95.88  E-value=0.0089  Score=59.27  Aligned_cols=43  Identities=14%  Similarity=0.220  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         9 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   53 (260)
T 2ae2_A            9 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQW   53 (260)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  8888888776664

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=95.88  E-value=0.0098  Score=59.72  Aligned_cols=45  Identities=18%  Similarity=0.285  Sum_probs=39.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.++++
T Consensus        26 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   72 (266)
T 3grp_A           26 TGRKALVTGATG--GIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG   72 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            457899999998  9999999999999999999  88899988877654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.87  E-value=0.0088  Score=59.26  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=38.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++.
T Consensus         1 k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   45 (248)
T 3asu_A            1 MIVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG   45 (248)
T ss_dssp             CEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            3689999998  9999999999999999998  88899988887754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.87  E-value=0.0082  Score=60.45  Aligned_cols=44  Identities=14%  Similarity=0.163  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        26 ~k~vlITGasg--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (302)
T 1w6u_A           26 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS   71 (302)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888887777653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.87  E-value=0.0087  Score=60.37  Aligned_cols=44  Identities=11%  Similarity=0.251  Sum_probs=39.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus        22 k~vlVTGas~--gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~   67 (272)
T 2nwq_A           22 STLFITGATS--GFGEACARRFAEAGWSLVLTGRREERLQALAGELSA   67 (272)
T ss_dssp             CEEEESSTTT--SSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             cEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc
Confidence            6799999998  9999999999999999998  888999988877543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.86  E-value=0.01  Score=59.15  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (278)
T 1spx_A            6 EKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQI   50 (278)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888988887765

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.85  E-value=0.0078  Score=58.75  Aligned_cols=43  Identities=19%  Similarity=0.235  Sum_probs=37.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+ +++.+++++++
T Consensus         7 ~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (258)
T 3afn_B            7 GKRVLITGSSQ--GIGLATARLFARAGAKVGLHGRKAPANIDETIASM   52 (258)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHH
Confidence            46799999998  9999999999999999988  77 78888777664

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.85  E-value=0.014  Score=57.38  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         7 ~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (264)
T 2pd6_A            7 SALALVTGAGS--GIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG   52 (264)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=95.84  E-value=0.015  Score=57.70  Aligned_cols=46  Identities=15%  Similarity=0.182  Sum_probs=40.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus        11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (263)
T 3ak4_A           11 SGRKAIVTGGSK--GIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN   58 (263)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc
Confidence            346799999998  9999999999999999998  888888888777643

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.83  E-value=0.0088  Score=59.45  Aligned_cols=45  Identities=18%  Similarity=0.336  Sum_probs=40.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (256)
T 3gaf_A           11 NDAVAIVTGAAA--GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR   57 (256)
T ss_dssp             TTCEEEECSCSS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88899988887754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.83  E-value=0.011  Score=59.54  Aligned_cols=43  Identities=14%  Similarity=0.150  Sum_probs=37.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        44 ~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l   88 (285)
T 2c07_A           44 NKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI   88 (285)
T ss_dssp             SCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  7888888777664

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=95.83  E-value=0.01  Score=59.44  Aligned_cols=43  Identities=16%  Similarity=0.224  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++
T Consensus        21 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~   65 (273)
T 1ae1_A           21 GTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIW   65 (273)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888888777664

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.82  E-value=0.012  Score=61.13  Aligned_cols=44  Identities=7%  Similarity=0.149  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-Cc-EEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~-~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|+||  .||+++|+.|.++ |. +|.+  |++++.+.+++++.
T Consensus        21 ~k~vlVTGatG--~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~   68 (344)
T 2gn4_A           21 NQTILITGGTG--SFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN   68 (344)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc
Confidence            46899999999  9999999999998 97 8887  88888887776654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.82  E-value=0.0093  Score=59.98  Aligned_cols=46  Identities=7%  Similarity=0.038  Sum_probs=39.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   73 (277)
T 4fc7_A           26 RDKVAFITGGGS--GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG   73 (277)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  888888887777543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.81  E-value=0.0097  Score=58.85  Aligned_cols=42  Identities=21%  Similarity=0.248  Sum_probs=37.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   46 (256)
T 1geg_A            3 KVALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEI   46 (256)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            5789999998  9999999999999999988  8888888877665

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.80  E-value=0.01  Score=59.82  Aligned_cols=44  Identities=18%  Similarity=0.166  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus        24 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~   69 (279)
T 3sju_A           24 PQTAFVTGVSS--GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR   69 (279)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  89999988877753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.80  E-value=0.012  Score=58.78  Aligned_cols=45  Identities=18%  Similarity=0.193  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.++.+.
T Consensus         5 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (281)
T 3m1a_A            5 AKVWLVTGASS--GFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD   51 (281)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTT
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccC
Confidence            46899999998  9999999999999999998  999999998887644

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=95.80  E-value=0.01  Score=59.11  Aligned_cols=45  Identities=24%  Similarity=0.305  Sum_probs=39.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        12 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   58 (267)
T 1iy8_A           12 TDRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL   58 (267)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            346899999998  9999999999999999988  88888888777653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.79  E-value=0.011  Score=58.12  Aligned_cols=44  Identities=14%  Similarity=0.145  Sum_probs=38.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++++++
T Consensus        11 ~~k~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (265)
T 2o23_A           11 KGLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL   56 (265)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh
Confidence            346899999998  9999999999999999988  8888888887765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.79  E-value=0.011  Score=59.15  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=38.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus        30 ~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l   75 (272)
T 1yb1_A           30 TGEIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC   75 (272)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  8888888877664

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.79  E-value=0.0087  Score=59.97  Aligned_cols=46  Identities=11%  Similarity=0.071  Sum_probs=39.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.++..+++..
T Consensus        11 ~~k~vlITGas~--GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~   58 (311)
T 3o26_A           11 KRRCAVVTGGNK--GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN   58 (311)
T ss_dssp             -CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCcEEEEecCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  899888887777543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=95.78  E-value=0.012  Score=58.18  Aligned_cols=46  Identities=17%  Similarity=0.206  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         8 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   55 (248)
T 3op4_A            8 EGKVALVTGASR--GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD   55 (248)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc
Confidence            456899999998  9999999999999999998  889999988877644

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.78  E-value=0.0082  Score=58.94  Aligned_cols=43  Identities=14%  Similarity=0.221  Sum_probs=34.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.++..++
T Consensus        13 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~   57 (265)
T 1h5q_A           13 VNKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEK   57 (265)
T ss_dssp             TTEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHH
Confidence            356899999998  9999999999999999988  655555444333

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.77  E-value=0.0094  Score=59.94  Aligned_cols=43  Identities=21%  Similarity=0.343  Sum_probs=38.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++++++
T Consensus        28 ~k~vlITGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   72 (286)
T 1xu9_A           28 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC   72 (286)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8999988887764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.76  E-value=0.011  Score=59.33  Aligned_cols=43  Identities=14%  Similarity=0.242  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        22 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l   66 (277)
T 2rhc_B           22 SEVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL   66 (277)
T ss_dssp             SCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  8888888777665

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=95.75  E-value=0.011  Score=59.14  Aligned_cols=46  Identities=11%  Similarity=0.190  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++++++++++++.
T Consensus        10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (271)
T 3tzq_B           10 ENKVAIITGACG--GIGLETSRVLARAGARVVLADLPETDLAGAAASVGR   57 (271)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCT
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC
Confidence            356899999998  9999999999999999998  889999988877643

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.75  E-value=0.012  Score=58.46  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (262)
T 1zem_A            7 GKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVR   52 (262)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.0079  Score=60.87  Aligned_cols=46  Identities=22%  Similarity=0.147  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   79 (281)
T 4dry_A           32 EGRIALVTGGGT--GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG   79 (281)
T ss_dssp             --CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456899999998  9999999999999999999  899999988877643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=95.74  E-value=0.011  Score=58.56  Aligned_cols=43  Identities=26%  Similarity=0.237  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus         6 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   50 (253)
T 1hxh_A            6 GKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL   50 (253)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            46799999998  9999999999999999998  8888888887776

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=95.72  E-value=0.011  Score=58.54  Aligned_cols=44  Identities=20%  Similarity=0.272  Sum_probs=39.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++
T Consensus         6 gk~vlVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (247)
T 3rwb_A            6 GKTALVTGAAQ--GIGKAIAARLAADGATVIVSDINAEGAKAAAASIG   51 (247)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence            46799999998  9999999999999999998  89999998887763

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.71  E-value=0.0091  Score=59.10  Aligned_cols=46  Identities=13%  Similarity=0.221  Sum_probs=40.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        11 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   58 (252)
T 3f1l_A           11 NDRIILVTGASD--GIGREAAMTYARYGATVILLGRNEEKLRQVASHINE   58 (252)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988877544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.70  E-value=0.011  Score=58.52  Aligned_cols=44  Identities=14%  Similarity=0.233  Sum_probs=38.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++
T Consensus        13 ~~k~vlITGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~   58 (266)
T 1xq1_A           13 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW   58 (266)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            346899999998  9999999999999999998  8888888776664

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.70  E-value=0.012  Score=58.67  Aligned_cols=44  Identities=20%  Similarity=0.213  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus         4 ~k~vlVTGas~--gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~   50 (258)
T 3oid_A            4 NKCALVTGSSR--GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE   50 (258)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEecCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999887   78888888877753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.70  E-value=0.011  Score=58.09  Aligned_cols=43  Identities=19%  Similarity=0.258  Sum_probs=37.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++++++
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   49 (246)
T 2uvd_A            4 GKVALVTGASR--GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI   49 (246)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  6 788888777665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.67  E-value=0.01  Score=61.99  Aligned_cols=127  Identities=13%  Similarity=0.135  Sum_probs=75.4

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhCCcccccce--e
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRIPVEAQHNL--V  516 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~---~~~~~~l~~~~~~~~~~~l--~  516 (639)
                      |||-....+.--..+....++|+|+|| |  -.|+|+|.+|++.|. +|++  |+   .++.++|.+++........  +
T Consensus       130 TD~~Gf~~~L~~~~~~l~gk~~lVlGA-G--Gaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~  206 (312)
T 3t4e_A          130 TDGTGHIRAIKESGFDMRGKTMVLLGA-G--GAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVT  206 (312)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECC-S--HHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred             CcHHHHHHHHHhcCCCcCCCEEEEECc-C--HHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEe
Confidence            667666666433345556789999998 5  789999999999998 7887  88   7788888877654332221  1


Q ss_pred             eeccc---cc--cceeEEE----EcCc-CC--hh--hhhcCCCCceeecccccCCc-----CCC-CCceeecCCcccc
Q 006607          517 LSTSY---AA--HKTKIWL----VGDD-LT--GK--EQARAPKGTIFIPYTQIPPR-----KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       517 ~~~~~---~~--~~~~vwi----vg~~-~~--~~--~q~~a~~G~~f~~~~~~~~~-----~~R-~dc~y~~~~a~~~  574 (639)
                      ...++   ++  ++++++|    +|-. .+  +-  +....+++..++|+.=-|.+     +-| +-|.+..+..|-+
T Consensus       207 ~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~~Gl~MLv  284 (312)
T 3t4e_A          207 DLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLL  284 (312)
T ss_dssp             ETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHHTTCEEECHHHHHH
T ss_pred             chHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCCeEECcHHHHH
Confidence            11122   22  4667877    3310 00  10  22245677777777633322     112 4566666655543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.67  E-value=0.011  Score=58.63  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus         5 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (260)
T 2qq5_A            5 GQVCVVTGASR--GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ   50 (260)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999988  88888888877653

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.67  E-value=0.0092  Score=64.24  Aligned_cols=127  Identities=14%  Similarity=0.237  Sum_probs=85.2

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc----hhh----HHHHHhhCCccccc
Q 006607          450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC----KDD----YEKLKLRIPVEAQH  513 (639)
Q Consensus       450 ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~----~~~----~~~l~~~~~~~~~~  513 (639)
                      .+.|.+++..+     -...+|++.||-   ..|.++|+.|...|. +|++  |+    ++|    +..+|+++..+...
T Consensus       174 V~lAal~~A~~i~g~~l~~~kVVv~GAG---aAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~  250 (388)
T 1vl6_A          174 VVSAAFLNALKLTEKKIEEVKVVVNGIG---AAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP  250 (388)
T ss_dssp             HHHHHHHHHHHHHTCCTTTCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHhCCCCCCcEEEEECCC---HHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc
Confidence            34455555443     257799999998   899999999999998 7888  55    555    66666665544321


Q ss_pred             ceeeeccccc--cceeEEE---EcCcCChhhhhcCCCCceeecccccCCcCCC-------CCceeecCCccccCCCCccc
Q 006607          514 NLVLSTSYAA--HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQIPPRKLR-------KDCFYHSTPAMIIPPSLSNM  581 (639)
Q Consensus       514 ~l~~~~~~~~--~~~~vwi---vg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R-------~dc~y~~~~a~~~P~~~~~~  581 (639)
                      . ....++++  +.++|.|   .+..+++|..++|.++.++.+.|. |..|.-       ..|.+.++ -...|+..+|+
T Consensus       251 ~-~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt~E~~p~~a~~~g~~i~atG-r~~~p~Q~NN~  327 (388)
T 1vl6_A          251 E-RLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PVPEIDPELAREAGAFIVATG-RSDHPNQVNNL  327 (388)
T ss_dssp             T-CCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SSCSSCHHHHHHTTCSEEEES-CTTSSSBCCGG
T ss_pred             c-CchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CCCCCCHHHHHHhcCeEEEeC-CCCCCCcCCce
Confidence            1 12234664  7788877   568899999999999999999985 332222       22666555 33456666665


Q ss_pred             c
Q 006607          582 H  582 (639)
Q Consensus       582 ~  582 (639)
                      .
T Consensus       328 ~  328 (388)
T 1vl6_A          328 L  328 (388)
T ss_dssp             G
T ss_pred             e
Confidence            4

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.66  E-value=0.013  Score=58.85  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (280)
T 1xkq_A            6 NKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIIL   51 (280)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.66  E-value=0.012  Score=58.61  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus        26 ~k~vlITGas~--gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   72 (272)
T 4e3z_A           26 TPVVLVTGGSR--GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT   72 (272)
T ss_dssp             SCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH
Confidence            46799999998  9999999999999999966   78888888877653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.66  E-value=0.0084  Score=60.37  Aligned_cols=45  Identities=13%  Similarity=0.166  Sum_probs=40.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++.
T Consensus        25 ~gk~~lVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~   71 (271)
T 4ibo_A           25 GGRTALVTGSSR--GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR   71 (271)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999999  88899888887753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=95.65  E-value=0.011  Score=58.38  Aligned_cols=45  Identities=18%  Similarity=0.195  Sum_probs=31.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++++
T Consensus         6 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (257)
T 3tpc_A            6 KSRVFIVTGASS--GLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG   52 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESSCC----------
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC
Confidence            346799999998  9999999999999999998  88888888777764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=95.65  E-value=0.012  Score=57.13  Aligned_cols=43  Identities=26%  Similarity=0.241  Sum_probs=38.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ..+.|+++||||  -||+++|+.|.++|.+|.+  |+.++.+++++.
T Consensus        20 ~~~~ilVtGatG--~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~   64 (236)
T 3e8x_A           20 QGMRVLVVGANG--KVARYLLSELKNKGHEPVAMVRNEEQGPELRER   64 (236)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT
T ss_pred             CCCeEEEECCCC--hHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC
Confidence            356899999999  9999999999999999998  999998888764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.64  E-value=0.013  Score=57.62  Aligned_cols=43  Identities=19%  Similarity=0.217  Sum_probs=37.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++++++
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l   52 (261)
T 1gee_A            7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI   52 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH
Confidence            46799999998  9999999999999999988  7 777887776664

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.64  E-value=0.012  Score=58.03  Aligned_cols=44  Identities=25%  Similarity=0.319  Sum_probs=37.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus         4 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   50 (246)
T 3osu_A            4 TKSALVTGASR--GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK   50 (246)
T ss_dssp             SCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999987   46788888877654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.63  E-value=0.015  Score=56.78  Aligned_cols=44  Identities=20%  Similarity=0.203  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         6 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   51 (251)
T 1zk4_A            6 GKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG   51 (251)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh
Confidence            46799999998  9999999999999999988  88888888877654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.62  E-value=0.011  Score=59.35  Aligned_cols=45  Identities=16%  Similarity=0.209  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        27 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   73 (270)
T 3ftp_A           27 DKQVAIVTGASR--GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK   73 (270)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  88888888877754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.61  E-value=0.011  Score=56.37  Aligned_cols=39  Identities=10%  Similarity=0.078  Sum_probs=34.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +|+|+||||  .||+++|+.|.++|.+|..  |++++.+++..
T Consensus         2 kilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~   42 (224)
T 3h2s_A            2 KIAVLGATG--RAGSAIVAEARRRGHEVLAVVRDPQKAADRLG   42 (224)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC
T ss_pred             EEEEEcCCC--HHHHHHHHHHHHCCCEEEEEEecccccccccC
Confidence            589999999  9999999999999999988  88888776643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=95.59  E-value=0.014  Score=58.96  Aligned_cols=45  Identities=22%  Similarity=0.231  Sum_probs=40.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.++++
T Consensus        28 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   74 (277)
T 3gvc_A           28 AGKVAIVTGAGA--GIGLAVARRLADEGCHVLCADIDGDAADAAATKIG   74 (277)
T ss_dssp             TTCEEEETTTTS--THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            456899999998  9999999999999999998  89999998888763

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.57  E-value=0.013  Score=60.36  Aligned_cols=45  Identities=22%  Similarity=0.281  Sum_probs=40.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         8 ~k~vlVTGas~--gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~   54 (319)
T 3ioy_A            8 GRTAFVTGGAN--GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA   54 (319)
T ss_dssp             TCEEEEETTTS--THHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCch--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46899999998  9999999999999999988  999999988877543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.56  E-value=0.015  Score=56.58  Aligned_cols=42  Identities=19%  Similarity=0.260  Sum_probs=37.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-------EEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-------~v~~--~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.       +|.+  |++++.+++++++
T Consensus         3 k~vlITGasg--giG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~   53 (244)
T 2bd0_A            3 HILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC   53 (244)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHH
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHH
Confidence            5799999998  999999999999998       8888  8888888887765

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.56  E-value=0.012  Score=56.32  Aligned_cols=35  Identities=11%  Similarity=0.248  Sum_probs=30.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      +|+++||+|  -||+++|+.|.++|.+|..  |+.++.+
T Consensus         2 ~ilItGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~   38 (219)
T 3dqp_A            2 KIFIVGSTG--RVGKSLLKSLSTTDYQIYAGARKVEQVP   38 (219)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred             eEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCccchh
Confidence            589999999  9999999999999999998  7665543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.56  E-value=0.013  Score=56.89  Aligned_cols=42  Identities=26%  Similarity=0.331  Sum_probs=36.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         2 k~vlVTGasg--giG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~   46 (244)
T 1edo_A            2 PVVVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI   46 (244)
T ss_dssp             CEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            5789999998  9999999999999999976   7778888777664

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.52  E-value=0.013  Score=57.68  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=37.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  | ++++.+++.+++
T Consensus        20 ~~k~vlItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l   66 (274)
T 1ja9_A           20 AGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL   66 (274)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6 777887776664

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=95.52  E-value=0.018  Score=58.00  Aligned_cols=47  Identities=17%  Similarity=0.191  Sum_probs=39.1

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .-..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++.
T Consensus        28 ~l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~   77 (271)
T 3v2g_A           28 SLAGKTAFVTGGSR--GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE   77 (271)
T ss_dssp             CCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence            34567899999998  9999999999999999988   45677887777653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.52  E-value=0.011  Score=59.65  Aligned_cols=45  Identities=20%  Similarity=0.279  Sum_probs=40.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        32 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   78 (275)
T 4imr_A           32 RGRTALVTGSSR--GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRII   78 (275)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence            457899999998  9999999999999999998  88889888887753

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.52  E-value=0.0095  Score=60.44  Aligned_cols=47  Identities=19%  Similarity=0.164  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++..+++...
T Consensus         8 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~   56 (255)
T 4g81_D            8 TGKTALVTGSAR--GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK   56 (255)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            456789999997  9999999999999999999  9999999888776543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.51  E-value=0.015  Score=58.59  Aligned_cols=44  Identities=14%  Similarity=0.212  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        18 ~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~   63 (303)
T 1yxm_A           18 GQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQ   63 (303)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999998  88888887776653

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.50  E-value=0.015  Score=56.89  Aligned_cols=44  Identities=14%  Similarity=0.135  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|++ +|.+|.+  |+.++.+++.+++.
T Consensus         4 ~k~vlITGasg--gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~   50 (276)
T 1wma_A            4 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ   50 (276)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHH
Confidence            46799999998  999999999999 9999998  88888887776653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.49  E-value=0.014  Score=59.05  Aligned_cols=44  Identities=16%  Similarity=0.366  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  | +.++.+++++++.
T Consensus        25 ~k~~lVTGas~--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   71 (281)
T 3v2h_A           25 TKTAVITGSTS--GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVA   71 (281)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHh
Confidence            46899999998  9999999999999999998  5 6778888777754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.48  E-value=0.02  Score=58.51  Aligned_cols=31  Identities=13%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..++|+|+||||  -||+++++.|.++|.+|..
T Consensus        24 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   54 (351)
T 3ruf_A           24 SPKTWLITGVAG--FIGSNLLEKLLKLNQVVIG   54 (351)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEECCCc--HHHHHHHHHHHHCCCEEEE
Confidence            467899999999  9999999999999999988

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.44  E-value=0.016  Score=57.26  Aligned_cols=42  Identities=12%  Similarity=0.244  Sum_probs=36.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--HHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++  .+++.+++
T Consensus         3 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   48 (258)
T 3a28_C            3 KVAMVTGGAQ--GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLI   48 (258)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH
Confidence            5789999998  9999999999999999998  77777  77776664

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.43  E-value=0.017  Score=57.62  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=36.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  | +++..+.+++++
T Consensus        28 ~~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (271)
T 4iin_A           28 TGKNVLITGASK--GIGAEIAKTLASMGLKVWINYRSNAEVADALKNEL   74 (271)
T ss_dssp             SCCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            456899999998  9999999999999999988  5 566666666654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=95.43  E-value=0.016  Score=58.58  Aligned_cols=43  Identities=16%  Similarity=0.218  Sum_probs=39.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|+++  -||+|+|+.|+++|.+|.+  |++++.++++++.+
T Consensus         3 K~vlVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~   47 (247)
T 3ged_A            3 RGVIVTGGGH--GIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP   47 (247)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT
T ss_pred             CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC
Confidence            6899999997  9999999999999999999  89999998888754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.43  E-value=0.015  Score=59.24  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=39.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++++++.+++.
T Consensus        26 ~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   71 (297)
T 1xhl_A           26 GKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL   71 (297)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.42  E-value=0.012  Score=57.39  Aligned_cols=46  Identities=15%  Similarity=0.211  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus        13 ~~k~vlITGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   60 (247)
T 3i1j_A           13 KGRVILVTGAAR--GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS   60 (247)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh
Confidence            356899999998  9999999999999999998  999999988877543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.42  E-value=0.015  Score=56.27  Aligned_cols=44  Identities=20%  Similarity=0.276  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++++++++++.
T Consensus         5 ~k~vlVtGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   50 (234)
T 2ehd_A            5 KGAVLITGASR--GIGEATARLLHAKGYRVGLMARDEKRLQALAAELE   50 (234)
T ss_dssp             CCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh
Confidence            35799999998  9999999999999999988  88888888887764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.41  E-value=0.015  Score=57.95  Aligned_cols=44  Identities=18%  Similarity=0.227  Sum_probs=37.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |+.++.+++.+++.
T Consensus        26 ~k~vlVTGas~--gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~   72 (267)
T 4iiu_A           26 SRSVLVTGASK--GIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIV   72 (267)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999965   77777777766643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.41  E-value=0.011  Score=58.55  Aligned_cols=44  Identities=14%  Similarity=0.302  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++ .+++++++.
T Consensus         4 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   50 (260)
T 1x1t_A            4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLA   50 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH
Confidence            35799999998  9999999999999999998  77777 887777653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.41  E-value=0.021  Score=56.45  Aligned_cols=45  Identities=20%  Similarity=0.275  Sum_probs=38.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus        15 ~~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   61 (278)
T 2bgk_A           15 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG   61 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC
Confidence            356899999998  9999999999999999998  78777777776654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.39  E-value=0.017  Score=57.92  Aligned_cols=46  Identities=24%  Similarity=0.288  Sum_probs=38.7

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCC
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  508 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~~  508 (639)
                      -..+.|+|+|++|  -||+++|+.|+++|.+|.+  + ++++.+++++++.
T Consensus        26 l~~k~vlVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   74 (269)
T 4dmm_A           26 LTDRIALVTGASR--GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA   74 (269)
T ss_dssp             TTTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            3467899999998  9999999999999999988  4 7778887777653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=95.38  E-value=0.024  Score=56.32  Aligned_cols=44  Identities=23%  Similarity=0.194  Sum_probs=38.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+++.+++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~   52 (267)
T 2gdz_A            7 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH   52 (267)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            35799999998  9999999999999999988  88888877766654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.35  E-value=0.024  Score=55.97  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=36.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   ++++..+.+++++.
T Consensus         7 ~k~vlVTGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (264)
T 3i4f_A            7 VRHALITAGTK--GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK   53 (264)
T ss_dssp             CCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG
T ss_pred             cCEEEEeCCCc--hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH
Confidence            36799999998  9999999999999999988   44556666666543

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=95.33  E-value=0.068  Score=56.55  Aligned_cols=147  Identities=10%  Similarity=-0.052  Sum_probs=86.6

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHHH-------HHH-hcCcCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVV-NSLPKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------~v~-~~i~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++.=-=|....+-.--+..+--+|+ +.-.-+.||+.+|+.       +.. .-.+++.++|.++|+ |  .+|+
T Consensus        66 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lT~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  142 (350)
T 1x7d_A           66 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGN-G--AQSE  142 (350)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--TTHH
T ss_pred             EEEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEEEeehhhHHHHHHHHHhccccCCeEEEECC-c--HHHH
Confidence            577877652222222221112223333433 456889999988641       111 223567789999997 5  8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCCh-h---hhhcCCCCcee
Q 006607          480 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG-K---EQARAPKGTIF  549 (639)
Q Consensus       480 ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~-~---~q~~a~~G~~f  549 (639)
                      ++++.|+  +...+|.+  |++++.+++++++....+.......++++  +++++++.-..-+. +   +-.+.++|+++
T Consensus       143 ~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~~~pvl~~~~l~~G~~V  222 (350)
T 1x7d_A          143 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMHL  222 (350)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECGGGCCTTCEE
T ss_pred             HHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCCCCceecHHHcCCCCEE
Confidence            9999987  33456777  99999999988864321212112335553  67888773222110 0   11356899999


Q ss_pred             ecccccCCc
Q 006607          550 IPYTQIPPR  558 (639)
Q Consensus       550 ~~~~~~~~~  558 (639)
                      +.++-..|.
T Consensus       223 ~~vgs~~p~  231 (350)
T 1x7d_A          223 NAVGGDCPG  231 (350)
T ss_dssp             EECSCCBTT
T ss_pred             EECCCCCCC
Confidence            998864443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.31  E-value=0.03  Score=60.18  Aligned_cols=91  Identities=12%  Similarity=0.114  Sum_probs=66.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc----------ccce--------e-eeccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA----------QHNL--------V-LSTSY  521 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~----------~~~l--------~-~~~~~  521 (639)
                      .++|+++|+ |  .+|..+|+.|...|.+|++  ++.++++.+++. +...          ..+-        . +..++
T Consensus       184 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l  259 (381)
T 3p2y_A          184 PASALVLGV-G--VAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQAL  259 (381)
T ss_dssp             CCEEEEESC-S--HHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHH
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence            368999999 5  9999999999999999999  888888888662 2211          0010        0 01124


Q ss_pred             cc--cceeEEEE-----c----CcCChhhhhcCCCCceeecccccCCc
Q 006607          522 AA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       522 ~~--~~~~vwiv-----g----~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      ++  +++|++|.     |    ..++++..++++||++++|++ +++-
T Consensus       260 ~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA-~d~G  306 (381)
T 3p2y_A          260 EDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA-GETG  306 (381)
T ss_dssp             HHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT-GGGT
T ss_pred             HHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe-CCCC
Confidence            43  77888773     2    358899999999999999999 7665

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.30  E-value=0.027  Score=60.00  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=63.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCc--
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDD--  534 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~--  534 (639)
                      .++|+++|+ |  .||+++|+.+...|.+|+.  ++.++.+.+++..+...........++++  +.++++|.  |-.  
T Consensus       168 g~~V~ViG~-G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~  244 (377)
T 2vhw_A          168 PADVVVIGA-G--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA  244 (377)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence            468999998 7  9999999999999999988  88888888877554331100001112333  56677764  432  


Q ss_pred             -----CChhhhhcCCCCceeeccc
Q 006607          535 -----LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       535 -----~~~~~q~~a~~G~~f~~~~  553 (639)
                           ++.+....+++|.++++++
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va  268 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIA  268 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEe
Confidence                 2677788899999999999

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.30  E-value=0.016  Score=58.25  Aligned_cols=31  Identities=13%  Similarity=0.186  Sum_probs=28.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  496 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~  496 (639)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~   37 (313)
T 1qyd_A            5 SRVLIVGGTG--YIGKRIVNASISLGHPTYVLFRP   37 (313)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCcEEEEECC
Confidence            5699999999  9999999999999999887  65

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.29  E-value=0.018  Score=55.81  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=36.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         2 k~vlITGasg--giG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~   46 (245)
T 2ph3_A            2 RKALITGASR--GIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA   46 (245)
T ss_dssp             CEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            4789999998  9999999999999999987   6778887776654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.29  E-value=0.022  Score=56.84  Aligned_cols=45  Identities=13%  Similarity=0.229  Sum_probs=37.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+     ++.++.+++++++.
T Consensus        10 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~   59 (262)
T 3ksu_A           10 KNKVIVIAGGIK--NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE   59 (262)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHH
Confidence            456899999997  9999999999999999998     35567777777754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.28  E-value=0.021  Score=57.63  Aligned_cols=45  Identities=11%  Similarity=0.179  Sum_probs=38.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++.+++.
T Consensus        28 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~   75 (280)
T 4da9_A           28 ARPVAIVTGGRR--GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS   75 (280)
T ss_dssp             CCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH
Confidence            456799999998  9999999999999999988   47788888777653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.27  E-value=0.019  Score=58.29  Aligned_cols=47  Identities=13%  Similarity=0.007  Sum_probs=40.4

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ...+.|+++|++|  -+|+++|+.|+++|.+|.+  |+.++.+++.+++..
T Consensus       117 l~gk~vlVtGaaG--GiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~  165 (287)
T 1lu9_A          117 VKGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK  165 (287)
T ss_dssp             CTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh
Confidence            3457899999998  9999999999999999888  888899888877543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.26  E-value=0.044  Score=56.08  Aligned_cols=86  Identities=9%  Similarity=0.140  Sum_probs=61.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-Cc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-~~  534 (639)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.+    .+...++++  +.+++++  +. ..
T Consensus       156 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~~----~~~~~~l~~~l~~aDvVi~~~p~~~  227 (300)
T 2rir_A          156 HGSQVAVLGL-G--RTGMTIARTFAALGANVKVGARSSAHLARITE-MGLV----PFHTDELKEHVKDIDICINTIPSMI  227 (300)
T ss_dssp             TTSEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCE----EEEGGGHHHHSTTCSEEEECCSSCC
T ss_pred             CCCEEEEEcc-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCe----EEchhhHHHHhhCCCEEEECCChhh
Confidence            4678999997 6  9999999999999999998  77777666544 2211    111233443  5677766  22 34


Q ss_pred             CChhhhhcCCCCceeeccccc
Q 006607          535 LTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~  555 (639)
                      +++++...+++|++++++++-
T Consensus       228 i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          228 LNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             BCHHHHTTSCTTCEEEECSST
T ss_pred             hCHHHHHhCCCCCEEEEEeCC
Confidence            567778889999999999953

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.26  E-value=0.015  Score=57.96  Aligned_cols=44  Identities=16%  Similarity=0.337  Sum_probs=38.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  | ++++.+++.+++.
T Consensus        11 ~k~~lVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   57 (276)
T 1mxh_A           11 CPAAVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN   57 (276)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence            35799999998  9999999999999999998  7 8888888877753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.26  E-value=0.019  Score=57.35  Aligned_cols=45  Identities=29%  Similarity=0.326  Sum_probs=38.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus        17 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~   64 (270)
T 3is3_A           17 DGKVALVTGSGR--GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK   64 (270)
T ss_dssp             TTCEEEESCTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            357899999997  9999999999999999988   56777887777653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.26  E-value=0.024  Score=60.06  Aligned_cols=90  Identities=13%  Similarity=0.122  Sum_probs=61.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcC----
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  533 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  533 (639)
                      ++|+++|+ |  .||+++|+.|.+.|.+|++  ++.++.+.++++.+...........++++  +.++++|  +|.    
T Consensus       167 ~~V~ViGa-G--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~  243 (369)
T 2eez_A          167 ASVVILGG-G--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAK  243 (369)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccc
Confidence            68999999 8  9999999999999999988  88888888876554321111001112332  5667766  331    


Q ss_pred             ---cCChhhhhcCCCCceeecccccCC
Q 006607          534 ---DLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       534 ---~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                         .++.+....+++|.++++++ .+.
T Consensus       244 ~~~li~~~~l~~mk~gg~iV~v~-~~~  269 (369)
T 2eez_A          244 APKLVTRDMLSLMKEGAVIVDVA-VDQ  269 (369)
T ss_dssp             --CCSCHHHHTTSCTTCEEEECC----
T ss_pred             cchhHHHHHHHhhcCCCEEEEEe-cCC
Confidence               24667788889999999998 443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.26  E-value=0.014  Score=58.41  Aligned_cols=32  Identities=9%  Similarity=0.121  Sum_probs=28.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   36 (307)
T 2gas_A            3 NKILILGPTG--AIGRHIVWASIKAGNPTYALVRKT   36 (307)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHhCCCcEEEEECCC
Confidence            4699999999  9999999999999988877  765

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.25  E-value=0.0074  Score=57.87  Aligned_cols=36  Identities=17%  Similarity=0.247  Sum_probs=32.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ++|+++||||  -||+++++.|.++|.+|..  |++++.+
T Consensus         5 ~~ilItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~   42 (227)
T 3dhn_A            5 KKIVLIGASG--FVGSALLNEALNRGFEVTAVVRHPEKIK   42 (227)
T ss_dssp             CEEEEETCCH--HHHHHHHHHHHTTTCEEEEECSCGGGCC
T ss_pred             CEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEEcCcccch
Confidence            5799999998  9999999999999999998  7766654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.23  E-value=0.018  Score=56.02  Aligned_cols=43  Identities=14%  Similarity=0.230  Sum_probs=36.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++
T Consensus         5 ~~~vlItGasg--giG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~   50 (247)
T 2hq1_A            5 GKTAIVTGSSR--GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEF   50 (247)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHH
T ss_pred             CcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHH
Confidence            36799999998  9999999999999999987   5667777776654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.20  E-value=0.0097  Score=63.27  Aligned_cols=113  Identities=11%  Similarity=-0.008  Sum_probs=61.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhCCcccccceeeeccccc-ccee-EEEEcCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRIPVEAQHNLVLSTSYAA-HKTK-IWLVGDD  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~-vwivg~~  534 (639)
                      ..+.|+|+||||  -||+++|+.|.++|.+|.+  |+++   ..+++++++......      ...+ ...+ .++.||.
T Consensus        68 ~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~v~~v~~Dl  139 (427)
T 4f6c_A           68 PLGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSE------ETVEMMLSNIEVIVGDF  139 (427)
T ss_dssp             CCEEEEEECTTS--HHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCH------HHHHHHHTTEEEEEECC
T ss_pred             CCCEEEEecCCc--HHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccc------cccccccCceEEEeCCC
Confidence            356899999999  9999999999999999988  7666   445554443221100      0011 1122 3667777


Q ss_pred             CChhhhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhhHHH
Q 006607          535 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRI  598 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a  598 (639)
                      .+++...                ...+-|+.|+..+.+..+.+++.+..-|..-.+.++.||..
T Consensus       140 ~d~~~l~----------------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~  187 (427)
T 4f6c_A          140 ECMDDVV----------------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ  187 (427)
T ss_dssp             ---CCCC----------------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCC----------------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6655552                11346788877666655555443333344444455555543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.20  E-value=0.079  Score=54.08  Aligned_cols=88  Identities=20%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-Cc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-DD  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-~~  534 (639)
                      ..++|.++|+ |  .||+++|+.|...|.+|+.  |+.++.+.+++ .+.+.    +...++++  +.+++++  +. ..
T Consensus       154 ~g~~v~IiG~-G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~----~~~~~l~~~l~~aDvVi~~~p~~~  225 (293)
T 3d4o_A          154 HGANVAVLGL-G--RVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEP----FHISKAAQELRDVDVCINTIPALV  225 (293)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTSEE----EEGGGHHHHTTTCSEEEECCSSCC
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee----cChhhHHHHhcCCCEEEECCChHH
Confidence            5678999996 6  9999999999999999988  66666665542 22111    11223433  5666655  22 34


Q ss_pred             CChhhhhcCCCCceeecccccCC
Q 006607          535 LTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ++++....+++|++++++++-|.
T Consensus       226 i~~~~l~~mk~~~~lin~ar~~~  248 (293)
T 3d4o_A          226 VTANVLAEMPSHTFVIDLASKPG  248 (293)
T ss_dssp             BCHHHHHHSCTTCEEEECSSTTC
T ss_pred             hCHHHHHhcCCCCEEEEecCCCC
Confidence            56677888999999999996443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.18  E-value=0.02  Score=57.48  Aligned_cols=45  Identities=20%  Similarity=0.238  Sum_probs=37.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++++++.
T Consensus        26 ~~k~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~   73 (267)
T 3u5t_A           26 TNKVAIVTGASR--GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE   73 (267)
T ss_dssp             -CCEEEEESCSS--HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999987   66777887777643

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=95.14  E-value=0.027  Score=58.06  Aligned_cols=120  Identities=11%  Similarity=-0.002  Sum_probs=74.8

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      |||-....+.--..++...++|+++|+.   -.|+|++.+|.+.|. +|++  |+.++.++|.+++....      ..++
T Consensus       104 TD~~G~~~~L~~~~~~~~~k~vlvlGaG---Gaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~------~~~l  174 (282)
T 3fbt_A          104 TDYIGFGKMLSKFRVEIKNNICVVLGSG---GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVIS------YDEL  174 (282)
T ss_dssp             CHHHHHHHHHHHTTCCCTTSEEEEECSS---TTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEE------HHHH
T ss_pred             CcHHHHHHHHHHcCCCccCCEEEEECCc---HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCccc------HHHH
Confidence            5665555444333455567899999996   579999999999998 8888  99999999887653110      1111


Q ss_pred             cccceeEEE----EcCc--C--ChhhhhcCCCCceeecccccCCc------CCC-CCceeecCCcccc
Q 006607          522 AAHKTKIWL----VGDD--L--TGKEQARAPKGTIFIPYTQIPPR------KLR-KDCFYHSTPAMII  574 (639)
Q Consensus       522 ~~~~~~vwi----vg~~--~--~~~~q~~a~~G~~f~~~~~~~~~------~~R-~dc~y~~~~a~~~  574 (639)
                      ++.+++++|    +|-.  .  .|-+....+++++++|+. -.|.      +.| +-|.+..+..|-+
T Consensus       175 ~~l~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~~~Gl~MLv  241 (282)
T 3fbt_A          175 SNLKGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLI-YNPVETLFLKYARESGVKAVNGLYMLV  241 (282)
T ss_dssp             TTCCCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESC-CSSSSCHHHHHHHHTTCEEECSHHHHH
T ss_pred             HhccCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEe-eCCCCCHHHHHHHHCcCeEeCcHHHHH
Confidence            111456666    2210  0  011222347888999988 4443      222 6688877777755

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.13  E-value=0.023  Score=55.95  Aligned_cols=43  Identities=14%  Similarity=0.251  Sum_probs=38.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus         5 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   49 (245)
T 1uls_A            5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAV   49 (245)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            46799999998  9999999999999999998  8889998887766

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.12  E-value=0.016  Score=58.34  Aligned_cols=44  Identities=18%  Similarity=0.284  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+. ++.+++++++.
T Consensus        23 ~k~~lVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~   69 (288)
T 2x9g_A           23 APAAVVTGAAK--RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELN   69 (288)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  777 88888777653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.12  E-value=0.0064  Score=59.35  Aligned_cols=38  Identities=24%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEK  502 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~  502 (639)
                      .+.|+|+||+|  .||+++|+.|.++| .+|.+  |++++.++
T Consensus        23 mk~vlVtGatG--~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~   63 (236)
T 3qvo_A           23 MKNVLILGAGG--QIARHVINQLADKQTIKQTLFARQPAKIHK   63 (236)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEEEEESSGGGSCS
T ss_pred             ccEEEEEeCCc--HHHHHHHHHHHhCCCceEEEEEcChhhhcc
Confidence            46899999999  99999999999999 88888  77776543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.11  E-value=0.026  Score=56.54  Aligned_cols=45  Identities=13%  Similarity=0.220  Sum_probs=38.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-------------~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |             ++++++++++++.
T Consensus        14 ~gk~~lVTGas~--gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (280)
T 3pgx_A           14 QGRVAFITGAAR--GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE   73 (280)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  5             6788888777643

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.08  E-value=0.027  Score=55.97  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=36.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++
T Consensus         7 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~   53 (259)
T 3edm_A            7 TNRTIVVAGAGR--DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI   53 (259)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998   5666777666654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.05  E-value=0.021  Score=57.58  Aligned_cols=45  Identities=16%  Similarity=0.217  Sum_probs=39.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        28 ~~k~vlVTGas~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   74 (276)
T 2b4q_A           28 AGRIALVTGGSR--GIGQMIAQGLLEAGARVFICARDAEACADTATRLS   74 (276)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            356899999998  9999999999999999988  88888888877754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.05  E-value=0.02  Score=58.18  Aligned_cols=46  Identities=22%  Similarity=0.226  Sum_probs=39.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.   +|.+  |+.++++++++++..
T Consensus        32 ~~k~~lVTGas~--GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~   82 (287)
T 3rku_A           32 AKKTVLITGASA--GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ   82 (287)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh
Confidence            356899999998  999999999999887   8888  999999998887644

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.05  E-value=0.025  Score=56.65  Aligned_cols=44  Identities=14%  Similarity=0.242  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         9 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   54 (270)
T 1yde_A            9 GKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELP   54 (270)
T ss_dssp             TCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence            46799999998  9999999999999999998  88888888887764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=95.04  E-value=0.021  Score=54.11  Aligned_cols=38  Identities=8%  Similarity=0.115  Sum_probs=34.4

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      +|+|+||||  -||+++++.|.++|.+|..  |++++.+.+.
T Consensus         2 kvlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~   41 (221)
T 3ew7_A            2 KIGIIGATG--RAGSRILEEAKNRGHEVTAIVRNAGKITQTH   41 (221)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCSHHHHHHC
T ss_pred             eEEEEcCCc--hhHHHHHHHHHhCCCEEEEEEcCchhhhhcc
Confidence            589999999  9999999999999999988  8888887664

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.01  E-value=0.019  Score=57.14  Aligned_cols=50  Identities=20%  Similarity=0.147  Sum_probs=40.3

Q ss_pred             HhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       456 ~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+..+-..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++
T Consensus        27 ~~~~~l~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~   78 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSG--GIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ   78 (279)
T ss_dssp             GGGGCCTTCEEEETTTTS--SHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence            343444567899999998  9999999999999999998  7777777766553

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=95.00  E-value=0.023  Score=48.53  Aligned_cols=39  Identities=15%  Similarity=0.129  Sum_probs=34.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~  504 (639)
                      .++|+++|+ |  .+|+++++.|.++| .+|.+  |++++.+.++
T Consensus         5 ~~~v~I~G~-G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~   46 (118)
T 3ic5_A            5 RWNICVVGA-G--KIGQMIAALLKTSSNYSVTVADHDLAALAVLN   46 (118)
T ss_dssp             CEEEEEECC-S--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred             cCeEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence            357999999 9  99999999999999 88887  8888888776

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.00  E-value=0.021  Score=56.84  Aligned_cols=46  Identities=15%  Similarity=0.127  Sum_probs=40.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++..
T Consensus         7 ~~k~~lVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   54 (265)
T 3lf2_A            7 SEAVAVVTGGSS--GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ   54 (265)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence            456899999998  9999999999999999998  899999888877544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=94.99  E-value=0.026  Score=54.73  Aligned_cols=43  Identities=19%  Similarity=0.220  Sum_probs=38.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++++.
T Consensus         7 ~~~vlVTGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~   51 (244)
T 1cyd_A            7 GLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC   51 (244)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS
T ss_pred             CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence            46799999998  9999999999999999988  8888888887764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=94.97  E-value=0.027  Score=54.77  Aligned_cols=44  Identities=20%  Similarity=0.334  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|.++|.+|.+  |++++.+++.++++
T Consensus         7 ~k~vlITGasg--giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (244)
T 3d3w_A            7 GRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECP   52 (244)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC
Confidence            46799999998  9999999999999999988  88888888877653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.96  E-value=0.019  Score=56.41  Aligned_cols=44  Identities=11%  Similarity=0.124  Sum_probs=36.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+++.+++
T Consensus        12 ~~k~vlITGas~--giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~   58 (256)
T 3ezl_A           12 SQRIAYVTGGMG--GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ   58 (256)
T ss_dssp             -CEEEEETTTTS--HHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence            578899999998  9999999999999999988   5666666655543

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=94.94  E-value=0.11  Score=54.13  Aligned_cols=145  Identities=11%  Similarity=0.057  Sum_probs=86.6

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHHH-------HHHhc-CcCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAAA-------VVVNS-LPKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnsltaa-------~v~~~-i~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++.=-=|..+.+-.--+..+--+|+ +.-..+.||+.+|+.       +.... -+++.++|.++|+ |  .+|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lt~~RTaa~s~laa~~la~~~~~~v~iIGa-G--~~a~  138 (322)
T 1omo_A           62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGC-G--TQAY  138 (322)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-S--HHHH
T ss_pred             eEEEEEecCCCccccCCCceeEEEEEEECCCCCEEEEEcCchHHHHHHHHHHHHHHHhccCCCCCEEEEEcC-c--HHHH
Confidence            577877653223223333333344545554 456899999998752       12222 2567789999998 5  8999


Q ss_pred             HHHHHHhc-c-CcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEEcCcCCh--hhhhcCCCCceeecc
Q 006607          480 AVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDLTG--KEQARAPKGTIFIPY  552 (639)
Q Consensus       480 ava~~L~~-~-~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~~~~~--~~q~~a~~G~~f~~~  552 (639)
                      +.+++|++ + ..+|.+  |++++.+++++++.... .... ..++++ .++++++.-..-..  -+-.+.++|+++++.
T Consensus       139 ~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~-~~~~-~~~~~e~v~aDvVi~aTp~~~pv~~~~~l~~G~~V~~i  216 (322)
T 1omo_A          139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-ISAS-VQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAI  216 (322)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CCEE-ECCHHHHTSSSEEEECCCCSSCCBCGGGCCTTCEEEEC
T ss_pred             HHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC-ceEE-ECCHHHHhCCCEEEEeeCCCCceecHHHcCCCeEEEEC
Confidence            99999995 3 456666  99999999988754321 1111 334433 35677662111100  011356899999998


Q ss_pred             cccCCc
Q 006607          553 TQIPPR  558 (639)
Q Consensus       553 ~~~~~~  558 (639)
                      +-..|.
T Consensus       217 g~~~p~  222 (322)
T 1omo_A          217 GADGPG  222 (322)
T ss_dssp             SCCSTT
T ss_pred             CCCCCC
Confidence            545444

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=94.94  E-value=0.027  Score=56.21  Aligned_cols=44  Identities=16%  Similarity=0.271  Sum_probs=36.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~------------~~~~~~l~~~~  507 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        12 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   69 (278)
T 3sx2_A           12 TGKVAFITGAAR--GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV   69 (278)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHH
Confidence            457899999998  9999999999999999998  54            66777666554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.92  E-value=0.039  Score=50.33  Aligned_cols=42  Identities=26%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~  507 (639)
                      .++|+++|+ |  .+|+.+|+.|.+.|.+|++  ++ +++.+++++..
T Consensus         3 ~~~vlI~G~-G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~   47 (153)
T 1id1_A            3 KDHFIVCGH-S--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL   47 (153)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh
Confidence            457999997 7  9999999999999999998  55 56677776543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.92  E-value=0.055  Score=54.18  Aligned_cols=79  Identities=13%  Similarity=0.131  Sum_probs=53.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEEcCcCC--h--
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVGDDLT--G--  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg~~~~--~--  537 (639)
                      +|.++|+ |  .+|+++|+.|.+.|.+|++  |+.++.++++++.+..       ..++++ ++++++|.-...+  +  
T Consensus       118 ~v~iiG~-G--~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-------~~~~~~~~~~Divi~~tp~~~~~~~  187 (263)
T 2d5c_A          118 PALVLGA-G--GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-------AVPLEKAREARLLVNATRVGLEDPS  187 (263)
T ss_dssp             CEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-------ECCGGGGGGCSEEEECSSTTTTCTT
T ss_pred             eEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-------hhhHhhccCCCEEEEccCCCCCCCC
Confidence            8999997 5  8999999999999988888  8888888887764432       122322 4566666322111  1  


Q ss_pred             ---hhhhcCCCCceeeccc
Q 006607          538 ---KEQARAPKGTIFIPYT  553 (639)
Q Consensus       538 ---~~q~~a~~G~~f~~~~  553 (639)
                         -+...+++|+++++++
T Consensus       188 ~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          188 ASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             CCSSCGGGSCSSSEEEESC
T ss_pred             CCCCCHHHcCCCCEEEEee
Confidence               0123457788888877

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.91  E-value=0.022  Score=57.64  Aligned_cols=32  Identities=3%  Similarity=0.000  Sum_probs=28.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      +.|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~   38 (321)
T 3c1o_A            5 EKIIIYGGTG--YIGKFMVRASLSFSHPTFIYARPL   38 (321)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cEEEEEcCCc--hhHHHHHHHHHhCCCcEEEEECCc
Confidence            4699999999  9999999999999998887  654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=94.91  E-value=0.027  Score=55.74  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=39.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   52 (260)
T 2z1n_A            7 GKLAVVTAGSS--GLGFASALELARNGARLLLFSRNREKLEAAASRIA   52 (260)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence            46799999998  9999999999999999998  88888888877754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.90  E-value=0.017  Score=60.73  Aligned_cols=90  Identities=10%  Similarity=0.095  Sum_probs=60.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccce-ee-e--ccccc--cceeEEE--E
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNL-VL-S--TSYAA--HKTKIWL--V  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l-~~-~--~~~~~--~~~~vwi--v  531 (639)
                      ..++|+|+|+..  -||+.+|+.|.+.|.+|++  |+..+..+..+++........ +. .  .++++  +++||+|  +
T Consensus       176 ~gk~vvVIG~G~--iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          176 YGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECCCc--chHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            578999999984  6799999999999999998  665554444444433221110 00 1  23554  7778877  4


Q ss_pred             cCc---CChhhhhcCCCCceeecccccCC
Q 006607          532 GDD---LTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       532 g~~---~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      |..   ++.+..   ++|++++|++ +|+
T Consensus       254 g~p~~vI~~e~v---k~GavVIDVg-i~r  278 (320)
T 1edz_A          254 PSENYKFPTEYI---KEGAVCINFA-CTK  278 (320)
T ss_dssp             CCTTCCBCTTTS---CTTEEEEECS-SSC
T ss_pred             CCCcceeCHHHc---CCCeEEEEcC-CCc
Confidence            432   666665   8999999999 654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=94.89  E-value=0.019  Score=58.05  Aligned_cols=33  Identities=12%  Similarity=0.180  Sum_probs=29.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ++|+|+||||  .||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~~   46 (318)
T 2r6j_A           12 SKILIFGGTG--YIGNHMVKGSLKLGHPTYVFTRPNS   46 (318)
T ss_dssp             CCEEEETTTS--TTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred             CeEEEECCCc--hHHHHHHHHHHHCCCcEEEEECCCC
Confidence            4699999999  9999999999999998877  6653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=94.88  E-value=0.026  Score=55.90  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=30.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~   44 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER   44 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH
Confidence            346899999997123999999999999999998  5543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=94.88  E-value=0.03  Score=55.86  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=36.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~------------~~~~~~l~~~~  507 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++++++
T Consensus         9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (287)
T 3pxx_A            9 QDKVVLVTGGAR--GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV   66 (287)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHH
Confidence            356899999998  9999999999999999998  55            66777666554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=94.85  E-value=0.045  Score=59.29  Aligned_cols=89  Identities=11%  Similarity=0.110  Sum_probs=64.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc--------------cccee-eec------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA--------------QHNLV-LST------  519 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~--------------~~~l~-~~~------  519 (639)
                      .++|+++|+ |  .+|.++|+.|...|.+|++  ++.++++.+++. +...              +.+ . ..+      
T Consensus       190 ~~kV~ViG~-G--~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~y-a~e~s~~~~~~  264 (405)
T 4dio_A          190 AAKIFVMGA-G--VAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGY-AKEMSGEYQVK  264 (405)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC------------------CHHHHH
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccch-hhhcchhhhhh
Confidence            368999999 5  9999999999999999999  888888888763 2211              001 1 011      


Q ss_pred             ---cccc--cceeEEEEc---------CcCChhhhhcCCCCceeecccccCC
Q 006607          520 ---SYAA--HKTKIWLVG---------DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       520 ---~~~~--~~~~vwivg---------~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                         ++++  +.+||+|-.         ..++++..++|+||++++|++ .++
T Consensus       265 ~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA-~d~  315 (405)
T 4dio_A          265 QAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA-VER  315 (405)
T ss_dssp             HHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT-GGG
T ss_pred             hHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe-CCC
Confidence               2332  677887732         348999999999999999999 554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.83  E-value=0.031  Score=55.32  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=37.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++|  .+|.+  |++++.++++++++
T Consensus         3 k~~lVTGas~--GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~   49 (254)
T 3kzv_A            3 KVILVTGVSR--GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG   49 (254)
T ss_dssp             CEEEECSTTS--HHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC
Confidence            5789999998  99999999999884  78877  89999999988764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=94.82  E-value=0.028  Score=55.47  Aligned_cols=44  Identities=20%  Similarity=0.228  Sum_probs=38.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~---~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|++   +|.+|.+  |++++.+++.+++.
T Consensus         6 ~k~~lVTGas~--gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~   54 (259)
T 1oaa_A            6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG   54 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCC--hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHH
Confidence            46789999998  999999999998   8999998  88888888877753

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.82  E-value=0.018  Score=53.84  Aligned_cols=36  Identities=11%  Similarity=0.128  Sum_probs=31.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ++|+++|++|  .||+++++.|.++|.+|..  |++++.+
T Consensus         4 ~~ilVtGatG--~iG~~l~~~l~~~g~~V~~~~r~~~~~~   41 (206)
T 1hdo_A            4 KKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRLP   41 (206)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeChhhcc
Confidence            5799999999  9999999999999999988  7766543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=94.79  E-value=0.036  Score=55.61  Aligned_cols=44  Identities=18%  Similarity=0.296  Sum_probs=37.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------------hhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------------KDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~----------------~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+                +++++++++++
T Consensus        10 ~~k~~lVTGas~--gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (286)
T 3uve_A           10 EGKVAFVTGAAR--GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV   71 (286)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHH
Confidence            356899999997  9999999999999999988  54                67777776664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.79  E-value=0.033  Score=56.17  Aligned_cols=32  Identities=13%  Similarity=0.051  Sum_probs=29.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      ++|+|+||||  -||+++++.|.++|.+|..  |++
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~   36 (311)
T 3m2p_A            3 LKIAVTGGTG--FLGQYVVESIKNDGNTPIILTRSI   36 (311)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCCC
Confidence            5799999999  9999999999999999988  553

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=94.78  E-value=0.03  Score=55.88  Aligned_cols=45  Identities=27%  Similarity=0.320  Sum_probs=39.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++.+++++++.
T Consensus        31 ~~k~vlVTGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~   77 (279)
T 1xg5_A           31 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECK   77 (279)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  88888888876643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.76  E-value=0.034  Score=54.35  Aligned_cols=44  Identities=25%  Similarity=0.284  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   +++++.+++.+++.
T Consensus         7 ~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~   53 (255)
T 3icc_A            7 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ   53 (255)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH
Confidence            46799999998  9999999999999999977   67777777766643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=94.74  E-value=0.011  Score=59.90  Aligned_cols=34  Identities=18%  Similarity=0.168  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.++
T Consensus         4 ~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~   39 (345)
T 2z1m_A            4 KRALITGIRG--QDGAYLAKLLLEKGYEVYGADRRSGE   39 (345)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            5799999999  9999999999999999988  65543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=94.74  E-value=0.032  Score=57.28  Aligned_cols=45  Identities=11%  Similarity=0.199  Sum_probs=36.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch----hhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK----DDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~----~~~~~l~~~~~  508 (639)
                      ..+.|+|+|+||  -||+++++.|.++|.+|..  |+.    ++++++++++.
T Consensus        26 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~   76 (352)
T 1sb8_A           26 QPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS   76 (352)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSC
T ss_pred             cCCeEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcc
Confidence            346899999999  9999999999999999988  543    45666666554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.73  E-value=0.022  Score=56.99  Aligned_cols=31  Identities=19%  Similarity=0.210  Sum_probs=28.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC  496 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~  496 (639)
                      +.|+|+||||  .||+++++.|.++|.+|..  |+
T Consensus         5 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~l~R~   37 (308)
T 1qyc_A            5 SRILLIGATG--YIGRHVAKASLDLGHPTFLLVRE   37 (308)
T ss_dssp             CCEEEESTTS--TTHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhCCCCEEEEECC
Confidence            5699999999  9999999999999988877  65

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=94.71  E-value=0.037  Score=55.37  Aligned_cols=43  Identities=21%  Similarity=0.332  Sum_probs=35.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~------------~~~~~~l~~~  506 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+            .++.+++.++
T Consensus         9 ~~k~~lVTGas~--gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   65 (281)
T 3s55_A            9 EGKTALITGGAR--GMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL   65 (281)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHH
Confidence            356899999998  9999999999999999998  65            5566665554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=94.66  E-value=0.042  Score=54.77  Aligned_cols=45  Identities=16%  Similarity=0.279  Sum_probs=37.3

Q ss_pred             CcEEEEecc--cCchhhHHHHHHHHhccCcEEEe--cchhh-HHHHHhhCCc
Q 006607          463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Ga--tg~~kig~ava~~L~~~~~~v~~--~~~~~-~~~l~~~~~~  509 (639)
                      .+.|+++|+  +|  -||+++|+.|+++|.+|.+  |++++ .++++++++.
T Consensus         7 ~k~vlVTGa~~s~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   56 (269)
T 2h7i_A            7 GKRILVSGIITDS--SIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPA   56 (269)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSS
T ss_pred             CCEEEEECCCCCC--chHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCC
Confidence            467999999  76  8999999999999999998  77665 5788777643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.66  E-value=0.037  Score=55.10  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=34.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~  506 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+   ++.++.+++.++
T Consensus        24 ~~k~vlITGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~   69 (269)
T 3gk3_A           24 AKRVAFVTGGMG--GLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH   69 (269)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH
T ss_pred             cCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH
Confidence            356789999998  9999999999999999988   555555555444

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.63  E-value=0.057  Score=53.11  Aligned_cols=38  Identities=16%  Similarity=0.303  Sum_probs=33.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEK  502 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~  502 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++ ++.++
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   47 (249)
T 2ew8_A            7 DKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEA   47 (249)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence            46799999998  9999999999999999998  776 66654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=94.62  E-value=0.039  Score=55.47  Aligned_cols=44  Identities=16%  Similarity=0.231  Sum_probs=35.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+ .+.++.+++.+++
T Consensus        30 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   74 (273)
T 3uf0_A           30 AGRTAVVTGAGS--GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEI   74 (273)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHH
Confidence            457899999998  9999999999999999998 3345556555553

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=94.59  E-value=0.079  Score=54.79  Aligned_cols=91  Identities=19%  Similarity=0.240  Sum_probs=62.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEE--EcCcCCh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL--VGDDLTG  537 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwi--vg~~~~~  537 (639)
                      .++|.++|+-   -+|+.+|+.|+ .|.+|++  ++++..+++++.+..+.-..+...+++++ ++++++|  +-+..+-
T Consensus        12 ~~~V~vIG~G---~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~aDlVieavpe~~~v   87 (293)
T 1zej_A           12 HMKVFVIGAG---LMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEKVKDCDIVMEAVFEDLNT   87 (293)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTTGGGCSEEEECCCSCHHH
T ss_pred             CCeEEEEeeC---HHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHHHcCCCEEEEcCcCCHHH
Confidence            5789999986   99999999999 9999999  88899998887743222122122335665 7888877  3222211


Q ss_pred             h-----hhhcCCCCceee-cccccCCc
Q 006607          538 K-----EQARAPKGTIFI-PYTQIPPR  558 (639)
Q Consensus       538 ~-----~q~~a~~G~~f~-~~~~~~~~  558 (639)
                      +     +...+ +|++++ ..|-+++.
T Consensus        88 k~~l~~~l~~~-~~~IlasntSti~~~  113 (293)
T 1zej_A           88 KVEVLREVERL-TNAPLCSNTSVISVD  113 (293)
T ss_dssp             HHHHHHHHHTT-CCSCEEECCSSSCHH
T ss_pred             HHHHHHHHhcC-CCCEEEEECCCcCHH
Confidence            1     23456 898885 66667776

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=94.58  E-value=0.027  Score=56.13  Aligned_cols=46  Identities=20%  Similarity=0.278  Sum_probs=39.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++.+++..
T Consensus         9 ~~k~~lVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~   56 (267)
T 3t4x_A            9 KGKTALVTGSTA--GIGKAIATSLVAEGANVLINGRREENVNETIKEIRA   56 (267)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence            346799999998  9999999999999999999  888888887777543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.55  E-value=0.018  Score=58.53  Aligned_cols=40  Identities=15%  Similarity=0.168  Sum_probs=32.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .+.|+|+|++|  -||+++|+.|.++|.+|.+  |+.++.++..
T Consensus         5 ~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~   46 (341)
T 3enk_A            5 KGTILVTGGAG--YIGSHTAVELLAHGYDVVIADNLVNSKREAI   46 (341)
T ss_dssp             SCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSSSCTHHH
T ss_pred             CcEEEEecCCc--HHHHHHHHHHHHCCCcEEEEecCCcchHHHH
Confidence            35899999999  9999999999999999988  6555444333

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=94.51  E-value=0.047  Score=54.58  Aligned_cols=44  Identities=16%  Similarity=0.215  Sum_probs=36.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-------------chhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-------------CKDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-------------~~~~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |             ++++++++.+++
T Consensus        10 ~~k~~lVTGas~--GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~   68 (277)
T 3tsc_A           10 EGRVAFITGAAR--GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV   68 (277)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHH
Confidence            356899999997  9999999999999999998  5             567777766654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=94.51  E-value=0.041  Score=55.80  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=33.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh-hHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~-~~~~l~~~  506 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+++ ..+.++++
T Consensus        46 ~gk~vlVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   91 (291)
T 3ijr_A           46 KGKNVLITGGDS--GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY   91 (291)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH
Confidence            356899999998  9999999999999999988  6554 34444433

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.51  E-value=0.019  Score=58.26  Aligned_cols=36  Identities=19%  Similarity=0.221  Sum_probs=29.7

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +-.++|+|+|++|  -||+++++.|.++|.+|..  |+.+
T Consensus        12 ~~~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   49 (335)
T 1rpn_A           12 SMTRSALVTGITG--QDGAYLAKLLLEKGYRVHGLVARRS   49 (335)
T ss_dssp             ---CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             ccCCeEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            3567899999999  9999999999999999988  5443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.45  E-value=0.038  Score=54.73  Aligned_cols=39  Identities=10%  Similarity=0.136  Sum_probs=33.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~  505 (639)
                      +|+|+|+||  -||+++++.|.++  |.+|..  |+.++.+.++.
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~   44 (287)
T 2jl1_A            2 SIAVTGATG--QLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD   44 (287)
T ss_dssp             CEEETTTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH
T ss_pred             eEEEEcCCc--hHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh
Confidence            589999999  9999999999988  988887  87777776654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=94.44  E-value=0.027  Score=56.08  Aligned_cols=37  Identities=5%  Similarity=0.029  Sum_probs=31.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKL  503 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l  503 (639)
                      +|+|+||||  .||+++++.|.++ |.+|..  |+.++.+.+
T Consensus         2 ~ilVtGatG--~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~   41 (289)
T 3e48_A            2 NIMLTGATG--HLGTHITNQAIANHIDHFHIGVRNVEKVPDD   41 (289)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHHTTCTTEEEEESSGGGSCGG
T ss_pred             EEEEEcCCc--hHHHHHHHHHhhCCCCcEEEEECCHHHHHHh
Confidence            589999999  9999999999987 888888  877765544

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=94.42  E-value=0.038  Score=55.78  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.+
T Consensus         8 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSR--GIGLAIAKRVAADGANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECChh
Confidence            356899999997  9999999999999999998  7766

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.39  E-value=0.021  Score=55.21  Aligned_cols=37  Identities=16%  Similarity=0.305  Sum_probs=31.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~  501 (639)
                      .+.|+|+|++|  -||+++|+.|.++|.  +|.+  |++++.+
T Consensus        18 ~~~vlVtGasg--~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~   58 (242)
T 2bka_A           18 NKSVFILGASG--ETGRVLLKEILEQGLFSKVTLIGRRKLTFD   58 (242)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEEEESSCCCCC
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHcCCCCCEEEEEEcCCCCcc
Confidence            35799999999  999999999999999  8888  7666554

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=94.36  E-value=0.011  Score=60.39  Aligned_cols=71  Identities=13%  Similarity=0.100  Sum_probs=44.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccC--cEEEecchhhHHHHHhhCCcccccceeeeccccccce-eEEEEcCcCChh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMG--IKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKT-KIWLVGDDLTGK  538 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~vwivg~~~~~~  538 (639)
                      ..++|+|+||||  -||+++++.|.++|  ++|+.++..+...-.+.           ...+. .+. ..++.||..+++
T Consensus        23 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~-----------l~~~~-~~~~~~~~~~Dl~d~~   88 (346)
T 4egb_A           23 NAMNILVTGGAG--FIGSNFVHYMLQSYETYKIINFDALTYSGNLNN-----------VKSIQ-DHPNYYFVKGEIQNGE   88 (346)
T ss_dssp             -CEEEEEETTTS--HHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGG-----------GTTTT-TCTTEEEEECCTTCHH
T ss_pred             CCCeEEEECCcc--HHHHHHHHHHHhhCCCcEEEEEeccccccchhh-----------hhhhc-cCCCeEEEEcCCCCHH
Confidence            346899999999  99999999999999  78777332211100000           00000 112 236788988888


Q ss_pred             hhhcCCCC
Q 006607          539 EQARAPKG  546 (639)
Q Consensus       539 ~q~~a~~G  546 (639)
                      +...+-+|
T Consensus        89 ~~~~~~~~   96 (346)
T 4egb_A           89 LLEHVIKE   96 (346)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            87665444

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=94.34  E-value=0.011  Score=61.60  Aligned_cols=108  Identities=11%  Similarity=0.021  Sum_probs=61.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh-----HHHHHhhCCcccccceeeeccccccce-eE-EEEcCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-----YEKLKLRIPVEAQHNLVLSTSYAAHKT-KI-WLVGDD  534 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~-----~~~l~~~~~~~~~~~l~~~~~~~~~~~-~v-wivg~~  534 (639)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.++     ++.+.++              .++... ++ ++.||.
T Consensus        29 k~vlVtGatG--~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~Dl   92 (381)
T 1n7h_A           29 KIALITGITG--QDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYID--------------PHNVNKALMKLHYADL   92 (381)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------------------CCEEEEECCT
T ss_pred             CeEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhc--------------cccccccceEEEECCC
Confidence            6899999999  9999999999999999988  55432     1111100              000011 23 677888


Q ss_pred             CChhhhhcCCCCceeecccccCCcCCCCCceeecCCccccC---CCCccccccccccCcchhhhHHHHH
Q 006607          535 LTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIP---PSLSNMHSCENWLGRRVMSAWRIAG  600 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P---~~~~~~~~~e~~~pr~~~~Ac~a~~  600 (639)
                      .++++...+-++.             +-|+.++..+....+   ++.+.+...|..-+..++.||...+
T Consensus        93 ~d~~~~~~~~~~~-------------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~  148 (381)
T 1n7h_A           93 TDASSLRRWIDVI-------------KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT  148 (381)
T ss_dssp             TCHHHHHHHHHHH-------------CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhc-------------CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8877765443331             446776665543321   1222122233444556666666544

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=94.34  E-value=0.05  Score=55.27  Aligned_cols=44  Identities=16%  Similarity=0.341  Sum_probs=36.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~------------~~~~~~l~~~~  507 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+            .++++++.+++
T Consensus        27 ~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (299)
T 3t7c_A           27 EGKVAFITGAAR--GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV   84 (299)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHH
Confidence            356899999997  9999999999999999998  54            66777766654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=94.29  E-value=0.036  Score=54.75  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.+++++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   43 (254)
T 1zmt_A            2 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEA   43 (254)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH
T ss_pred             eEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            4689999998  9999999999999999998  88887777654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=94.28  E-value=0.047  Score=54.69  Aligned_cols=36  Identities=17%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         5 ~~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~r~~~~   42 (274)
T 3e03_A            5 SGKTLFITGASR--GIGLAIALRAARDGANVAIAAKSAVA   42 (274)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred             CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeccchh
Confidence            456899999998  9999999999999999998  76654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.26  E-value=0.077  Score=54.90  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=57.9

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc
Q 006607          451 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  523 (639)
Q Consensus       451 taa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  523 (639)
                      |+..+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+.                     +++
T Consensus       143 Tp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~p~A~lL~~~gAtVtv~h~~t~~---------------------L~~  199 (285)
T 3p2o_A          143 TPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKTKD---------------------LSL  199 (285)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSC---------------------HHH
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCchh---------------------HHH
Confidence            5666655543     3578999999997  7999999999999999999  22211                     222


Q ss_pred             --cceeEEEE--c--CcCChhhhhcCCCCceeecccccCCc
Q 006607          524 --HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       524 --~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                        ++++|+|.  |  +.++++..   ++|+++||+. +++.
T Consensus       200 ~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  236 (285)
T 3p2o_A          200 YTRQADLIIVAAGCVNLLRSDMV---KEGVIVVDVG-INRL  236 (285)
T ss_dssp             HHTTCSEEEECSSCTTCBCGGGS---CTTEEEEECC-CEEC
T ss_pred             HhhcCCEEEECCCCCCcCCHHHc---CCCeEEEEec-cCcc
Confidence              46677663  3  24565544   9999999998 6654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.23  E-value=0.033  Score=57.22  Aligned_cols=33  Identities=15%  Similarity=0.071  Sum_probs=29.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      .++|+|+||||  .||+++++.|.++|.+|..  |+.
T Consensus        10 ~~~IlVtGatG--~iG~~l~~~L~~~g~~V~~l~R~~   44 (346)
T 3i6i_A           10 KGRVLIAGATG--FIGQFVATASLDAHRPTYILARPG   44 (346)
T ss_dssp             -CCEEEECTTS--HHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCeEEEECCCc--HHHHHHHHHHHHCCCCEEEEECCC
Confidence            45799999999  9999999999999998888  655

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=94.20  E-value=0.025  Score=56.75  Aligned_cols=40  Identities=15%  Similarity=0.258  Sum_probs=35.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |++++++++.
T Consensus        16 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~   57 (266)
T 3p19_A           16 KKLVVITGASS--GIGEAIARRFSEEGHPLLLLARRVERLKALN   57 (266)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCHHHHHTTC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHhh
Confidence            56899999998  9999999999999999999  8887776553

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.19  E-value=0.04  Score=53.11  Aligned_cols=41  Identities=12%  Similarity=0.118  Sum_probs=36.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~  506 (639)
                      +.|+++|++|  -||+++|+.|.++|  .+|.+  |+.++.+++++.
T Consensus         4 k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~   48 (250)
T 1yo6_A            4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI   48 (250)
T ss_dssp             SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC
T ss_pred             CEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc
Confidence            5799999998  99999999999999  89988  888888888654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=94.19  E-value=0.032  Score=54.75  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=35.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++++
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   47 (246)
T 2ag5_A            6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELE   47 (246)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGG
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            46799999998  9999999999999999998  8887777665

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=94.18  E-value=0.057  Score=54.86  Aligned_cols=44  Identities=16%  Similarity=0.293  Sum_probs=34.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+|+|++|+.-||+++|+.|+++|.+|.+  |+++..+.+++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~   74 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDP   74 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence            356899999985347999999999999999998  66654444433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=94.13  E-value=0.043  Score=56.84  Aligned_cols=43  Identities=16%  Similarity=0.181  Sum_probs=36.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe-------cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-------ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-------~~~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|..       |++++.+++++++
T Consensus         5 ~k~vlVTGas~--GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~   54 (324)
T 3u9l_A            5 KKIILITGASS--GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFA   54 (324)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHH
Confidence            35799999998  9999999999999999984       4567778777664

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=94.08  E-value=0.048  Score=56.06  Aligned_cols=45  Identities=18%  Similarity=0.188  Sum_probs=37.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc----------hhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~----------~~~~~~l~~~~~  508 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+          .++.+++.+++.
T Consensus        26 ~gk~vlVTGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~   82 (322)
T 3qlj_A           26 DGRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT   82 (322)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHH
Confidence            356799999997  9999999999999999998  55          677777777653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.05  E-value=0.082  Score=55.75  Aligned_cols=88  Identities=14%  Similarity=0.205  Sum_probs=62.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--cccc--cceeEEE--EcC--
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWL--VGD--  533 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~~--~~~~vwi--vg~--  533 (639)
                      ++|+++|+ |  -+|+++++.|.+.|.+|++  |+.++.+.+++......  ..+...  ++.+  +.++++|  +|-  
T Consensus       168 ~~VlViGa-G--gvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          168 GKVVILGG-G--VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRV--ELLYSNSAEIETAVAEADLLIGAVLVPG  242 (361)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGS--EEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCcee--EeeeCCHHHHHHHHcCCCEEEECCCcCC
Confidence            78999999 8  9999999999999999888  88899988876532211  001111  2332  5667777  321  


Q ss_pred             c-----CChhhhhcCCCCceeecccccCC
Q 006607          534 D-----LTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       534 ~-----~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      .     ++++....+++|.++++++ .++
T Consensus       243 ~~~~~li~~~~~~~~~~g~~ivdv~-~~~  270 (361)
T 1pjc_A          243 RRAPILVPASLVEQMRTGSVIVDVA-VDQ  270 (361)
T ss_dssp             SSCCCCBCHHHHTTSCTTCEEEETT-CTT
T ss_pred             CCCCeecCHHHHhhCCCCCEEEEEe-cCC
Confidence            1     3566677889999999998 444

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.02  E-value=0.045  Score=54.80  Aligned_cols=36  Identities=22%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDY  500 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~  500 (639)
                      .+.|+|+||||  .||+++++.|.++| .+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~R~~~~~   43 (299)
T 2wm3_A            5 KKLVVVFGGTG--AQGGSVARTLLEDGTFKVRVVTRNPRKK   43 (299)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHCSSEEEEEESCTTSH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhcCCceEEEEEcCCCCH
Confidence            36799999999  99999999999988 88877  766543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=93.98  E-value=0.089  Score=52.11  Aligned_cols=43  Identities=26%  Similarity=0.324  Sum_probs=34.4

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006607          463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~  507 (639)
                      .+.|+++|++  |  -||+++|+.|+++|.+|.+  |+++   ..++++++.
T Consensus         8 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   57 (261)
T 2wyu_A            8 GKKALVMGVTNQR--SLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL   57 (261)
T ss_dssp             TCEEEEESCCSSS--SHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999988  6654   455555443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=93.97  E-value=0.058  Score=54.14  Aligned_cols=46  Identities=22%  Similarity=0.382  Sum_probs=37.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch--hhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~--~~~~~l~~~~~  508 (639)
                      .+.|+++|++|++-||+++|+.|+++|.+|.+  |++  +..++++++.+
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~   75 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN   75 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC
Confidence            56899999996224999999999999999998  665  67777766643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=93.94  E-value=0.049  Score=55.40  Aligned_cols=38  Identities=16%  Similarity=0.170  Sum_probs=31.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      +.|+|+|++|  -||+++++.|.++|.+|..  |+.+..+++
T Consensus         6 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~   45 (337)
T 2c29_D            6 ETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPTNVKKV   45 (337)
T ss_dssp             CEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCTTCHHHH
T ss_pred             CEEEEECCch--HHHHHHHHHHHHCCCEEEEEECCcchhHHH
Confidence            5799999999  9999999999999999975  776644433

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.94  E-value=0.053  Score=53.58  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=36.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++ +++.+++.
T Consensus         6 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~   50 (256)
T 2d1y_A            6 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG   50 (256)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh
Confidence            46799999998  9999999999999999988  77777 77766653

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=93.92  E-value=0.06  Score=53.10  Aligned_cols=39  Identities=13%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~  505 (639)
                      +|+|+||||  -||+++++.|.++  |.+|..  |+.++.+.+++
T Consensus         1 ~ilVtGatG--~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~   43 (286)
T 2zcu_A            1 MIAITGATG--QLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA   43 (286)
T ss_dssp             CEEEESTTS--HHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH
T ss_pred             CEEEEcCCc--hHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc
Confidence            489999999  9999999999988  988887  77777766654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=93.91  E-value=0.025  Score=57.47  Aligned_cols=38  Identities=26%  Similarity=0.215  Sum_probs=30.7

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      |+..+.|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus         6 ~~~~~~vlVTGatG--fIG~~l~~~Ll~~G~~V~~~~r~~~~   45 (338)
T 2rh8_A            6 PIGKKTACVVGGTG--FVASLLVKLLLQKGYAVNTTVRDPDN   45 (338)
T ss_dssp             ---CCEEEEECTTS--HHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCcch
Confidence            44457899999999  9999999999999999875  66553

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=93.91  E-value=0.062  Score=55.23  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=35.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc------------hhhHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC------------KDDYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~------------~~~~~~l~~~~  507 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  ++            +++++++.+++
T Consensus        45 ~gk~~lVTGas~--GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (317)
T 3oec_A           45 QGKVAFITGAAR--GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV  102 (317)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHH
Confidence            356899999998  9999999999999999998  43            56666665543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=93.91  E-value=0.15  Score=53.73  Aligned_cols=67  Identities=16%  Similarity=0.263  Sum_probs=46.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc----cccceeeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ...+|.++|| |  .||+++|..|+.+|.  .+.|  .++++.+....++...    ....++..+++++ ++++++|+
T Consensus        18 ~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi   93 (331)
T 4aj2_A           18 PQNKITVVGV-G--AVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVII   93 (331)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEE
Confidence            4568999998 7  999999999998887  7777  6777777644443321    1112222335777 99999876

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=93.90  E-value=0.067  Score=53.64  Aligned_cols=44  Identities=20%  Similarity=0.210  Sum_probs=34.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh-hHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~-~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.+ ..+++++++
T Consensus        28 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   74 (283)
T 1g0o_A           28 EGKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI   74 (283)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH
Confidence            356899999998  9999999999999999988  6554 345554443

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=93.89  E-value=0.056  Score=56.69  Aligned_cols=36  Identities=14%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        44 ~gk~vlVTGas~--GIG~aia~~La~~Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           44 AGCTVFITGASR--GIGKAIALKAAKDGANIVIAAKTAQP   81 (346)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred             CCCEEEEeCCCh--HHHHHHHHHHHHCCCEEEEEECChhh
Confidence            457899999998  9999999999999999999  76664

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=93.89  E-value=0.13  Score=53.12  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=56.9

Q ss_pred             HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc
Q 006607          451 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  523 (639)
Q Consensus       451 taa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  523 (639)
                      |+..+++-+     +-.-++|+++|+.+  -+|+.+|+.|.++|..|++  ++.+.                     +++
T Consensus       144 Tp~gv~~lL~~~~i~l~Gk~vvVvGrs~--iVG~plA~lL~~~gAtVtv~hs~T~~---------------------L~~  200 (286)
T 4a5o_A          144 TPKGIMTLLASTGADLYGMDAVVVGASN--IVGRPMALELLLGGCTVTVTHRFTRD---------------------LAD  200 (286)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECTTS--TTHHHHHHHHHHTTCEEEEECTTCSC---------------------HHH
T ss_pred             CHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCCcC---------------------HHH
Confidence            455555444     33578999999997  8999999999999999999  22221                     221


Q ss_pred             --cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc
Q 006607          524 --HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       524 --~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                        ++++++|  +|  +.++++..   ++|+++||+. +++.
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (286)
T 4a5o_A          201 HVSRADLVVVAAGKPGLVKGEWI---KEGAIVIDVG-INRQ  237 (286)
T ss_dssp             HHHTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-SCSS
T ss_pred             HhccCCEEEECCCCCCCCCHHHc---CCCeEEEEec-cccc
Confidence              3566666  33  24555544   9999999999 6654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=93.88  E-value=0.052  Score=55.11  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=35.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~~  506 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+  +++.++++++
T Consensus        48 ~~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~   94 (294)
T 3r3s_A           48 KDRKALVTGGDS--GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL   94 (294)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHH
Confidence            357899999998  9999999999999999988  43  3456666554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=93.88  E-value=0.052  Score=53.50  Aligned_cols=34  Identities=15%  Similarity=0.304  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         4 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   39 (255)
T 2q2v_A            4 GKTALVTGSTS--GIGLGIAQVLARAGANIVLNGFGDP   39 (255)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCch
Confidence            36799999998  9999999999999999998  5554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=93.84  E-value=0.051  Score=51.13  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=35.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      +.|+++|++|  -||+++|+.|+++  +|.+  |++++.++++++++
T Consensus         1 k~vlVtGasg--~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~   43 (207)
T 2yut_A            1 MRVLITGATG--GLGGAFARALKGH--DLLLSGRRAGALAELAREVG   43 (207)
T ss_dssp             CEEEEETTTS--HHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT
T ss_pred             CEEEEEcCCc--HHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc
Confidence            4689999998  9999999999988  7777  88888888877654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.70  E-value=0.093  Score=52.93  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=55.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc--CcCCh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG--DDLTG  537 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg--~~~~~  537 (639)
                      .+|.++|+||  .+|+++|+.|.+.|.+|++  |++++.+++++. +       +..++.++  ++++++|+-  .....
T Consensus        12 m~I~iIG~tG--~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g-------~~~~~~~~~~~~aDvVi~av~~~~~~   81 (286)
T 3c24_A           12 KTVAILGAGG--KMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-G-------IPLTDGDGWIDEADVVVLALPDNIIE   81 (286)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-T-------CCCCCSSGGGGTCSEEEECSCHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-C-------CCcCCHHHHhcCCCEEEEcCCchHHH
Confidence            4799999998  9999999999999999988  888888888762 1       11233332  667776631  10000


Q ss_pred             ---hhh-hcCCCCceeecccc
Q 006607          538 ---KEQ-ARAPKGTIFIPYTQ  554 (639)
Q Consensus       538 ---~~q-~~a~~G~~f~~~~~  554 (639)
                         ++. ..+++|+++++.|-
T Consensus        82 ~v~~~l~~~l~~~~ivv~~s~  102 (286)
T 3c24_A           82 KVAEDIVPRVRPGTIVLILDA  102 (286)
T ss_dssp             HHHHHHGGGSCTTCEEEESCS
T ss_pred             HHHHHHHHhCCCCCEEEECCC
Confidence               122 23578999998776

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=93.69  E-value=0.091  Score=54.36  Aligned_cols=82  Identities=20%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             hHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607          450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  522 (639)
Q Consensus       450 ltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  522 (639)
                      -|++.+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     +++
T Consensus       143 cTp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~  199 (285)
T 3l07_A          143 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFTT---------------------DLK  199 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SHH
T ss_pred             CCHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            35556655443     3578999999997  7999999999999999999  2211                     122


Q ss_pred             c--cceeEEEE--c--CcCChhhhhcCCCCceeecccccCCc
Q 006607          523 A--HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       523 ~--~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      +  ++++++|.  |  +.++++..   ++|+++||+. +++.
T Consensus       200 ~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDvg-i~~~  237 (285)
T 3l07_A          200 SHTTKADILIVAVGKPNFITADMV---KEGAVVIDVG-INHV  237 (285)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CEEE
T ss_pred             HhcccCCEEEECCCCCCCCCHHHc---CCCcEEEEec-ccCc
Confidence            2  46677663  3  34566544   9999999999 6664

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=93.68  E-value=0.12  Score=52.80  Aligned_cols=103  Identities=14%  Similarity=0.062  Sum_probs=68.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc-
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD-  534 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~-  534 (639)
                      ...+|.++|. |  .+|+++|+.|++.|.+|++  |++++.+++++.-.     . ...++.++  ++++++|  +.+. 
T Consensus         6 ~~~~I~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~-----~-~~~~~~~e~~~~aDvvi~~vp~~~   76 (303)
T 3g0o_A            6 TDFHVGIVGL-G--SMGMGAARSCLRAGLSTWGADLNPQACANLLAEGA-----C-GAAASAREFAGVVDALVILVVNAA   76 (303)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-----S-EEESSSTTTTTTCSEEEECCSSHH
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC-----c-cccCCHHHHHhcCCEEEEECCCHH
Confidence            3468999996 4  9999999999999999999  88899998876510     0 11345553  6777765  2221 


Q ss_pred             -CCh-----hh-hhcCCCCceeecccccCCc---C----C-CCCceeecCCccc
Q 006607          535 -LTG-----KE-QARAPKGTIFIPYTQIPPR---K----L-RKDCFYHSTPAMI  573 (639)
Q Consensus       535 -~~~-----~~-q~~a~~G~~f~~~~~~~~~---~----~-R~dc~y~~~~a~~  573 (639)
                       ++.     ++ ...+++|+++++.|.++|.   +    + ++.+.|...|.+.
T Consensus        77 ~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  130 (303)
T 3g0o_A           77 QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSG  130 (303)
T ss_dssp             HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred             HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCC
Confidence             111     11 1246799999999987775   1    1 1456666666543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=93.67  E-value=0.066  Score=54.24  Aligned_cols=38  Identities=11%  Similarity=0.151  Sum_probs=32.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      .+|+|+|++|  -||+++++.|.++|.+|..  |+.++.+++
T Consensus        14 M~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l   53 (342)
T 2x4g_A           14 VKYAVLGATG--LLGHHAARAIRAAGHDLVLIHRPSSQIQRL   53 (342)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEEECTTSCGGGG
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecChHhhhhh
Confidence            3799999999  9999999999999999988  666555433

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.67  E-value=0.033  Score=56.34  Aligned_cols=57  Identities=21%  Similarity=0.243  Sum_probs=42.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL  530 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi  530 (639)
                      +|+++|+ |  ..|+|++..|.+.|. +|++  |+.++.++|+++....      ...++++  ++++++|
T Consensus       110 ~vliiGa-G--g~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~------~~~~~~~~~~~aDiVI  171 (253)
T 3u62_A          110 PVVVVGA-G--GAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIF------SLDQLDEVVKKAKSLF  171 (253)
T ss_dssp             SEEEECC-S--HHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEE------EGGGHHHHHHTCSEEE
T ss_pred             eEEEECc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccC------CHHHHHhhhcCCCEEE
Confidence            8999998 5  799999999999998 7887  8888888777664321      1223332  5677777

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=93.64  E-value=0.14  Score=53.21  Aligned_cols=136  Identities=13%  Similarity=0.040  Sum_probs=83.5

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++-.  ..    |-.|. .+--+|+ +.-.-+.||+.+|+       |+..+-+ +++.++|.++|+-   .+|+
T Consensus        65 ~g~K~~~~~--p~----n~~~~-v~L~d~~tG~p~a~ld~~~lT~~RTaA~s~laa~~La~~~~~~v~iIGaG---~~a~  134 (313)
T 3hdj_A           65 AGAKVYTTI--KG----QFQFV-ILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFGAG---TQGA  134 (313)
T ss_dssp             EEEEEEEEE--TT----EEEEE-EEEEETTTCCEEEEECSHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             eEEEEeecC--CC----CceEE-EEEEECCCCCEEEEEcCchhhhHHHHHHHHHHHHhhccCCCcEEEEECcc---HHHH
Confidence            477776632  11    22333 4444443 45588999999985       3333333 6688899999965   9999


Q ss_pred             HHHHHHhc--cCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----cC-cCChhhhhcCCCCceee
Q 006607          480 AVASSLCQ--MGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----GD-DLTGKEQARAPKGTIFI  550 (639)
Q Consensus       480 ava~~L~~--~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g~-~~~~~~q~~a~~G~~f~  550 (639)
                      ..+++|++  ...+|.+.|+.+-+++.+++..+.+...... ++++  ++++|++.    ++ .++.   .+.+||++++
T Consensus       135 ~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~pvl~~---~~l~~G~~V~  210 (313)
T 3hdj_A          135 EHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTTPLFAG---QALRAGAFVG  210 (313)
T ss_dssp             HHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSSCSSCG---GGCCTTCEEE
T ss_pred             HHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCCcccCH---HHcCCCcEEE
Confidence            99999984  3456777222277777766544333221122 5554  77888772    22 2232   3568999999


Q ss_pred             cccccCCc
Q 006607          551 PYTQIPPR  558 (639)
Q Consensus       551 ~~~~~~~~  558 (639)
                      ++.-..|.
T Consensus       211 ~vGs~~p~  218 (313)
T 3hdj_A          211 AIGSSLPH  218 (313)
T ss_dssp             ECCCSSTT
T ss_pred             ECCCCCCc
Confidence            98755443

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=93.64  E-value=0.039  Score=56.66  Aligned_cols=102  Identities=18%  Similarity=0.103  Sum_probs=69.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec----
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG----  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg----  532 (639)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++ +.      ...++.++  ++++++|  +.    
T Consensus         9 ~~~IgiIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~------~~~~~~~e~~~~aDvVi~~vp~~~~   78 (306)
T 3l6d_A            9 EFDVSVIGL-G--AMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GA------HLCESVKAALSASPATIFVLLDNHA   78 (306)
T ss_dssp             SCSEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TC------EECSSHHHHHHHSSEEEECCSSHHH
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CC------eecCCHHHHHhcCCEEEEEeCCHHH
Confidence            457999996 5  9999999999999999999  888999888765 11      11334443  5666655  21    


Q ss_pred             --CcCChhhhhcCCCCceeecccccCCc---C----CC-CCceeecCCcccc
Q 006607          533 --DDLTGKEQARAPKGTIFIPYTQIPPR---K----LR-KDCFYHSTPAMII  574 (639)
Q Consensus       533 --~~~~~~~q~~a~~G~~f~~~~~~~~~---~----~R-~dc~y~~~~a~~~  574 (639)
                        +.+.+++...+++|+++++.+.++|.   +    ++ +.+.|.+.|.+--
T Consensus        79 ~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~  130 (306)
T 3l6d_A           79 THEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAY  130 (306)
T ss_dssp             HHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred             HHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccC
Confidence              12221133445899999999998887   1    12 4667777766543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=93.61  E-value=0.061  Score=48.07  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=35.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .++|+++|+ |  .+|+++|+.|.++|.+|++  +++++.++++++
T Consensus         6 ~~~v~I~G~-G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~   48 (141)
T 3llv_A            6 RYEYIVIGS-E--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE   48 (141)
T ss_dssp             CCSEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC
Confidence            357999998 6  9999999999999999999  888888888754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=93.58  E-value=0.081  Score=56.71  Aligned_cols=89  Identities=17%  Similarity=0.187  Sum_probs=59.2

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  532 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  532 (639)
                      ...++|.++|+ |  .+|+++|+.|...|. +|++  |+.++.+++.++++.+.    +...++.+  +.++++|  +| 
T Consensus       165 l~g~~VlIiGa-G--~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~----~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-H--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce----ecHHhHHHHhcCCCEEEEccCC
Confidence            35678999998 7  999999999999998 8888  88888877777654321    11223332  5667766  22 


Q ss_pred             -Cc-CChhhhhc-C-----CCCceeecccccCC
Q 006607          533 -DD-LTGKEQAR-A-----PKGTIFIPYTQIPP  557 (639)
Q Consensus       533 -~~-~~~~~q~~-a-----~~G~~f~~~~~~~~  557 (639)
                       .. ++.+.... +     .++.++++.+ .|+
T Consensus       238 ~~~~~~~~~l~~~~lk~r~~~~~v~vdia-~P~  269 (404)
T 1gpj_A          238 PHPVIHVDDVREALRKRDRRSPILIIDIA-NPR  269 (404)
T ss_dssp             SSCCBCHHHHHHHHHHCSSCCCEEEEECC-SSC
T ss_pred             CCceecHHHHHHHHHhccCCCCEEEEEcc-CCC
Confidence             22 23344433 2     4678888887 444

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=93.53  E-value=0.052  Score=58.61  Aligned_cols=126  Identities=14%  Similarity=0.191  Sum_probs=81.8

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc------h-hhHHHHHhhCCcccccce
Q 006607          451 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC------K-DDYEKLKLRIPVEAQHNL  515 (639)
Q Consensus       451 taa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~------~-~~~~~l~~~~~~~~~~~l  515 (639)
                      +.|.++|+.+     -...+|++.||-   ..|.+||+.|...|. +|.|  ++      + +++..+|++........ 
T Consensus       171 ~lAall~al~l~g~~l~d~kVVi~GAG---aAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~-  246 (398)
T 2a9f_A          171 VLAAIFNSLKLLKKSLDEVSIVVNGGG---SAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE-  246 (398)
T ss_dssp             HHHHHHHHHHTTTCCTTSCEEEEECCS---HHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCT-
T ss_pred             HHHHHHHHHHHhCCCCCccEEEEECCC---HHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcc-
Confidence            3445555443     357799999998   899999999999999 8888  22      1 33665665544332111 


Q ss_pred             eeeccccc--cceeEEE---EcCcCChhhhhcCCCCceeecccc----cCCc---CCCCCceeecCCccccCCCCcccc
Q 006607          516 VLSTSYAA--HKTKIWL---VGDDLTGKEQARAPKGTIFIPYTQ----IPPR---KLRKDCFYHSTPAMIIPPSLSNMH  582 (639)
Q Consensus       516 ~~~~~~~~--~~~~vwi---vg~~~~~~~q~~a~~G~~f~~~~~----~~~~---~~R~dc~y~~~~a~~~P~~~~~~~  582 (639)
                      -...++++  +.+++.|   .+..+|+|..++|.+|.+..|.|.    ..|+   +. ..|.+.++ -...|+..+|+.
T Consensus       247 ~~~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~~~-g~~i~atG-rs~~p~Q~NN~~  323 (398)
T 2a9f_A          247 FKSGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEALEA-GAYIVGTG-RSDFPNQINNVL  323 (398)
T ss_dssp             TCCCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHHTT-TCSEEEES-CTTSSSBCCGGG
T ss_pred             cchhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHHHh-CCeEEEeC-CCCCCCcCCcee
Confidence            01234664  6677776   568899999999999999999996    3333   23 23666555 345666666664

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=93.53  E-value=0.067  Score=52.80  Aligned_cols=38  Identities=24%  Similarity=0.243  Sum_probs=32.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+++..+
T Consensus        18 ~~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~   57 (249)
T 1o5i_A           18 RDKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLK   57 (249)
T ss_dssp             TTCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            467899999998  9999999999999999998  6664444

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=93.52  E-value=0.14  Score=53.44  Aligned_cols=83  Identities=17%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             hhHHHHHHhcCcC-----CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccc
Q 006607          449 SLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       449 sltaa~v~~~i~~-----~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      .-|+..+++-+..     ..++|+|+|+.+  -||+-+|+.|.++|-.|++  ++.+                     ++
T Consensus       146 PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L  202 (301)
T 1a4i_A          146 PCTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHSKTA---------------------HL  202 (301)
T ss_dssp             CHHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------SH
T ss_pred             CchHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEECCcc---------------------cH
Confidence            3478777776543     578999999996  7999999999999999999  2111                     13


Q ss_pred             cc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc
Q 006607          522 AA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       522 ~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      ++  ++++++|  +|  +.++++..   ++|+++||++ +++.
T Consensus       203 ~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~~~  241 (301)
T 1a4i_A          203 DEEVNKGDILVVATGQPEMVKGEWI---KPGAIVIDCG-INYV  241 (301)
T ss_dssp             HHHHTTCSEEEECCCCTTCBCGGGS---CTTCEEEECC-CBC-
T ss_pred             HHHhccCCEEEECCCCcccCCHHHc---CCCcEEEEcc-CCCc
Confidence            22  4666666  22  24555554   8999999999 7653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=93.44  E-value=0.087  Score=51.81  Aligned_cols=45  Identities=18%  Similarity=0.288  Sum_probs=35.1

Q ss_pred             CCCcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhhC
Q 006607          461 KTTAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRI  507 (639)
Q Consensus       461 ~~~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~~  507 (639)
                      ...+.|+++|++  |  -||+++|+.|+++|.+|.+  |+.   ++.+++.++.
T Consensus        12 ~~~k~vlITGa~~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~   63 (271)
T 3ek2_A           12 LDGKRILLTGLLSNR--SIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF   63 (271)
T ss_dssp             TTTCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCCCC--cHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc
Confidence            367899999998  6  8999999999999999998  553   3444444443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=93.42  E-value=0.21  Score=51.30  Aligned_cols=97  Identities=11%  Similarity=0.048  Sum_probs=59.8

Q ss_pred             HcCCcEEEecccccccccccCCceeeecCCCCcc-ee----eecCChhHHHHHH-hcC-cCCCcEEEEecccCchhhHHH
Q 006607          408 AKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK-IK----VVDGSSLAAAVVV-NSL-PKTTAHVLLRGTVTANKVANA  480 (639)
Q Consensus       408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~~L~-ir----vv~Gnsltaa~v~-~~i-~~~~~~V~~~Gatg~~kig~a  480 (639)
                      |-|=+|++.|++.+-  +.-... .+.+-|+++. ..    ...-+-.||.-.+ +.. .+..+.|+++|++|  -||.+
T Consensus        91 ~vGdrV~~~G~~aey--~~v~~~-~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g--~iG~~  165 (336)
T 4b7c_A           91 QAGDYVNGALGVQDY--FIGEPK-GFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG--AVGSV  165 (336)
T ss_dssp             CTTCEEEEECCSBSE--EEECCT-TCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTS--HHHHH
T ss_pred             CCCCEEeccCCceEE--EEechH-HeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHH
Confidence            346677777877651  111122 2334443231 11    1111124444444 222 23567899999998  99999


Q ss_pred             HHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          481 VASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       481 va~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +++.+...|.+|..  +++++.+.++++++.
T Consensus       166 ~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~  196 (336)
T 4b7c_A          166 AGQIARLKGCRVVGIAGGAEKCRFLVEELGF  196 (336)
T ss_dssp             HHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            99999999999988  889999988666554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=93.35  E-value=0.06  Score=52.95  Aligned_cols=40  Identities=13%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~---~~v~~--~~~~~~~~l~  504 (639)
                      .+.|+++|++|  -||+++|+.|.++|   .+|.+  |+.++.+.++
T Consensus        21 ~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~   65 (267)
T 1sny_A           21 MNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE   65 (267)
T ss_dssp             CSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred             CCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH
Confidence            46899999998  99999999999999   89988  7777665553

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=93.33  E-value=0.065  Score=56.83  Aligned_cols=83  Identities=10%  Similarity=0.093  Sum_probs=58.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  |+....+..++. +..      .+.++++  ++++++++      
T Consensus       163 ~gktvGIIG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~------~~~~l~ell~~aDvV~l~~Plt~  232 (351)
T 3jtm_A          163 EGKTIGTVGAG---RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET-GAK------FVEDLNEMLPKCDVIVINMPLTE  232 (351)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH-CCE------ECSCHHHHGGGCSEEEECSCCCT
T ss_pred             cCCEEeEEEeC---HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC-CCe------EcCCHHHHHhcCCEEEECCCCCH
Confidence            46789999975   9999999999999999988  443333332221 111      1334554  66777552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                        -..++.+....+++|+++|..+|
T Consensus       233 ~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          233 KTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHHhhcHHHHhcCCCCCEEEECcC
Confidence              12567888899999999999998

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=93.29  E-value=0.079  Score=51.92  Aligned_cols=42  Identities=14%  Similarity=0.100  Sum_probs=36.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~~~~  507 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+     |++++.+++++++
T Consensus         2 k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            2 VIALVTHARH--FAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh
Confidence            5789999998  9999999999999999986     4567788887776

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=93.29  E-value=0.062  Score=53.99  Aligned_cols=32  Identities=22%  Similarity=0.182  Sum_probs=28.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--c-ch
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CK  497 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~  497 (639)
                      +.|+|+||+|  -||+++++.|.++|.+|..  | +.
T Consensus         2 k~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            2 GRVCVTGGTG--FLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CEEEEESTTS--HHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CEEEEECChh--HHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            5799999999  9999999999999999986  5 54

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=93.27  E-value=0.042  Score=54.26  Aligned_cols=33  Identities=21%  Similarity=0.265  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~   51 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAI   51 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEE
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence            467899999992128999999999999999988

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=93.27  E-value=0.11  Score=55.23  Aligned_cols=144  Identities=16%  Similarity=0.199  Sum_probs=82.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc---cceeEEE---EcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL---VGD  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi---vg~  533 (639)
                      .-++|.+.|. |  .||+.+|+.|.+.|-+|++  .+.++ ++..++.+.+.      + +.++   .+|+|.+   .+.
T Consensus       174 ~GktV~I~G~-G--nVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~------v-~~~ell~~~~DIliP~A~~~  242 (355)
T 1c1d_A          174 DGLTVLVQGL-G--AVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTA------V-ALEDVLSTPCDVFAPCAMGG  242 (355)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE------C-CGGGGGGCCCSEEEECSCSC
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEE------e-ChHHhhcCccceecHhHHHh
Confidence            4579999997 4  9999999999999999999  44444 44444432211      1 1122   3667766   455


Q ss_pred             cCChhhhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH-H-hc--CCC
Q 006607          534 DLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-A-LE--GWD  609 (639)
Q Consensus       534 ~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~-a-lE--gw~  609 (639)
                      .|+.++...++ ...++--++-|...-.-+=...+.+.+-+|+-                 ++-|+|++- + +|  +|+
T Consensus       243 ~I~~~~~~~lk-~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~-----------------~aNaGGV~~s~~~E~~~w~  304 (355)
T 1c1d_A          243 VITTEVARTLD-CSVVAGAANNVIADEAASDILHARGILYAPDF-----------------VANAGGAIHLVGREVLGWS  304 (355)
T ss_dssp             CBCHHHHHHCC-CSEECCSCTTCBCSHHHHHHHHHTTCEECCHH-----------------HHTTHHHHHHHHHHTTCCC
T ss_pred             hcCHHHHhhCC-CCEEEECCCCCCCCHHHHHHHHhCCEEEECCe-----------------EEcCCCeeeeeeehhcCCC
Confidence            66776665553 33444433211100000000112222223322                 245677764 3 55  898


Q ss_pred             CCccch-h---hhhHHHHHHHHHhcCCcc
Q 006607          610 LNECGQ-T---MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       610 ~~e~G~-i---v~~i~~iw~aa~kHGF~p  634 (639)
                      +.|+-+ +   ++..++|++.|.++|-.|
T Consensus       305 ~e~v~~~l~~i~~~~~~i~~~~~~~~~~~  333 (355)
T 1c1d_A          305 ESVVHERAVAIGDTLNQVFEISDNDGVTP  333 (355)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            887665 3   456679999999998644

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=93.27  E-value=0.14  Score=52.91  Aligned_cols=133  Identities=22%  Similarity=0.236  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHcCCcEEEecc---------cccccccccCC---ceeeec-CCCCcce----------eeecCC-------
Q 006607          399 IEEAILEADAKGVKVISLGL---------LNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS-------  448 (639)
Q Consensus       399 I~~Ai~~A~~~G~kv~~LG~---------ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gn-------  448 (639)
                      +..-.+.|++.|++..-.=+         ++..++||.|-   ++.++. -|++++.          |=|||=       
T Consensus        50 v~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~  129 (281)
T 2c2x_A           50 VRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGR  129 (281)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHH
Confidence            45556678888888765422         23346678773   434432 1333331          123332       


Q ss_pred             ---------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCCcc
Q 006607          449 ---------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       449 ---------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                               .-|+..+++-+.     -..++|+++|+..  -||+-+|+.|.++  |-.|++  ++.+            
T Consensus       130 l~~g~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~--iVG~p~A~lL~~~g~~atVtv~h~~t~------------  195 (281)
T 2c2x_A          130 LVLGTPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGV--TVGRPLGLLLTRRSENATVTLCHTGTR------------  195 (281)
T ss_dssp             HHHTCCCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHTSTTTCCEEEEECTTCS------------
T ss_pred             HhCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEECCCc--HHHHHHHHHHhcCCCCCEEEEEECchh------------
Confidence                     236666655543     3578999999985  6799999999999  899999  2221            


Q ss_pred             cccceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc
Q 006607          511 AQHNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       511 ~~~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                               ++++  ++++++|  +|  +.++++..   ++|+++||++ +|+.
T Consensus       196 ---------~L~~~~~~ADIVI~Avg~p~~I~~~~v---k~GavVIDVg-i~r~  236 (281)
T 2c2x_A          196 ---------DLPALTRQADIVVAAVGVAHLLTADMV---RPGAAVIDVG-VSRT  236 (281)
T ss_dssp             ---------CHHHHHTTCSEEEECSCCTTCBCGGGS---CTTCEEEECC-EEEE
T ss_pred             ---------HHHHHHhhCCEEEECCCCCcccCHHHc---CCCcEEEEcc-CCCC
Confidence                     1222  4566766  22  24566554   8999999999 7763

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=93.24  E-value=0.13  Score=53.52  Aligned_cols=84  Identities=17%  Similarity=0.170  Sum_probs=56.8

Q ss_pred             HHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc
Q 006607          451 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA  523 (639)
Q Consensus       451 taa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~  523 (639)
                      |+..+++-+.     -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++...++ +++.            .    
T Consensus       148 Tp~gv~~lL~~~~i~l~Gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~~~~T~~l~-l~~~------------~----  208 (300)
T 4a26_A          148 TAKGVIVLLKRCGIEMAGKRAVVLGRSN--IVGAPVAALLMKENATVTIVHSGTSTED-MIDY------------L----  208 (300)
T ss_dssp             HHHHHHHHHHHHTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTSCHHH-HHHH------------H----
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCCCCch-hhhh------------h----
Confidence            5566665443     3678999999997  7999999999999999999  3232222 0000            0    


Q ss_pred             cceeEEEE--c--CcCChhhhhcCCCCceeecccccCC
Q 006607          524 HKTKIWLV--G--DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       524 ~~~~vwiv--g--~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ++++|+|.  |  +.++++.   .++|+++||++ +++
T Consensus       209 ~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvg-i~~  242 (300)
T 4a26_A          209 RTADIVIAAMGQPGYVKGEW---IKEGAAVVDVG-TTP  242 (300)
T ss_dssp             HTCSEEEECSCCTTCBCGGG---SCTTCEEEECC-CEE
T ss_pred             ccCCEEEECCCCCCCCcHHh---cCCCcEEEEEe-ccC
Confidence            35566662  2  3455544   49999999998 554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=93.22  E-value=0.068  Score=54.56  Aligned_cols=119  Identities=16%  Similarity=0.135  Sum_probs=71.6

Q ss_pred             ecCChhHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccc
Q 006607          445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       445 v~Gnsltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      |||.....+..-..+. ..++|+|.|+-   ..|++++.+|.+.|+ +|++  |+.+|.++|.++++.+...      .+
T Consensus       102 TD~~G~~~~l~~~~~~-~~~~vlvlGaG---gaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~------~~  171 (271)
T 1npy_A          102 TDYIAIVKLIEKYHLN-KNAKVIVHGSG---GMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN------SL  171 (271)
T ss_dssp             HHHHHHHHHHHHTTCC-TTSCEEEECSS---TTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES------CC
T ss_pred             CCHHHHHHHHHHhCCC-CCCEEEEECCc---HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccch------hh
Confidence            5666666665433444 34789999987   579999999999997 6888  8889999998775432110      11


Q ss_pred             cccceeEEE----EcCcC------ChhhhhcCCCCceeecccccCCc--CC----C-CCceeecCCcccc
Q 006607          522 AAHKTKIWL----VGDDL------TGKEQARAPKGTIFIPYTQIPPR--KL----R-KDCFYHSTPAMII  574 (639)
Q Consensus       522 ~~~~~~vwi----vg~~~------~~~~q~~a~~G~~f~~~~~~~~~--~~----R-~dc~y~~~~a~~~  574 (639)
                      +..+++++|    +|..-      .+-+....++|.+++|.+ -.|.  .+    | +-|.+..+..|-+
T Consensus       172 ~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv-Y~P~~T~ll~~A~~~G~~~i~Gl~MLv  240 (271)
T 1npy_A          172 ENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV-AMPVETPFIRYAQARGKQTISGAAVIV  240 (271)
T ss_dssp             TTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC-CSSSSCHHHHHHHHTTCEEECHHHHHH
T ss_pred             hcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEee-cCCCCCHHHHHHHHCCCEEECCHHHHH
Confidence            113456666    22210      010111235678888887 4343  11    2 4566666666643

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=93.16  E-value=0.12  Score=54.32  Aligned_cols=67  Identities=16%  Similarity=0.228  Sum_probs=46.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc----cccceeeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE----AQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ...+|.++|+ |  .||+++|..|+++|.  .+.+  .++++.+....++...    ....+...+++++ ++++++|+
T Consensus        20 ~~~kV~ViGa-G--~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIi   95 (330)
T 3ldh_A           20 SYNKITVVGC-D--AVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVI   95 (330)
T ss_dssp             CCCEEEEEST-T--HHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEE
Confidence            3568999999 8  999999999999988  7777  6777666543332221    1122222335877 89988876

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=93.11  E-value=0.093  Score=51.27  Aligned_cols=40  Identities=10%  Similarity=0.094  Sum_probs=34.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .+.|+++|++|  -||+++|+.|++ |.+|.+  |++++.+++++
T Consensus         5 ~k~vlITGas~--gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~   46 (245)
T 3e9n_A            5 KKIAVVTGATG--GMGIEIVKDLSR-DHIVYALGRNPEHLAALAE   46 (245)
T ss_dssp             -CEEEEESTTS--HHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT
T ss_pred             CCEEEEEcCCC--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh
Confidence            46799999998  999999999998 888887  88888888876

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=93.10  E-value=0.11  Score=56.65  Aligned_cols=129  Identities=16%  Similarity=0.148  Sum_probs=88.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--cc-----------ccceeeecccc-c-c
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--EA-----------QHNLVLSTSYA-A-H  524 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~~-----------~~~l~~~~~~~-~-~  524 (639)
                      +.-++.++|.-   .+|.++|..|++.|.+|++  +++++.++|++....  +.           ..++...++++ + +
T Consensus         7 ~~~~~~vIGlG---~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~   83 (446)
T 4a7p_A            7 GSVRIAMIGTG---YVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVK   83 (446)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHT
T ss_pred             CceEEEEEcCC---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHh
Confidence            45578999976   9999999999999999999  999999999875221  11           12333344675 3 7


Q ss_pred             ceeEEE--EcCcCCh--------------hhh-hcCCCCceeecccccCCcCC------------CCCceeecCCccccC
Q 006607          525 KTKIWL--VGDDLTG--------------KEQ-ARAPKGTIFIPYTQIPPRKL------------RKDCFYHSTPAMIIP  575 (639)
Q Consensus       525 ~~~vwi--vg~~~~~--------------~~q-~~a~~G~~f~~~~~~~~~~~------------R~dc~y~~~~a~~~P  575 (639)
                      +++++|  |+...++              ++. ..+++|++++.-|-+||...            +.|+.+..+|..--|
T Consensus        84 ~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~e  163 (446)
T 4a7p_A           84 DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLRE  163 (446)
T ss_dssp             TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCT
T ss_pred             cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccccc
Confidence            777755  5555432              111 35789999999998888611            147777788776666


Q ss_pred             CCCccccccccccCcchhhhHH
Q 006607          576 PSLSNMHSCENWLGRRVMSAWR  597 (639)
Q Consensus       576 ~~~~~~~~~e~~~pr~~~~Ac~  597 (639)
                      ++..    =++..|.++|.+|-
T Consensus       164 G~a~----~d~~~p~~ivvG~~  181 (446)
T 4a7p_A          164 GAAI----EDFKRPDRVVVGTE  181 (446)
T ss_dssp             TSHH----HHHHSCSCEEEECS
T ss_pred             cchh----hhccCCCEEEEeCC
Confidence            6532    23456777777753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=93.10  E-value=0.033  Score=58.63  Aligned_cols=91  Identities=16%  Similarity=0.167  Sum_probs=56.9

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecc---ccc--cceeEEE-
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS---YAA--HKTKIWL-  530 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~---~~~--~~~~vwi-  530 (639)
                      ++..+.+|++.|| |  .||+.+|++|++. .+|.+  ++.++++++++....- +   +.+++   +++  ++++++| 
T Consensus        12 ~~g~~mkilvlGa-G--~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~~~~~~-~---~d~~d~~~l~~~~~~~DvVi~   83 (365)
T 3abi_A           12 IEGRHMKVLILGA-G--NIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPL-K---VDASNFDKLVEVMKEFELVIG   83 (365)
T ss_dssp             ----CCEEEEECC-S--HHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEE-E---CCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccCCccEEEEECC-C--HHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhccCCcE-E---EecCCHHHHHHHHhCCCEEEE
Confidence            4445668999999 8  9999999999864 57777  8999999887654321 1   22332   443  7778777 


Q ss_pred             -EcCcCChh-hhhcCCCCceeecccccCC
Q 006607          531 -VGDDLTGK-EQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       531 -vg~~~~~~-~q~~a~~G~~f~~~~~~~~  557 (639)
                       +|-..... -..-+..|++++|.|-.++
T Consensus        84 ~~p~~~~~~v~~~~~~~g~~yvD~s~~~~  112 (365)
T 3abi_A           84 ALPGFLGFKSIKAAIKSKVDMVDVSFMPE  112 (365)
T ss_dssp             CCCGGGHHHHHHHHHHHTCEEEECCCCSS
T ss_pred             ecCCcccchHHHHHHhcCcceEeeeccch
Confidence             32222111 0112357899999984433

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=93.09  E-value=0.097  Score=57.09  Aligned_cols=142  Identities=15%  Similarity=0.171  Sum_probs=77.3

Q ss_pred             cCChhHHHHHHhcCcCC--CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--c---------
Q 006607          446 DGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--E---------  510 (639)
Q Consensus       446 ~Gnsltaa~v~~~i~~~--~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--~---------  510 (639)
                      +|+....-+=..++.+.  ..+|.++|+ |  .+|.++|..|++ |.+|++  +++++.+++++....  +         
T Consensus        17 ~~~~~~~~~~~~~~~r~~~~mkIaVIGl-G--~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~   92 (432)
T 3pid_A           17 RGSHMASMTGGQQMGRGSEFMKITISGT-G--YVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE   92 (432)
T ss_dssp             ------------------CCCEEEEECC-S--HHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred             ccchhhhccCCcccccccCCCEEEEECc-C--HHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhh
Confidence            34444443444455443  348999997 5  999999999998 999999  899999999875211  0         


Q ss_pred             cccceeeecccc-c-cceeEEE--EcCcCCh--------------hhhhcCCCCceeecccccCCc---CCC---CCcee
Q 006607          511 AQHNLVLSTSYA-A-HKTKIWL--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR---KLR---KDCFY  566 (639)
Q Consensus       511 ~~~~l~~~~~~~-~-~~~~vwi--vg~~~~~--------------~~q~~a~~G~~f~~~~~~~~~---~~R---~dc~y  566 (639)
                      ...++...++++ + ++++++|  |.+..++              ++...+++|++++.-|-+||.   +++   .+--+
T Consensus        93 ~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~~~~v  172 (432)
T 3pid_A           93 KPLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGIDNV  172 (432)
T ss_dssp             SCCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred             ccCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence            012322334565 3 7777755  4333322              122236899999999989987   222   11122


Q ss_pred             ecCCccccCCCCccccccccccCcchhhh
Q 006607          567 HSTPAMIIPPSLSNMHSCENWLGRRVMSA  595 (639)
Q Consensus       567 ~~~~a~~~P~~~~~~~~~e~~~pr~~~~A  595 (639)
                      ...|...-|+...    -++--|.|+|.+
T Consensus       173 ~~sPe~~~~G~A~----~~~l~p~rIvvG  197 (432)
T 3pid_A          173 IFSPEFLREGRAL----YDNLHPSRIVIG  197 (432)
T ss_dssp             EECCCCCCTTSHH----HHHHSCSCEEES
T ss_pred             eecCccCCcchhh----hcccCCceEEec
Confidence            3366665565532    123335555544

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=93.06  E-value=0.043  Score=56.68  Aligned_cols=40  Identities=15%  Similarity=0.203  Sum_probs=33.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~  504 (639)
                      .++|+|+||||  -||+++++.|.++ |.+|..  |+.++.+.+.
T Consensus        24 ~~~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~   66 (372)
T 3slg_A           24 AKKVLILGVNG--FIGHHLSKRILETTDWEVFGMDMQTDRLGDLV   66 (372)
T ss_dssp             CCEEEEESCSS--HHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG
T ss_pred             CCEEEEECCCC--hHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc
Confidence            46899999999  9999999999988 999988  7766655443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=93.04  E-value=0.079  Score=50.92  Aligned_cols=39  Identities=18%  Similarity=0.167  Sum_probs=33.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKL  503 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l  503 (639)
                      .+.|+++|++|  -||+++++.|.++  |.+|..  |++++.+++
T Consensus         4 ~~~ilVtGasG--~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~   46 (253)
T 1xq6_A            4 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI   46 (253)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc
Confidence            46799999999  9999999999998  899988  777776654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=93.04  E-value=0.1  Score=52.03  Aligned_cols=43  Identities=16%  Similarity=0.237  Sum_probs=34.8

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006607          463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~  507 (639)
                      .+.|+++|++  |  -||+++|+.|+++|.+|.+  |+++   ..++++++.
T Consensus         6 ~k~vlVTGas~~~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   55 (275)
T 2pd4_A            6 GKKGLIVGVANNK--SIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL   55 (275)
T ss_dssp             TCEEEEECCCSTT--SHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            3679999999  7  8999999999999999998  6665   555555543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=92.99  E-value=0.14  Score=52.83  Aligned_cols=101  Identities=18%  Similarity=0.227  Sum_probs=68.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDDL  535 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~~  535 (639)
                      ...+|.++|.-   .+|+++|+.|.+.|.+|++  |++++.++++++ +      +...++.++  ++++++|  +.+.-
T Consensus        30 ~~~~I~iIG~G---~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g------~~~~~~~~e~~~~aDvVi~~vp~~~   99 (320)
T 4dll_A           30 YARKITFLGTG---SMGLPMARRLCEAGYALQVWNRTPARAASLAAL-G------ATIHEQARAAARDADIVVSMLENGA   99 (320)
T ss_dssp             CCSEEEEECCT---TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-T------CEEESSHHHHHTTCSEEEECCSSHH
T ss_pred             CCCEEEEECcc---HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-C------CEeeCCHHHHHhcCCEEEEECCCHH
Confidence            34589999984   9999999999999999999  888999988776 1      112335553  6777755  32211


Q ss_pred             Ch-------hhhhcCCCCceeecccccCCcC-------CC-CCceeecCCcc
Q 006607          536 TG-------KEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAM  572 (639)
Q Consensus       536 ~~-------~~q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~  572 (639)
                      .-       +-...+++|+++++.+.++|..       ++ +.+.|...|.+
T Consensus       100 ~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~  151 (320)
T 4dll_A          100 VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVS  151 (320)
T ss_dssp             HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred             HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence            11       1122468999999999887761       11 45567666654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=92.98  E-value=0.073  Score=53.84  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus         9 ~k~~lVTGas~--GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~   55 (291)
T 1e7w_A            9 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   55 (291)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHh
Confidence            46799999998  9999999999999999988   67788888777653

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=92.96  E-value=0.17  Score=54.47  Aligned_cols=87  Identities=16%  Similarity=0.212  Sum_probs=60.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccc-ce----------e----------eec
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH-NL----------V----------LST  519 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~-~l----------~----------~~~  519 (639)
                      .++|+++|+ |  .||.++++.+...|.+|++  ++.++++.+++ ++...-. +.          .          +..
T Consensus       172 g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~-lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  247 (401)
T 1x13_A          172 PAKVMVIGA-G--VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME  247 (401)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH-TTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence            468999997 6  9999999999999999888  77888887743 3322100 00          0          000


Q ss_pred             cccc--cceeEEEE-----c----CcCChhhhhcCCCCceeeccc
Q 006607          520 SYAA--HKTKIWLV-----G----DDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       520 ~~~~--~~~~vwiv-----g----~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      .+++  +.++++|.     |    ..++.+..+.+++|.++++++
T Consensus       248 ~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva  292 (401)
T 1x13_A          248 LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA  292 (401)
T ss_dssp             HHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence            1332  45677662     3    336788999999999999999

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=92.95  E-value=0.072  Score=55.13  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+   |++++.+++++++.
T Consensus        46 ~k~~lVTGas~--GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~   92 (328)
T 2qhx_A           46 VPVALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN   92 (328)
T ss_dssp             CCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence            46899999998  9999999999999999987   77788888777653

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=92.90  E-value=0.18  Score=55.82  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=61.7

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----c
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  532 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g  532 (639)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++..  +.. ..+.     .+.++++  +++++++.    -
T Consensus       275 L~GktVgIIG~-G--~IG~~vA~~l~~~G~~V~v~d~~~~~~~--~a~-~~G~-----~~~~l~ell~~aDiVi~~~~t~  343 (494)
T 3d64_A          275 IAGKIAVVAGY-G--DVGKGCAQSLRGLGATVWVTEIDPICAL--QAA-MEGY-----RVVTMEYAADKADIFVTATGNY  343 (494)
T ss_dssp             CTTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSCHHHHH--HHH-TTTC-----EECCHHHHTTTCSEEEECSSSS
T ss_pred             cCCCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCChHhHH--HHH-HcCC-----EeCCHHHHHhcCCEEEECCCcc
Confidence            35678999995 5  9999999999999999999  5554432  111 1111     1234543  66777552    3


Q ss_pred             CcCChhhhhcCCCCceeecccccCC
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ..++.+...++++|+++|++++.+.
T Consensus       344 ~lI~~~~l~~MK~gAilINvgrg~v  368 (494)
T 3d64_A          344 HVINHDHMKAMRHNAIVCNIGHFDS  368 (494)
T ss_dssp             CSBCHHHHHHCCTTEEEEECSSSSC
T ss_pred             cccCHHHHhhCCCCcEEEEcCCCcc
Confidence            4588899999999999999999766

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=92.88  E-value=0.12  Score=47.33  Aligned_cols=40  Identities=13%  Similarity=0.255  Sum_probs=34.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      ...+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++
T Consensus        18 ~~~~v~IiG~-G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~   59 (155)
T 2g1u_A           18 KSKYIVIFGC-G--RLGSLIANLASSSGHSVVVVDKNEYAFHRLN   59 (155)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSC
T ss_pred             CCCcEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4578999997 6  9999999999999999998  7788877654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=92.86  E-value=0.08  Score=54.28  Aligned_cols=42  Identities=17%  Similarity=0.099  Sum_probs=34.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+.|+|+|++|  -||+++++.|.++|.+|..  |+.++.+.+.++
T Consensus         9 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~   52 (357)
T 1rkx_A            9 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET   52 (357)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH
T ss_pred             CCEEEEECCCc--hHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh
Confidence            35799999999  9999999999999999988  766655544443

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=92.85  E-value=0.19  Score=55.60  Aligned_cols=86  Identities=13%  Similarity=0.076  Sum_probs=61.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE----c
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV----G  532 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv----g  532 (639)
                      -..++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.++..+.   +.     .+.++++  +++++++.    -
T Consensus       255 l~GktVgIIG~-G--~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~---g~-----~~~~l~ell~~aDiVi~~~~t~  323 (479)
T 1v8b_A          255 ISGKIVVICGY-G--DVGKGCASSMKGLGARVYITEIDPICAIQAVME---GF-----NVVTLDEIVDKGDFFITCTGNV  323 (479)
T ss_dssp             CTTSEEEEECC-S--HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTT---TC-----EECCHHHHTTTCSEEEECCSSS
T ss_pred             cCCCEEEEEee-C--HHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHc---CC-----EecCHHHHHhcCCEEEECCChh
Confidence            35678999994 5  9999999999999999999  444433211111   11     2335553  67777663    2


Q ss_pred             CcCChhhhhcCCCCceeecccccCC
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      ..++.+....+++|+++|++++.+.
T Consensus       324 ~lI~~~~l~~MK~gailiNvgrg~~  348 (479)
T 1v8b_A          324 DVIKLEHLLKMKNNAVVGNIGHFDD  348 (479)
T ss_dssp             SSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             hhcCHHHHhhcCCCcEEEEeCCCCc
Confidence            4578889999999999999999776

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=92.84  E-value=0.099  Score=51.26  Aligned_cols=43  Identities=12%  Similarity=0.156  Sum_probs=34.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch--hhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK--DDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~--~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+ |.+  |++  +..++++++.
T Consensus         5 ~k~vlVtGas~--gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~   52 (254)
T 1sby_A            5 NKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN   52 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC
T ss_pred             CcEEEEECCCC--hHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC
Confidence            46799999998  9999999999999996 776  654  5566676554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=92.82  E-value=0.14  Score=53.05  Aligned_cols=141  Identities=19%  Similarity=0.227  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHcCCcEEE--ecc-------cccccccccCC---ceeeec-CCCCcce----------eeecCC-------
Q 006607          399 IEEAILEADAKGVKVIS--LGL-------LNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS-------  448 (639)
Q Consensus       399 I~~Ai~~A~~~G~kv~~--LG~-------ln~~e~ln~~g---~~~~~k-~p~~L~i----------rvv~Gn-------  448 (639)
                      +..-.+.|++.|++..-  |..       ++..++||.|-   ++.++. -|++++.          |=|||-       
T Consensus        51 v~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~  130 (288)
T 1b0a_A           51 VASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGR  130 (288)
T ss_dssp             HHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhH
Confidence            45556778888887654  322       22335678873   434442 1333331          113333       


Q ss_pred             ---------hhHHHHHHhcCc-----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc
Q 006607          449 ---------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ  512 (639)
Q Consensus       449 ---------sltaa~v~~~i~-----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~  512 (639)
                               .-|+..+++-+.     -..++|+++|+.+  -||+.+|+.|.++|-.|++  ++.+.             
T Consensus       131 l~~g~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~--iVG~p~A~lL~~~gAtVtv~hs~t~~-------------  195 (288)
T 1b0a_A          131 LCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFTKN-------------  195 (288)
T ss_dssp             HHTTCCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSCSC-------------
T ss_pred             HhCCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCh--HHHHHHHHHHHHCCCeEEEEeCCchh-------------
Confidence                     235666655543     3578999999996  7899999999999999999  22211             


Q ss_pred             cceeeeccccc--cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc---CCCCCcee
Q 006607          513 HNLVLSTSYAA--HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFY  566 (639)
Q Consensus       513 ~~l~~~~~~~~--~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y  566 (639)
                              +++  ++++++|  +|  +.++++..   ++|+++||++ +++.   ++--|+-|
T Consensus       196 --------L~~~~~~ADIVI~Avg~p~lI~~~~v---k~GavVIDVg-i~r~~~g~l~GDVdf  246 (288)
T 1b0a_A          196 --------LRHHVENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INRLENGKVVGDVVF  246 (288)
T ss_dssp             --------HHHHHHHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEECTTSCEECSBCH
T ss_pred             --------HHHHhccCCEEEECCCCcCcCCHHHc---CCCcEEEEcc-CCccCCCCccCCcCH
Confidence                    221  3556666  22  23555544   8999999999 7664   23356653

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=92.82  E-value=0.13  Score=51.88  Aligned_cols=100  Identities=13%  Similarity=0.155  Sum_probs=67.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc--C
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--L  535 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~  535 (639)
                      .+|.++|. |  .+|+++|+.|++.|.+|++  |++++.++++++       .+...+++++  ++++++|  +.+.  +
T Consensus         2 ~~i~iIG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~aDvvi~~vp~~~~~   71 (287)
T 3pef_A            2 QKFGFIGL-G--IMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-------GAERAATPCEVVESCPVTFAMLADPAAA   71 (287)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------TCEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEEee-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHhcCCEEEEEcCCHHHH
Confidence            47899996 5  9999999999999999999  899999988775       1112335553  5677755  3211  1


Q ss_pred             Ch-----hhh-hcCCCCceeecccccCCcC-------CC-CCceeecCCccc
Q 006607          536 TG-----KEQ-ARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMI  573 (639)
Q Consensus       536 ~~-----~~q-~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~~  573 (639)
                      ..     ++. ..+++|+++++.+.++|..       ++ +.+.|...|.+.
T Consensus        72 ~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pef_A           72 EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcC
Confidence            10     111 2468999999999887761       11 456666666543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=92.78  E-value=0.15  Score=52.48  Aligned_cols=89  Identities=17%  Similarity=0.191  Sum_probs=61.2

Q ss_pred             HHHHHHhcCc---CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--
Q 006607          451 AAAVVVNSLP---KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--  523 (639)
Q Consensus       451 taa~v~~~i~---~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--  523 (639)
                      |++.+++-+.   -.-++|+|+|+.+  -+|+.+|+.|.++|..|++  ++.+                     ++++  
T Consensus       135 Tp~gv~~lL~~~~l~Gk~vvVvG~s~--iVG~plA~lL~~~gAtVtv~~~~t~---------------------~L~~~~  191 (276)
T 3ngx_A          135 TPRAVIDIMDYYGYHENTVTIVNRSP--VVGRPLSMMLLNRNYTVSVCHSKTK---------------------DIGSMT  191 (276)
T ss_dssp             HHHHHHHHHHHHTCCSCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHH
T ss_pred             cHHHHHHHHHHhCcCCCEEEEEcCCh--HHHHHHHHHHHHCCCeEEEEeCCcc---------------------cHHHhh
Confidence            5556655554   3578999999997  8999999999999999999  2211                     1222  


Q ss_pred             cceeEEE--Ec--CcCChhhhhcCCCCceeecccccCCc--CCCCCcee
Q 006607          524 HKTKIWL--VG--DDLTGKEQARAPKGTIFIPYTQIPPR--KLRKDCFY  566 (639)
Q Consensus       524 ~~~~vwi--vg--~~~~~~~q~~a~~G~~f~~~~~~~~~--~~R~dc~y  566 (639)
                      ++++++|  +|  +.++++.   .++|+++||++ +++.  ++--|+-|
T Consensus       192 ~~ADIVI~Avg~p~~I~~~~---vk~GavVIDvg-i~~~~gkl~GDVdf  236 (276)
T 3ngx_A          192 RSSKIVVVAVGRPGFLNREM---VTPGSVVIDVG-INYVNDKVVGDANF  236 (276)
T ss_dssp             HHSSEEEECSSCTTCBCGGG---CCTTCEEEECC-CEEETTEEECSBCH
T ss_pred             ccCCEEEECCCCCccccHhh---ccCCcEEEEec-cCccCCceeccccH
Confidence            4566766  33  3466654   49999999999 6653  23355553

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=92.74  E-value=0.42  Score=49.15  Aligned_cols=58  Identities=21%  Similarity=0.179  Sum_probs=44.4

Q ss_pred             hHHHHHHhc-C-cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          450 LAAAVVVNS-L-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       450 ltaa~v~~~-i-~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .||+-.+.. . .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.++++++.
T Consensus       141 ~ta~~al~~~~~~~~g~~vlI~Ga~g--~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~  202 (345)
T 2j3h_A          141 MTAYAGFYEVCSPKEGETVYVSAASG--AVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF  202 (345)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            355555522 2 23456899999998  9999999999999999887  888999988866554

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=92.66  E-value=0.051  Score=55.95  Aligned_cols=103  Identities=13%  Similarity=0.183  Sum_probs=66.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-----
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-----  532 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-----  532 (639)
                      ++|-++|--   .+|+++|+.|.+.|.+|+.  |++++.++++++ +.      ....+.++  +.++++|  +.     
T Consensus         6 ~kIgfIGLG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~------~~~~s~~e~~~~~dvvi~~l~~~~~~   75 (297)
T 4gbj_A            6 EKIAFLGLG---NLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GA------TVVENAIDAITPGGIVFSVLADDAAV   75 (297)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEC-------CTTTTT-TC------EECSSGGGGCCTTCEEEECCSSHHHH
T ss_pred             CcEEEEecH---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CC------eEeCCHHHHHhcCCceeeeccchhhH
Confidence            469999875   9999999999999999999  888887766543 11      11334443  5565644  22     


Q ss_pred             -CcCChhhhhcCCCCceeecccccCCcCC-------C-CCceeecCCccccCC
Q 006607          533 -DDLTGKEQARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMIIPP  576 (639)
Q Consensus       533 -~~~~~~~q~~a~~G~~f~~~~~~~~~~~-------R-~dc~y~~~~a~~~P~  576 (639)
                       +.+..+-...+++|+++++.|-++|...       + +.+.|.+.|.+--|.
T Consensus        76 ~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~  128 (297)
T 4gbj_A           76 EELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPE  128 (297)
T ss_dssp             HHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHH
T ss_pred             HHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCcc
Confidence             2333334456799999999999988811       1 678899888865443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=92.65  E-value=0.13  Score=51.04  Aligned_cols=42  Identities=17%  Similarity=0.294  Sum_probs=34.0

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cch---hhHHHHHhh
Q 006607          463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~~---~~~~~l~~~  506 (639)
                      .+.|+++|++  |  -||+++|+.|+++|.+|.+  |++   +..++++++
T Consensus         9 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~   57 (265)
T 1qsg_A            9 GKRILVTGVASKL--SIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ   57 (265)
T ss_dssp             TCEEEECCCCSTT--SHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH
T ss_pred             CCEEEEECCCCCC--CHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh
Confidence            3579999999  7  8999999999999999988  665   445555544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=92.59  E-value=0.1  Score=54.31  Aligned_cols=36  Identities=8%  Similarity=0.141  Sum_probs=31.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      .+.|+|+||||  -||+++++.|.++|.+|..  |+.++.
T Consensus         5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~   42 (352)
T 1xgk_A            5 KKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKGL   42 (352)
T ss_dssp             CCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhCCCEEEEEECCCChh
Confidence            35799999999  9999999999999999887  766654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=92.58  E-value=0.14  Score=50.85  Aligned_cols=83  Identities=16%  Similarity=0.271  Sum_probs=56.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCC--
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLT--  536 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~--  536 (639)
                      .+|.++|+ |  .+|+++|+.|.+.|.+ |.+  |++++.++++++.+..      ..+++++  ++++++|+--.-+  
T Consensus        11 m~i~iiG~-G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~Dvvi~av~~~~~   81 (266)
T 3d1l_A           11 TPIVLIGA-G--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAE------YTTDLAEVNPYAKLYIVSLKDSAF   81 (266)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCE------EESCGGGSCSCCSEEEECCCHHHH
T ss_pred             CeEEEEcC-C--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCc------eeCCHHHHhcCCCEEEEecCHHHH
Confidence            46999997 7  9999999999999988 666  8889998888764321      1234543  6677766311100  


Q ss_pred             h---hhh-hcCCCCceeeccccc
Q 006607          537 G---KEQ-ARAPKGTIFIPYTQI  555 (639)
Q Consensus       537 ~---~~q-~~a~~G~~f~~~~~~  555 (639)
                      .   ++. ...++|+++++.+..
T Consensus        82 ~~v~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           82 AELLQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHHHHhhcCCCcEEEECCCC
Confidence            0   111 235689999999873

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=92.56  E-value=0.12  Score=52.36  Aligned_cols=37  Identities=16%  Similarity=0.180  Sum_probs=30.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+|+|++|++-||+++|+.|+++|.+|.+  |+++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~   68 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA   68 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            457899999997223999999999999999998  6643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=92.55  E-value=0.047  Score=59.55  Aligned_cols=34  Identities=12%  Similarity=0.155  Sum_probs=30.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.|+|+||||  -||+++++.|.++|.+|..  |+++
T Consensus       150 ~~~VLVTGatG--~iG~~l~~~L~~~g~~V~~l~R~~~  185 (508)
T 4f6l_B          150 LGNTLLTGATG--FLGAYLIEALQGYSHRIYCFIRADN  185 (508)
T ss_dssp             CEEEEESCTTS--HHHHHHHHHTBTTEEEEEEEEESSS
T ss_pred             CCeEEEECCcc--chHHHHHHHHHhcCCEEEEEECCCC
Confidence            46899999999  9999999999999999988  6665

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=92.51  E-value=0.11  Score=50.06  Aligned_cols=40  Identities=18%  Similarity=0.193  Sum_probs=35.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +|+++|+ |  .+|+.+|+.|.++|.+|++  +++++.++++++.
T Consensus         2 ~iiIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~   43 (218)
T 3l4b_C            2 KVIIIGG-E--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL   43 (218)
T ss_dssp             CEEEECC-H--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc
Confidence            5899997 6  9999999999999999999  8899999887654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=92.48  E-value=0.22  Score=52.91  Aligned_cols=87  Identities=16%  Similarity=0.156  Sum_probs=60.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc-cce------------e-ee--------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNL------------V-LS--------  518 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-~~l------------~-~~--------  518 (639)
                      .++|+++|+ |  .||+++++.+...|.+|+.  ++.++.+.+++ ++.... .+.            . ..        
T Consensus       172 g~~V~ViGa-G--~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~  247 (384)
T 1l7d_A          172 PARVLVFGV-G--VAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  247 (384)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCH
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence            468999997 6  9999999999999999888  77778877765 433211 000            0 00        


Q ss_pred             c-cccc--cceeEEE--E---cC----cCChhhhhcCCCCceeeccc
Q 006607          519 T-SYAA--HKTKIWL--V---GD----DLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       519 ~-~~~~--~~~~vwi--v---g~----~~~~~~q~~a~~G~~f~~~~  553 (639)
                      . .+++  +.++++|  +   |.    .++.+..+.+++|.++++++
T Consensus       248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva  294 (384)
T 1l7d_A          248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  294 (384)
T ss_dssp             HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence            0 1332  5667766  3   42    35788889999999999999

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=92.45  E-value=0.1  Score=53.15  Aligned_cols=35  Identities=9%  Similarity=0.159  Sum_probs=30.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        19 ~~~~vlVTGasG--~iG~~l~~~L~~~g~~V~~~~r~~~   55 (330)
T 2pzm_A           19 SHMRILITGGAG--CLGSNLIEHWLPQGHEILVIDNFAT   55 (330)
T ss_dssp             TCCEEEEETTTS--HHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCc
Confidence            356899999999  9999999999999999988  5443

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=92.42  E-value=0.087  Score=52.54  Aligned_cols=38  Identities=21%  Similarity=0.262  Sum_probs=32.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++..
T Consensus        26 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~   65 (260)
T 3gem_A           26 SSAPILITGASQ--RVGLHCALRLLEHGHRVIISYRTEHASV   65 (260)
T ss_dssp             -CCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence            356799999998  9999999999999999999  7766543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=92.41  E-value=0.11  Score=53.76  Aligned_cols=45  Identities=20%  Similarity=0.170  Sum_probs=37.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-----------cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----------ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-----------~~~~~~~~l~~~~~  508 (639)
                      ..+.|+|+|++|  -||+++|+.|+++|.+|.+           |+.++.+++.+++.
T Consensus         8 ~gk~~lVTGas~--GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~   63 (319)
T 1gz6_A            8 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR   63 (319)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHH
Confidence            356799999998  9999999999999999997           25677777766653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=92.40  E-value=0.13  Score=51.48  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=34.3

Q ss_pred             CcEEEEeccc--CchhhHHHHHHHHhccCcEEEe--cchh---hHHHHHhhC
Q 006607          463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKD---DYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gat--g~~kig~ava~~L~~~~~~v~~--~~~~---~~~~l~~~~  507 (639)
                      .+.|+|+|++  |  -||+++|+.|+++|.+|.+  |+.+   ..++++++.
T Consensus        21 ~k~vlVTGas~~~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~   70 (285)
T 2p91_A           21 GKRALITGVANER--SIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF   70 (285)
T ss_dssp             TCEEEECCCSSTT--SHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            4679999998  6  8999999999999999998  6654   455555443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=92.38  E-value=0.12  Score=50.44  Aligned_cols=34  Identities=24%  Similarity=0.379  Sum_probs=30.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         3 k~vlVTGas~--giG~~~a~~l~~~G~~V~~~~r~~~~   38 (239)
T 2ekp_A            3 RKALVTGGSR--GIGRAIAEALVARGYRVAIASRNPEE   38 (239)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5799999998  9999999999999999988  77665

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=92.38  E-value=0.069  Score=55.17  Aligned_cols=100  Identities=13%  Similarity=0.177  Sum_probs=68.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcC----
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD----  533 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~----  533 (639)
                      ++|-++|--   .+|+++|+.|.+.|.+|+.  |++++.+.|+++ +..      ...+.++  +++++++  +.+    
T Consensus         4 ~kIgfIGlG---~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~-Ga~------~a~s~~e~~~~~dvv~~~l~~~~~v   73 (300)
T 3obb_A            4 KQIAFIGLG---HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-GAS------AARSARDAVQGADVVISMLPASQHV   73 (300)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-TCE------ECSSHHHHHTTCSEEEECCSCHHHH
T ss_pred             CEEEEeeeh---HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHc-CCE------EcCCHHHHHhcCCceeecCCchHHH
Confidence            468888864   9999999999999999999  999999998765 111      1334443  5666644  211    


Q ss_pred             --cCChh--hhhcCCCCceeecccccCCcC-------CC-CCceeecCCccc
Q 006607          534 --DLTGK--EQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMI  573 (639)
Q Consensus       534 --~~~~~--~q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~~  573 (639)
                        .+..+  -...+++|+++||.|-++|..       ++ +.+.|.+-|+.-
T Consensus        74 ~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsG  125 (300)
T 3obb_A           74 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG  125 (300)
T ss_dssp             HHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred             HHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence              11111  123578999999999998871       22 677888888754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=92.36  E-value=0.16  Score=44.53  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=35.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+|+++|+ |  .+|+.+|+.|.+.|.+|++  +++++.+.++++
T Consensus         5 m~i~IiG~-G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~   46 (140)
T 1lss_A            5 MYIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE   46 (140)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh
Confidence            47999998 7  9999999999999999998  888888888764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=92.34  E-value=0.15  Score=50.28  Aligned_cols=31  Identities=19%  Similarity=0.275  Sum_probs=27.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         8 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~   38 (257)
T 3tl3_A            8 RDAVAVVTGGAS--GLGLATTKRLLDAGAQVVV   38 (257)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHHTCEEEE
T ss_pred             cCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            356799999997  9999999999999999998

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=92.32  E-value=0.13  Score=53.07  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=28.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc--cCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~--~~~~v~~  494 (639)
                      .+.|+|+|++|  -||+++|+.|.+  +|.+|..
T Consensus        10 ~~~vlVTGatG--~IG~~l~~~L~~~~~g~~V~~   41 (362)
T 3sxp_A           10 NQTILITGGAG--FVGSNLAFHFQENHPKAKVVV   41 (362)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHHCTTSEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHhhCCCCeEEE
Confidence            46899999999  999999999998  9999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=92.30  E-value=0.2  Score=47.22  Aligned_cols=42  Identities=21%  Similarity=0.176  Sum_probs=36.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+++|++|  -||+++++.+.+.|.+|..  +++++.+.+++
T Consensus        38 ~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A           38 PGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CCCEEEEeeCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            456899999998  9999999999999999887  78888877754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=92.25  E-value=0.28  Score=51.52  Aligned_cols=66  Identities=17%  Similarity=0.245  Sum_probs=45.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccc--cceeeec--cccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ--HNLVLST--SYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~--~~l~~~~--~~~~-~~~~vwiv  531 (639)
                      ...+|.++|| |  .||+++|..|++.|.  ++.+  +++++.+-...++.....  .+ +.++  .+++ ++++++|+
T Consensus         8 ~~~kV~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~-~~i~~~~~~a~~~aDiVvi   82 (326)
T 3vku_A            8 DHQKVILVGD-G--AVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSP-KKIYSAEYSDAKDADLVVI   82 (326)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCC-CEEEECCGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCC-cEEEECcHHHhcCCCEEEE
Confidence            4468999997 7  999999999998887  7777  777777744443322211  12 2233  3666 88888775

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=92.22  E-value=0.078  Score=52.29  Aligned_cols=37  Identities=8%  Similarity=0.114  Sum_probs=31.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      -.+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus        21 m~k~vlITGas~--gIG~~la~~l~~~G~~V~~~~r~~~~~   59 (251)
T 3orf_A           21 MSKNILVLGGSG--ALGAEVVKFFKSKSWNTISIDFRENPN   59 (251)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred             cCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCcccc
Confidence            357899999998  9999999999999999998  666543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=92.06  E-value=0.1  Score=50.46  Aligned_cols=34  Identities=18%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |++++
T Consensus         2 k~vlVtGasg--~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (255)
T 2dkn_A            2 SVIAITGSAS--GIGAALKELLARAGHTVIGIDRGQAD   37 (255)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4699999998  9999999999999999998  66543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=92.05  E-value=0.15  Score=45.99  Aligned_cols=41  Identities=22%  Similarity=0.354  Sum_probs=36.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ..+|+++|. |  .+|+.+|+.|.+.|.+|++  +++++.+++++.
T Consensus         7 ~~~viIiG~-G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~   49 (140)
T 3fwz_A            7 CNHALLVGY-G--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER   49 (140)
T ss_dssp             CSCEEEECC-S--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT
T ss_pred             CCCEEEECc-C--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc
Confidence            568999998 5  9999999999999999999  889999988763

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=92.00  E-value=0.18  Score=50.83  Aligned_cols=99  Identities=13%  Similarity=0.102  Sum_probs=66.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc--CC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--LT  536 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--~~  536 (639)
                      +|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+++++.       .+...++.++  ++++++|  +.+.  +.
T Consensus         3 ~I~iiG~-G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~~advvi~~v~~~~~~~   72 (287)
T 3pdu_A            3 TYGFLGL-G--IMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------GARQASSPAEVCAACDITIAMLADPAAAR   72 (287)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------TCEECSCHHHHHHHCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCeecCCHHHHHHcCCEEEEEcCCHHHHH
Confidence            6889995 5  9999999999999999999  889999988765       1112334543  5676655  2221  11


Q ss_pred             h-----hh-hhcCCCCceeecccccCCcCC-------C-CCceeecCCccc
Q 006607          537 G-----KE-QARAPKGTIFIPYTQIPPRKL-------R-KDCFYHSTPAMI  573 (639)
Q Consensus       537 ~-----~~-q~~a~~G~~f~~~~~~~~~~~-------R-~dc~y~~~~a~~  573 (639)
                      +     ++ ...+++|+++++.+..+|...       + +.+.|...|.+.
T Consensus        73 ~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  123 (287)
T 3pdu_A           73 EVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSG  123 (287)
T ss_dssp             HHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred             HHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccC
Confidence            1     11 124689999999998877611       1 456676666543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=91.94  E-value=0.17  Score=48.17  Aligned_cols=88  Identities=11%  Similarity=0.097  Sum_probs=55.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc-cceeeeccccc--cceeEEEEcC--cCCh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ-HNLVLSTSYAA--HKTKIWLVGD--DLTG  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~-~~l~~~~~~~~--~~~~vwivg~--~~~~  537 (639)
                      +|.++|++|  .+|+++|+.|.+.|.+|.+  |++++.++++++...... .+ +..+++++  ++++++|.--  ...+
T Consensus         2 ~i~iiGa~G--~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~Vi~~~~~~~~~   78 (212)
T 1jay_A            2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS-ITGMKNEDAAEACDIAVLTIPWEHAI   78 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC-EEEEEHHHHHHHCSEEEECSCHHHHH
T ss_pred             eEEEEcCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC-CChhhHHHHHhcCCEEEEeCChhhHH
Confidence            588999999  9999999999999999988  888888887765321000 11 12234443  6677766311  1111


Q ss_pred             h---hhh-cCCCCceeecccc-cC
Q 006607          538 K---EQA-RAPKGTIFIPYTQ-IP  556 (639)
Q Consensus       538 ~---~q~-~a~~G~~f~~~~~-~~  556 (639)
                      +   +.. .. +|+++++.+. ++
T Consensus        79 ~~~~~l~~~~-~~~~vi~~~~g~~  101 (212)
T 1jay_A           79 DTARDLKNIL-REKIVVSPLVPVS  101 (212)
T ss_dssp             HHHHHTHHHH-TTSEEEECCCCEE
T ss_pred             HHHHHHHHHc-CCCEEEEcCCCcC
Confidence            1   111 12 4888888886 44

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=91.92  E-value=0.37  Score=53.16  Aligned_cols=96  Identities=13%  Similarity=0.120  Sum_probs=67.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-Cc-EEEe--cchh----hHHHHHhhC-Cc---cc-----------ccceeeec
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GI-KVAT--ICKD----DYEKLKLRI-PV---EA-----------QHNLVLST  519 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~-~v~~--~~~~----~~~~l~~~~-~~---~~-----------~~~l~~~~  519 (639)
                      ..+|.++|+.   .+|.++|..|++. |. +|++  ++++    +.++|++.. +.   +.           ..++...+
T Consensus        18 ~mkIaVIGlG---~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt   94 (478)
T 3g79_A           18 IKKIGVLGMG---YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP   94 (478)
T ss_dssp             CCEEEEECCS---TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES
T ss_pred             CCEEEEECcC---HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC
Confidence            4579999986   9999999999999 99 9999  8888    999998742 11   11           23333333


Q ss_pred             cccc-cceeEEE--EcCcCChh---------------hh-hcCCCCceeecccccCCcCCC
Q 006607          520 SYAA-HKTKIWL--VGDDLTGK---------------EQ-ARAPKGTIFIPYTQIPPRKLR  561 (639)
Q Consensus       520 ~~~~-~~~~vwi--vg~~~~~~---------------~q-~~a~~G~~f~~~~~~~~~~~R  561 (639)
                      +.++ ++++++|  |++..+++               +. ..+++|++++.-|-+||...|
T Consensus        95 d~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~  155 (478)
T 3g79_A           95 DFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTE  155 (478)
T ss_dssp             CGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTT
T ss_pred             cHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHH
Confidence            4444 7776655  66654321               11 247899999999989988433

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=91.90  E-value=0.066  Score=52.70  Aligned_cols=39  Identities=26%  Similarity=0.236  Sum_probs=33.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK  502 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~  502 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.++
T Consensus        14 ~~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   54 (247)
T 1uzm_A           14 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPKG   54 (247)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence            356899999998  9999999999999999998  77665543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=91.80  E-value=0.24  Score=50.80  Aligned_cols=86  Identities=17%  Similarity=0.164  Sum_probs=60.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcCc--
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGDD--  534 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~~--  534 (639)
                      ..+|.++|.-   .+|+++|+.|.+.|.+|++  |++++.+++++. +.      ...++.++  ++++++|  +.+.  
T Consensus        21 m~~I~iIG~G---~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~------~~~~~~~~~~~~aDvvi~~vp~~~~   90 (310)
T 3doj_A           21 MMEVGFLGLG---IMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GA------SVCESPAEVIKKCKYTIAMLSDPCA   90 (310)
T ss_dssp             SCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TC------EECSSHHHHHHHCSEEEECCSSHHH
T ss_pred             CCEEEEECcc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CC------eEcCCHHHHHHhCCEEEEEcCCHHH
Confidence            4589999964   9999999999999999999  889999988754 11      11334543  5676655  3221  


Q ss_pred             CCh-----hh-hhcCCCCceeecccccCCc
Q 006607          535 LTG-----KE-QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       535 ~~~-----~~-q~~a~~G~~f~~~~~~~~~  558 (639)
                      +..     ++ ...+++|+++++.+.++|.
T Consensus        91 ~~~v~~~~~~l~~~l~~g~~vv~~st~~~~  120 (310)
T 3doj_A           91 ALSVVFDKGGVLEQICEGKGYIDMSTVDAE  120 (310)
T ss_dssp             HHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHhCchhhhhccCCCCEEEECCCCCHH
Confidence            111     11 1356899999999988776

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=91.78  E-value=0.34  Score=49.63  Aligned_cols=44  Identities=20%  Similarity=0.152  Sum_probs=37.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      ..+.|+++|++|  -||.++++.+.+.|.+|..  +++++.+.+ ++++
T Consensus       145 ~g~~vlV~Ga~g--giG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g  190 (333)
T 1v3u_A          145 GGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG  190 (333)
T ss_dssp             SSCEEEEESTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT
T ss_pred             CCCEEEEecCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC
Confidence            457899999998  9999999999999999988  788888887 4444

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=91.77  E-value=0.2  Score=52.16  Aligned_cols=84  Identities=13%  Similarity=0.060  Sum_probs=57.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++.+..++. .       +...++++  ++++++++       
T Consensus       155 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~-g-------~~~~~l~e~l~~aDvVi~~vp~~~~  223 (330)
T 2gcg_A          155 QSTVGIIGL-G--RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEF-Q-------AEFVSTPELAAQSDFIVVACSLTPA  223 (330)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTT-T-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhc-C-------ceeCCHHHHHhhCCEEEEeCCCChH
Confidence            457999998 6  9999999999999999988  555555544321 1       11124443  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccCC
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                       ...++.+....+++|++++..++.++
T Consensus       224 t~~~i~~~~~~~mk~gailIn~srg~~  250 (330)
T 2gcg_A          224 TEGLCNKDFFQKMKETAVFINISRGDV  250 (330)
T ss_dssp             TTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence             23344556678899999999998554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=91.75  E-value=0.09  Score=52.22  Aligned_cols=36  Identities=25%  Similarity=0.284  Sum_probs=31.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus        21 ~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           21 SRSVLVTGGNR--GIGLAIARAFADAGDKVAITYRSGEPP   58 (253)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHhh
Confidence            56899999998  9999999999999999988  666544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=91.73  E-value=0.21  Score=50.79  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=27.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (348)
T 1ek6_A            3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            5799999999  9999999999999999987

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=91.72  E-value=0.11  Score=53.82  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=29.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.|+|+|++|  -||+++|+.|.++|.+|..  |+.+
T Consensus        25 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITG--QDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCcc
Confidence            5799999999  9999999999999999988  5543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=91.70  E-value=0.2  Score=49.44  Aligned_cols=39  Identities=18%  Similarity=0.262  Sum_probs=34.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ++|+|+|| |  -||+++++.|.++|.+|..  |++++.+.+++
T Consensus         6 ~~ilVtGa-G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~   46 (286)
T 3ius_A            6 GTLLSFGH-G--YTARVLSRALAPQGWRIIGTSRNPDQMEAIRA   46 (286)
T ss_dssp             CEEEEETC-C--HHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH
T ss_pred             CcEEEECC-c--HHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh
Confidence            57999998 9  9999999999999999988  88888777654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=91.69  E-value=0.056  Score=56.38  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=30.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .++|+|+|++|  -||+++++.|.++|.+|..  |+.++
T Consensus        29 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~   65 (379)
T 2c5a_A           29 NLKISITGAGG--FIASHIARRLKHEGHYVIASDWKKNE   65 (379)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred             CCeEEEECCcc--HHHHHHHHHHHHCCCeEEEEECCCcc
Confidence            35899999999  9999999999999999988  65544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=91.67  E-value=0.12  Score=50.58  Aligned_cols=34  Identities=18%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++
T Consensus         2 k~vlVTGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~   37 (257)
T 1fjh_A            2 SIIVISGCAT--GIGAATRKVLEAAGHQIVGIDIRDAE   37 (257)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4689999998  9999999999999999998  66544

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=91.66  E-value=0.23  Score=52.03  Aligned_cols=65  Identities=17%  Similarity=0.202  Sum_probs=44.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      ..+|.++|| |  .+|.++|..|++.|. ++.+  +++++.+....++...     .... +.. +++++ ++++++|+
T Consensus         7 ~~kI~viGa-G--~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-v~~t~d~~a~~~aDiVIi   81 (324)
T 3gvi_A            7 RNKIALIGS-G--MIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAK-FTGANDYAAIEGADVVIV   81 (324)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESSGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCE-EEEeCCHHHHCCCCEEEE
Confidence            358999999 7  999999999999998 8888  7777765333332221     1222 232 35766 88888765

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=91.66  E-value=0.26  Score=51.22  Aligned_cols=42  Identities=12%  Similarity=0.045  Sum_probs=36.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       162 ~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  205 (354)
T 2j8z_A          162 AGDYVLIHAGLS--GVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK  205 (354)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            456899999998  9999999999999999988  78888888743

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=91.62  E-value=0.13  Score=51.47  Aligned_cols=37  Identities=22%  Similarity=0.325  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus        13 ~~k~vlVTGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~   51 (269)
T 3vtz_A           13 TDKVAIVTGGSS--GIGLAVVDALVRYGAKVVSVSLDEKSD   51 (269)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCC--C
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCchhc
Confidence            577899999998  9999999999999999998  655543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=91.56  E-value=0.21  Score=49.24  Aligned_cols=86  Identities=14%  Similarity=0.124  Sum_probs=55.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCc--CCh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD--LTG  537 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~--~~~  537 (639)
                      .+|.++| +|  .+|+++|+.|.+.|.+|.+  |++++.++++++.+...      .+++++  ++++++++--.  ...
T Consensus         4 m~i~iiG-~G--~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~D~Vi~~v~~~~~~   74 (259)
T 2ahr_A            4 MKIGIIG-VG--KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSHQDLIDQVDLVILGIKPQLFE   74 (259)
T ss_dssp             CEEEEEC-CS--HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSHHHHHHTCSEEEECSCGGGHH
T ss_pred             cEEEEEC-CC--HHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe------eCCHHHHHhcCCEEEEEeCcHhHH
Confidence            4799999 46  9999999999999988888  88888888876532111      223443  56666553221  111


Q ss_pred             hhhhcCCCCceeecccc-cCCc
Q 006607          538 KEQARAPKGTIFIPYTQ-IPPR  558 (639)
Q Consensus       538 ~~q~~a~~G~~f~~~~~-~~~~  558 (639)
                      +-...+.+|.++|+.+- +++.
T Consensus        75 ~v~~~l~~~~~vv~~~~~~~~~   96 (259)
T 2ahr_A           75 TVLKPLHFKQPIISMAAGISLQ   96 (259)
T ss_dssp             HHHTTSCCCSCEEECCTTCCHH
T ss_pred             HHHHHhccCCEEEEeCCCCCHH
Confidence            11223457778887742 5554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=91.55  E-value=0.11  Score=50.32  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      +.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus         4 k~vlITGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~   40 (236)
T 1ooe_A            4 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSANDQ   40 (236)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            5799999998  9999999999999999998  666553

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=91.54  E-value=0.15  Score=51.90  Aligned_cols=100  Identities=18%  Similarity=0.194  Sum_probs=67.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCc--
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDD--  534 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~--  534 (639)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.+++++.       .+...+++++  + ++++|+  .+.  
T Consensus        15 ~~~I~vIG~-G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~~~~~-aDvvi~~vp~~~~   83 (296)
T 3qha_A           15 QLKLGYIGL-G--NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-------GATLADSVADVAA-ADLIHITVLDDAQ   83 (296)
T ss_dssp             CCCEEEECC-S--TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-------TCEECSSHHHHTT-SSEEEECCSSHHH
T ss_pred             CCeEEEECc-C--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCEEcCCHHHHHh-CCEEEEECCChHH
Confidence            357999996 5  9999999999999999999  889999988765       1112335554  5 877663  211  


Q ss_pred             CC---hhhhhcCCCCceeecccccCCcC-------CC-CCceeecCCccc
Q 006607          535 LT---GKEQARAPKGTIFIPYTQIPPRK-------LR-KDCFYHSTPAMI  573 (639)
Q Consensus       535 ~~---~~~q~~a~~G~~f~~~~~~~~~~-------~R-~dc~y~~~~a~~  573 (639)
                      +.   .+-...+++|+++++.|.++|..       ++ +.+.|.+.|.+.
T Consensus        84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g  133 (296)
T 3qha_A           84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSG  133 (296)
T ss_dssp             HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEES
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
Confidence            10   11123478999999999887761       11 356666666543

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=91.54  E-value=0.33  Score=52.31  Aligned_cols=110  Identities=15%  Similarity=0.234  Sum_probs=70.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-Cc-cc-----------ccceeeecccc-c-ccee
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EA-----------QHNLVLSTSYA-A-HKTK  527 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~-~~-~~-----------~~~l~~~~~~~-~-~~~~  527 (639)
                      +|.++|+ |  .+|.++|..|++.|.+|++  +++++.+++++.. +. +.           ..++...++++ + ++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            2 RISIFGL-G--YVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             EEEEECC-S--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            5889995 6  9999999999999999998  8899999998751 11 00           11222334565 3 6676


Q ss_pred             EEE--EcCcCCh-------------hhhh-cCCC---CceeecccccCCcC----C----------C--CCceeecCCcc
Q 006607          528 IWL--VGDDLTG-------------KEQA-RAPK---GTIFIPYTQIPPRK----L----------R--KDCFYHSTPAM  572 (639)
Q Consensus       528 vwi--vg~~~~~-------------~~q~-~a~~---G~~f~~~~~~~~~~----~----------R--~dc~y~~~~a~  572 (639)
                      ++|  |++..++             ++.. .+++   |++++..|.++|..    +          +  .|+.+..+|..
T Consensus        79 vviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~  158 (436)
T 1mv8_A           79 VSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEF  158 (436)
T ss_dssp             EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCC
T ss_pred             EEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECccc
Confidence            655  5444320             1111 2467   99999888777642    1          1  35555566665


Q ss_pred             ccCCC
Q 006607          573 IIPPS  577 (639)
Q Consensus       573 ~~P~~  577 (639)
                      .-|+.
T Consensus       159 ~~~G~  163 (436)
T 1mv8_A          159 LREST  163 (436)
T ss_dssp             CCTTS
T ss_pred             ccccc
Confidence            55554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=91.51  E-value=0.13  Score=50.12  Aligned_cols=36  Identities=14%  Similarity=0.195  Sum_probs=31.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY  500 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~  500 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |++++.
T Consensus         7 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~   44 (241)
T 1dhr_A            7 ARRVLVYGGRG--ALGSRCVQAFRARNWWVASIDVVENEE   44 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSCCTT
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCEEEEEeCChhhc
Confidence            45799999998  9999999999999999998  666543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=91.37  E-value=0.31  Score=49.21  Aligned_cols=92  Identities=24%  Similarity=0.283  Sum_probs=59.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccc------------------cceeeeccccc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ------------------HNLVLSTSYAA  523 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~------------------~~l~~~~~~~~  523 (639)
                      ++|.++|+ |  .+|+++|..|++.|.+|++  +++++.+++++++.....                  ..+...+++++
T Consensus         5 ~kV~VIGa-G--~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            5 TNVTVLGT-G--VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            57999998 5  9999999999999999999  888888888765321100                  11112335653


Q ss_pred             --cceeEEE--EcCcCChh-----hh-hcCCCCceeecccc-cCCc
Q 006607          524 --HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPYTQ-IPPR  558 (639)
Q Consensus       524 --~~~~vwi--vg~~~~~~-----~q-~~a~~G~~f~~~~~-~~~~  558 (639)
                        ++++++|  |.+..+.+     +. ..+++|++++..+. +|..
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~  127 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS  127 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence              7788776  33321111     11 24789999986543 5443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=91.32  E-value=0.18  Score=50.97  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=33.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      +.+.++|+|+++  -||+|+|+.|+++|.+|.+  |++++.+.+
T Consensus         6 ~gKvalVTGas~--GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~   47 (258)
T 4gkb_A            6 QDKVVIVTGGAS--GIGGAISMRLAEERAIPVVFARHAPDGAFL   47 (258)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCCHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCcccHHHH
Confidence            457889999997  9999999999999999999  766654433

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=91.22  E-value=0.89  Score=46.81  Aligned_cols=94  Identities=13%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-Cc---ccccceeeeccccc-cceeEEEE--cC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV---EAQHNLVLSTSYAA-HKTKIWLV--GD  533 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~-~~---~~~~~l~~~~~~~~-~~~~vwiv--g~  533 (639)
                      .-+|.++|+-   .+|+++|..|++.|.+|++  |++++.+.|+++- +.   +...++...++.++ ++++++|+  -.
T Consensus        14 ~~kI~iIG~G---~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~vk~   90 (335)
T 1z82_A           14 EMRFFVLGAG---SWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPV   90 (335)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECSCG
T ss_pred             CCcEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEECCH
Confidence            3468999976   9999999999999999998  8889999998762 11   00001112223444 56677663  11


Q ss_pred             cCChhhhhcC-CCCceeecccc-cCCcC
Q 006607          534 DLTGKEQARA-PKGTIFIPYTQ-IPPRK  559 (639)
Q Consensus       534 ~~~~~~q~~a-~~G~~f~~~~~-~~~~~  559 (639)
                      .-.++=...+ |+|+++++.+. +++.+
T Consensus        91 ~~~~~v~~~l~~~~~~vv~~~nGi~~~~  118 (335)
T 1z82_A           91 QYIREHLLRLPVKPSMVLNLSKGIEIKT  118 (335)
T ss_dssp             GGHHHHHTTCSSCCSEEEECCCCCCTTT
T ss_pred             HHHHHHHHHhCcCCCEEEEEeCCCCCCc
Confidence            1111111111 27899999885 77653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=91.18  E-value=0.22  Score=52.06  Aligned_cols=68  Identities=16%  Similarity=0.146  Sum_probs=46.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-cccc-c-cceeE
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYA-A-HKTKI  528 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~-~-~~~~v  528 (639)
                      ++...+|.++|| |  .+|.++|..|++.|. +|.+  +++++.+....++...     ...+ +.. ++++ + +++++
T Consensus         6 ~~~~~kI~VIGa-G--~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~ea~~~aDi   81 (331)
T 1pzg_A            6 VQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEYSYEAALTGADC   81 (331)
T ss_dssp             CSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEECSHHHHHTTCSE
T ss_pred             CCCCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCE-EEEeCCHHHHhCCCCE
Confidence            445568999999 7  999999999999998 8888  7777777633322211     1122 333 4577 5 88888


Q ss_pred             EEE
Q 006607          529 WLV  531 (639)
Q Consensus       529 wiv  531 (639)
                      +|+
T Consensus        82 Vi~   84 (331)
T 1pzg_A           82 VIV   84 (331)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            663

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=91.04  E-value=0.11  Score=45.71  Aligned_cols=39  Identities=15%  Similarity=0.275  Sum_probs=32.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ++|+++|+ |  .+|+.+|+.|.+.|.+|.+  +++++.+.+++
T Consensus         7 ~~v~I~G~-G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~   47 (144)
T 2hmt_A            7 KQFAVIGL-G--RFGGSIVKELHRMGHEVLAVDINEEKVNAYAS   47 (144)
T ss_dssp             CSEEEECC-S--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT
T ss_pred             CcEEEECC-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46999998 8  9999999999999999888  66776665543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=91.03  E-value=0.2  Score=52.57  Aligned_cols=66  Identities=18%  Similarity=0.196  Sum_probs=44.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCCcc-cccceeeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVE-AQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~----l~~~~~~~-~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ...+|.++|+ |  .||+++|..|++.|.  ++.+  +++++.+.    |++..+.- .... +...++++ ++++++|+
T Consensus         4 ~~~kI~ViGa-G--~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~-i~~~~~~a~~~aDvVvi   79 (326)
T 3pqe_A            4 HVNKVALIGA-G--FVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVK-TSYGTYEDCKDADIVCI   79 (326)
T ss_dssp             SCCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCE-EEEECGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeE-EEeCcHHHhCCCCEEEE
Confidence            4568999997 7  999999999998887  7777  77777776    44432211 1111 12224666 88888765

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=90.94  E-value=0.35  Score=51.18  Aligned_cols=84  Identities=14%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------  531 (639)
                      ..++|-++|- |  .||+++|+.|...|.+|+..++..-.....+.+.+      .+.++++  ++++++++        
T Consensus       159 ~g~tvGIIGl-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~------~~~~l~ell~~aDiV~l~~Plt~~t  229 (352)
T 3gg9_A          159 KGQTLGIFGY-G--KIGQLVAGYGRAFGMNVLVWGRENSKERARADGFA------VAESKDALFEQSDVLSVHLRLNDET  229 (352)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCE------ECSSHHHHHHHCSEEEECCCCSTTT
T ss_pred             CCCEEEEEeE-C--HHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCce------EeCCHHHHHhhCCEEEEeccCcHHH
Confidence            3568999997 4  99999999999999999983322211111112211      1335554  56666552        


Q ss_pred             cCcCChhhhhcCCCCceeecccc
Q 006607          532 GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                      -..++.+....+++|+++|.+++
T Consensus       230 ~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          230 RSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TTCBCHHHHTTSCTTCEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence            23466788889999999999998

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=90.91  E-value=0.15  Score=49.01  Aligned_cols=33  Identities=21%  Similarity=0.353  Sum_probs=29.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.|+++|++|  -||+++|+.|.++|.+|.+  |+++
T Consensus         3 k~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            3 RSALVTGGAS--GLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEccCcc
Confidence            5799999998  9999999999999999988  5543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=90.90  E-value=0.12  Score=53.48  Aligned_cols=63  Identities=14%  Similarity=0.129  Sum_probs=42.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc-----cccceeeec-cccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLST-SYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~~-~~~~-~~~~vwiv  531 (639)
                      +|.++|| |  .+|.++|..|++.|.  ++.+  +++++.+....++...     ...+ +..+ ++++ ++++++|+
T Consensus         2 kI~ViGa-G--~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aDiVVi   75 (294)
T 1oju_A            2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGGADYSLLKGSEIIVV   75 (294)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCE-EEEeCCHHHhCCCCEEEE
Confidence            6899999 8  999999999998888  8888  7777765322221111     1122 2323 4556 88888775

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=90.90  E-value=0.31  Score=49.39  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~G~~V~~   29 (338)
T 1udb_A            2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            589999999  9999999999999999987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=90.88  E-value=0.16  Score=51.03  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=29.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.+.|+|+||+|  -||+++|+.|.++|.+|..  |+.+
T Consensus        11 ~~~~vlVTGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   47 (321)
T 2pk3_A           11 GSMRALITGVAG--FVGKYLANHLTEQNVEVFGTSRNNE   47 (321)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CcceEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            567899999999  9999999999999999988  5543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=90.83  E-value=0.14  Score=51.46  Aligned_cols=37  Identities=22%  Similarity=0.408  Sum_probs=32.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      -+.++|+|+++  -||+|+|+.|+++|.+|.+  |++|+++
T Consensus        11 GK~alVTGas~--GIG~aia~~la~~Ga~Vv~~~~~~~~~~   49 (242)
T 4b79_A           11 GQQVLVTGGSS--GIGAAIAMQFAELGAEVVALGLDADGVH   49 (242)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTSTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHh
Confidence            46889999997  9999999999999999999  7776654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=90.75  E-value=0.12  Score=51.15  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=29.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.|+|+||+|  -||+++|+.|.++|.+|.+  |++++
T Consensus         4 k~vlVTGasg--~IG~~la~~L~~~G~~V~~~~r~~~~   39 (267)
T 3rft_A            4 KRLLVTGAAG--QLGRVMRERLAPMAEILRLADLSPLD   39 (267)
T ss_dssp             EEEEEESTTS--HHHHHHHHHTGGGEEEEEEEESSCCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHhcCCEEEEEecCCcc
Confidence            5799999998  9999999999999999988  55543

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=90.71  E-value=0.61  Score=50.80  Aligned_cols=126  Identities=14%  Similarity=0.149  Sum_probs=83.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc--c-----------ccceeeeccccc--cce
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE--A-----------QHNLVLSTSYAA--HKT  526 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~--~-----------~~~l~~~~~~~~--~~~  526 (639)
                      .+|.++|+ |  .+|.++|..|++.|.+|++  +++++.+++++....-  .           ..++...+++++  +++
T Consensus         3 mkI~VIG~-G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a   79 (450)
T 3gg2_A            3 LDIAVVGI-G--YVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA   79 (450)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred             CEEEEECc-C--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence            47899997 5  9999999999999999999  9999999998752211  0           123223345653  677


Q ss_pred             eEEE--EcCcCCh-------------hhh-hcCCCCceeecccccCCc---CC-----------C--CCceeecCCcccc
Q 006607          527 KIWL--VGDDLTG-------------KEQ-ARAPKGTIFIPYTQIPPR---KL-----------R--KDCFYHSTPAMII  574 (639)
Q Consensus       527 ~vwi--vg~~~~~-------------~~q-~~a~~G~~f~~~~~~~~~---~~-----------R--~dc~y~~~~a~~~  574 (639)
                      +++|  |+...++             ++. ..+++|++++.-|-+||.   ++           +  .|+.+..+|..--
T Consensus        80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~  159 (450)
T 3gg2_A           80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLK  159 (450)
T ss_dssp             SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCC
T ss_pred             CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhc
Confidence            7755  5554321             111 236899999999988876   11           1  4677777776666


Q ss_pred             CCCCccccccccccCcchhhhH
Q 006607          575 PPSLSNMHSCENWLGRRVMSAW  596 (639)
Q Consensus       575 P~~~~~~~~~e~~~pr~~~~Ac  596 (639)
                      |+...    -++..|.++|.++
T Consensus       160 eG~~~----~~~~~p~~ivvG~  177 (450)
T 3gg2_A          160 EGNAI----DDFMKPDRVVVGV  177 (450)
T ss_dssp             TTSHH----HHHHSCSCEEEEE
T ss_pred             ccchh----hhccCCCEEEEEc
Confidence            65542    2355677777553

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=90.67  E-value=0.3  Score=50.96  Aligned_cols=67  Identities=16%  Similarity=0.179  Sum_probs=44.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc--hhhHHHHHhhCCccc----ccceeeec-cccc-cceeEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC--KDDYEKLKLRIPVEA----QHNLVLST-SYAA-HKTKIWL  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~--~~~~~~l~~~~~~~~----~~~l~~~~-~~~~-~~~~vwi  530 (639)
                      ...+|.++|+ |  .+|+++|..|++.|. +|.+  ++  +++.+-...++....    ...-+..+ ++++ ++++++|
T Consensus         7 ~~~kv~ViGa-G--~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVI   83 (315)
T 3tl2_A            7 KRKKVSVIGA-G--FTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVV   83 (315)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEE
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEE
Confidence            3468999997 7  999999999999999 8888  55  445544433322211    11112223 4777 8998877


Q ss_pred             E
Q 006607          531 V  531 (639)
Q Consensus       531 v  531 (639)
                      +
T Consensus        84 i   84 (315)
T 3tl2_A           84 I   84 (315)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=90.57  E-value=0.17  Score=50.64  Aligned_cols=31  Identities=23%  Similarity=0.214  Sum_probs=28.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      +|+|+|+||  =||+++++.|.++|.+|+.  |++
T Consensus         2 kILVTGatG--fIG~~L~~~L~~~G~~V~~l~R~~   34 (298)
T 4b4o_A            2 RVLVGGGTG--FIGTALTQLLNARGHEVTLVSRKP   34 (298)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCC
Confidence            589999999  9999999999999999988  543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=90.55  E-value=0.26  Score=52.21  Aligned_cols=86  Identities=10%  Similarity=0.089  Sum_probs=58.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cce---eEEE--EcC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKT---KIWL--VGD  533 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~---~vwi--vg~  533 (639)
                      ..+|.++|. |  .+|+++|+.|.+.|.+|++  |++++.++++++ +      +...+++++  +++   +++|  |.+
T Consensus        22 ~mkIgiIGl-G--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-g------~~~~~s~~e~~~~a~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGL-G--RMGADMVRRLRKGGHECVVYDLNVNAVQALERE-G------IAGARSIEEFCAKLVKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-T------CBCCSSHHHHHHHSCSSCEEEECSCG
T ss_pred             CCEEEEECc-h--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-C------CEEeCCHHHHHhcCCCCCEEEEeCCH
Confidence            468999995 5  9999999999999999999  888999988765 1      111234443  344   6644  322


Q ss_pred             cCC----hhhhhcCCCCceeecccccCCc
Q 006607          534 DLT----GKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       534 ~~~----~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      ...    .+-...+++|+++++.+.++|.
T Consensus        92 ~~v~~vl~~l~~~l~~g~iiId~st~~~~  120 (358)
T 4e21_A           92 AVVDSMLQRMTPLLAANDIVIDGGNSHYQ  120 (358)
T ss_dssp             GGHHHHHHHHGGGCCTTCEEEECSSCCHH
T ss_pred             HHHHHHHHHHHhhCCCCCEEEeCCCCChH
Confidence            210    1112346899999999987764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=90.54  E-value=0.29  Score=49.17  Aligned_cols=84  Identities=13%  Similarity=0.194  Sum_probs=57.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCcC--
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDL--  535 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~--  535 (639)
                      .+|.++| .|  .+|+++|+.|.+.|.+|.+  |++++.+.++++ +      +...+++++  ++++++|+  .+.-  
T Consensus         6 m~i~iiG-~G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~D~vi~~v~~~~~~   75 (299)
T 1vpd_A            6 MKVGFIG-LG--IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-G------AETASTAKAIAEQCDVIITMLPNSPHV   75 (299)
T ss_dssp             CEEEEEC-CS--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-T------CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             ceEEEEC-ch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-C------CeecCCHHHHHhCCCEEEEECCCHHHH
Confidence            3799999 46  9999999999999999988  888888888765 1      111224443  56677663  2111  


Q ss_pred             Ch-----hhh-hcCCCCceeecccccCC
Q 006607          536 TG-----KEQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       536 ~~-----~~q-~~a~~G~~f~~~~~~~~  557 (639)
                      +.     ++. ..+++|+++++.+..++
T Consensus        76 ~~~~~~~~~l~~~l~~~~~vv~~s~~~~  103 (299)
T 1vpd_A           76 KEVALGENGIIEGAKPGTVLIDMSSIAP  103 (299)
T ss_dssp             HHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             HHHHhCcchHhhcCCCCCEEEECCCCCH
Confidence            10     111 24688999999987655

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=90.53  E-value=0.22  Score=54.85  Aligned_cols=93  Identities=16%  Similarity=0.177  Sum_probs=60.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC--------ccc---------ccceeeeccccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP--------VEA---------QHNLVLSTSYAA  523 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~--------~~~---------~~~l~~~~~~~~  523 (639)
                      .++|.++|+ |  .+|+++|..|++.|.+|++  ++++..+++++++.        .+.         ...+...+++++
T Consensus         5 ~~kVgVIGa-G--~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~   81 (483)
T 3mog_A            5 VQTVAVIGS-G--TMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA   81 (483)
T ss_dssp             CCCEEEECC-S--HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG
T ss_pred             CCEEEEECc-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH
Confidence            357999999 4  9999999999999999999  88998888765421        110         011112335666


Q ss_pred             -cceeEEE--EcCcCChh-----hh-hcCCCCceee-cccccCCc
Q 006607          524 -HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFI-PYTQIPPR  558 (639)
Q Consensus       524 -~~~~vwi--vg~~~~~~-----~q-~~a~~G~~f~-~~~~~~~~  558 (639)
                       ++++++|  |-+..+-+     +. ..+++|++++ ..|-+|+.
T Consensus        82 ~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~  126 (483)
T 3mog_A           82 LAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT  126 (483)
T ss_dssp             GGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred             hcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH
Confidence             8888877  32221111     11 2368899885 46656665

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=90.47  E-value=0.17  Score=50.38  Aligned_cols=36  Identities=8%  Similarity=0.150  Sum_probs=31.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus        27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V~~~~r~~~~   64 (260)
T 3un1_A           27 QQKVVVITGASQ--GIGAGLVRAYRDRNYRVVATSRSIKP   64 (260)
T ss_dssp             TCCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            457899999998  9999999999999999998  65544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=90.43  E-value=0.14  Score=51.16  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=32.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ..+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus        27 ~gk~vlVTGas~--gIG~aia~~la~~G~~V~~~~r~~~~~~   66 (266)
T 3uxy_A           27 EGKVALVTGAAG--GIGGAVVTALRAAGARVAVADRAVAGIA   66 (266)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEECSSCCTTSC
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            456899999998  9999999999999999999  6655443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=90.40  E-value=0.22  Score=50.18  Aligned_cols=29  Identities=17%  Similarity=0.342  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|++|  -||+++++.|.++|.+|..
T Consensus         2 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~   30 (330)
T 2c20_A            2 NSILICGGAG--YIGSHAVKKLVDEGLSVVV   30 (330)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHhCCCEEEE
Confidence            4699999999  9999999999999999988

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=90.39  E-value=0.36  Score=50.09  Aligned_cols=31  Identities=19%  Similarity=0.143  Sum_probs=27.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ....|+|+|++|  -||+++|+.|.++|.+|..
T Consensus        10 ~~~~vlVTG~tG--fIG~~l~~~L~~~G~~V~~   40 (404)
T 1i24_A           10 HGSRVMVIGGDG--YCGWATALHLSKKNYEVCI   40 (404)
T ss_dssp             --CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCeEEEeCCCc--HHHHHHHHHHHhCCCeEEE
Confidence            356899999999  9999999999999999988

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=90.32  E-value=0.84  Score=47.14  Aligned_cols=86  Identities=20%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh-CCcccccceeeecccc--c-cceeEEEEcCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYA--A-HKTKIWLVGDD  534 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~--~-~~~~vwivg~~  534 (639)
                      ..+|.++| .|  .+|.++|+.|.+.|.  +|..  |++++.+.+++. +..+.      .++.+  . ++++++|+--.
T Consensus        33 ~~kI~IIG-~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~------~~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           33 MQNVLIVG-VG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEG------TTSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             CSEEEEES-CS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEE------ESCTTGGGGGCCSEEEECSC
T ss_pred             CCEEEEEe-eC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchh------cCCHHHHhhccCCEEEEeCC
Confidence            36899999 56  999999999999999  8888  888888877654 11111      22332  3 56777663111


Q ss_pred             CC--h---hhh-hcCCCCceeecccccCC
Q 006607          535 LT--G---KEQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       535 ~~--~---~~q-~~a~~G~~f~~~~~~~~  557 (639)
                      .+  .   ++. ..+++|+++++++-+.+
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~Svk~  132 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGSVKG  132 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCCCcH
Confidence            11  1   122 24689999999887654

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=90.28  E-value=0.38  Score=49.90  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=29.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~  498 (639)
                      .+.|+|+||+|  -||+++++.|.++| .+|..  |+.+
T Consensus        32 ~~~ilVtGatG--~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (377)
T 2q1s_A           32 NTNVMVVGGAG--FVGSNLVKRLLELGVNQVHVVDNLLS   68 (377)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHcCCceEEEEECCCC
Confidence            35799999999  99999999999999 88888  5443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=90.28  E-value=0.24  Score=50.53  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=28.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ..+.|+|+|+||  -||+++++.|.++|.+|..
T Consensus        26 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   56 (343)
T 2b69_A           26 DRKRILITGGAG--FVGSHLTDKLMMDGHEVTV   56 (343)
T ss_dssp             -CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEcCcc--HHHHHHHHHHHHCCCEEEE
Confidence            356899999999  9999999999999999988

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=90.27  E-value=0.22  Score=50.23  Aligned_cols=31  Identities=26%  Similarity=0.376  Sum_probs=28.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +-+.++|+|+++  -||+|+|+.|+++|-+|.+
T Consensus         8 ~GKvalVTGas~--GIG~aiA~~la~~Ga~Vvi   38 (247)
T 4hp8_A            8 EGRKALVTGANT--GLGQAIAVGLAAAGAEVVC   38 (247)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHcCCEEEE
Confidence            346789999997  9999999999999999999

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=90.24  E-value=0.38  Score=47.91  Aligned_cols=84  Identities=12%  Similarity=0.123  Sum_probs=54.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCcccccceeeeccccc-cceeEEEEcCcCC--h-
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEAQHNLVLSTSYAA-HKTKIWLVGDDLT--G-  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~-~~~~vwivg~~~~--~-  537 (639)
                      +|.++| .|  .+|+++|+.|.+.|.+|.+  |++++.+.+++. +..    .  ..+++++ ++++++|+--.-+  . 
T Consensus         2 ~i~iiG-~G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~--~~~~~~~~~~~D~vi~av~~~~~~~   72 (279)
T 2f1k_A            2 KIGVVG-LG--LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVD----E--AGQDLSLLQTAKIIFLCTPIQLILP   72 (279)
T ss_dssp             EEEEEC-CS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCS----E--EESCGGGGTTCSEEEECSCHHHHHH
T ss_pred             EEEEEc-Cc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCc----c--ccCCHHHhCCCCEEEEECCHHHHHH
Confidence            588999 46  9999999999999999988  888888887643 111    0  1223443 5667766311100  0 


Q ss_pred             --hhh-hcCCCCceeecccccCC
Q 006607          538 --KEQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       538 --~~q-~~a~~G~~f~~~~~~~~  557 (639)
                        ++. ...++|+++++++.+++
T Consensus        73 ~~~~l~~~~~~~~~vv~~~~~~~   95 (279)
T 2f1k_A           73 TLEKLIPHLSPTAIVTDVASVKT   95 (279)
T ss_dssp             HHHHHGGGSCTTCEEEECCSCCH
T ss_pred             HHHHHHhhCCCCCEEEECCCCcH
Confidence              111 23578999998865554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=90.22  E-value=0.19  Score=56.74  Aligned_cols=46  Identities=13%  Similarity=0.133  Sum_probs=35.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~---------~~~~~~~l~~~~~~  509 (639)
                      +.+.|+|+|++|  -||+++|+.|+++|.+|.+  |         ++++.+++.+++..
T Consensus        18 ~gk~~lVTGas~--GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~   74 (613)
T 3oml_A           18 DGRVAVVTGAGA--GLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK   74 (613)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH
Confidence            456889999997  9999999999999999999  5         66777777766543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=90.21  E-value=0.19  Score=50.07  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=30.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+.++
T Consensus         8 ~k~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~   44 (264)
T 2dtx_A            8 DKVVIVTGASM--GIGRAIAERFVDEGSKVIDLSIHDPG   44 (264)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46799999998  9999999999999999988  55543

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=90.17  E-value=0.27  Score=51.88  Aligned_cols=86  Identities=10%  Similarity=0.054  Sum_probs=57.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|.-   .||+++|+.|...|.+|+.  ++.++-  ..++.+.+      ...++++  +.++++++      
T Consensus       167 ~g~tvGIIG~G---~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~------~~~~l~ell~~aDvV~l~~P~t~  235 (347)
T 1mx3_A          167 RGETLGIIGLG---RVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQ------RVSTLQDLLFHSDCVTLHCGLNE  235 (347)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCE------ECSSHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEeEC---HHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCe------ecCCHHHHHhcCCEEEEcCCCCH
Confidence            45679999964   9999999999999999988  333321  11121111      1224443  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccCCc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                        ...++.+....+++|++++.+++-++.
T Consensus       236 ~t~~li~~~~l~~mk~gailIN~arg~~v  264 (347)
T 1mx3_A          236 HNHHLINDFTVKQMRQGAFLVNTARGGLV  264 (347)
T ss_dssp             TCTTSBSHHHHTTSCTTEEEEECSCTTSB
T ss_pred             HHHHHhHHHHHhcCCCCCEEEECCCChHH
Confidence              234667788899999999999995544

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=90.17  E-value=0.21  Score=50.14  Aligned_cols=29  Identities=21%  Similarity=0.224  Sum_probs=27.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|++|  -||+++++.|.++|.+|..
T Consensus         3 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   31 (315)
T 2ydy_A            3 RRVLVTGATG--LLGRAVHKEFQQNNWHAVG   31 (315)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHhCCCeEEE
Confidence            5799999999  9999999999999999988

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=90.16  E-value=0.22  Score=47.96  Aligned_cols=30  Identities=13%  Similarity=0.118  Sum_probs=28.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         6 ~k~vlVTGas~--gIG~~~a~~l~~~G~~V~~   35 (223)
T 3uce_A            6 KTVYVVLGGTS--GIGAELAKQLESEHTIVHV   35 (223)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHCSTTEEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            46789999998  9999999999999999998

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=90.09  E-value=0.15  Score=51.93  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=28.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      ..+.|+|+||||  -||+++|+.|.++|.+|..  |+.+
T Consensus        18 ~~~~vlVtGatG--~iG~~l~~~L~~~G~~V~~~~r~~~   54 (347)
T 4id9_A           18 GSHMILVTGSAG--RVGRAVVAALRTQGRTVRGFDLRPS   54 (347)
T ss_dssp             ---CEEEETTTS--HHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred             CCCEEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            467899999999  9999999999999999988  5543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=90.09  E-value=0.21  Score=49.08  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=30.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+.|+++|++|  -||+++|+.|+++|.+|.+  |+++
T Consensus         7 ~k~vlVTGas~--giG~~ia~~l~~~G~~V~~~~r~~~   42 (250)
T 2fwm_X            7 GKNVWVTGAGK--GIGYATALAFVEAGAKVTGFDQAFT   42 (250)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCchh
Confidence            46799999998  9999999999999999998  5544

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=90.06  E-value=0.6  Score=48.18  Aligned_cols=83  Identities=16%  Similarity=0.157  Sum_probs=54.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe--cch-------hhHHHHHhhCCcccccceeeec-cccc--cceeEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICK-------DDYEKLKLRIPVEAQHNLVLST-SYAA--HKTKIWL  530 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~-------~~~~~l~~~~~~~~~~~l~~~~-~~~~--~~~~vwi  530 (639)
                      .+|.++|. |  .+|+++|+.|++.| .+|++  |++       +..+++++.   +     + .+ +.++  ++++++|
T Consensus        25 m~IgvIG~-G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~---g-----~-~~~s~~e~~~~aDvVi   92 (317)
T 4ezb_A           25 TTIAFIGF-G--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL---G-----V-EPLDDVAGIACADVVL   92 (317)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT---T-----C-EEESSGGGGGGCSEEE
T ss_pred             CeEEEECc-c--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC---C-----C-CCCCHHHHHhcCCEEE
Confidence            57999995 5  99999999999999 99998  665       233333322   1     1 33 4443  6676655


Q ss_pred             --EcCcCChh---h-hhcCCCCceeecccccCCc
Q 006607          531 --VGDDLTGK---E-QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       531 --vg~~~~~~---~-q~~a~~G~~f~~~~~~~~~  558 (639)
                        |.+....+   + ...+++|+++++.|.++|.
T Consensus        93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~  126 (317)
T 4ezb_A           93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPD  126 (317)
T ss_dssp             ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHH
T ss_pred             EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence              32222221   1 2246899999999988776

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=90.02  E-value=0.2  Score=47.06  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=30.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~  499 (639)
                      .++|+++|++|  -||+++++.|.++|.  +|..  |++++
T Consensus         5 ~~~vlVtGatG--~iG~~l~~~l~~~g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            5 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIAPARKALA   43 (215)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEECCBSSCCC
T ss_pred             CceEEEECCCc--HHHHHHHHHHHhCCCCCeEEEEeCCCcc
Confidence            35799999999  999999999999998  8888  65543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=89.76  E-value=0.23  Score=49.26  Aligned_cols=32  Identities=13%  Similarity=0.283  Sum_probs=28.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +-.+.|+|+|+||  -||+++++.|.++|.+|..
T Consensus        10 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~   41 (292)
T 1vl0_A           10 HHHMKILITGANG--QLGREIQKQLKGKNVEVIP   41 (292)
T ss_dssp             --CEEEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             cccceEEEECCCC--hHHHHHHHHHHhCCCeEEe
Confidence            3567999999999  9999999999999999987

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=89.75  E-value=0.27  Score=49.87  Aligned_cols=29  Identities=7%  Similarity=0.225  Sum_probs=26.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc--CcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~--~~~v~~  494 (639)
                      +.|+|+|++|  -||+++|+.|.++  |.+|..
T Consensus         5 ~~vlVTGatG--~iG~~l~~~L~~~~~g~~V~~   35 (348)
T 1oc2_A            5 KNIIVTGGAG--FIGSNFVHYVYNNHPDVHVTV   35 (348)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHCTTCEEEE
T ss_pred             cEEEEeCCcc--HHHHHHHHHHHHhCCCCEEEE
Confidence            5799999999  9999999999988  889887

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=89.66  E-value=0.24  Score=53.84  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc---CcEEEe--cchhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM---GIKVAT--ICKDD  499 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~---~~~v~~--~~~~~  499 (639)
                      ..+.|+|+||||  -||+++|+.|.++   |.+|.+  |+++.
T Consensus        72 ~~~~VLVTGatG--~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           72 ELRTVLLTGATG--FLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CCCEEEEECTTS--HHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            567999999999  9999999999988   889988  65543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=89.66  E-value=0.34  Score=53.15  Aligned_cols=43  Identities=21%  Similarity=0.201  Sum_probs=33.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchh---hHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKD---DYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~---~~~~l~~~  506 (639)
                      ..+.|+++|++|  -||+++|++|+++|.+ |.+  |+.+   +.+++.++
T Consensus       225 ~~~~vLITGgtG--gIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~  273 (486)
T 2fr1_A          225 PTGTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE  273 (486)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHH
Confidence            457899999998  9999999999999985 666  6653   34555444

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=89.61  E-value=0.21  Score=52.38  Aligned_cols=81  Identities=14%  Similarity=0.173  Sum_probs=57.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|--   .||+++|+.|...|.+|+.  |+.++.+.    +...     ....++++  ++++++++      
T Consensus       136 ~gktvGIiGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~~-----~~~~~l~ell~~aDvV~l~lPlt~  203 (324)
T 3evt_A          136 TGQQLLIYGTG---QIGQSLAAKASALGMHVIGVNTTGHPADH----FHET-----VAFTATADALATANFIVNALPLTP  203 (324)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESSCCCCTT----CSEE-----EEGGGCHHHHHHCSEEEECCCCCG
T ss_pred             cCCeEEEECcC---HHHHHHHHHHHhCCCEEEEECCCcchhHh----Hhhc-----cccCCHHHHHhhCCEEEEcCCCch
Confidence            35689999976   9999999999999999998  44332211    1111     12334554  66777653      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                        -..++.+....+++|++++.++|
T Consensus       204 ~t~~li~~~~l~~mk~gailIN~aR  228 (324)
T 3evt_A          204 TTHHLFSTELFQQTKQQPMLINIGR  228 (324)
T ss_dssp             GGTTCBSHHHHHTCCSCCEEEECSC
T ss_pred             HHHHhcCHHHHhcCCCCCEEEEcCC
Confidence              24567788889999999999998

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=89.59  E-value=0.41  Score=50.57  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=56.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|-++|- |  .||+++|+.|...|.+|+.  ++...-+..   ...+      .+.++++  +.++++++      
T Consensus       172 ~gktvGIIGl-G--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~g~~------~~~~l~ell~~sDvV~l~~Plt~  239 (345)
T 4g2n_A          172 TGRRLGIFGM-G--RIGRAIATRARGFGLAIHYHNRTRLSHALE---EGAI------YHDTLDSLLGASDIFLIAAPGRP  239 (345)
T ss_dssp             TTCEEEEESC-S--HHHHHHHHHHHTTTCEEEEECSSCCCHHHH---TTCE------ECSSHHHHHHTCSEEEECSCCCG
T ss_pred             CCCEEEEEEe-C--hhHHHHHHHHHHCCCEEEEECCCCcchhhh---cCCe------EeCCHHHHHhhCCEEEEecCCCH
Confidence            3568999996 4  9999999999999999998  433222211   1111      1234554  56766552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                        -..++.+....+++|++++.++|
T Consensus       240 ~T~~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          240 ELKGFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             GGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCC
Confidence              24467888899999999999998

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=89.58  E-value=0.2  Score=50.56  Aligned_cols=36  Identities=22%  Similarity=0.256  Sum_probs=31.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEK  502 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~  502 (639)
                      +|+|+|+||  -||+++++.|.++ |.+|..  |+.++.+.
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~   40 (345)
T 2bll_A            2 RVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAISR   40 (345)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEEEESCCGGGGG
T ss_pred             eEEEECCCc--HHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Confidence            699999999  9999999999987 899887  77666543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=89.55  E-value=0.22  Score=49.71  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .++|+|+|+||  -||+++++.|.++|.+|..  |+.+
T Consensus         7 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAG--FIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCC--hHHHHHHHHHHHCCCEEEEEecCCc
Confidence            46899999999  9999999999999999988  5443

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=89.55  E-value=0.41  Score=48.13  Aligned_cols=84  Identities=11%  Similarity=0.181  Sum_probs=56.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc--CcCCh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG--DDLTG  537 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg--~~~~~  537 (639)
                      .+|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.++++++ +      +...+++++  ++++++|+-  +.-.-
T Consensus         5 ~~i~iiG~-G--~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~D~vi~~vp~~~~~   74 (301)
T 3cky_A            5 IKIGFIGL-G--AMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-G------AQACENNQKVAAASDIIFTSLPNAGIV   74 (301)
T ss_dssp             CEEEEECC-C--TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-T------CEECSSHHHHHHHCSEEEECCSSHHHH
T ss_pred             CEEEEECc-c--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-C------CeecCCHHHHHhCCCEEEEECCCHHHH
Confidence            47999995 6  9999999999999999988  888888888765 1      111224443  567776631  11100


Q ss_pred             h-------hh-hcCCCCceeecccccCC
Q 006607          538 K-------EQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       538 ~-------~q-~~a~~G~~f~~~~~~~~  557 (639)
                      +       +. ..+++|+++++.+...|
T Consensus        75 ~~v~~~~~~l~~~l~~~~~vv~~~~~~~  102 (301)
T 3cky_A           75 ETVMNGPGGVLSACKAGTVIVDMSSVSP  102 (301)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECCCCCH
T ss_pred             HHHHcCcchHhhcCCCCCEEEECCCCCH
Confidence            1       11 24688999999887654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=89.44  E-value=0.63  Score=45.16  Aligned_cols=38  Identities=13%  Similarity=0.085  Sum_probs=32.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .++|+++|+ |  .+|+.+|+.|.+.|. |++  +++++.++++
T Consensus         9 ~~~viI~G~-G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~   48 (234)
T 2aef_A            9 SRHVVICGW-S--ESTLECLRELRGSEV-FVLAEDENVRKKVLR   48 (234)
T ss_dssp             -CEEEEESC-C--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH
T ss_pred             CCEEEEECC-C--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh
Confidence            568999998 6  999999999999998 877  8888888776

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=89.37  E-value=0.24  Score=53.93  Aligned_cols=37  Identities=16%  Similarity=0.118  Sum_probs=32.1

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhh
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDD  499 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~~--~~~~~  499 (639)
                      ++.+.|+|+||++  =||+|+|+.|++ .|.+|.+  |++++
T Consensus        59 ~~gKvaLVTGASs--GIG~AiA~~LA~~~GA~Vv~~~r~~~~   98 (422)
T 3s8m_A           59 DGPKKVLVIGASS--GYGLASRITAAFGFGADTLGVFFEKPG   98 (422)
T ss_dssp             SSCSEEEEESCSS--HHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             cCCCEEEEECCCh--HHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence            4678899999996  999999999999 9999988  65554

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=89.34  E-value=0.39  Score=52.44  Aligned_cols=63  Identities=11%  Similarity=0.196  Sum_probs=47.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc-ccceeeec---ccc-c--cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA-QHNLVLST---SYA-A--HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~-~~~l~~~~---~~~-~--~~~~vwiv  531 (639)
                      +-+|.++|+.   ++|+.+|+.|.++|.+|++  +++++++++++++.... ..   ..+   .++ +  .++++.|+
T Consensus         3 ~M~iiI~G~G---~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~G---d~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            3 AMKIIILGAG---QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNG---HASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CEEEEEECCS---HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEES---CTTCHHHHHHHTTTTCSEEEE
T ss_pred             cCEEEEECCC---HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEE---cCCCHHHHHhcCCCcCCEEEE
Confidence            4479999997   9999999999999999999  89999999988754211 11   133   255 3  77787775

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=89.30  E-value=0.24  Score=49.46  Aligned_cols=32  Identities=13%  Similarity=0.313  Sum_probs=28.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +|+|+|+||  -||+++++.|.++|.+|..  |+.+
T Consensus         2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   35 (312)
T 3ko8_A            2 RIVVTGGAG--FIGSHLVDKLVELGYEVVVVDNLSS   35 (312)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            699999999  9999999999999999988  5444

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=89.21  E-value=0.24  Score=50.08  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++
T Consensus        10 ~GK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTK--GAGAATVSLFLELGAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSS--HHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             CCCEEEEeccCc--HHHHHHHHHHHHcCCEEEEEECCch
Confidence            457889999996  9999999999999999999  5443

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=89.09  E-value=0.48  Score=49.41  Aligned_cols=64  Identities=13%  Similarity=0.219  Sum_probs=44.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCccc-----ccceeee-ccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEA-----QHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~-----~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      .+|.++|| |  .+|.++|..|++.|. +|.+  +++++++.....+....     ... +.. +++++ ++++++|.
T Consensus        15 ~kI~ViGa-G--~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~~al~~aD~VI~   88 (328)
T 2hjr_A           15 KKISIIGA-G--QIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAK-IFGENNYEYLQNSDVVII   88 (328)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCE-EEECCCHHHHCCCCEEEE
Confidence            58999999 7  999999999999998 8888  77777775332222111     112 333 35766 88888664

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=89.08  E-value=0.37  Score=49.12  Aligned_cols=28  Identities=18%  Similarity=0.261  Sum_probs=25.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc-CcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM-GIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~-~~~v~~  494 (639)
                      +|+|+|++|  -||+++|+.|.++ |.+|..
T Consensus         2 kvlVTGasG--~iG~~l~~~L~~~~g~~V~~   30 (361)
T 1kew_A            2 KILITGGAG--FIGSAVVRHIIKNTQDTVVN   30 (361)
T ss_dssp             EEEEESTTS--HHHHHHHHHHHHHCSCEEEE
T ss_pred             EEEEECCCc--hHhHHHHHHHHhcCCCeEEE
Confidence            589999999  9999999999987 789887

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=89.01  E-value=0.42  Score=50.28  Aligned_cols=86  Identities=15%  Similarity=0.111  Sum_probs=58.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHh-ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~-~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg----  532 (639)
                      ..++|.++|. |  .||+++|+.|. ..|.+|+.  ++.++.+..++. +..      ..+++++  ++++++++-    
T Consensus       162 ~g~~vgIIG~-G--~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~-g~~------~~~~l~ell~~aDvVil~vp~~  231 (348)
T 2w2k_A          162 RGHVLGAVGL-G--AIQKEIARKAVHGLGMKLVYYDVAPADAETEKAL-GAE------RVDSLEELARRSDCVSVSVPYM  231 (348)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-TCE------ECSSHHHHHHHCSEEEECCCCS
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhc-CcE------EeCCHHHHhccCCEEEEeCCCC
Confidence            3568999996 5  99999999999 99999988  555444433221 111      1224443  567776522    


Q ss_pred             ----CcCChhhhhcCCCCceeecccccCC
Q 006607          533 ----DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       533 ----~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                          ..++.+....+++|++++..++.++
T Consensus       232 ~~t~~li~~~~l~~mk~gailin~srg~~  260 (348)
T 2w2k_A          232 KLTHHLIDEAFFAAMKPGSRIVNTARGPV  260 (348)
T ss_dssp             GGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred             hHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence                3455667778999999999998544

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=88.96  E-value=0.42  Score=52.51  Aligned_cols=91  Identities=14%  Similarity=0.126  Sum_probs=60.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cc---eeEEEE--c
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HK---TKIWLV--G  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~---~~vwiv--g  532 (639)
                      .+++|.++|+-   .+|+++|+.|++.|.+|.+  |++++.++++++.+.   ..+...+++++  ++   ++++|+  -
T Consensus        14 ~~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVil~Vp   87 (480)
T 2zyd_A           14 SKQQIGVVGMA---VMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPG---KKLVPYYTVKEFVESLETPRRILLMVK   87 (480)
T ss_dssp             -CBSEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTT---SCEEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCeEEEEccH---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCC---CCeEEeCCHHHHHhCCCCCCEEEEECC
Confidence            35679999976   9999999999999999999  889999999876531   12222334543  33   776552  1


Q ss_pred             C--cCCh--hhh-hcCCCCceeecccccCCc
Q 006607          533 D--DLTG--KEQ-ARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       533 ~--~~~~--~~q-~~a~~G~~f~~~~~~~~~  558 (639)
                      .  .+++  ++. ..+++|+++++.+...+.
T Consensus        88 ~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~  118 (480)
T 2zyd_A           88 AGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ  118 (480)
T ss_dssp             SSSHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             CHHHHHHHHHHHHhhcCCCCEEEECCCCCHH
Confidence            1  1111  122 245789999999875543

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=88.87  E-value=0.31  Score=47.37  Aligned_cols=42  Identities=12%  Similarity=0.112  Sum_probs=36.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP  508 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~  508 (639)
                      .+|.++| +|  .+|+++|+.|.+.|.+|++   |++++.++++++.+
T Consensus        24 mkI~IIG-~G--~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g   68 (220)
T 4huj_A           24 TTYAIIG-AG--AIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG   68 (220)
T ss_dssp             CCEEEEE-CH--HHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT
T ss_pred             CEEEEEC-CC--HHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC
Confidence            5799999 56  9999999999999998887   88899999887643

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=88.83  E-value=0.53  Score=49.66  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=54.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|-++|.-   .||+++|+.|...|.+|..  |++++      ....      ....++++  +.++++++      
T Consensus       170 ~gktiGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~~------~~~~sl~ell~~aDvVil~vP~t~  234 (340)
T 4dgs_A          170 KGKRIGVLGLG---QIGRALASRAEAFGMSVRYWNRSTLS------GVDW------IAHQSPVDLARDSDVLAVCVAASA  234 (340)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCT------TSCC------EECSSHHHHHHTCSEEEECC----
T ss_pred             cCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCccc------ccCc------eecCCHHHHHhcCCEEEEeCCCCH
Confidence            35689999985   9999999999999999988  43332      1111      12334554  56666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                        -..++.+....+++|++++.+++
T Consensus       235 ~t~~li~~~~l~~mk~gailIN~aR  259 (340)
T 4dgs_A          235 ATQNIVDASLLQALGPEGIVVNVAR  259 (340)
T ss_dssp             ------CHHHHHHTTTTCEEEECSC
T ss_pred             HHHHHhhHHHHhcCCCCCEEEECCC
Confidence              23467788888999999999998

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=88.66  E-value=0.36  Score=45.21  Aligned_cols=30  Identities=27%  Similarity=0.263  Sum_probs=27.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cch
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK  497 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~  497 (639)
                      +|+++|++|  -||+++|+.|. +|.+|.+  |++
T Consensus         5 ~vlVtGasg--~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            5 KILLIGASG--TLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             EEEEETTTS--HHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             EEEEEcCCc--HHHHHHHHHHH-CCCeEEEEecCc
Confidence            699999998  99999999999 9999998  543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=88.65  E-value=0.21  Score=51.41  Aligned_cols=32  Identities=16%  Similarity=0.214  Sum_probs=26.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|+++.+-||+++|+.|+++|.+|.+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~   33 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEE
Confidence            46789999873236999999999999999994

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=88.65  E-value=0.48  Score=48.05  Aligned_cols=84  Identities=11%  Similarity=0.183  Sum_probs=55.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc---EEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEEEcCcCC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI---KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWLVGDDLT  536 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~---~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwivg~~~~  536 (639)
                      .+|.++|+ |  .+|+++|+.|.+.|.   +|.+  |++++.++++++.+...      .++.+ + ++++++|+.-  .
T Consensus         4 ~~I~iIG~-G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~------~~~~~~~~~~aDvVilav--~   72 (280)
T 3tri_A            4 SNITFIGG-G--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT------TQDNRQGALNADVVVLAV--K   72 (280)
T ss_dssp             SCEEEESC-S--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE------ESCHHHHHSSCSEEEECS--C
T ss_pred             CEEEEEcc-c--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE------eCChHHHHhcCCeEEEEe--C
Confidence            46899999 5  999999999999998   8888  89999999988643211      22443 3 6777766321  1


Q ss_pred             hh-------hhhc--CCCCceeecccc-cCCc
Q 006607          537 GK-------EQAR--APKGTIFIPYTQ-IPPR  558 (639)
Q Consensus       537 ~~-------~q~~--a~~G~~f~~~~~-~~~~  558 (639)
                      |.       +...  .+++++++..+- ++..
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~  104 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAVGVTTP  104 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecCCCCHH
Confidence            21       1111  477777776543 5544

>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=88.56  E-value=1.5  Score=45.64  Aligned_cols=159  Identities=13%  Similarity=0.129  Sum_probs=96.7

Q ss_pred             HHHcCCcEEEecc----cccccccc-------cCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~ln-------~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.    ++++|.+-       ...-..+.|+|+         ..+|+|+.|-+         +=..++.
T Consensus        67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  146 (309)
T 4f2g_A           67 IFQLGGHAVFMSTRDTQLGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYY  146 (309)
T ss_dssp             HHHTTCEEEEECCSSCEETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHH
Confidence            4579999999986    45566543       344567778876         35678887643         1145666


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhh-CCcccccceeeec-cccc--cceeEEEE
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLR-IPVEAQHNLVLST-SYAA--HKTKIWLV  531 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~-~~~~~~~~l~~~~-~~~~--~~~~vwiv  531 (639)
                      +.... +..+|+++|..+  -+++..+.+|++-|.++.+-.++.|+- .++ +.++.+.. +.++ +.++  ++++|+..
T Consensus       147 e~~g~l~glkva~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~-~~~~~~~~~g~~-v~~~~d~~eav~~aDvvyt  222 (309)
T 4f2g_A          147 EHRGPIRGKTVAWVGDAN--NMLYTWIQAARILDFKLQLSTPPGYAL-DAKLVDAESAPF-YQVFDDPNEACKGADLVTT  222 (309)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCGGGCC-CGGGSCGGGGGG-EEECSSHHHHTTTCSEEEE
T ss_pred             HHhCCCCCCEEEEECCCc--chHHHHHHHHHHcCCEEEEECCcccCC-CHHHHHHHcCCe-EEEEcCHHHHhcCCCEEEe
Confidence            65443 466899999975  899999999999999999966665541 111 11122233 3344 4653  78888776


Q ss_pred             cCcCCh---hhhhcCCCCceeecccccCCc---CCCCCce-eecCCc
Q 006607          532 GDDLTG---KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       532 g~~~~~---~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +-|.+-   +||..  .=..|-+|. +.++   ..++|+. .|.+|+
T Consensus       223 ~~w~smg~e~~~~~--r~~~~~~y~-v~~~~l~~a~~~ai~mH~lP~  266 (309)
T 4f2g_A          223 DVWTSMGFEAENEA--RKRAFADWC-VDEEMMSHANSDALFMHCLPA  266 (309)
T ss_dssp             CCC--------------CCSGGGGC-BCHHHHTTSCTTCEEEECSSC
T ss_pred             cccccCcchhhHHH--HHHHhcCce-eCHHHHHhcCCCeEEECCCCC
Confidence            554332   22211  112344553 8877   4567876 678885

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=88.51  E-value=0.33  Score=50.10  Aligned_cols=79  Identities=18%  Similarity=0.142  Sum_probs=56.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|-++|--   .||+++|+.|...|.+|+.  |+.++.+.            .....++++  ++++++++       
T Consensus       122 g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~aDiV~l~~P~t~~  186 (290)
T 3gvx_A          122 GKALGILGYG---GIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQSDFVLIAIPLTDK  186 (290)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             cchheeeccC---chhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhccCeEEEEeecccc
Confidence            4688999975   9999999999999999998  43332110            012335554  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccccC
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                       -..++.+....+++|++++++++-+
T Consensus       187 t~~li~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          187 TRGMVNSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             TTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred             chhhhhHHHHhhhhcCceEEEeehhc
Confidence             2335677888999999999999844

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=88.47  E-value=1.9  Score=45.52  Aligned_cols=162  Identities=15%  Similarity=0.171  Sum_probs=92.6

Q ss_pred             HHHcCCcEEEecc----ccccccccc-------CCceeeecCCC---------CcceeeecCCh---h------HHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEELNR-------NGEIYLERQPN---------KLKIKVVDGSS---L------AAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~ln~-------~g~~~~~k~p~---------~L~irvv~Gns---l------taa~v~  456 (639)
                      +.++|.+++.|+.    +.++|.+-+       ..-..+.|+|.         ..+|+|+.|-+   +      =..++.
T Consensus        92 ~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~  171 (340)
T 4ep1_A           92 MVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIY  171 (340)
T ss_dssp             HHHTTCEEEEEESCC------CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999975    445565543       34456778875         34577886544   1      144555


Q ss_pred             hcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCCcccccceeeec-ccc-c-cc
Q 006607          457 NSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A-HK  525 (639)
Q Consensus       457 ~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~-~-~~  525 (639)
                      +... -+..+|+++|..+  -+++..+.+|++-|.+|.+-.++.|       +.+++. .++.+.. +.++ +.+ + ++
T Consensus       172 E~~G~l~glkva~vGD~~--nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~-a~~~G~~-v~~~~d~~eav~~  247 (340)
T 4ep1_A          172 EETNTFKGIKLAYVGDGN--NVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAI-AKETGAE-IEILHNPELAVNE  247 (340)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHH-HHHHCCC-EEEESCHHHHHTT
T ss_pred             HHhCCCCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHH-HHHcCCe-EEEECCHHHHhCC
Confidence            5543 2567899999985  7999999999999999998333322       222211 1122233 3344 565 4 88


Q ss_pred             eeEEEEcCcCChhhhhcCCCCceeecccccCCc---CCCCCce-eecCCcc
Q 006607          526 TKIWLVGDDLTGKEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPAM  572 (639)
Q Consensus       526 ~~vwivg~~~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a~  572 (639)
                      ++|+..+-|.+..+......=..|-+| |+.++   ..++|+. -|.+|+-
T Consensus       248 aDVvyt~~w~smg~e~~~~~~~~~~~y-~vt~ell~~ak~dai~MHcLPa~  297 (340)
T 4ep1_A          248 ADFIYTDVWMSMGQEGEEEKYTLFQPY-QINKELVKHAKQTYHFLHCLPAH  297 (340)
T ss_dssp             CSEEEECCC------CHHHHHHHHGGG-CBCHHHHTTSCTTCEEEECSCCC
T ss_pred             CCEEEecCccCCCCCchHHHHHHhccc-cCCHHHHHhcCCCcEEECCCCCC
Confidence            888887666553211000000123344 38877   4557876 6788753

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=88.33  E-value=0.69  Score=50.27  Aligned_cols=140  Identities=16%  Similarity=0.179  Sum_probs=80.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEE-e--c----------chhhHHHHHhhCCcccccceeeecc--ccccce
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVA-T--I----------CKDDYEKLKLRIPVEAQHNLVLSTS--YAAHKT  526 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~-~--~----------~~~~~~~l~~~~~~~~~~~l~~~~~--~~~~~~  526 (639)
                      ..++|+|.| .|  .||+..|+.|.+.|.+|+ +  +          +.+++.+++++... -..+  .++.  +-+.+|
T Consensus       217 ~gk~vaVqG-~G--nVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~-v~~~--~~~~~e~~~~~~  290 (419)
T 3aoe_E          217 RGARVVVQG-LG--QVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGS-LPRL--DLAPEEVFGLEA  290 (419)
T ss_dssp             TTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSS-CSCC--CBCTTTGGGSSC
T ss_pred             cCCEEEEEC-cC--HHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCC-ccee--eccchhhhccCc
Confidence            467899999 45  999999999999999999 5  3          55677777765221 0000  1111  111467


Q ss_pred             eEEE---EcCcCChhhhhcCCCCceeecccccCCcCCCCCceeecCCc-ccc-CCCCccccccccccCcchhhh----HH
Q 006607          527 KIWL---VGDDLTGKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPA-MII-PPSLSNMHSCENWLGRRVMSA----WR  597 (639)
Q Consensus       527 ~vwi---vg~~~~~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a-~~~-P~~~~~~~~~e~~~pr~~~~A----c~  597 (639)
                      +|.+   .+..|+.++-.+.                   -|.+.-.+| |.+ |+.-+      .-..|+++++    +-
T Consensus       291 DVliP~A~~n~i~~~~A~~l-------------------~ak~V~EgAN~p~t~~A~~------~L~~~Gi~~~PD~~aN  345 (419)
T 3aoe_E          291 EVLVLAAREGALDGDRARQV-------------------QAQAVVEVANFGLNPEAEA------YLLGKGALVVPDLLSG  345 (419)
T ss_dssp             SEEEECSCTTCBCHHHHTTC-------------------CCSEEEECSTTCBCHHHHH------HHHHHTCEEECHHHHT
T ss_pred             eEEEecccccccccchHhhC-------------------CceEEEECCCCcCCHHHHH------HHHHCCCEEECHHHHh
Confidence            7766   3444444444222                   244333333 111 11111      1123344433    56


Q ss_pred             HHHHHH-Hhc--------CCCCCccch----hh-hhHHHHHHHHHhcCC
Q 006607          598 IAGIIH-ALE--------GWDLNECGQ----TM-CDIHQVWHASLRHGF  632 (639)
Q Consensus       598 a~~~v~-alE--------gw~~~e~G~----iv-~~i~~iw~aa~kHGF  632 (639)
                      |||++- .+|        .|++.|+-+    || +..+++++.|.++|-
T Consensus       346 aGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~a~~~~~  394 (419)
T 3aoe_E          346 GGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAERGGL  394 (419)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence            666654 454        788777554    34 677999999999874

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=88.33  E-value=0.56  Score=48.26  Aligned_cols=65  Identities=14%  Similarity=0.248  Sum_probs=44.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      ..+|.++|+ |  .+|+++|..|++.|. +|.+  +++++.+....++...     .... +.. +++++ ++++++|.
T Consensus         4 ~~kI~VIGa-G--~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~a~~~aDiVi~   78 (317)
T 2ewd_A            4 RRKIAVIGS-G--QIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSK-VIGTDDYADISGSDVVII   78 (317)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            357999999 7  999999999999998 9888  7777777543222111     1112 333 34655 78887663

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=88.33  E-value=0.17  Score=49.72  Aligned_cols=33  Identities=21%  Similarity=0.295  Sum_probs=29.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.|+|+|++|  -||+++++.|.++|.+|.+  |+.+
T Consensus         3 ~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   37 (267)
T 3ay3_A            3 NRLLVTGAAG--GVGSAIRPHLGTLAHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEESTTS--HHHHHHGGGGGGTEEEEEECCSSCC
T ss_pred             ceEEEECCCC--HHHHHHHHHHHhCCCEEEEEeCCCc
Confidence            4799999999  9999999999999999988  5543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=88.32  E-value=0.18  Score=52.10  Aligned_cols=37  Identities=16%  Similarity=0.142  Sum_probs=29.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      .+.|+|+|++|  -||+++|+.|+++|.+|.+  |+.++.+
T Consensus         2 ~k~vlVTGas~--GIG~ala~~L~~~G~~v~~v~r~~~~~~   40 (327)
T 1jtv_A            2 RTVVLITGCSS--GIGLHLAVRLASDPSQSFKVYATLRDLK   40 (327)
T ss_dssp             CEEEEESCCSS--HHHHHHHHHHHTCTTCCEEEEEEESCGG
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCceEEEEeecCcHH
Confidence            35789999998  9999999999999988765  5444433

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=88.25  E-value=0.62  Score=51.54  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=33.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchh---hHHHHHhhC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKD---DYEKLKLRI  507 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~---~~~~l~~~~  507 (639)
                      ..+.|+++|++|  -||+++|++|+++|. +|.+  |+.+   +.+++.+++
T Consensus       258 ~~~~vLITGgtG--gIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l  307 (511)
T 2z5l_A          258 PSGTVLITGGMG--AIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEEL  307 (511)
T ss_dssp             CCSEEEEETTTS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHH
Confidence            457899999998  999999999999998 4666  6543   345554443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=88.23  E-value=0.71  Score=48.01  Aligned_cols=64  Identities=19%  Similarity=0.276  Sum_probs=44.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      .+|.++|| |  .+|.++|..|+++|. +|.+  +++++++.....+...     .... +.. +++++ ++++++|.
T Consensus         5 ~kI~VIGa-G--~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~-i~~t~d~~al~~aD~Vi~   78 (322)
T 1t2d_A            5 AKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK-VSGSNTYDDLAGADVVIV   78 (322)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCC-EEEECCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcE-EEECCCHHHhCCCCEEEE
Confidence            57999999 7  999999999999898 8777  7777777544443221     1112 333 45766 88888763

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=88.23  E-value=0.55  Score=54.26  Aligned_cols=41  Identities=15%  Similarity=0.044  Sum_probs=34.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .-++|.|+|+-   .+|+++|..|++.|.+|++  ++++..++.++
T Consensus       311 ~~~kV~VIGaG---~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~  353 (725)
T 2wtb_A          311 KIKKVAIIGGG---LMGSGIATALILSNYPVILKEVNEKFLEAGIG  353 (725)
T ss_dssp             CCCCEEEECCS---HHHHHHHHHHHTTTCCEEEECSSHHHHHHHHH
T ss_pred             cCcEEEEEcCC---HhhHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            34679999985   9999999999999999999  88887776543

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=88.22  E-value=0.7  Score=48.71  Aligned_cols=91  Identities=13%  Similarity=0.073  Sum_probs=60.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCccc------ccceeeec-ccc-c-cceeEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPVEA------QHNLVLST-SYA-A-HKTKIW  529 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~~~------~~~l~~~~-~~~-~-~~~~vw  529 (639)
                      ...+|.++|+-   .+|.++|..|++.|.+|++  |++++.+.++++ ....+      ..+ +..+ +++ + ++++++
T Consensus        28 ~~mkI~VIGaG---~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~-i~~t~d~~ea~~~aDvV  103 (356)
T 3k96_A           28 FKHPIAILGAG---SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPET-LKAYCDLKASLEGVTDI  103 (356)
T ss_dssp             CCSCEEEECCS---HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTT-EEEESCHHHHHTTCCEE
T ss_pred             cCCeEEEECcc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCC-eEEECCHHHHHhcCCEE
Confidence            34579999984   9999999999999999999  888999999876 22111      112 2233 465 3 778776


Q ss_pred             EEc-------CcCChhhhhcCCCCceeecccc-cCC
Q 006607          530 LVG-------DDLTGKEQARAPKGTIFIPYTQ-IPP  557 (639)
Q Consensus       530 ivg-------~~~~~~~q~~a~~G~~f~~~~~-~~~  557 (639)
                      |+-       +.++. =....++|+.++..+. +++
T Consensus       104 ilaVp~~~~~~vl~~-i~~~l~~~~ivvs~~kGi~~  138 (356)
T 3k96_A          104 LIVVPSFAFHEVITR-MKPLIDAKTRIAWGTKGLAK  138 (356)
T ss_dssp             EECCCHHHHHHHHHH-HGGGCCTTCEEEECCCSCBT
T ss_pred             EECCCHHHHHHHHHH-HHHhcCCCCEEEEEeCCCCc
Confidence            631       11110 0123678998888766 554

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=88.19  E-value=1.3  Score=44.16  Aligned_cols=86  Identities=17%  Similarity=0.118  Sum_probs=54.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccccceeeeccccc--c-ceeEEEEcC--c
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H-KTKIWLVGD--D  534 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~-~~~vwivg~--~  534 (639)
                      ++|.++| .|  .+|+++|+.|.+.|.  +|.+  +++++.+.+++. +...    ...+++++  + +++++|+--  .
T Consensus         2 ~~I~iIG-~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~~----~~~~~~~~~~~~~aDvVilavp~~   73 (281)
T 2g5c_A            2 QNVLIVG-VG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIID----EGTTSIAKVEDFSPDFVMLSSPVR   73 (281)
T ss_dssp             CEEEEES-CS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCS----EEESCGGGGGGTCCSEEEECSCHH
T ss_pred             cEEEEEe-cC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CCcc----cccCCHHHHhcCCCCEEEEcCCHH
Confidence            3689999 56  999999999999998  8888  778888877643 1110    01234543  6 777766311  1


Q ss_pred             CCh---hhh-hcCCCCceeecccccCC
Q 006607          535 LTG---KEQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       535 ~~~---~~q-~~a~~G~~f~~~~~~~~  557 (639)
                      ...   ++. ..+++|+++++.+.+++
T Consensus        74 ~~~~v~~~l~~~l~~~~iv~~~~~~~~  100 (281)
T 2g5c_A           74 TFREIAKKLSYILSEDATVTDQGSVKG  100 (281)
T ss_dssp             HHHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             HHHHHHHHHHhhCCCCcEEEECCCCcH
Confidence            100   011 23678999998876654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=88.16  E-value=0.48  Score=48.42  Aligned_cols=54  Identities=26%  Similarity=0.313  Sum_probs=41.0

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          450 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       450 ltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +||+..++.     +..+..+|++.|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       133 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          133 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             HHHHHHHHHHHhcCcCCCCceEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            356655543     333433699999998  9999999998889999877  77888887764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=88.14  E-value=0.47  Score=44.21  Aligned_cols=41  Identities=17%  Similarity=0.218  Sum_probs=35.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~  506 (639)
                      ..+|+++|. |  .+|+.+|+.|.+. |.+|++  +++++.+.+++.
T Consensus        39 ~~~v~IiG~-G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~   82 (183)
T 3c85_A           39 HAQVLILGM-G--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE   82 (183)
T ss_dssp             TCSEEEECC-S--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT
T ss_pred             CCcEEEECC-C--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC
Confidence            457999995 6  9999999999998 999988  888888887654

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=88.04  E-value=0.36  Score=47.60  Aligned_cols=59  Identities=8%  Similarity=0.186  Sum_probs=43.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc----EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI----KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~----~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv  531 (639)
                      .+|.++|+ |  .+|+++|+.|.+.|.    +|.+  |++++.++++++.+..      ..++.++  ++++++|+
T Consensus         3 ~~i~iIG~-G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~------~~~~~~e~~~~aDvVil   69 (247)
T 3gt0_A            3 KQIGFIGC-G--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLT------TTTDNNEVAKNADILIL   69 (247)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCE------ECSCHHHHHHHCSEEEE
T ss_pred             CeEEEECc-c--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCE------EeCChHHHHHhCCEEEE
Confidence            46899994 5  999999999999998    8888  8899999887653211      1223443  56677663

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=88.00  E-value=0.72  Score=47.24  Aligned_cols=86  Identities=10%  Similarity=0.125  Sum_probs=55.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecc------ccc----cceeEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS------YAA----HKTKIW  529 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~------~~~----~~~~vw  529 (639)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++.+.   .+..++      +.+    ...+++
T Consensus       145 ~g~~vlV~Ga~g--giG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~~---~~d~~~~~~~~~i~~~~~~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAG--GMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCHH---TINYSTQDFAEVVREITGGKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCHHHHHHHHHHhCCCCCeEE
Confidence            456899999998  9999999999999999888  88888887765 33221   112221      111    245776


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 006607          530 L--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       530 i--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      |  +|...-.+-.+.+.+|-.++.+.
T Consensus       219 i~~~g~~~~~~~~~~l~~~G~iv~~g  244 (333)
T 1wly_A          219 YDSIGKDTLQKSLDCLRPRGMCAAYG  244 (333)
T ss_dssp             EECSCTTTHHHHHHTEEEEEEEEECC
T ss_pred             EECCcHHHHHHHHHhhccCCEEEEEe
Confidence            6  55422233334455666677666

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=87.99  E-value=0.29  Score=50.99  Aligned_cols=63  Identities=17%  Similarity=0.268  Sum_probs=42.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc-----cccceeeec-cccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLST-SYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~~-~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .||+++|..|++.|.  ++.+  +++++.+-...++...     ...+ +..+ .+++ ++++++|+
T Consensus         2 kv~ViGa-G--~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~-v~~~~~~~a~~~aDvVii   75 (314)
T 3nep_X            2 KVTVIGA-G--NVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTR-VTGTNDYGPTEDSDVCII   75 (314)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCE-EEEESSSGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcE-EEECCCHHHhCCCCEEEE
Confidence            5899997 7  999999999998887  7777  6677666433332221     1122 2222 4666 88988775

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=87.96  E-value=0.84  Score=47.10  Aligned_cols=54  Identities=13%  Similarity=0.100  Sum_probs=41.4

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          450 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       450 ltaa~v~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .||.-.++... +..+.|+++|++|  -||+++++.+...|.+|..  +++++.+.+++
T Consensus       156 ~ta~~~l~~~~~~~g~~vlV~Ga~g--giG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~  212 (347)
T 2hcy_A          156 ITVYKALKSANLMAGHWVAISGAAG--GLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS  212 (347)
T ss_dssp             HHHHHHHHTTTCCTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence            34444555442 3456899999998  9999999999999999987  78888876654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=87.93  E-value=0.62  Score=51.47  Aligned_cols=43  Identities=19%  Similarity=0.276  Sum_probs=33.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc---hhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC---KDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~---~~~~~~l~~~~  507 (639)
                      .+.|+++|++|  -||+++|++|+++|. +|.+  |+   .+..+++.+++
T Consensus       239 ~~~vLITGgsg--GIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l  287 (496)
T 3mje_A          239 HGSVLVTGGTG--GIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAEL  287 (496)
T ss_dssp             CSEEEEETCSS--HHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHH
T ss_pred             CCEEEEECCCC--chHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHH
Confidence            37899999998  999999999999998 6666  53   33455555553

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=87.92  E-value=0.55  Score=49.00  Aligned_cols=64  Identities=14%  Similarity=0.195  Sum_probs=43.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      .+|.++|+ |  .+|+++|..|++.|. ++.+  +++++.+....++...     .... +.. +++++ ++++++|+
T Consensus         6 ~kI~iiGa-G--~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~-v~~t~d~~a~~~aDvVIi   79 (321)
T 3p7m_A            6 KKITLVGA-G--NIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFK-VRGTNDYKDLENSDVVIV   79 (321)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcE-EEEcCCHHHHCCCCEEEE
Confidence            57999996 7  999999999998888 8877  7777766444333221     1222 222 34666 88888664

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=87.90  E-value=1.3  Score=45.67  Aligned_cols=87  Identities=13%  Similarity=0.073  Sum_probs=55.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec-c----ccc----cceeEE
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-S----YAA----HKTKIW  529 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~-~----~~~----~~~~vw  529 (639)
                      +..+.|+++|++|  -||.++++.+...|.+|..  +++++.+.+++. +.+.-   +... +    +++    +..+++
T Consensus       158 ~~g~~VlV~Gasg--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~v---~~~~~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          158 RAGETVLVLGAAG--GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV-GADIV---LPLEEGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             CTTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSEE---EESSTTHHHHHHHHTTTSCEEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcEE---ecCchhHHHHHHHHhCCCCceEE
Confidence            3467899999998  9999999999999999988  788888877653 32221   1111 1    111    246777


Q ss_pred             E--EcCcCChhhhhcCCCCceeeccc
Q 006607          530 L--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       530 i--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      +  +|...-.+-.+.+.+|-.++.+.
T Consensus       232 id~~g~~~~~~~~~~l~~~G~iv~~G  257 (342)
T 4eye_A          232 VDPIGGPAFDDAVRTLASEGRLLVVG  257 (342)
T ss_dssp             EESCC--CHHHHHHTEEEEEEEEEC-
T ss_pred             EECCchhHHHHHHHhhcCCCEEEEEE
Confidence            7  55443344444556666676665

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=87.88  E-value=1  Score=45.81  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=31.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~  501 (639)
                      ...+|.++|+ |  .+|.++|..|++.|.  +|++  +++++.+
T Consensus         6 ~~mkI~IiGa-G--~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~   46 (319)
T 1lld_A            6 KPTKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVE   46 (319)
T ss_dssp             -CCEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CCCEEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence            3458999999 7  999999999999998  8988  7776765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=87.87  E-value=0.79  Score=47.24  Aligned_cols=53  Identities=19%  Similarity=0.133  Sum_probs=41.3

Q ss_pred             HHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          451 AAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       451 taa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ||+-.++..  .+..+.|+++|++|  -||.++++.+...|.+|..  +++++.+.+++
T Consensus       153 ta~~al~~~~~~~~g~~vlV~Gasg--~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~  209 (343)
T 2eih_A          153 TAWQMVVDKLGVRPGDDVLVMAAGS--GVSVAAIQIAKLFGARVIATAGSEDKLRRAKA  209 (343)
T ss_dssp             HHHHHHTTTSCCCTTCEEEECSTTS--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            444445442  23456899999998  9999999999999999887  88888888764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=87.85  E-value=1.1  Score=45.85  Aligned_cols=64  Identities=16%  Similarity=0.072  Sum_probs=43.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcccc-cceeee--ccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEAQ-HNLVLS--TSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~~-~~l~~~--~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .+|.++|..|++.|.  +|.+  +++++.+....++..... ..-+.+  +++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi   73 (304)
T 2v6b_A            2 KVGVVGT-G--FVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVIL   73 (304)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEE
Confidence            6899999 7  999999999999998  8888  777766654444322210 000122  34555 78877664

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=87.83  E-value=0.73  Score=48.10  Aligned_cols=83  Identities=8%  Similarity=0.081  Sum_probs=56.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  532 (639)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++ +..++. +       +..+++++  ++++++++-      
T Consensus       150 g~~vgIIG~-G--~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~-g-------~~~~~l~~~l~~aDvVil~vp~~~~  217 (334)
T 2dbq_A          150 GKTIGIIGL-G--RIGQAIAKRAKGFNMRILYYSRTRKE-EVEREL-N-------AEFKPLEDLLRESDFVVLAVPLTRE  217 (334)
T ss_dssp             TCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHH-C-------CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHhCCCEEEEECCCcch-hhHhhc-C-------cccCCHHHHHhhCCEEEECCCCChH
Confidence            457999996 5  9999999999999999998  55555 333221 1       11234443  566665521      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCC
Q 006607          533 --DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       533 --~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                        ..++.+....+++|++++..++.++
T Consensus       218 t~~~i~~~~~~~mk~~ailIn~srg~~  244 (334)
T 2dbq_A          218 TYHLINEERLKLMKKTAILINIARGKV  244 (334)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred             HHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence              2344455667899999999998443

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=87.74  E-value=0.63  Score=45.93  Aligned_cols=83  Identities=16%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh--------------HHHHHhhCCcccccceeeeccccc--
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--------------YEKLKLRIPVEAQHNLVLSTSYAA--  523 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~--------------~~~l~~~~~~~~~~~l~~~~~~~~--  523 (639)
                      ..++|.++|+-   .+|+++|+.|.+.|.+|++  |++++              .+++.++.+.      ...++.++  
T Consensus        18 ~~~kIgiIG~G---~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLGTG---TVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH------VHLAAFADVA   88 (245)
T ss_dssp             -CCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTT------CEEEEHHHHH
T ss_pred             CCCeEEEECCC---HHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc------eeccCHHHHH
Confidence            46789999954   9999999999999999999  77776              5555544321      12334443  


Q ss_pred             cceeEEEE--cCcCChh---hh-hcCCCCceeeccc
Q 006607          524 HKTKIWLV--GDDLTGK---EQ-ARAPKGTIFIPYT  553 (639)
Q Consensus       524 ~~~~vwiv--g~~~~~~---~q-~~a~~G~~f~~~~  553 (639)
                      ++++++|+  -..-..+   +. ....+|+++++.+
T Consensus        89 ~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s  124 (245)
T 3dtt_A           89 AGAELVVNATEGASSIAALTAAGAENLAGKILVDIA  124 (245)
T ss_dssp             HHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred             hcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence            66777662  1110011   11 1123899999998

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=87.63  E-value=0.38  Score=49.29  Aligned_cols=33  Identities=18%  Similarity=0.165  Sum_probs=27.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      +.|+|+|++|  -||+++|+.|.++|.+|.+  |+.+
T Consensus         2 ~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~   36 (372)
T 1db3_A            2 KVALITGVTG--QDGSYLAEFLLEKGYEVHGIKRRAS   36 (372)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEECC---
T ss_pred             CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEECCCc
Confidence            4699999999  9999999999999999988  5543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=87.59  E-value=0.91  Score=46.89  Aligned_cols=42  Identities=17%  Similarity=0.130  Sum_probs=36.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|++.|++|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       150 ~g~~VlV~gg~G--~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~  193 (346)
T 3fbg_A          150 EGKTLLIINGAG--GVGSIATQIAKAYGLRVITTASRNETIEWTKK  193 (346)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred             CCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            456899999998  9999999999999999988  77888888776

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=87.54  E-value=0.9  Score=46.17  Aligned_cols=86  Identities=15%  Similarity=0.209  Sum_probs=56.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCcCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLT  536 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~  536 (639)
                      ..+|.++|+ |  .+|+++|+.|.+.|.+|.+  |++++.+++++. +  .    ....+.++  ++++++|+  .+.-.
T Consensus        30 ~~~I~iIG~-G--~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g--~----~~~~~~~~~~~~~DvVi~av~~~~~   99 (316)
T 2uyy_A           30 DKKIGFLGL-G--LMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQE-G--A----RLGRTPAEVVSTCDITFACVSDPKA   99 (316)
T ss_dssp             SSCEEEECC-S--HHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHT-T--C----EECSCHHHHHHHCSEEEECCSSHHH
T ss_pred             CCeEEEEcc-c--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHc-C--C----EEcCCHHHHHhcCCEEEEeCCCHHH
Confidence            357999996 6  9999999999999999988  888888888763 1  0    11223432  56677653  21100


Q ss_pred             hhh--------hhcCCCCceeecccccCCc
Q 006607          537 GKE--------QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       537 ~~~--------q~~a~~G~~f~~~~~~~~~  558 (639)
                      -++        ...+++|+++++.+..++.
T Consensus       100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~  129 (316)
T 2uyy_A          100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDAD  129 (316)
T ss_dssp             HHHHHHSTTCGGGGCCTTCEEEECSCCCHH
T ss_pred             HHHHHcCchhHhhcCCCCCEEEECCCCCHH
Confidence            011        1346789999988876653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=87.54  E-value=0.7  Score=47.82  Aligned_cols=44  Identities=9%  Similarity=0.100  Sum_probs=38.7

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.|+++|++|  -||.++++.+...|. +|..  +++++.+.++++++.
T Consensus       162 ~~vlI~Gasg--giG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~  208 (357)
T 2zb4_A          162 KTMVVSGAAG--ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF  208 (357)
T ss_dssp             CEEEESSTTB--HHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC
T ss_pred             cEEEEECCCc--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence            7899999998  999999999999999 8887  788899988876654

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=87.48  E-value=0.28  Score=55.56  Aligned_cols=30  Identities=17%  Similarity=0.248  Sum_probs=28.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+|+||+|  -||+++|+.|.++|.+|.+
T Consensus        11 ~~~ilVTGatG--~IG~~l~~~L~~~G~~V~~   40 (699)
T 1z45_A           11 SKIVLVTGGAG--YIGSHTVVELIENGYDCVV   40 (699)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999999988

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=87.47  E-value=0.81  Score=46.76  Aligned_cols=98  Identities=11%  Similarity=0.093  Sum_probs=61.0

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c---
Q 006607          450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S---  520 (639)
Q Consensus       450 ltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~---  520 (639)
                      +||+..+...  .+..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++. +.+..   +..+  +   
T Consensus       126 ~ta~~~l~~~~~~~~g~~VlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~~~---~~~~~~~~~~  199 (325)
T 3jyn_A          126 LTVQYLLRQTYQVKPGEIILFHAAAG--GVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL-GAWET---IDYSHEDVAK  199 (325)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSEE---EETTTSCHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCEE---EeCCCccHHH
Confidence            3444444443  23457899999998  9999999999999999987  788888877643 32211   1111  1   


Q ss_pred             -ccc----cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          521 -YAA----HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       521 -~~~----~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                       +.+    ...++++  +|...-..-.+.+.+|-.++.+.
T Consensus       200 ~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g  239 (325)
T 3jyn_A          200 RVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFG  239 (325)
T ss_dssp             HHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECC
T ss_pred             HHHHHhCCCCceEEEECCChHHHHHHHHHhcCCCEEEEEe
Confidence             111    3457766  55433333344556666666665

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=87.45  E-value=1.9  Score=46.93  Aligned_cols=86  Identities=17%  Similarity=0.179  Sum_probs=56.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc--------------ccccceeeec-cccc-c
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV--------------EAQHNLVLST-SYAA-H  524 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~--------------~~~~~l~~~~-~~~~-~  524 (639)
                      .++|.|+|+-   .+|+++|..|++.|.+|++  +++++.++.++.+..              +....+..++ ++++ +
T Consensus        37 ~~kV~VIGaG---~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~  113 (463)
T 1zcj_A           37 VSSVGVLGLG---TMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS  113 (463)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT
T ss_pred             CCEEEEECcC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC
Confidence            4579999985   9999999999999999999  788888776553211              0111112333 4655 7


Q ss_pred             ceeEEE--EcCcCChhh-----h-hcCCCCceeec
Q 006607          525 KTKIWL--VGDDLTGKE-----Q-ARAPKGTIFIP  551 (639)
Q Consensus       525 ~~~vwi--vg~~~~~~~-----q-~~a~~G~~f~~  551 (639)
                      +++++|  |.+.++-++     . ..+++|++++.
T Consensus       114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s  148 (463)
T 1zcj_A          114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT  148 (463)
T ss_dssp             TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence            887766  433221111     1 24688999886

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=87.36  E-value=0.38  Score=48.97  Aligned_cols=30  Identities=23%  Similarity=0.359  Sum_probs=27.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      -+.|+|+||+|  -||+++++.|.++|.+|..
T Consensus        21 ~~~vlVTGatG--~iG~~l~~~L~~~g~~V~~   50 (333)
T 2q1w_A           21 MKKVFITGICG--QIGSHIAELLLERGDKVVG   50 (333)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCCCEEEE
Confidence            35799999999  9999999999999999988

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=87.34  E-value=1.2  Score=45.48  Aligned_cols=57  Identities=21%  Similarity=0.298  Sum_probs=42.4

Q ss_pred             hHHHHHHhc-----CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          450 LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       450 ltaa~v~~~-----i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +||+..++.     +..+..+|++.|++|  -||.+.++.+...|.+|..  +++++++.+++ ++.
T Consensus       132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G--~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa  195 (328)
T 1xa0_A          132 FTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA  195 (328)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC
T ss_pred             HHHHHHHHHHhhcCCCCCCceEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCC
Confidence            356655543     333443699999998  9999999998889999877  77888888764 443

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=87.31  E-value=0.79  Score=47.33  Aligned_cols=82  Identities=10%  Similarity=0.126  Sum_probs=56.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc-----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  532 (639)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++ +.. .+.+.+       ..++++  +.++++++-     
T Consensus       141 ~g~~vgIiG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~-------~~~l~ell~~aDvV~l~~p~~~  208 (307)
T 1wwk_A          141 EGKTIGIIGF-G--RIGYQVAKIANALGMNILLYDPYPNE-ERA-KEVNGK-------FVDLETLLKESDVVTIHVPLVE  208 (307)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCH-HHH-HHTTCE-------ECCHHHHHHHCSEEEECCCCST
T ss_pred             CCceEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCCCh-hhH-hhcCcc-------ccCHHHHHhhCCEEEEecCCCh
Confidence            3567999997 5  9999999999999999988  55544 322 222211       123443  566665532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 006607          533 ---DDLTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       533 ---~~~~~~~q~~a~~G~~f~~~~~~  555 (639)
                         ..++.+....+++|++++.+++-
T Consensus       209 ~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          209 STYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             TTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             HHhhhcCHHHHhcCCCCeEEEECCCC
Confidence               23456677889999999999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=87.23  E-value=1.6  Score=45.22  Aligned_cols=86  Identities=15%  Similarity=0.155  Sum_probs=55.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--ccc----c---cceeEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA----A---HKTKIWL  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~----~---~~~~vwi  530 (639)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++. +.+..   +..+  ++.    +   ...++++
T Consensus       167 ~g~~VlV~Gg~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~~---~~~~~~~~~~~~~~~~~~g~Dvvi  240 (353)
T 4dup_A          167 EGESVLIHGGTS--GIGTTAIQLARAFGAEVYATAGSTGKCEACERL-GAKRG---INYRSEDFAAVIKAETGQGVDIIL  240 (353)
T ss_dssp             TTCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSEE---EETTTSCHHHHHHHHHSSCEEEEE
T ss_pred             CCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCCEE---EeCCchHHHHHHHHHhCCCceEEE
Confidence            457899999998  9999999999999999988  789999887653 32221   1122  111    1   2457766


Q ss_pred             --EcCcCChhhhhcCCCCceeeccc
Q 006607          531 --VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       531 --vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                        +|...-..-.+.+.+|-.++.+.
T Consensus       241 d~~g~~~~~~~~~~l~~~G~iv~~g  265 (353)
T 4dup_A          241 DMIGAAYFERNIASLAKDGCLSIIA  265 (353)
T ss_dssp             ESCCGGGHHHHHHTEEEEEEEEECC
T ss_pred             ECCCHHHHHHHHHHhccCCEEEEEE
Confidence              55433333344455555566555

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=87.21  E-value=0.46  Score=47.01  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=28.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      ++|+|+| +|  -||+++++.|.++|.+|..  |+.++
T Consensus         4 ~~ilVtG-aG--~iG~~l~~~L~~~g~~V~~~~r~~~~   38 (286)
T 3gpi_A            4 SKILIAG-CG--DLGLELARRLTAQGHEVTGLRRSAQP   38 (286)
T ss_dssp             CCEEEEC-CS--HHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred             CcEEEEC-CC--HHHHHHHHHHHHCCCEEEEEeCCccc
Confidence            4799999 58  9999999999999999988  66554

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=87.16  E-value=0.56  Score=49.15  Aligned_cols=80  Identities=13%  Similarity=0.177  Sum_probs=56.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|-++|--   .||+++|+.|...|.+|+.  |+.++.+    ..  +   ......++++  ++++++++       
T Consensus       140 g~tvGIIGlG---~IG~~vA~~l~~~G~~V~~~dr~~~~~~----~~--~---~~~~~~~l~ell~~aDvV~l~lPlt~~  207 (324)
T 3hg7_A          140 GRTLLILGTG---SIGQHIAHTGKHFGMKVLGVSRSGRERA----GF--D---QVYQLPALNKMLAQADVIVSVLPATRE  207 (324)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCCCT----TC--S---EEECGGGHHHHHHTCSEEEECCCCCSS
T ss_pred             cceEEEEEEC---HHHHHHHHHHHhCCCEEEEEcCChHHhh----hh--h---cccccCCHHHHHhhCCEEEEeCCCCHH
Confidence            5689999986   9999999999999999998  3332111    01  1   1012334554  67777662       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                       -..++.+....+++|+++|.++|
T Consensus       208 T~~li~~~~l~~mk~gailIN~aR  231 (324)
T 3hg7_A          208 THHLFTASRFEHCKPGAILFNVGR  231 (324)
T ss_dssp             STTSBCTTTTTCSCTTCEEEECSC
T ss_pred             HHHHhHHHHHhcCCCCcEEEECCC
Confidence             23467788888999999999999

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=87.16  E-value=0.5  Score=50.00  Aligned_cols=26  Identities=12%  Similarity=0.286  Sum_probs=22.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI  490 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~  490 (639)
                      .-+|.|+||+|  .||++++..|++...
T Consensus        24 ~vKVaViGAaG--~IG~~la~~la~~~l   49 (345)
T 4h7p_A           24 AVKVAVTGAAG--QIGYALVPLIARGAL   49 (345)
T ss_dssp             CEEEEEESTTS--HHHHHHHHHHHHTTT
T ss_pred             CCEEEEECcCc--HHHHHHHHHHHhccc
Confidence            34899999999  999999999986543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=87.16  E-value=0.72  Score=46.59  Aligned_cols=28  Identities=14%  Similarity=0.145  Sum_probs=25.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc---C---cEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM---G---IKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~---~---~~v~~  494 (639)
                      +|+|+|++|  -||+++++.|.++   |   .+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~~~~g~~~~~V~~   35 (337)
T 1r6d_A            2 RLLVTGGAG--FIGSHFVRQLLAGAYPDVPADEVIV   35 (337)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTSCTTSCCSEEEE
T ss_pred             eEEEECCcc--HHHHHHHHHHHhhhcCCCCceEEEE
Confidence            589999999  9999999999986   7   78887

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=87.14  E-value=1.2  Score=48.13  Aligned_cols=96  Identities=10%  Similarity=0.197  Sum_probs=66.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc---EEEecchhhHHHHHhhCCcccccceeeeccccc-cceeEEE----Ec--
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI---KVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWL----VG--  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~---~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwi----vg--  532 (639)
                      ..+|+|.|++|  -+|...++.+.+-|.   +|+..+...-    .+ +..          +++ ++++++|    +|  
T Consensus       214 ~~kV~ViG~~G--~vG~~A~~~a~~lGa~~~~V~v~D~~~~----~~-g~~----------~~~i~~aDivIn~vlig~~  276 (394)
T 2qrj_A          214 KPTVLIIGALG--RCGSGAIDLLHKVGIPDANILKWDIKET----SR-GGP----------FDEIPQADIFINCIYLSKP  276 (394)
T ss_dssp             CCCEEEETTTS--HHHHHHHHHHHHTTCCGGGEEEECHHHH----TT-CSC----------CTHHHHSSEEEECCCCCSS
T ss_pred             CCeEEEEcCCC--HHHHHHHHHHHhCCCCcCceEEeecccc----cc-CCc----------hhhHhhCCEEEECcCcCCC
Confidence            56899999999  999999999999997   8888222210    00 110          122 3455555    22  


Q ss_pred             --CcCChhhhhcC-CCCceeecccccCCc------CCCCCceeecCCccccCC
Q 006607          533 --DDLTGKEQARA-PKGTIFIPYTQIPPR------KLRKDCFYHSTPAMIIPP  576 (639)
Q Consensus       533 --~~~~~~~q~~a-~~G~~f~~~~~~~~~------~~R~dc~y~~~~a~~~P~  576 (639)
                        +.++.|+.+++ +||++.||+| .++-      +....|+-++.|.....+
T Consensus       277 aP~Lvt~e~v~~m~k~gsVIVDVA-~D~GG~~et~~f~~~~Tt~~~P~~~~~g  328 (394)
T 2qrj_A          277 IAPFTNMEKLNNPNRRLRTVVDVS-ADTTNPHNPIPIYTVATVFNKPTVLVPT  328 (394)
T ss_dssp             CCCSCCHHHHCCTTCCCCEEEETT-CCTTCTTCSSCSCCCCCBTTBCCEEECC
T ss_pred             CCcccCHHHHhcCcCCCeEEEEEe-cCCCCCcCcccccccCCccCCCEEEECC
Confidence              34899999999 9999999999 7764      333347777777766554

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=87.12  E-value=0.48  Score=48.25  Aligned_cols=54  Identities=22%  Similarity=0.267  Sum_probs=41.3

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +||+..++.+     ..+..+|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++
T Consensus       129 ~ta~~al~~~~~~~~~~~~g~VlV~Ga~G--~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          129 FTAMLCVMALEDAGIRPQDGEVVVTGASG--GVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHHhhhcccCCCCCeEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            4555555543     22332499999998  9999999999999999988  78888888865

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=87.12  E-value=1.1  Score=49.74  Aligned_cols=86  Identities=14%  Similarity=0.115  Sum_probs=60.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec-
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG-  532 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg-  532 (639)
                      ....++|.++|. |  .||+.+|+.|...|.+|+.  ++.++.+..++. +.+.       .++++  +.++++|  +| 
T Consensus       271 ~l~GktV~IiG~-G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~-Ga~~-------~~l~e~l~~aDvVi~atgt  339 (494)
T 3ce6_A          271 LIGGKKVLICGY-G--DVGKGCAEAMKGQGARVSVTEIDPINALQAMME-GFDV-------VTVEEAIGDADIVVTATGN  339 (494)
T ss_dssp             CCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE-------CCHHHHGGGCSEEEECSSS
T ss_pred             CCCcCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCEE-------ecHHHHHhCCCEEEECCCC
Confidence            345678999997 7  9999999999999999988  666666544332 2211       12222  4566655  33 


Q ss_pred             -CcCChhhhhcCCCCceeecccccC
Q 006607          533 -DDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       533 -~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                       ..++.+....+++|++++.+++++
T Consensus       340 ~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          340 KDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             SCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             HHHHHHHHHHhcCCCcEEEEeCCCC
Confidence             446667888899999999998744

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=86.98  E-value=0.53  Score=51.26  Aligned_cols=126  Identities=17%  Similarity=0.218  Sum_probs=77.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-CCc-cc----------ccceeeecccc-c-cc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-EA----------QHNLVLSTSYA-A-HK  525 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~~-~~~-~~----------~~~l~~~~~~~-~-~~  525 (639)
                      .+|.++|. |  .+|.++|..|++.  |.+|++  +++++.+.+++. .+. +.          ...+...++++ + ++
T Consensus         6 mkI~VIG~-G--~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~   82 (467)
T 2q3e_A            6 KKICCIGA-G--YVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE   82 (467)
T ss_dssp             CEEEEECC-S--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             cEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence            47999995 5  9999999999998  899998  889999988764 111 00          01222233555 3 66


Q ss_pred             eeEEE--EcCcCCh------------------hhhh-cCCCCceeecccccCCcC---C--------C--CCceeecCCc
Q 006607          526 TKIWL--VGDDLTG------------------KEQA-RAPKGTIFIPYTQIPPRK---L--------R--KDCFYHSTPA  571 (639)
Q Consensus       526 ~~vwi--vg~~~~~------------------~~q~-~a~~G~~f~~~~~~~~~~---~--------R--~dc~y~~~~a  571 (639)
                      ++++|  |++..+.                  ++.. .+++|+++++.|.++|..   +        +  .|+.+..+|.
T Consensus        83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe  162 (467)
T 2q3e_A           83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE  162 (467)
T ss_dssp             CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC
T ss_pred             CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH
Confidence            76655  5444432                  1222 368999999998888751   1        1  3555556665


Q ss_pred             cccCCCCccccccccccCcchhhhH
Q 006607          572 MIIPPSLSNMHSCENWLGRRVMSAW  596 (639)
Q Consensus       572 ~~~P~~~~~~~~~e~~~pr~~~~Ac  596 (639)
                      ..-|+...    -++.-|.|++.++
T Consensus       163 ~~~~G~~~----~d~~~~~rivvGg  183 (467)
T 2q3e_A          163 FLAEGTAI----KDLKNPDRVLIGG  183 (467)
T ss_dssp             CCCTTSHH----HHHHSCSCEEEEC
T ss_pred             Hhhcccch----hhccCCCEEEECC
Confidence            55555422    2344566665443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=86.97  E-value=1.1  Score=45.13  Aligned_cols=44  Identities=14%  Similarity=0.185  Sum_probs=37.5

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .+..+.|++.|++|  .||.++++.+...|.+|..  +++++.+.+++
T Consensus       123 ~~~g~~vlV~Ga~G--~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  168 (302)
T 1iz0_A          123 ARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA  168 (302)
T ss_dssp             CCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            45567899999998  9999999998899999887  78888887754

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=86.93  E-value=0.72  Score=48.66  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=56.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|.++|--   .||+++|+.|...|.+|+.  ++.++      +....     +...++++  ++++++++       
T Consensus       148 gktvgIiGlG---~IG~~vA~~l~~~G~~V~~~d~~~~~------~~~~~-----~~~~~l~ell~~aDvV~l~~Plt~~  213 (343)
T 2yq5_A          148 NLTVGLIGVG---HIGSAVAEIFSAMGAKVIAYDVAYNP------EFEPF-----LTYTDFDTVLKEADIVSLHTPLFPS  213 (343)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCG------GGTTT-----CEECCHHHHHHHCSEEEECCCCCTT
T ss_pred             CCeEEEEecC---HHHHHHHHHHhhCCCEEEEECCChhh------hhhcc-----ccccCHHHHHhcCCEEEEcCCCCHH
Confidence            5689999975   9999999999999999998  44332      11110     22225554  66766552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                       -..++.+....+++|+++|.++|
T Consensus       214 t~~li~~~~l~~mk~gailIN~aR  237 (343)
T 2yq5_A          214 TENMIGEKQLKEMKKSAYLINCAR  237 (343)
T ss_dssp             TTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             HHHHhhHHHHhhCCCCcEEEECCC
Confidence             23567788889999999999998

>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A

Probab=86.90  E-value=2.3  Score=44.29  Aligned_cols=163  Identities=17%  Similarity=0.178  Sum_probs=100.5

Q ss_pred             HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCChh---------HHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gnsl---------taa~v~  456 (639)
                      +.++|.+++.|+.    ++++|.+       .+..-+.+.|+|.         ..+++|+.|-+-         =..++.
T Consensus        61 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  140 (307)
T 2i6u_A           61 IAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIA  140 (307)
T ss_dssp             HHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHH
Confidence            4579999999975    3344443       3445667788876         356888887651         134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCCcccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +.... +..+|..+|.. .|-+++..+.+|++-|.+|.+-.++.|      .+..++...+.+.. +.++ +.+ + +++
T Consensus       141 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  218 (307)
T 2i6u_A          141 ERKGALRGLRLSYFGDG-ANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGAS-VTVTADAHAAAAGA  218 (307)
T ss_dssp             HHHSCCTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCeEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhcCC
Confidence            55432 45689999997 138999999999999999999333332      11111111222223 3334 465 4 889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCCc---CCCCCce-eecCCc
Q 006607          527 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +|+..+-|.+..++...+.- -.|-+| |++.+   ..++|+. .|.+|+
T Consensus       219 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~~~l~~a~~~ai~mH~lP~  267 (307)
T 2i6u_A          219 DVLVTDTWTSMGQENDGLDRVKPFRPF-QLNSRLLALADSDAIVLHCLPA  267 (307)
T ss_dssp             SEEEECCSSCTTCTTSCCCSSGGGGGG-CBCHHHHHHSCTTCEEEECSCC
T ss_pred             CEEEecceecCCcccchHHHHHHHhhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99998777765433222221 234445 37777   4567876 788886

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=86.82  E-value=1.1  Score=47.72  Aligned_cols=108  Identities=15%  Similarity=0.222  Sum_probs=68.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-Cc-cc---------ccceeeecccc-c-cceeEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EA---------QHNLVLSTSYA-A-HKTKIW  529 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~-~~-~~---------~~~l~~~~~~~-~-~~~~vw  529 (639)
                      +|.++|+ |  .+|.++|..|++ |.+|+.  +++++.+.+++.. +- +.         ..++...++.+ + ++++++
T Consensus         2 kI~VIG~-G--~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv   77 (402)
T 1dlj_A            2 KIAVAGS-G--YVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV   77 (402)
T ss_dssp             EEEEECC-S--HHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred             EEEEECC-C--HHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence            5889998 5  999999999999 999988  8899999998762 21 00         11212233454 3 667665


Q ss_pred             E--EcCcCCh--------------hhhhcCCCCceeecccccCCc---C----CCCCceeecCCccccCCC
Q 006607          530 L--VGDDLTG--------------KEQARAPKGTIFIPYTQIPPR---K----LRKDCFYHSTPAMIIPPS  577 (639)
Q Consensus       530 i--vg~~~~~--------------~~q~~a~~G~~f~~~~~~~~~---~----~R~dc~y~~~~a~~~P~~  577 (639)
                      |  |+...++              ++...+.+|++++.-|+++|.   +    +.++ .+..+|...-|+.
T Consensus        78 iiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G~  147 (402)
T 1dlj_A           78 IIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRESK  147 (402)
T ss_dssp             EECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTTS
T ss_pred             EEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCcc
Confidence            5  4443210              112225789999987888886   2    2233 4445566556665

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=86.79  E-value=0.5  Score=48.99  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=54.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc-----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  532 (639)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++.+              +...++++  +.++++++-     
T Consensus       143 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~~--------------~~~~~l~ell~~aDvV~l~~p~~~  205 (311)
T 2cuk_A          143 QGLTLGLVGM-G--RIGQAVAKRALAFGMRVVYHARTPKPLP--------------YPFLSLEELLKEADVVSLHTPLTP  205 (311)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSSS--------------SCBCCHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEEE-C--HHHHHHHHHHHHCCCEEEEECCCCcccc--------------cccCCHHHHHhhCCEEEEeCCCCh
Confidence            3467999996 5  9999999999999999988  4333221              11223433  566665532     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccC
Q 006607          533 ---DDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       533 ---~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                         ..++.+....+++|++++++++-+
T Consensus       206 ~t~~li~~~~l~~mk~ga~lin~srg~  232 (311)
T 2cuk_A          206 ETHRLLNRERLFAMKRGAILLNTARGA  232 (311)
T ss_dssp             TTTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHhhcCHHHHhhCCCCcEEEECCCCC
Confidence               335557788899999999999843

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=86.73  E-value=0.96  Score=46.33  Aligned_cols=87  Identities=16%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--c----ccc----cceeE
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--S----YAA----HKTKI  528 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~----~~~----~~~~v  528 (639)
                      +..+.|+++|++|  -||.++++.+...|.+|..  +++++++.+++ ++.+..   +..+  +    +++    ...++
T Consensus       147 ~~g~~vlV~Ga~g--~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~~---~~~~~~~~~~~~~~~~~~~g~D~  220 (334)
T 3qwb_A          147 KKGDYVLLFAAAG--GVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAEYL---INASKEDILRQVLKFTNGKGVDA  220 (334)
T ss_dssp             CTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSEE---EETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcEE---EeCCCchHHHHHHHHhCCCCceE
Confidence            3456899999998  9999999999999999988  88888886654 443221   1111  1    111    24577


Q ss_pred             EE--EcCcCChhhhhcCCCCceeeccc
Q 006607          529 WL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       529 wi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      ++  +|...-..-.+.+.+|-.++.+.
T Consensus       221 vid~~g~~~~~~~~~~l~~~G~iv~~G  247 (334)
T 3qwb_A          221 SFDSVGKDTFEISLAALKRKGVFVSFG  247 (334)
T ss_dssp             EEECCGGGGHHHHHHHEEEEEEEEECC
T ss_pred             EEECCChHHHHHHHHHhccCCEEEEEc
Confidence            66  55533333444556666666665

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=86.71  E-value=0.23  Score=51.72  Aligned_cols=80  Identities=16%  Similarity=0.217  Sum_probs=55.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|-++|.-   .||+++|+.|...|.+|+.  |+.+..+.    +  +.  . ....++++  ++++++++       
T Consensus       139 g~tvGIiG~G---~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~--~~--~-~~~~~l~ell~~aDiV~l~~Plt~~  206 (315)
T 3pp8_A          139 EFSVGIMGAG---VLGAKVAESLQAWGFPLRCWSRSRKSWPG----V--ES--Y-VGREELRAFLNQTRVLINLLPNTAQ  206 (315)
T ss_dssp             TCCEEEECCS---HHHHHHHHHHHTTTCCEEEEESSCCCCTT----C--EE--E-ESHHHHHHHHHTCSEEEECCCCCGG
T ss_pred             CCEEEEEeeC---HHHHHHHHHHHHCCCEEEEEcCCchhhhh----h--hh--h-cccCCHHHHHhhCCEEEEecCCchh
Confidence            5689999985   9999999999999999998  44332210    0  00  0 01124554  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                       -..++.+....+++|++++.++|
T Consensus       207 t~~li~~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          207 TVGIINSELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             GTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhhccHHHHhhCCCCCEEEECCC
Confidence             23466788889999999999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=86.68  E-value=0.9  Score=46.33  Aligned_cols=42  Identities=10%  Similarity=0.021  Sum_probs=36.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+++|++|  -||.++++.+.+.|.+|..  +++++.+.+++
T Consensus       140 ~g~~vlV~Ga~g--giG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~  183 (327)
T 1qor_A          140 PDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALK  183 (327)
T ss_dssp             TTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            456899999998  9999999999999999888  78888887765

>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}

Probab=86.66  E-value=2.4  Score=44.83  Aligned_cols=159  Identities=19%  Similarity=0.264  Sum_probs=97.1

Q ss_pred             HHHcCCcEEEecc----cccccccc-------cCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEELN-------RNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~ln-------~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.    +.++|.+-       ...-..+.|+|.         ..+|+|+.|-+         +=..++.
T Consensus        85 ~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  164 (339)
T 4a8t_A           85 MEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV  164 (339)
T ss_dssp             HHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHHCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEECCCCCcCcHHHHHHHHHHH
Confidence            4579999999985    44455443       334456778876         35689998754         1256788


Q ss_pred             hcCc----CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHh---hCCcccccceeeec-cccc-c
Q 006607          457 NSLP----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKL---RIPVEAQHNLVLST-SYAA-H  524 (639)
Q Consensus       457 ~~i~----~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~---~~~~~~~~~l~~~~-~~~~-~  524 (639)
                      +..|    -+..+|+++|..+  -+++..+.+|++-|.+|.+-.++.|+   .+.+   +..++.+.. +.++ +.++ +
T Consensus       165 e~~~~G~~l~glkva~vGD~~--rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~-v~~~~d~~av~  241 (339)
T 4a8t_A          165 EHLPEGKKLEDCKVVFVGDAT--QVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGS-FLVTDDASSVE  241 (339)
T ss_dssp             HTCCTTCCGGGCEEEEESSCC--HHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCE-EEEECCGGGGT
T ss_pred             HHhhcCCCCCCCEEEEECCCc--hhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCE-EEEECChhHHc
Confidence            8873    2456999999985  99999999999999999983333221   1111   111222223 3333 4446 7


Q ss_pred             ceeEEEEcCcCCh---hhh--hcCCCCceeec-ccccCCc---CCCCCce-eecCCc
Q 006607          525 KTKIWLVGDDLTG---KEQ--ARAPKGTIFIP-YTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       525 ~~~vwivg~~~~~---~~q--~~a~~G~~f~~-~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +++|+..+-|.+-   +||  ++..   .|-| | |+.++   ..++|+. .|.+|+
T Consensus       242 ~aDvvytd~w~smg~~~~~~~er~~---~~~~~y-~vt~ell~~ak~dai~mHcLPa  294 (339)
T 4a8t_A          242 GADFLYTDVWYGLYEAELSEEERMK---VFYPKY-QVNQEMMDRAGANCKFMHCLPA  294 (339)
T ss_dssp             TCSEEEECCSSCCTTSCCCHHHHHH---HHTTTT-CBCHHHHHHHCTTCEEEECSCC
T ss_pred             CCCEEEecCcccCCchhhhhHHHHH---Hhcccc-ccCHHHHHhcCCCcEEECCCCC
Confidence            8888777555431   221  1111   1334 4 47777   3567876 678885

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=86.65  E-value=0.46  Score=49.82  Aligned_cols=80  Identities=14%  Similarity=0.084  Sum_probs=55.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  532 (639)
                      .++|.++|. |  .||+++|+.|...|.+|+.  ++.++.+        +.    ....++++  ++++++++-      
T Consensus       164 g~~vgIIG~-G--~iG~~vA~~l~~~G~~V~~~dr~~~~~~--------g~----~~~~~l~ell~~aDvVil~vP~~~~  228 (333)
T 3ba1_A          164 GKRVGIIGL-G--RIGLAVAERAEAFDCPISYFSRSKKPNT--------NY----TYYGSVVELASNSDILVVACPLTPE  228 (333)
T ss_dssp             TCCEEEECC-S--HHHHHHHHHHHTTTCCEEEECSSCCTTC--------CS----EEESCHHHHHHTCSEEEECSCCCGG
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHHCCCEEEEECCCchhcc--------Cc----eecCCHHHHHhcCCEEEEecCCChH
Confidence            457999997 4  9999999999999999988  4433211        11    11234543  667776632      


Q ss_pred             --CcCChhhhhcCCCCceeecccccCC
Q 006607          533 --DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       533 --~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                        ..++.+....+++|++++.+++-++
T Consensus       229 t~~li~~~~l~~mk~gailIn~srG~~  255 (333)
T 3ba1_A          229 TTHIINREVIDALGPKGVLINIGRGPH  255 (333)
T ss_dssp             GTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred             HHHHhhHHHHhcCCCCCEEEECCCCch
Confidence              3445567778899999999999443

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=86.60  E-value=0.4  Score=47.34  Aligned_cols=28  Identities=11%  Similarity=0.236  Sum_probs=26.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+|+|+||  -||+++++.|.++|.+|..
T Consensus         7 ~ilVtGatG--~iG~~l~~~L~~~g~~V~~   34 (287)
T 3sc6_A            7 RVIITGANG--QLGKQLQEELNPEEYDIYP   34 (287)
T ss_dssp             EEEEESTTS--HHHHHHHHHSCTTTEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            799999999  9999999999999999988

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=86.56  E-value=1.3  Score=48.43  Aligned_cols=115  Identities=15%  Similarity=0.217  Sum_probs=74.0

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhh-CCc-cc----------ccceeeecccc-
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLR-IPV-EA----------QHNLVLSTSYA-  522 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~~-~~~-~~----------~~~l~~~~~~~-  522 (639)
                      |....+|.++|+-   .+|.++|..|++.  |.+|++  +++++.+.+++. .+. +.          ...+...++++ 
T Consensus         6 ~~~~mkI~VIG~G---~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~   82 (481)
T 2o3j_A            6 FGKVSKVVCVGAG---YVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPK   82 (481)
T ss_dssp             SCCCCEEEEECCS---TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHH
T ss_pred             CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHH
Confidence            3334589999975   9999999999988  789998  899999999864 211 01          01222333554 


Q ss_pred             c-cceeEEE--EcCcCCh------------------hh-hhcCCCCceeecccccCCc--C---------CC----CCce
Q 006607          523 A-HKTKIWL--VGDDLTG------------------KE-QARAPKGTIFIPYTQIPPR--K---------LR----KDCF  565 (639)
Q Consensus       523 ~-~~~~vwi--vg~~~~~------------------~~-q~~a~~G~~f~~~~~~~~~--~---------~R----~dc~  565 (639)
                      + ++++++|  |++..+.                  ++ ...+++|+++++-|.+||.  +         .+    .|+.
T Consensus        83 ~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~  162 (481)
T 2o3j_A           83 AIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQ  162 (481)
T ss_dssp             HHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEE
T ss_pred             HhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceE
Confidence            3 6676655  5454321                  11 1246889999998888875  1         22    3455


Q ss_pred             eecCCccccCCC
Q 006607          566 YHSTPAMIIPPS  577 (639)
Q Consensus       566 y~~~~a~~~P~~  577 (639)
                      +..+|...-|+.
T Consensus       163 v~~~Pe~~~~G~  174 (481)
T 2o3j_A          163 VLSNPEFLAEGT  174 (481)
T ss_dssp             EEECCCCCCTTC
T ss_pred             EEeCcccccccc
Confidence            666776656665

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=86.28  E-value=0.55  Score=46.60  Aligned_cols=28  Identities=11%  Similarity=0.312  Sum_probs=25.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~~  494 (639)
                      +|+|+|++|  -||+++++.|.++| .+|..
T Consensus         1 ~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   29 (310)
T 1eq2_A            1 MIIVTGGAG--FIGSNIVKALNDKGITDILV   29 (310)
T ss_dssp             CEEEETTTS--HHHHHHHHHHHTTTCCCEEE
T ss_pred             CEEEEcCcc--HHHHHHHHHHHHCCCcEEEE
Confidence            489999999  99999999999999 78877

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=86.25  E-value=0.5  Score=47.68  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+|+||+|  -||+++++.|.++|.+|..
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~   30 (347)
T 1orr_A            2 AKLLITGGCG--FLGSNLASFALSQGIDLIV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCc--hhHHHHHHHHHhCCCEEEE
Confidence            4699999999  9999999999999999988

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=86.09  E-value=0.69  Score=51.07  Aligned_cols=90  Identities=14%  Similarity=0.135  Sum_probs=60.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh-hCCcccccceeeeccccc--cc---eeEEE--Ec
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL-RIPVEAQHNLVLSTSYAA--HK---TKIWL--VG  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~--~~---~~vwi--vg  532 (639)
                      .++|.++|.-   .+|+++|+.|++.|.+|++  |++++.+++++ +.+ +  ..+...+++++  ++   ++++|  |-
T Consensus        10 ~~~IgvIGlG---~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~-~--~gi~~~~s~~e~v~~l~~aDvVil~Vp   83 (497)
T 2p4q_A           10 SADFGLIGLA---VMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAK-G--KSIIGATSIEDFISKLKRPRKVMLLVK   83 (497)
T ss_dssp             CCSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTT-T--SSEECCSSHHHHHHTSCSSCEEEECCC
T ss_pred             CCCEEEEeeH---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccccc-C--CCeEEeCCHHHHHhcCCCCCEEEEEcC
Confidence            4578999976   9999999999999999999  89999999987 433 1  22222334543  33   76655  21


Q ss_pred             C--cCCh--hhh-hcCCCCceeecccccCCc
Q 006607          533 D--DLTG--KEQ-ARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       533 ~--~~~~--~~q-~~a~~G~~f~~~~~~~~~  558 (639)
                      +  .+++  ++. ..+++|+++++.+...+.
T Consensus        84 ~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~  114 (497)
T 2p4q_A           84 AGAPVDALINQIVPLLEKGDIIIDGGNSHFP  114 (497)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHH
T ss_pred             ChHHHHHHHHHHHHhCCCCCEEEECCCCChh
Confidence            1  1111  112 246789999999886654

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=86.02  E-value=1.4  Score=43.62  Aligned_cols=81  Identities=10%  Similarity=0.056  Sum_probs=52.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCc----CC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDD----LT  536 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~----~~  536 (639)
                      +|.++|+ |  .+|+++|..|.+ |.+|.+  |++++.++++++   +.  .  ..+ .++  ++++++|+--.    +.
T Consensus         3 ~i~iiG~-G--~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~---g~--~--~~~-~~~~~~~~D~vi~~v~~~~~~~   70 (289)
T 2cvz_A            3 KVAFIGL-G--AMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE---FG--S--EAV-PLERVAEARVIFTCLPTTREVY   70 (289)
T ss_dssp             CEEEECC-S--TTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH---HC--C--EEC-CGGGGGGCSEEEECCSSHHHHH
T ss_pred             eEEEEcc-c--HHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC---CC--c--ccC-HHHHHhCCCEEEEeCCChHHHH
Confidence            5889997 5  999999999999 999988  888888888765   10  0  011 332  56666553111    11


Q ss_pred             h--hhh-hcCCCCceeecccccCC
Q 006607          537 G--KEQ-ARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       537 ~--~~q-~~a~~G~~f~~~~~~~~  557 (639)
                      .  ++. ..+++|+++++.+..++
T Consensus        71 ~v~~~l~~~l~~~~~vv~~s~~~~   94 (289)
T 2cvz_A           71 EVAEALYPYLREGTYWVDATSGEP   94 (289)
T ss_dssp             HHHHHHTTTCCTTEEEEECSCCCH
T ss_pred             HHHHHHHhhCCCCCEEEECCCCCH
Confidence            0  111 24678999988876554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=86.02  E-value=0.57  Score=52.86  Aligned_cols=45  Identities=13%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch---------hhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~---------~~~~~l~~~~~  508 (639)
                      +.+.|+++|+++  -||+++|+.|+++|.+|.+  ++.         ++.+++.+++.
T Consensus         7 ~gkvalVTGas~--GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~   62 (604)
T 2et6_A            7 KDKVVIITGAGG--GLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV   62 (604)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHH
Confidence            346789999997  9999999999999999998  433         66777766653

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=86.01  E-value=1.1  Score=47.63  Aligned_cols=82  Identities=15%  Similarity=0.142  Sum_probs=55.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh-hHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~-~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      ..++|-++|--   .||+++|+.|...|.+|+..++. +-+..+ +.+.       ...++++  +.++++++       
T Consensus       175 ~gktvGIIGlG---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~g~-------~~~~l~ell~~aDvV~l~~Plt~~  243 (365)
T 4hy3_A          175 AGSEIGIVGFG---DLGKALRRVLSGFRARIRVFDPWLPRSMLE-ENGV-------EPASLEDVLTKSDFIFVVAAVTSE  243 (365)
T ss_dssp             SSSEEEEECCS---HHHHHHHHHHTTSCCEEEEECSSSCHHHHH-HTTC-------EECCHHHHHHSCSEEEECSCSSCC
T ss_pred             CCCEEEEecCC---cccHHHHHhhhhCCCEEEEECCCCCHHHHh-hcCe-------eeCCHHHHHhcCCEEEEcCcCCHH
Confidence            35689999965   99999999999999999982222 112111 1111       1224544  56666552       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                       -..++.+....+++|++++.++|
T Consensus       244 T~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          244 NKRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             ---CCCHHHHHTSCTTCEEEECSC
T ss_pred             HHhhcCHHHHhcCCCCcEEEECcC
Confidence             23577888999999999999998

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=85.97  E-value=1.1  Score=48.55  Aligned_cols=46  Identities=17%  Similarity=0.135  Sum_probs=36.8

Q ss_pred             HHHHHhcC---------cCCCcEEEEecccCchhhHHHHHHHHhc-cCcEEEe--cchhh
Q 006607          452 AAVVVNSL---------PKTTAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT--ICKDD  499 (639)
Q Consensus       452 aa~v~~~i---------~~~~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~~--~~~~~  499 (639)
                      .+-|.|||         .++.+.++|+|+++  -||+|+|+.|++ .|.+|.+  +++++
T Consensus        27 ~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~--GIG~AiA~~LA~g~GA~Vv~~~~~~~~   84 (405)
T 3zu3_A           27 EANVKKQIDYVTTEGPIANGPKRVLVIGAST--GYGLAARITAAFGCGADTLGVFFERPG   84 (405)
T ss_dssp             HHHHHHHHHHHHHHCCCTTCCSEEEEESCSS--HHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHhcCCcCCCCCEEEEeCcch--HHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence            44566666         34688899999997  999999999999 9999987  55443

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=85.92  E-value=1.7  Score=47.68  Aligned_cols=96  Identities=13%  Similarity=0.096  Sum_probs=57.7

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH--------HHHHhh--CCccc---ccceee-eccccc
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY--------EKLKLR--IPVEA---QHNLVL-STSYAA  523 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~--------~~l~~~--~~~~~---~~~l~~-~~~~~~  523 (639)
                      |..-++|.|+|+-   .+|+.+|..|++.|.+|++  +++++-        +++.++  +..+.   ....+. .+++++
T Consensus        51 ~~~i~kVaVIGaG---~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a  127 (460)
T 3k6j_A           51 AYDVNSVAIIGGG---TMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK  127 (460)
T ss_dssp             CCCCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG
T ss_pred             cccCCEEEEECCC---HHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH
Confidence            3455789999995   9999999999999999999  666632        222222  11110   111122 335766


Q ss_pred             -cceeEEE--EcCcCChh-----hh-hcCCCCceeecc-cccCCc
Q 006607          524 -HKTKIWL--VGDDLTGK-----EQ-ARAPKGTIFIPY-TQIPPR  558 (639)
Q Consensus       524 -~~~~vwi--vg~~~~~~-----~q-~~a~~G~~f~~~-~~~~~~  558 (639)
                       ++++++|  |-+.++-+     +. ..+++|++++.- |-+|+.
T Consensus       128 l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~  172 (460)
T 3k6j_A          128 LSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN  172 (460)
T ss_dssp             CTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH
T ss_pred             HccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH
Confidence             8888877  32222111     11 247899999764 335554

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=85.91  E-value=0.95  Score=47.96  Aligned_cols=83  Identities=10%  Similarity=0.076  Sum_probs=57.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg----  532 (639)
                      ..++|.++|. |  .||+++|+.|...|.+ |+.  ++.++.+.. .+.+...      ..++++  +.++++++-    
T Consensus       163 ~g~tvgIIG~-G--~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g~~~------~~~l~ell~~aDvV~l~~P~t  232 (364)
T 2j6i_A          163 EGKTIATIGA-G--RIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVGARR------VENIEELVAQADIVTVNAPLH  232 (364)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTTEEE------CSSHHHHHHTCSEEEECCCCS
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcCcEe------cCCHHHHHhcCCEEEECCCCC
Confidence            4568999997 5  9999999999999997 887  444333322 2222111      224443  566665521    


Q ss_pred             ----CcCChhhhhcCCCCceeecccc
Q 006607          533 ----DDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       533 ----~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                          ..++.+.+..+++|+++|.+++
T Consensus       233 ~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          233 AGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             hHHHHHhCHHHHhhCCCCCEEEECCC
Confidence                3566778889999999999999

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=85.85  E-value=0.73  Score=47.50  Aligned_cols=39  Identities=13%  Similarity=0.194  Sum_probs=31.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc-EEEe--c--chhhHHHHHh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI-KVAT--I--CKDDYEKLKL  505 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~--~~~~~~~l~~  505 (639)
                      +|+|+||||  -||+++++.|.++|. +|..  |  +.+.++++-+
T Consensus         2 ~VlVtGatG--~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~   45 (369)
T 3st7_A            2 NIVITGAKG--FVGKNLKADLTSTTDHHIFEVHRQTKEEELESALL   45 (369)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHH
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhc
Confidence            699999999  999999999999998 8887  4  4455555433

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=85.78  E-value=1.6  Score=45.37  Aligned_cols=84  Identities=15%  Similarity=0.213  Sum_probs=58.7

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA  522 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~  522 (639)
                      -|++.|++-+     +-.-++|+++|...  -||+-+|..|.++|-.|++  +..+.+++.               +   
T Consensus       161 cTp~gv~~lL~~~~i~l~Gk~vvViGRS~--iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~---------------~---  220 (303)
T 4b4u_A          161 ATPAGIMTILKENNIEIAGKHAVVVGRSA--ILGKPMAMMLLQANATVTICHSRTQNLPEL---------------V---  220 (303)
T ss_dssp             HHHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSSHHHH---------------H---
T ss_pred             ccHHHHHHHHHHHCCCCCCCEEEEEeccc--cccchHHHHHHhcCCEEEEecCCCCCHHHH---------------h---
Confidence            4666666554     33678999999997  9999999999999999999  212122111               1   


Q ss_pred             ccceeEEEEc----CcCChhhhhcCCCCceeecccccCCc
Q 006607          523 AHKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       523 ~~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                       ++++|+|+.    .-++++.   .++|+++||+. +.+.
T Consensus       221 -~~ADIvV~A~G~p~~i~~d~---vk~GavVIDVG-in~~  255 (303)
T 4b4u_A          221 -KQADIIVGAVGKAELIQKDW---IKQGAVVVDAG-FHPR  255 (303)
T ss_dssp             -HTCSEEEECSCSTTCBCGGG---SCTTCEEEECC-CBCC
T ss_pred             -hcCCeEEeccCCCCcccccc---ccCCCEEEEec-eecC
Confidence             356676632    2355554   49999999998 7665

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=85.72  E-value=0.99  Score=46.62  Aligned_cols=62  Identities=18%  Similarity=0.252  Sum_probs=43.2

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc----ccceeeeccccc-cceeEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA----QHNLVLSTSYAA-HKTKIWL  530 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~----~~~l~~~~~~~~-~~~~vwi  530 (639)
                      +|.++|+ |  .+|.++|..|++.|.  +|.+  +++++.+.++.++....    ... +..+++++ ++++++|
T Consensus         2 kI~VIGa-G--~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~-i~~~d~~~~~~aDvVi   72 (319)
T 1a5z_A            2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRAN-IYAGDYADLKGSDVVI   72 (319)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCE-EEECCGGGGTTCSEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcE-EEeCCHHHhCCCCEEE
Confidence            6899999 7  999999999999998  8988  78888887664432111    111 22234555 7787766

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=85.69  E-value=0.53  Score=52.14  Aligned_cols=43  Identities=21%  Similarity=0.167  Sum_probs=36.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP  508 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~  508 (639)
                      .+.|+++|| |  -+|+|+|..|++.|.+|.+  |+.++.++++++++
T Consensus       364 ~k~vlV~Ga-G--Gig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~  408 (523)
T 2o7s_A          364 SKTVVVIGA-G--GAGKALAYGAKEKGAKVVIANRTYERALELAEAIG  408 (523)
T ss_dssp             --CEEEECC-S--HHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT
T ss_pred             CCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC
Confidence            457999999 5  7999999999999999888  89999999988874

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=85.66  E-value=4.5  Score=42.13  Aligned_cols=156  Identities=13%  Similarity=0.192  Sum_probs=90.4

Q ss_pred             HHHcCCcEEEecccc------cc-------cccccCCceeeecCCC---------Cc-ceeeecCCh----------hHH
Q 006607          406 ADAKGVKVISLGLLN------QG-------EELNRNGEIYLERQPN---------KL-KIKVVDGSS----------LAA  452 (639)
Q Consensus       406 A~~~G~kv~~LG~ln------~~-------e~ln~~g~~~~~k~p~---------~L-~irvv~Gns----------lta  452 (639)
                      +.++|.+++.|+.=+      ++       .-|.+..-+.+.|+|.         .. +++|+.|-+          +=.
T Consensus        63 ~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl  142 (310)
T 3csu_A           63 MHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDL  142 (310)
T ss_dssp             HHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTTCSEEEEEESSTTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHhCCEEEEECCChhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHH
Confidence            467999999996433      33       3456667778888875         34 688887432          124


Q ss_pred             HHHHhcCcC-CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-c
Q 006607          453 AVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-H  524 (639)
Q Consensus       453 a~v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~  524 (639)
                      .++.+.... +..+|+.+|...-|-+++..+.+|++- |.+|.+-.++.|+   .+.+.+. +.+.. +.++ +.+ + +
T Consensus       143 ~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~  220 (310)
T 3csu_A          143 FTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLD-EKGIA-WSLHSSIEEVMA  220 (310)
T ss_dssp             HHHHHHHSCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHH-HTTCC-EEECSCGGGTTT
T ss_pred             HHHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HcCCe-EEEEcCHHHHhc
Confidence            455554432 456899999862128999999999999 9999994444331   1212111 22223 3344 565 4 8


Q ss_pred             ceeEEEEcCcCChh-----hhhcCCCCceeecccccCCc---CCCCCce-eecCC
Q 006607          525 KTKIWLVGDDLTGK-----EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  570 (639)
Q Consensus       525 ~~~vwivg~~~~~~-----~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~  570 (639)
                      +++|+..+-| ..|     |..+.     +-+| |++.+   ..++|+. .|.+|
T Consensus       221 ~aDvvyt~~~-q~er~~~~~~~~~-----~~~y-~v~~~ll~~a~~~ai~mH~lP  268 (310)
T 3csu_A          221 EVDILYMTRV-QKERLDPSEYANV-----KAQF-VLRASDLHNAKANMKVLHPLP  268 (310)
T ss_dssp             TCSEEEECC-----------------------C-CBCGGGGTTCCTTCEEECCSC
T ss_pred             CCCEEEECCc-cccccCHHHHHHH-----hhcc-CCCHHHHhhcCCCCEEECCCC
Confidence            8888887655 322     22111     2234 47777   3457875 66666

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=85.66  E-value=1.1  Score=46.16  Aligned_cols=63  Identities=14%  Similarity=0.191  Sum_probs=43.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhcc--CcEEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~--~~~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .+|.++|..|++.  |.+|.+  +++++.+.++.++...     ...+ +.. +++++ ++++++|+
T Consensus         2 kI~VIGa-G--~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~-i~~t~d~~~l~~aDvVii   75 (310)
T 1guz_A            2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTK-VTGSNDYADTANSDIVII   75 (310)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCE-EEEESCGGGGTTCSEEEE
T ss_pred             EEEEECC-C--HHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcE-EEECCCHHHHCCCCEEEE
Confidence            6899999 7  9999999999974  788988  7888888665432221     1112 233 35666 78877663

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=85.65  E-value=0.74  Score=47.63  Aligned_cols=28  Identities=18%  Similarity=0.226  Sum_probs=26.8

Q ss_pred             EEEEecccCchhhHHHHHHHHh-ccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLC-QMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~-~~~~~v~~  494 (639)
                      .|+|+|++|  -||+++|+.|. ++|.+|.+
T Consensus         4 ~vlVTGatG--~iG~~l~~~L~~~~g~~V~~   32 (397)
T 1gy8_A            4 RVLVCGGAG--YIGSHFVRALLRDTNHSVVI   32 (397)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHCCCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHhCCCEEEE
Confidence            699999999  99999999999 99999988

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=85.43  E-value=2  Score=47.08  Aligned_cols=128  Identities=15%  Similarity=0.148  Sum_probs=82.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC-Cc-ccc-----------cceeeecccc-c-c
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-PV-EAQ-----------HNLVLSTSYA-A-H  524 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~-~~-~~~-----------~~l~~~~~~~-~-~  524 (639)
                      |.-+|.++|+-   -+|.++|..|++.|.+|++  +++++.+++++.. +. +.+           .++...++++ + +
T Consensus         7 ~~~~I~VIG~G---~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~   83 (478)
T 2y0c_A            7 GSMNLTIIGSG---SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA   83 (478)
T ss_dssp             CCCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred             CCceEEEECcC---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence            56689999987   9999999999999999999  8999999998862 11 111           1222334565 3 6


Q ss_pred             ceeEEE--EcCcCC--------h-----hhh-hcCCCCceeecccccCCc----------C-C---C--CCceeecCCcc
Q 006607          525 KTKIWL--VGDDLT--------G-----KEQ-ARAPKGTIFIPYTQIPPR----------K-L---R--KDCFYHSTPAM  572 (639)
Q Consensus       525 ~~~vwi--vg~~~~--------~-----~~q-~~a~~G~~f~~~~~~~~~----------~-~---R--~dc~y~~~~a~  572 (639)
                      +++++|  |+...+        .     ++. ..+++|++++.-|-+||.          + +   +  .|+.+..+|..
T Consensus        84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~  163 (478)
T 2y0c_A           84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEF  163 (478)
T ss_dssp             HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred             cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhh
Confidence            676655  544221        1     111 246889999988878773          1 1   1  46677777776


Q ss_pred             ccCCCCccccccccccCcchhhhH
Q 006607          573 IIPPSLSNMHSCENWLGRRVMSAW  596 (639)
Q Consensus       573 ~~P~~~~~~~~~e~~~pr~~~~Ac  596 (639)
                      .-|+...    -++..|.+++.+|
T Consensus       164 ~~eG~~~----~~~~~p~~iviG~  183 (478)
T 2y0c_A          164 LKEGAAV----DDFTRPDRIVIGC  183 (478)
T ss_dssp             CCTTCHH----HHHHSCSCEEEEC
T ss_pred             hccccee----eccCCCCEEEEEE
Confidence            6666642    1233455555443

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=85.41  E-value=4.2  Score=42.32  Aligned_cols=159  Identities=18%  Similarity=0.186  Sum_probs=95.8

Q ss_pred             HHHcCCcEEEecc----ccccccc-------ccCCceeeecCCC---------CcceeeecCCh---h------HHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---L------AAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---l------taa~v~  456 (639)
                      +.++|.+++.|+.    ++++|.+       ....-+.+.|+|.         ..+++|+.|-+   |      =..++.
T Consensus        58 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~  137 (307)
T 3tpf_A           58 ITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVINALSELYHPTQVLGDLFTIK  137 (307)
T ss_dssp             HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHHSSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChHHHHHHHHhCCCCEEeCCCCCcCcHHHHHHHHHHH
Confidence            4579999999985    4455554       3344567778876         34578885543   1      145666


Q ss_pred             hcCcC-C-CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH-------HHHHhhCCcccccceeeec-ccc-c-c
Q 006607          457 NSLPK-T-TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY-------EKLKLRIPVEAQHNLVLST-SYA-A-H  524 (639)
Q Consensus       457 ~~i~~-~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~-------~~l~~~~~~~~~~~l~~~~-~~~-~-~  524 (639)
                      +.... + ..+|+++|..+  -+++..+.+|++-|.++.+-.++.|       +..+ +...+.+.. +.++ +.+ + +
T Consensus       138 e~~g~l~~gl~va~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~-~~a~~~g~~-~~~~~d~~eav~  213 (307)
T 3tpf_A          138 EWNKMQNGIAKVAFIGDSN--NMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAM-KQALISGAK-ISLGYDKFEALK  213 (307)
T ss_dssp             HTTCCGGGCCEEEEESCSS--HHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHH-HHHHHHTCE-EEEESCHHHHHT
T ss_pred             HHhCCCCCCCEEEEEcCCC--ccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHH-HHHHHcCCe-EEEEcCHHHHhc
Confidence            65542 4 56899999964  8999999999999999998333332       1122 111122223 3344 565 4 8


Q ss_pred             ceeEEEEcCcCChh---hhhcCCCCceeecccccCCc---CCCCCce-eecCCc
Q 006607          525 KTKIWLVGDDLTGK---EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       525 ~~~vwivg~~~~~~---~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +++|+..+-|.+-.   |+.+  .-..|-|| |+.++   ..++|+. .|.+|+
T Consensus       214 ~aDvvyt~~w~smg~e~~~~~--~~~~~~~y-~v~~e~l~~a~~~ai~mH~lPa  264 (307)
T 3tpf_A          214 DKDVVITDTWVSMGEENEKER--KIKEFEGF-MIDEKAMSVANKDAILLHCLPA  264 (307)
T ss_dssp             TCSEEEECCSSCTTGGGGHHH--HHHHTGGG-CBCHHHHHHSCTTCEEEECSCC
T ss_pred             CCCEEEecCcccCCchhhHHH--HHHHhccc-ccCHHHHHhcCCCcEEECCCCC
Confidence            88888876664321   1110  01123445 37777   4567765 677775

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=85.35  E-value=0.63  Score=46.69  Aligned_cols=30  Identities=13%  Similarity=0.306  Sum_probs=27.5

Q ss_pred             CcEEEEecc----------------cCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Ga----------------tg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|+                +|  ++|+|+|++|+++|.+|++
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG--~mG~aiA~~~~~~Ga~V~l   48 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTG--HLGKIITETLLSAGYEVCL   48 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCC--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            357899988                78  9999999999999999999

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=85.34  E-value=0.34  Score=48.58  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=25.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.|+|+|++|  -||+++|+.|.++|..|.+
T Consensus         2 ~~vlVTGatG--~iG~~l~~~L~~~g~~v~~   30 (313)
T 3ehe_A            2 SLIVVTGGAG--FIGSHVVDKLSESNEIVVI   30 (313)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEECCCc--hHHHHHHHHHHhCCCEEEE
Confidence            3699999999  9999999999999966666

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=85.33  E-value=0.75  Score=51.89  Aligned_cols=37  Identities=22%  Similarity=0.229  Sum_probs=31.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~  501 (639)
                      .+.|+|+||||  -||+++|+.|.++ |.+|..  |+.++.+
T Consensus       315 ~~~VLVTGatG--~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~  354 (660)
T 1z7e_A          315 RTRVLILGVNG--FIGNHLTERLLREDHYEVYGLDIGSDAIS  354 (660)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHSSSEEEEEEESCCTTTG
T ss_pred             CceEEEEcCCc--HHHHHHHHHHHhcCCCEEEEEEcCchhhh
Confidence            45799999999  9999999999987 888887  6665543

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=85.31  E-value=1.7  Score=44.68  Aligned_cols=42  Identities=14%  Similarity=0.134  Sum_probs=36.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~  506 (639)
                      ...+|.++|+-   .+|.++|..|++.|.+|++ +++++++.++++
T Consensus        18 ~~~kI~IiGaG---a~G~~~a~~L~~~G~~V~l~~~~~~~~~i~~~   60 (318)
T 3hwr_A           18 QGMKVAIMGAG---AVGCYYGGMLARAGHEVILIARPQHVQAIEAT   60 (318)
T ss_dssp             --CEEEEESCS---HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred             cCCcEEEECcC---HHHHHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence            45689999996   9999999999999999998 888899999875

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=85.31  E-value=0.62  Score=45.13  Aligned_cols=82  Identities=16%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcCcCCh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGDDLTG  537 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~~~~~  537 (639)
                      ...+|.++| +|  .+|+++|+.|.+.|.+|.+  |++++.++++++   +     +..+++++  ++++++|+--.-+.
T Consensus        27 ~~~~I~iiG-~G--~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~---g-----~~~~~~~~~~~~~DvVi~av~~~~   95 (215)
T 2vns_A           27 EAPKVGILG-SG--DFARSLATRLVGSGFKVVVGSRNPKRTARLFPS---A-----AQVTFQEEAVSSPEVIFVAVFREH   95 (215)
T ss_dssp             --CCEEEEC-CS--HHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT---T-----SEEEEHHHHTTSCSEEEECSCGGG
T ss_pred             CCCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc---C-----CceecHHHHHhCCCEEEECCChHH
Confidence            345799999 67  9999999999999999988  888888877553   1     11224432  56777663111000


Q ss_pred             -hh---hhcCCCCceeecccc
Q 006607          538 -KE---QARAPKGTIFIPYTQ  554 (639)
Q Consensus       538 -~~---q~~a~~G~~f~~~~~  554 (639)
                       ++   .....+|+++++.+.
T Consensus        96 ~~~v~~l~~~~~~~~vv~~s~  116 (215)
T 2vns_A           96 YSSLCSLSDQLAGKILVDVSN  116 (215)
T ss_dssp             SGGGGGGHHHHTTCEEEECCC
T ss_pred             HHHHHHHHHhcCCCEEEEeCC
Confidence             00   111226777777774

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=85.17  E-value=0.88  Score=47.28  Aligned_cols=83  Identities=8%  Similarity=0.098  Sum_probs=55.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c-chhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC---
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD---  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~-~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~---  533 (639)
                      ..++|.++|. |  .||+++|+.|...|.+|..  + +.++ +.. .+.+...      ..++++  +.++++++--   
T Consensus       145 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~g~~~------~~~l~ell~~aDvVil~~p~~  213 (320)
T 1gdh_A          145 DNKTLGIYGF-G--SIGQALAKRAQGFDMDIDYFDTHRASS-SDE-ASYQATF------HDSLDSLLSVSQFFSLNAPST  213 (320)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHHHTTTCEEEEECSSCCCH-HHH-HHHTCEE------CSSHHHHHHHCSEEEECCCCC
T ss_pred             CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCcCh-hhh-hhcCcEE------cCCHHHHHhhCCEEEEeccCc
Confidence            3567999997 4  9999999999999999988  5 4444 222 1111111      224443  5667766332   


Q ss_pred             -----cCChhhhhcCCCCceeeccccc
Q 006607          534 -----DLTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       534 -----~~~~~~q~~a~~G~~f~~~~~~  555 (639)
                           .++.+....+++|++++++++-
T Consensus       214 ~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          214 PETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence                 3445667789999999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=85.16  E-value=1.5  Score=45.57  Aligned_cols=42  Identities=17%  Similarity=0.157  Sum_probs=36.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+++|++|  -||.++++.+...|.+|..  +++++.+.+++
T Consensus       170 ~g~~vlV~Gasg--giG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  213 (351)
T 1yb5_A          170 AGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ  213 (351)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             CcCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence            456899999998  9999999999999999887  78888886643

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=85.14  E-value=1.4  Score=43.34  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=34.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~  507 (639)
                      +|.++|+ |  .+|+++|..|.+.| .+|.+  |++++.++++++.
T Consensus         2 ~i~iiG~-G--~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~   44 (263)
T 1yqg_A            2 NVYFLGG-G--NMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (263)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEECc-h--HHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhc
Confidence            5889996 6  99999999999999 89888  8889999888763

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=85.12  E-value=0.91  Score=49.17  Aligned_cols=32  Identities=13%  Similarity=0.155  Sum_probs=28.7

Q ss_pred             CCCcEEEEecccCchhhHHH--HHHHHhccCcEEEe
Q 006607          461 KTTAHVLLRGTVTANKVANA--VASSLCQMGIKVAT  494 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~a--va~~L~~~~~~v~~  494 (639)
                      ++.+.|+++|+++  -||+|  +|+.|+++|.+|.+
T Consensus        58 ~~gK~aLVTGass--GIG~A~aia~ala~~Ga~Vi~   91 (418)
T 4eue_A           58 RGPKKVLIVGASS--GFGLATRISVAFGGPEAHTIG   91 (418)
T ss_dssp             CCCSEEEEESCSS--HHHHHHHHHHHHSSSCCEEEE
T ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHHHhCCCEEEE
Confidence            4677899999997  99999  99999999999977

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=85.10  E-value=0.6  Score=57.95  Aligned_cols=43  Identities=23%  Similarity=0.221  Sum_probs=35.5

Q ss_pred             CcEEEEecccCchh-hHHHHHHHHhccCcEEEe---cchhhHHHHHhhC
Q 006607          463 TAHVLLRGTVTANK-VANAVASSLCQMGIKVAT---ICKDDYEKLKLRI  507 (639)
Q Consensus       463 ~~~V~~~Gatg~~k-ig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~  507 (639)
                      .+.|+|+|++|  - ||+++|+.|+++|.+|.+   |+.++.+++.+++
T Consensus       476 GKvALVTGASg--GGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL  522 (1688)
T 2pff_A          476 DKYVLITGAGK--GSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSI  522 (1688)
T ss_dssp             SCCEEECSCSS--SSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHT
T ss_pred             CCEEEEECCCh--HHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHH
Confidence            46799999997  6 999999999999999988   5666666665555

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=85.08  E-value=0.83  Score=47.77  Aligned_cols=84  Identities=13%  Similarity=0.058  Sum_probs=56.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|- |  .||+++|+.|...|.+|+.  ++.++-+..++. +.       ...++++  +.++++++      
T Consensus       144 ~g~tvGIIG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~-g~-------~~~~l~ell~~aDvV~l~~P~t~  212 (330)
T 4e5n_A          144 DNATVGFLGM-G--AIGLAMADRLQGWGATLQYHEAKALDTQTEQRL-GL-------RQVACSELFASSDFILLALPLNA  212 (330)
T ss_dssp             TTCEEEEECC-S--HHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHH-TE-------EECCHHHHHHHCSEEEECCCCST
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhc-Cc-------eeCCHHHHHhhCCEEEEcCCCCH
Confidence            3568999996 4  9999999999999999988  443222222111 11       1224443  55666552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccccC
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                        -..++.+....+++|++++.+++-+
T Consensus       213 ~t~~li~~~~l~~mk~gailIN~arg~  239 (330)
T 4e5n_A          213 DTLHLVNAELLALVRPGALLVNPCRGS  239 (330)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence              2356678888999999999999833

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=85.06  E-value=1.3  Score=45.74  Aligned_cols=83  Identities=12%  Similarity=0.111  Sum_probs=56.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc-----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  532 (639)
                      ..++|.++|. |  .||+++|+.|...|.+|..  ++.++-+ . .+.+..       ..++++  +.++++++-     
T Consensus       141 ~g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-~~~g~~-------~~~l~ell~~aDvVvl~~P~~~  208 (313)
T 2ekl_A          141 AGKTIGIVGF-G--RIGTKVGIIANAMGMKVLAYDILDIREK-A-EKINAK-------AVSLEELLKNSDVISLHVTVSK  208 (313)
T ss_dssp             TTCEEEEESC-S--HHHHHHHHHHHHTTCEEEEECSSCCHHH-H-HHTTCE-------ECCHHHHHHHCSEEEECCCCCT
T ss_pred             CCCEEEEEee-C--HHHHHHHHHHHHCCCEEEEECCCcchhH-H-HhcCce-------ecCHHHHHhhCCEEEEeccCCh
Confidence            3568999996 5  9999999999999999998  5444421 1 222211       123443  566665522     


Q ss_pred             ---CcCChhhhhcCCCCceeecccccC
Q 006607          533 ---DDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       533 ---~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                         ..++++....+++|++++++++-+
T Consensus       209 ~t~~li~~~~l~~mk~ga~lIn~arg~  235 (313)
T 2ekl_A          209 DAKPIIDYPQFELMKDNVIIVNTSRAV  235 (313)
T ss_dssp             TSCCSBCHHHHHHSCTTEEEEESSCGG
T ss_pred             HHHHhhCHHHHhcCCCCCEEEECCCCc
Confidence               234466778899999999999843

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=85.05  E-value=0.88  Score=49.50  Aligned_cols=43  Identities=12%  Similarity=0.285  Sum_probs=33.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc--hhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~--~~~~~~l~~~  506 (639)
                      ..+.++++|++|  -||+++|++|+++|.+|.+  |+  .++++++.++
T Consensus       212 ~gk~~LVTGgsg--GIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~  258 (454)
T 3u0b_A          212 DGKVAVVTGAAR--GIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK  258 (454)
T ss_dssp             TTCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred             CCCEEEEeCCch--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH
Confidence            457899999998  9999999999999999998  43  3344444444

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=84.97  E-value=4.1  Score=42.78  Aligned_cols=163  Identities=18%  Similarity=0.239  Sum_probs=96.3

Q ss_pred             HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.    ++++|.       |....-+.+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        80 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  159 (325)
T 1vlv_A           80 FAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIE  159 (325)
T ss_dssp             HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence            4579999999975    334444       34556677888876         24577777654         1134455


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHH---hhCCcccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLK---LRIPVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~---~~~~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +.... +..+|+.+|.. .|-+++..+.+|++-|.+|.+-.++.|+   .+.   ++...+.+.. +.++ +.+ + +++
T Consensus       160 e~~g~l~gl~va~vGD~-~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~-v~~~~d~~eav~~a  237 (325)
T 1vlv_A          160 ENFGRLKGVKVVFMGDT-RNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGS-VSFTSNLEEALAGA  237 (325)
T ss_dssp             HHHSCSTTCEEEEESCT-TSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCE-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCC-CcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEcCHHHHHccC
Confidence            54332 35689999996 2489999999999999999994444331   121   1111222223 3334 465 4 889


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCCc---CC-CCCce-eecCCc
Q 006607          527 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KL-RKDCF-YHSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~-R~dc~-y~~~~a  571 (639)
                      +|+..+-|.+..++...+.- -.|-+| |++++   .. ++|+. .|.+|+
T Consensus       238 Dvvyt~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~k~dai~mH~LP~  287 (325)
T 1vlv_A          238 DVVYTDVWASMGEEDKEKERMALLKPY-QVNERVMEMTGKSETIFMHCLPA  287 (325)
T ss_dssp             SEEEECCCC----------CHHHHGGG-CBCHHHHHTTCCTTCEEEECSCC
T ss_pred             CEEEeccccccccccchHhHHHHHhhc-CCCHHHHHhccCCCeEEECCCCC
Confidence            99888777654433211211 223445 38777   55 77875 788886

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=84.94  E-value=1.1  Score=48.17  Aligned_cols=84  Identities=7%  Similarity=0.012  Sum_probs=56.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc-----
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG-----  532 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg-----  532 (639)
                      ..++|-++|.-   .||+++|+.|...|.+|..  ++.++.+.. .+.+...      ..++++  +.++++++-     
T Consensus       190 ~gktvGIIGlG---~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~-~~~G~~~------~~~l~ell~~aDvV~l~~Plt~  259 (393)
T 2nac_A          190 EAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTW------HATREDMYPVCDVVTLNCPLHP  259 (393)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEE------CSSHHHHGGGCSEEEECSCCCT
T ss_pred             CCCEEEEEeEC---HHHHHHHHHHHhCCCEEEEEcCCccchhhH-hhcCcee------cCCHHHHHhcCCEEEEecCCch
Confidence            45689999976   9999999999999999988  443332222 1111111      123443  566676532     


Q ss_pred             ---CcCChhhhhcCCCCceeeccccc
Q 006607          533 ---DDLTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       533 ---~~~~~~~q~~a~~G~~f~~~~~~  555 (639)
                         ..++.+.+..+++|+++|.+++-
T Consensus       260 ~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          260 ETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhhHHHHhhCCCCCEEEECCCc
Confidence               33556777899999999999993

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=84.88  E-value=0.97  Score=47.12  Aligned_cols=54  Identities=13%  Similarity=0.047  Sum_probs=41.3

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       450 ltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +||+-.+...  .+..+.|+++||+|  -||.++++.+...|.+|..  +++++++.+++
T Consensus       149 ~ta~~al~~~~~~~~g~~VlV~Ga~G--~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          149 TTAYISLKELGGLSEGKKVLVTAAAG--GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             HHHHHHHHHHTCCCTTCEEEETTTTB--TTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            4454444322  23456899999998  9999999999989999887  78888888765

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=84.88  E-value=0.64  Score=46.39  Aligned_cols=30  Identities=17%  Similarity=0.293  Sum_probs=27.4

Q ss_pred             CcEEEEecc----------------cCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Ga----------------tg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+.|+++|+                +|  ++|+|+|++|+++|.+|++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg--~iG~aiA~~~~~~Ga~V~l   53 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSG--KMGFAIAAAAARRGANVTL   53 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCCCcccCceeeccCCCcc--HHHHHHHHHHHHCCCEEEE
Confidence            467999998                57  9999999999999999998

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=84.83  E-value=0.52  Score=48.23  Aligned_cols=29  Identities=10%  Similarity=0.295  Sum_probs=26.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~  494 (639)
                      +.|+|+||+|  -||+++|+.|.++| .+|..
T Consensus        47 ~~vlVtGatG--~iG~~l~~~L~~~g~~~V~~   76 (357)
T 2x6t_A           47 RMIIVTGGAG--FIGSNIVKALNDKGITDILV   76 (357)
T ss_dssp             -CEEEETTTS--HHHHHHHHHHHHTTCCCEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCcEEEE
Confidence            5799999999  99999999999999 78877

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=84.69  E-value=0.97  Score=46.65  Aligned_cols=78  Identities=13%  Similarity=0.162  Sum_probs=54.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG------  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg------  532 (639)
                      .++|.++|. |  .||+++|+.|...|.+|..  |+.+  +    +   +.    ....++++  +.++++++-      
T Consensus       124 g~~vgIIG~-G--~IG~~~A~~l~~~G~~V~~~dr~~~--~----~---~~----~~~~~l~ell~~aDvV~l~~P~~~~  187 (303)
T 1qp8_A          124 GEKVAVLGL-G--EIGTRVGKILAALGAQVRGFSRTPK--E----G---PW----RFTNSLEEALREARAAVCALPLNKH  187 (303)
T ss_dssp             TCEEEEESC-S--THHHHHHHHHHHTTCEEEEECSSCC--C----S---SS----CCBSCSHHHHTTCSEEEECCCCSTT
T ss_pred             CCEEEEEcc-C--HHHHHHHHHHHHCCCEEEEECCCcc--c----c---Cc----ccCCCHHHHHhhCCEEEEeCcCchH
Confidence            457999996 4  9999999999999999988  3332  1    1   11    11234544  667776632      


Q ss_pred             --CcCChhhhhcCCCCceeecccccC
Q 006607          533 --DDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       533 --~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                        ..++++....+++|++++++++-+
T Consensus       188 t~~~i~~~~l~~mk~gailin~srg~  213 (303)
T 1qp8_A          188 TRGLVKYQHLALMAEDAVFVNVGRAE  213 (303)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCGG
T ss_pred             HHHHhCHHHHhhCCCCCEEEECCCCc
Confidence              245567888999999999999843

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=84.53  E-value=0.86  Score=49.96  Aligned_cols=41  Identities=27%  Similarity=0.259  Sum_probs=35.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~  506 (639)
                      .++|+++|| |  .+|+++|..|++. |.+|++  |+.++.++++++
T Consensus        23 ~k~VlIiGA-G--giG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~   66 (467)
T 2axq_A           23 GKNVLLLGS-G--FVAQPVIDTLAANDDINVTVACRTLANAQALAKP   66 (467)
T ss_dssp             CEEEEEECC-S--TTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG
T ss_pred             CCEEEEECC-h--HHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh
Confidence            457999998 8  9999999999987 788888  888999888765

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=84.50  E-value=2.8  Score=43.75  Aligned_cols=162  Identities=20%  Similarity=0.252  Sum_probs=98.4

Q ss_pred             HHHcCCcEEEecc----cccccc-------cccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGL----LNQGEE-------LNRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~----ln~~e~-------ln~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.    +.++|.       |.+..-..+.|+|+         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (315)
T 1pvv_A           68 MAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIW  147 (315)
T ss_dssp             HHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            4579999999974    334444       34556678888886         34577776543         1134455


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HH---HhhCCcccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KL---KLRIPVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l---~~~~~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +.... +..+|..+|..+  -+++..+.+|++-|.+|.+-.++.|+   .+   .++...+.+.. +.++ +.+ + +++
T Consensus       148 e~~g~l~gl~va~vGD~~--rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~-~~~~~d~~eav~~a  224 (315)
T 1pvv_A          148 EKKGTIKGVKVVYVGDGN--NVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGS-FELLHDPVKAVKDA  224 (315)
T ss_dssp             HHHSCCTTCEEEEESCCC--HHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCE-EEEESCHHHHTTTC
T ss_pred             HHhCCcCCcEEEEECCCc--chHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEeCHHHHhCCC
Confidence            54332 456899999975  99999999999999999993333321   11   11111222223 3334 465 4 888


Q ss_pred             eEEEEcCcCChhhhhcCCCC-ceeecccccCCc---CCCCCce-eecCCc
Q 006607          527 KIWLVGDDLTGKEQARAPKG-TIFIPYTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~~q~~a~~G-~~f~~~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +|+..+-|.+..++...+.- -.|-+| |++++   ..++|+. .|.+|+
T Consensus       225 Dvvy~~~w~smg~~~~~~~~~~~~~~y-~v~~ell~~a~~~ai~mH~lP~  273 (315)
T 1pvv_A          225 DVIYTDVWASMGQEAEAEERRKIFRPF-QVNKDLVKHAKPDYMFMHCLPA  273 (315)
T ss_dssp             SEEEECCCCCSSTTSSSSHHHHHHGGG-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEcceeccCcccchHHHHHHHHhc-CCCHHHHhhcCCCcEEECCCCC
Confidence            99888777654432111110 123344 37777   5568875 788886

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=84.50  E-value=1.6  Score=44.90  Aligned_cols=38  Identities=11%  Similarity=0.019  Sum_probs=32.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+|+++|. |  ++|+.+|+.|.++|. |++  +++++.+ +++
T Consensus       115 ~~~viI~G~-G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~  154 (336)
T 1lnq_A          115 SRHVVICGW-S--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR  154 (336)
T ss_dssp             -CEEEEESC-C--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH
T ss_pred             cCCEEEECC-c--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh
Confidence            457999997 5  999999999999999 887  8888888 765

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=84.49  E-value=0.99  Score=46.87  Aligned_cols=65  Identities=18%  Similarity=0.251  Sum_probs=43.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc--ccceeeec--cccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA--QHNLVLST--SYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~--~~~l~~~~--~~~~-~~~~vwiv  531 (639)
                      ..+|.++|| |  .||.+++..|+..+.  .+.+  .++++.+....++....  ..+ +.++  .+++ ++++++|+
T Consensus         5 ~~KI~IiGa-G--~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~-~~v~~~~~~a~~~aDvVii   78 (318)
T 1ez4_A            5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAP-KKIYSGEYSDCKDADLVVI   78 (318)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCC-CEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCC-eEEEECCHHHhCCCCEEEE
Confidence            358999999 8  999999999997775  6766  77777775444433221  111 1222  3556 88888775

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=84.48  E-value=1  Score=49.27  Aligned_cols=87  Identities=17%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--c---ceeEEEEcCc--
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--H---KTKIWLVGDD--  534 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~vwivg~~--  534 (639)
                      .+|.++|+-   .+|+++|+.|++.|.+|.+  |++++.++++++.+.   ..+...+++++  +   +++++|+--.  
T Consensus         6 ~~IgvIG~G---~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~---~gi~~~~s~~e~v~~l~~aDvVilavp~~   79 (474)
T 2iz1_A            6 ANFGVVGMA---VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQD---KNLVFTKTLEEFVGSLEKPRRIMLMVQAG   79 (474)
T ss_dssp             BSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTT---SCEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred             CcEEEEeeH---HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcC---CCeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence            569999974   9999999999999999988  888999999877531   12222334543  3   3777663111  


Q ss_pred             --CCh--hhh-hcCCCCceeecccccC
Q 006607          535 --LTG--KEQ-ARAPKGTIFIPYTQIP  556 (639)
Q Consensus       535 --~~~--~~q-~~a~~G~~f~~~~~~~  556 (639)
                        ++.  ++. ..+++|+++++.+...
T Consensus        80 ~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           80 AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence              111  111 2467899999988644

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=84.48  E-value=0.96  Score=48.34  Aligned_cols=43  Identities=19%  Similarity=0.190  Sum_probs=36.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC---cEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~---~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ++|+++|| |  .||+++|+.|++.|   .+|.+  |+.++.+++.++++.
T Consensus         2 ~kVlIiGa-G--giG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~   49 (405)
T 4ina_A            2 AKVLQIGA-G--GVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA   49 (405)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh
Confidence            47899999 8  89999999999887   37877  999999999887643

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=84.44  E-value=1.7  Score=45.34  Aligned_cols=46  Identities=17%  Similarity=0.203  Sum_probs=35.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCc
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPV  509 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~  509 (639)
                      +..+.|++.||+|  -||.++++.+...|.+|.. .++++.+.++ +++.
T Consensus       182 ~~g~~VlV~Ga~G--~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~-~lGa  228 (375)
T 2vn8_A          182 CTGKRVLILGASG--GVGTFAIQVMKAWDAHVTAVCSQDASELVR-KLGA  228 (375)
T ss_dssp             CTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTC
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHhCCCEEEEEeChHHHHHHH-HcCC
Confidence            3456899999998  9999999998889999877 5566777663 4443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=84.43  E-value=0.7  Score=46.20  Aligned_cols=28  Identities=25%  Similarity=0.423  Sum_probs=26.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+|+|++|  -||+++|+.|.++|.+|..
T Consensus         2 ~vlVTGatG--~iG~~l~~~L~~~G~~V~~   29 (311)
T 2p5y_A            2 RVLVTGGAG--FIGSHIVEDLLARGLEVAV   29 (311)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             EEEEEeCCc--HHHHHHHHHHHHCCCEEEE
Confidence            589999999  9999999999999999987

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=84.43  E-value=0.66  Score=45.17  Aligned_cols=30  Identities=27%  Similarity=0.275  Sum_probs=27.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc-cCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQ-MGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~-~~~~v~~  494 (639)
                      .+.|+++|++|  -||+++|+.|++ .|.+|.+
T Consensus         4 ~k~vlITGas~--gIG~~~a~~l~~~~g~~v~~   34 (244)
T 4e4y_A            4 MANYLVTGGSK--GIGKAVVELLLQNKNHTVIN   34 (244)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTSTTEEEEE
T ss_pred             CCeEEEeCCCC--hHHHHHHHHHHhcCCcEEEE
Confidence            35799999998  999999999998 8999888

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=84.42  E-value=1.2  Score=56.44  Aligned_cols=44  Identities=18%  Similarity=0.161  Sum_probs=35.2

Q ss_pred             CCCcEEEEecccCchh-hHHHHHHHHhccCcEEEe---cchhhHHHHHhh
Q 006607          461 KTTAHVLLRGTVTANK-VANAVASSLCQMGIKVAT---ICKDDYEKLKLR  506 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~k-ig~ava~~L~~~~~~v~~---~~~~~~~~l~~~  506 (639)
                      -..+.|+|+|++|  - ||+++|+.|+++|.+|.+   |+.++.++..++
T Consensus       650 L~gKvaLVTGASg--GgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~e  697 (1878)
T 2uv9_A          650 FQGKHALMTGAGA--GSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQG  697 (1878)
T ss_dssp             CTTCEEEEESCCT--TSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH
T ss_pred             CCCCEEEEECCCC--cHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHH
Confidence            3457899999997  6 999999999999999988   556666554443

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=84.39  E-value=0.67  Score=46.54  Aligned_cols=79  Identities=9%  Similarity=0.041  Sum_probs=46.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEE-e--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--cCcCCh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVA-T--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--GDDLTG  537 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~-~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--g~~~~~  537 (639)
                      +|.++|+ |  .+|+++|+.|.+. .+|. +  |++++.++++++.+. .      .+++++  ++++++|+  -+..-.
T Consensus         4 ~I~iIG~-G--~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~------~~~~~~~~~~~DvVilav~~~~~~   72 (276)
T 2i76_A            4 VLNFVGT-G--TLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-K------AATLEKHPELNGVVFVIVPDRYIK   72 (276)
T ss_dssp             CCEEESC-C--HHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-C------CCSSCCCCC---CEEECSCTTTHH
T ss_pred             eEEEEeC-C--HHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-c------cCCHHHHHhcCCEEEEeCChHHHH
Confidence            5789996 6  9999999999987 7873 5  888899988776543 1      234443  56666552  121111


Q ss_pred             hhhhcC-CCCceeecccc
Q 006607          538 KEQARA-PKGTIFIPYTQ  554 (639)
Q Consensus       538 ~~q~~a-~~G~~f~~~~~  554 (639)
                      +-...+ ++|+++++.+-
T Consensus        73 ~v~~~l~~~~~ivi~~s~   90 (276)
T 2i76_A           73 TVANHLNLGDAVLVHCSG   90 (276)
T ss_dssp             HHHTTTCCSSCCEEECCS
T ss_pred             HHHHHhccCCCEEEECCC
Confidence            111111 67888888874

>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A

Probab=84.35  E-value=1.5  Score=45.89  Aligned_cols=162  Identities=17%  Similarity=0.194  Sum_probs=97.8

Q ss_pred             HHHcCCcEEEeccc----cccccc-------ccCCceeeecCCC---------CcceeeecCCh---------hHHHHHH
Q 006607          406 ADAKGVKVISLGLL----NQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSS---------LAAAVVV  456 (639)
Q Consensus       406 A~~~G~kv~~LG~l----n~~e~l-------n~~g~~~~~k~p~---------~L~irvv~Gns---------ltaa~v~  456 (639)
                      +.++|.+++.|+.=    +++|.+       ....-+.+.|+|.         ..+++|+.|-+         +=..++.
T Consensus        68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~  147 (321)
T 1oth_A           68 FALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQ  147 (321)
T ss_dssp             HHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred             HHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence            45799999999753    344443       4445667888876         35688887764         1134555


Q ss_pred             hcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhH------HHHHhhCCcccccceeeec-ccc-c-cce
Q 006607          457 NSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY------EKLKLRIPVEAQHNLVLST-SYA-A-HKT  526 (639)
Q Consensus       457 ~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~------~~l~~~~~~~~~~~l~~~~-~~~-~-~~~  526 (639)
                      +.... +..+|+.+|..+  -+++..+.+|++-|.+|.+-.++.|      .+..++...+.+.. +.++ +.+ + +++
T Consensus       148 e~~g~l~gl~va~vGD~~--~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~-~~~~~d~~eav~~a  224 (321)
T 1oth_A          148 EHYSSLKGLTLSWIGDGN--NILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTK-LLLTNDPLEAAHGG  224 (321)
T ss_dssp             HHHSCCTTCEEEEESCSS--HHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCC-EEEESCHHHHHTTC
T ss_pred             HHhCCcCCcEEEEECCch--hhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCe-EEEEECHHHHhccC
Confidence            55432 456899999974  7999999999999999999333322      22212212222223 3334 465 4 888


Q ss_pred             eEEEEcCcCChh-hhhcCCCCceeecccccCCc---CCCCCce-eecCCc
Q 006607          527 KIWLVGDDLTGK-EQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTPA  571 (639)
Q Consensus       527 ~vwivg~~~~~~-~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~a  571 (639)
                      +|+..+-|++-+ |.++.++=..|-+| |++.+   ..++|+. .|.+|+
T Consensus       225 Dvvy~d~w~s~g~e~~~~~~~~~~~~y-~v~~~~l~~a~~dai~mH~lP~  273 (321)
T 1oth_A          225 NVLITDTWISMGREEEKKKRLQAFQGY-QVTMKTAKVAASDWTFLHCLPR  273 (321)
T ss_dssp             SEEEECCSSCTTCGGGHHHHHHHTTTC-CBCHHHHHTSCTTCEEEECSCC
T ss_pred             CEEEEeccccccchhhhHHHHHhccCc-eECHHHHhhcCCCCEEECCCCC
Confidence            998887777621 11111110113334 47777   5568886 788886

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=84.35  E-value=1.3  Score=45.52  Aligned_cols=64  Identities=16%  Similarity=0.179  Sum_probs=44.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc-----cccceeee-ccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLS-TSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~-~~~~~-~~~~vwiv  531 (639)
                      .+|.++|| |  .+|+.+|..|++.|. +|.+  +++++.+....++...     .... +.. +++++ ++++++|.
T Consensus         3 ~kI~VIGa-G--~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~-i~~t~d~~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVR-VTGTNNYADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCC-EEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeE-EEECCCHHHHCCCCEEEE
Confidence            47999999 8  999999999998886 8777  6777776544443321     1112 223 45766 88888663

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=84.29  E-value=1.5  Score=45.16  Aligned_cols=42  Identities=14%  Similarity=0.167  Sum_probs=36.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~  505 (639)
                      ..+.|+++|+.|  -||.++++.+.+. |.+|..  +++++.+.+++
T Consensus       170 ~g~~vlV~Gagg--~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~  214 (347)
T 1jvb_A          170 PTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR  214 (347)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEECCCc--cHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence            456899999986  9999999999988 999887  78888887754

>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1

Probab=84.27  E-value=10  Score=39.45  Aligned_cols=157  Identities=16%  Similarity=0.258  Sum_probs=96.0

Q ss_pred             HHHcCCcEEEeccc-----cccc-------ccccCCceeeecCCC---------CcceeeecCCh----------hHHHH
Q 006607          406 ADAKGVKVISLGLL-----NQGE-------ELNRNGEIYLERQPN---------KLKIKVVDGSS----------LAAAV  454 (639)
Q Consensus       406 A~~~G~kv~~LG~l-----n~~e-------~ln~~g~~~~~k~p~---------~L~irvv~Gns----------ltaa~  454 (639)
                      +.++|.+++.|+.=     .++|       -|.+..-+.+.|+|+         ..+++|+.|-+          +=..+
T Consensus        66 ~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~T  145 (308)
T 1ml4_A           66 MHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYT  145 (308)
T ss_dssp             HHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHH
T ss_pred             HHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHH
Confidence            45789999999643     3344       346667778888876         35688887432          22456


Q ss_pred             HHhcCcC-CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHH---HHHhhCCcccccceeeec-ccc-c-ccee
Q 006607          455 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYE---KLKLRIPVEAQHNLVLST-SYA-A-HKTK  527 (639)
Q Consensus       455 v~~~i~~-~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~---~l~~~~~~~~~~~l~~~~-~~~-~-~~~~  527 (639)
                      +.+.... +..+|+.+|...-|-+++..+.+|++-|.+|.+-.++.|+   .+.+.+. +.+.. +.++ +.+ + ++++
T Consensus       146 i~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~-~~g~~-~~~~~d~~eav~~aD  223 (308)
T 1ml4_A          146 IKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELR-EKGMK-VVETTTLEDVIGKLD  223 (308)
T ss_dssp             HHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHH-HTTCC-EEEESCTHHHHTTCS
T ss_pred             HHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHH-HcCCe-EEEEcCHHHHhcCCC
Confidence            6665533 4568999998621279999999999999999994444332   1222211 22223 3343 565 4 8888


Q ss_pred             EEEEcCcCCh-----hhhhcCCCCceeecccccCCc---CCCCCce-eecCC
Q 006607          528 IWLVGDDLTG-----KEQARAPKGTIFIPYTQIPPR---KLRKDCF-YHSTP  570 (639)
Q Consensus       528 vwivg~~~~~-----~~q~~a~~G~~f~~~~~~~~~---~~R~dc~-y~~~~  570 (639)
                      |+..+-|-++     +|..+...+     | |++++   ..++|+. .|.+|
T Consensus       224 vvyt~~~q~er~~~~~~~~~~~~~-----y-~v~~~ll~~a~~~ai~mH~lP  269 (308)
T 1ml4_A          224 VLYVTRIQKERFPDEQEYLKVKGS-----Y-QVNLKVLEKAKDELRIMHPLP  269 (308)
T ss_dssp             EEEECCCCGGGSSSHHHHHTTTTC-----C-CBCTTGGGGSCTTCEEECCSC
T ss_pred             EEEECCccccccCCHHHHHHHhcC-----c-ccCHHHHhhcCCCCEEECCCC
Confidence            8887655332     333332222     3 47777   3457885 66666

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=84.27  E-value=1.4  Score=45.27  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=57.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cc--hhhHHHHHhhCCcccccceeeeccccc--cceeEEE--EcC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--IC--KDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VGD  533 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~--~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg~  533 (639)
                      ..+|.++|. |  .+|+++|+.|.+.|. +|++  |+  +++.+.+++. +      +...++.++  ++++++|  |.+
T Consensus        24 ~~~I~iIG~-G--~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-g------~~~~~~~~e~~~~aDvVi~~vp~   93 (312)
T 3qsg_A           24 AMKLGFIGF-G--EAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-G------VSCKASVAEVAGECDVIFSLVTA   93 (312)
T ss_dssp             -CEEEEECC-S--HHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-T------CEECSCHHHHHHHCSEEEECSCT
T ss_pred             CCEEEEECc-c--HHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-C------CEEeCCHHHHHhcCCEEEEecCc
Confidence            457999997 5  999999999999999 8988  54  4666666543 1      112334443  6676655  222


Q ss_pred             cCChh---h-hhcCCCCceeecccccCCc
Q 006607          534 DLTGK---E-QARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       534 ~~~~~---~-q~~a~~G~~f~~~~~~~~~  558 (639)
                      ....+   + ...+++|+++++.|.++|.
T Consensus        94 ~~~~~~~~~l~~~l~~~~ivvd~st~~~~  122 (312)
T 3qsg_A           94 QAALEVAQQAGPHLCEGALYADFTSCSPA  122 (312)
T ss_dssp             TTHHHHHHHHGGGCCTTCEEEECCCCCHH
T ss_pred             hhHHHHHHhhHhhcCCCCEEEEcCCCCHH
Confidence            22111   1 2346799999999988776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	639
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.65
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.62
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.76
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.72
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.69
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.66
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.64
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.64
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.61
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.54
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.54
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.49
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.45
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.44
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.44
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.43
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.43
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.42
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.41
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.39
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.39
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.37
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.37
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.37
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.36
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.35
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.32
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.3
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.29
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.24
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.23
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.21
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.16
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.15
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.15
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.15
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.14
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.99
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	95.98
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	95.97
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.91
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.88
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	95.79
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	95.77
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.68
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.64
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.64
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	95.53
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.5
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.46
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.45
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.44
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.38
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	95.3
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.23
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.2
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.09
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.07
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.05
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	94.94
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	94.92
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.91
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	94.8
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	94.73
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.69
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	94.56
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.5
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.49
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	94.41
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.37
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.35
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.31
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.25
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	94.2
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	94.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	93.96
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	93.95
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	93.94
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.89
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.8
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.75
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	93.61
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	93.4
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	93.35
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	93.35
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.21
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.94
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	92.89
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.88
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.87
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.8
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.78
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.77
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	92.69
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.6
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	92.56
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.55
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	92.47
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.33
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	92.11
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.06
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.06
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	92.02
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.81
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	91.69
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	91.59
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	91.52
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	91.44
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.39
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.34
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	91.32
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	91.31
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	91.29
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	91.23
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	91.23
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	91.11
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	91.05
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	91.0
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	91.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	90.95
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.6
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	90.6
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	90.48
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	90.34
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.23
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	90.13
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	90.12
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	89.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	89.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	89.87
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	89.79
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	89.64
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	89.46
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.3
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	89.29
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.9
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.72
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.44
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	88.07
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	88.04
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	88.01
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.76
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.54
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	87.49
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	87.18
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	87.1
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	86.65
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	86.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	86.11
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	86.1
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	86.03
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	85.98
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	85.9
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	85.85
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	85.84
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	84.58
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	84.39
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	84.19
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	83.68
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	83.55
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.38
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	83.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	82.24
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	81.69
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	81.55
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	81.25
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	80.12

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.65  E-value=2.9e-05  Score=71.31  Aligned_cols=89  Identities=18%  Similarity=0.194  Sum_probs=66.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEcC---
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVGD---  533 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg~---  533 (639)
                      ..++|+++|+ |  .+|+.+|+.|..+|. ++++  |+.++-++|.++.+...    +...++.+  .+++++|...   
T Consensus        23 ~~~~ilviGa-G--~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~----~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          23 HDKTVLVVGA-G--EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA----VRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             TTCEEEEESC-C--HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE----CCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCeEEEECC-C--HHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc----ccchhHHHHhccCCEEEEecCCC
Confidence            6889999999 7  999999999999998 5777  88899999988865332    12334443  6778888332   


Q ss_pred             --cCChhhhhcC------CCCceeecccccCCc
Q 006607          534 --DLTGKEQARA------PKGTIFIPYTQIPPR  558 (639)
Q Consensus       534 --~~~~~~q~~a------~~G~~f~~~~~~~~~  558 (639)
                        .++.++.+.+      .++.+|+|.+ +|+.
T Consensus        96 ~~ii~~~~i~~~~~~r~~~~~~~iiDla-vPr~  127 (159)
T d1gpja2          96 HPVIHVDDVREALRKRDRRSPILIIDIA-NPRD  127 (159)
T ss_dssp             SCCBCHHHHHHHHHHCSSCCCEEEEECC-SSCS
T ss_pred             CccccHhhhHHHHHhcccCCCeEEEeec-CCCC
Confidence              4777776433      3567999998 7765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.62  E-value=3.8e-05  Score=71.72  Aligned_cols=94  Identities=14%  Similarity=0.084  Sum_probs=68.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee--eecc---ccc--cceeEEE--
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV--LSTS---YAA--HKTKIWL--  530 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~--~~~~---~~~--~~~~vwi--  530 (639)
                      ..+.|+++|++|  -||+++|+.|.++|-+|.+  |++++.+++.+++..+......  .+++   +++  .+++++|  
T Consensus        22 ~gK~vlItGasg--GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          22 KGKKAVVLAGTG--PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCH--HHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            578999999998  9999999999999999999  9999999999887665543322  3333   332  6778887  


Q ss_pred             Ec---CcCChhhhhcCCCCceeecccccCC
Q 006607          531 VG---DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       531 vg---~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                      +|   ..+++|+.+....--++.++.-+++
T Consensus       100 Ag~g~~~~~~e~~~~~~~~nv~~~~~~~~~  129 (191)
T d1luaa1         100 GAIGLELLPQAAWQNESSIEIVADYNAQPP  129 (191)
T ss_dssp             CCTTCCCBCHHHHHTCTTCCEEEECCCSSS
T ss_pred             CccccccCCHHHHHhhhcceeehhHhhHHH
Confidence            23   3456677666666655666554444

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.76  E-value=0.00092  Score=61.94  Aligned_cols=90  Identities=11%  Similarity=0.151  Sum_probs=71.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeec--cccc--cceeEEE------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYAA--HKTKIWL------  530 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~--~~~~--~~~~vwi------  530 (639)
                      -++|++.|+-   -.|..-++...+-|-+|..  .+.++++++++..+.....  ....  .+++  +++|++|      
T Consensus        32 pa~V~ViGaG---vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~--~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          32 PGKVVILGGG---VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL--LYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE--EECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CcEEEEECCC---hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccccee--ehhhhhhHHHhhccCcEEEEeeecC
Confidence            5799999998   8999999999999999999  8889999998875443211  1122  2443  7888888      


Q ss_pred             ---EcCcCChhhhhcCCCCceeecccccCCc
Q 006607          531 ---VGDDLTGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       531 ---vg~~~~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                         .-+.|+.+..++|+||++.+|++ ++.-
T Consensus       107 G~~aP~lIt~~mv~~Mk~GSVIVDva-idqG  136 (168)
T d1pjca1         107 GRRAPILVPASLVEQMRTGSVIVDVA-VDQG  136 (168)
T ss_dssp             TSSCCCCBCHHHHTTSCTTCEEEETT-CTTC
T ss_pred             CcccCeeecHHHHhhcCCCcEEEEee-cCCC
Confidence               55789999999999999999999 6654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.72  E-value=0.00075  Score=65.79  Aligned_cols=45  Identities=16%  Similarity=0.193  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -|.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~   52 (258)
T d1ae1a_           6 GTTALVTGGSK--GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE   52 (258)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            56899999997  9999999999999999999  999999998887644

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.69  E-value=0.0009  Score=65.46  Aligned_cols=46  Identities=17%  Similarity=0.257  Sum_probs=41.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++.+
T Consensus         4 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~   51 (272)
T d1xkqa_           4 SNKTVIITGSSN--GIGRTTAILFAQEGANVTITGRSSERLEETRQIILK   51 (272)
T ss_dssp             TTCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCcCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456789999997  9999999999999999999  999999999888644

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.66  E-value=0.0006  Score=60.40  Aligned_cols=45  Identities=18%  Similarity=0.187  Sum_probs=40.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      +|.++|.+|  .+|+|+|+.|++.|.+|++  |++|+.+++.+++....
T Consensus         2 ki~vigGaG--~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTG--NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            578998888  8999999999999999999  99999999999876544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.64  E-value=0.0011  Score=64.35  Aligned_cols=46  Identities=13%  Similarity=0.128  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         9 enKvalITGas~--GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   56 (251)
T d2c07a1           9 ENKVALVTGAGR--GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS   56 (251)
T ss_dssp             SSCEEEEESTTS--HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh
Confidence            456788999997  9999999999999999999  999999999888644

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.64  E-value=0.00096  Score=59.25  Aligned_cols=46  Identities=26%  Similarity=0.301  Sum_probs=41.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      +++|+++|| |  .+|+.+|+.|+++|.+|++  |++++.++++++.+...
T Consensus         2 ~K~IliiGa-G--~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~   49 (182)
T d1e5qa1           2 TKSVLMLGS-G--FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHST   49 (182)
T ss_dssp             CCEEEEECC-S--TTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccc
Confidence            578999998 6  9999999999999999999  99999999999866533

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.61  E-value=0.0014  Score=63.46  Aligned_cols=47  Identities=15%  Similarity=0.205  Sum_probs=42.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+.
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~   54 (244)
T d1nffa_           6 GKVALVSGGAR--GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA   54 (244)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcc
Confidence            47789999997  9999999999999999999  99999999999976543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00099  Score=61.73  Aligned_cols=37  Identities=11%  Similarity=0.125  Sum_probs=32.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      -++|+|+||||  .||+++++.|.++|.+|+.  |+.+++.
T Consensus         3 ~kkIlV~GatG--~iG~~v~~~Ll~~g~~V~~~~R~~~~~~   41 (205)
T d1hdoa_           3 VKKIAIFGATG--QTGLTTLAQAVQAGYEVTVLVRDSSRLP   41 (205)
T ss_dssp             CCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCGGGSC
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEEcChhhcc
Confidence            46799999999  9999999999999999988  7777654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.54  E-value=0.0017  Score=63.29  Aligned_cols=47  Identities=13%  Similarity=0.177  Sum_probs=41.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.++++.+.
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~   53 (254)
T d1hdca_           5 GKTVIITGGAR--GLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAA   53 (254)
T ss_dssp             CSEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGE
T ss_pred             CCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCce
Confidence            46789999997  9999999999999999999  99999999999876443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0014  Score=63.75  Aligned_cols=47  Identities=26%  Similarity=0.299  Sum_probs=42.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +.+.|+++|+++  -||+++|+.|+++|.+|.+  |++++++++++++...
T Consensus         9 k~Kv~lITGas~--GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~   57 (257)
T d1xg5a_           9 RDRLALVTGASG--GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA   57 (257)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            357899999997  9999999999999999999  9999999998886554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.45  E-value=0.0014  Score=63.74  Aligned_cols=45  Identities=13%  Similarity=0.196  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..
T Consensus         8 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   54 (259)
T d2ae2a_           8 GCTALVTGGSR--GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS   54 (259)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999999888654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.44  E-value=0.0014  Score=64.24  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   50 (274)
T d1xhla_           4 GKSVIITGSSN--GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILK   50 (274)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            46789999997  9999999999999999999  999999999888644

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0013  Score=63.88  Aligned_cols=46  Identities=15%  Similarity=0.228  Sum_probs=41.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus        10 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~   57 (255)
T d1fmca_          10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ   57 (255)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            356889999997  9999999999999999999  999999999888654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.43  E-value=0.0033  Score=59.46  Aligned_cols=147  Identities=16%  Similarity=0.177  Sum_probs=83.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE---EcCcCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  536 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~  536 (639)
                      +.++|.+.| .|  +||+.+|++|.+.|.+|++  .++++.+..... ..+.    +...++-+.+|+|.+   .|..|+
T Consensus        26 ~gk~v~IqG-~G--~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-g~~~----~~~~~~~~~~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          26 DGLTVLVQG-LG--AVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-GHTA----VALEDVLSTPCDVFAPCAMGGVIT   97 (201)
T ss_dssp             TTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE----CCGGGGGGCCCSEEEECSCSCCBC
T ss_pred             CCCEEEEEC-CC--HHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-cccc----cCccccccccceeeeccccccccc
Confidence            457899999 55  9999999999999999999  555665544332 1111    101111125788887   677788


Q ss_pred             hhhhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhhHHHHHHHH----HhcCCCCCc
Q 006607          537 GKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDLNE  612 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~v~----alEgw~~~e  612 (639)
                      ++...+.+-- .++--+.-|...-..|=...+.+.+.+|+                 +.+-|||++.    .+.+|++.|
T Consensus        98 ~~~a~~i~ak-~i~e~AN~p~~~~~~~~~L~~rgI~~iPD-----------------~laNAGGVi~~~~~~~~~~~~~~  159 (201)
T d1c1da1          98 TEVARTLDCS-VVAGAANNVIADEAASDILHARGILYAPD-----------------FVANAGGAIHLVGREVLGWSESV  159 (201)
T ss_dssp             HHHHHHCCCS-EECCSCTTCBCSHHHHHHHHHTTCEECCH-----------------HHHTTHHHHHHHHHHTTCCCHHH
T ss_pred             HHHHhhhhhh-eeeccCCCCcchhhHHHHhcccceEEEeh-----------------hhhccchHHHHHHHHHcCCCHHH
Confidence            8777655321 11111111100000000111222222333                 2245666654    346888887


Q ss_pred             cch-h---hhhHHHHHHHHHhcCCcc
Q 006607          613 CGQ-T---MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       613 ~G~-i---v~~i~~iw~aa~kHGF~p  634 (639)
                      +-+ +   .+.+.+|++.|.++|=.|
T Consensus       160 v~~~l~~i~~~~~~i~~~a~~~~~~~  185 (201)
T d1c1da1         160 VHERAVAIGDTLNQVFEISDNDGVTP  185 (201)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence            554 3   489999999999998433

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.43  E-value=0.004  Score=56.60  Aligned_cols=90  Identities=14%  Similarity=0.129  Sum_probs=58.9

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc---cceeEEE--
Q 006607          458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA---HKTKIWL--  530 (639)
Q Consensus       458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~---~~~~vwi--  530 (639)
                      .+....++|++.||-|   .|||++.+|.+.|.++.+  |+++|.++|.+.......   +...++.+   .+++++|  
T Consensus        13 ~~~~~~k~vlIlGaGG---aarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~---~~~~~~~~~~~~~~dliIN~   86 (170)
T d1nyta1          13 SFIRPGLRILLIGAGG---ASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGS---IQALSMDELEGHEFDLIINA   86 (170)
T ss_dssp             TCCCTTCEEEEECCSH---HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSS---EEECCSGGGTTCCCSEEEEC
T ss_pred             CCCCCCCEEEEECCcH---HHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccc---ccccccccccccccceeecc
Confidence            3444567899999986   599999999999999888  999999999988665432   22333332   5667777  


Q ss_pred             --EcCc--CChhhhhcCCCCceeeccc
Q 006607          531 --VGDD--LTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       531 --vg~~--~~~~~q~~a~~G~~f~~~~  553 (639)
                        +|-.  ..+.+....++++.+.|+.
T Consensus        87 Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          87 TSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             CSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             cccCcccCCCCCcHHHhccCcEEEEee
Confidence              2211  1111222345566666665

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.0016  Score=62.69  Aligned_cols=46  Identities=17%  Similarity=0.255  Sum_probs=41.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+
T Consensus         4 gK~alITGas~--GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~   51 (243)
T d1q7ba_           4 GKIALVTGASR--GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN   51 (243)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Confidence            46789999997  9999999999999999999  9999999999887543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.41  E-value=0.0018  Score=63.52  Aligned_cols=45  Identities=20%  Similarity=0.254  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+  |++|++++++++.+.
T Consensus         5 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~   51 (276)
T d1bdba_           5 GEAVLITGGAS--GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD   51 (276)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence            47899999997  9999999999999999999  999999999888654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.39  E-value=0.0014  Score=63.43  Aligned_cols=47  Identities=13%  Similarity=0.168  Sum_probs=41.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++..+++.++.
T Consensus         5 gK~~lITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~   53 (251)
T d1vl8a_           5 GRVALVTGGSR--GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY   53 (251)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh
Confidence            46789999997  8999999999999999999  99999998888765543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.39  E-value=0.0016  Score=63.18  Aligned_cols=46  Identities=17%  Similarity=0.265  Sum_probs=40.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      ..|.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~   51 (264)
T d1spxa_           4 AEKVAIITGSSN--GIGRATAVLFAREGAKVTITGRHAERLEETRQQILA   51 (264)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            456789999997  9999999999999999999  999999999888643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.37  E-value=0.0015  Score=63.33  Aligned_cols=47  Identities=23%  Similarity=0.195  Sum_probs=41.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +-+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.+
T Consensus         5 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~   53 (253)
T d1hxha_           5 QGKVALVTGGAS--GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER   53 (253)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC
Confidence            346789999997  9999999999999999999  9999999999987653

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0017  Score=62.81  Aligned_cols=44  Identities=18%  Similarity=0.206  Sum_probs=40.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +.++++|+++  -||+++|+.|+++|.+|.+  |++|+++++++++..
T Consensus         8 kv~lITGas~--GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~   53 (244)
T d1yb1a_           8 EIVLITGAGH--GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG   53 (244)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            5788899997  9999999999999999999  999999999998654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.37  E-value=0.0017  Score=62.75  Aligned_cols=43  Identities=21%  Similarity=0.227  Sum_probs=38.6

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -++++|+++  =||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 ValITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~   47 (255)
T d1gega_           3 VALVTGAGQ--GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ   47 (255)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             EEEEcCCcc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            358889996  8999999999999999999  999999999988654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.36  E-value=0.002  Score=62.47  Aligned_cols=46  Identities=20%  Similarity=0.245  Sum_probs=41.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |++|+++++.++++.+
T Consensus         5 gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   52 (256)
T d1k2wa_           5 GKTALITGSAR--GIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA   52 (256)
T ss_dssp             TEEEEEETCSS--HHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCc
Confidence            46789999997  9999999999999999999  9999999999987543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.35  E-value=0.0016  Score=63.41  Aligned_cols=47  Identities=13%  Similarity=0.213  Sum_probs=41.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +.+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         7 kgK~alVTGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~   55 (259)
T d1xq1a_           7 KAKTVLVTGGTK--GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK   55 (259)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            457899999997  9999999999999999999  9999999998886543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0018  Score=62.42  Aligned_cols=46  Identities=20%  Similarity=0.300  Sum_probs=41.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .-+.|+++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         6 ~GK~~lITGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~   53 (244)
T d1pr9a_           6 AGRRVLVTGAGK--GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG   53 (244)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC
Confidence            347899999997  9999999999999999999  999999999998764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.30  E-value=0.002  Score=62.51  Aligned_cols=46  Identities=20%  Similarity=0.254  Sum_probs=41.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +-+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 ~gK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (260)
T d1zema1           4 NGKVCLVTGAGG--NIGLATALRLAEEGTAIALLDMNREALEKAEASVRE   51 (260)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            356789999997  9999999999999999998  999999999988654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.29  E-value=0.0017  Score=63.52  Aligned_cols=47  Identities=13%  Similarity=0.162  Sum_probs=41.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++..+.
T Consensus        25 gK~alITGas~--GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~   73 (294)
T d1w6ua_          25 GKVAFITGGGT--GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT   73 (294)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc
Confidence            47899999997  9999999999999999999  99999998887765544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.24  E-value=0.0016  Score=63.12  Aligned_cols=47  Identities=15%  Similarity=0.210  Sum_probs=40.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      .|.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++.++.
T Consensus         9 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~   57 (260)
T d1h5qa_           9 NKTIIVTGGNR--GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF   57 (260)
T ss_dssp             TEEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh
Confidence            47889999997  9999999999999999999  88888888877765443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0016  Score=63.39  Aligned_cols=46  Identities=20%  Similarity=0.270  Sum_probs=41.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      -+.++++||++  -||+|+|+.|+++|.+|.+  |++|+++++++++...
T Consensus        14 GK~alITGass--GIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~   61 (269)
T d1xu9a_          14 GKKVIVTGASK--GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL   61 (269)
T ss_dssp             TCEEEESSCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh
Confidence            47899999997  9999999999999999999  9999999998885443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.21  E-value=0.0033  Score=60.31  Aligned_cols=45  Identities=9%  Similarity=0.143  Sum_probs=41.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++.++++.
T Consensus         5 gK~alItGas~--GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   51 (241)
T d2a4ka1           5 GKTILVTGAAS--GIGRAALDLFAREGASLVAVDREERLLAEAVAALEA   51 (241)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence            46789999997  9999999999999999999  999999999888764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.20  E-value=0.0025  Score=61.56  Aligned_cols=47  Identities=19%  Similarity=0.187  Sum_probs=41.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |++|+++++++++..+
T Consensus         5 ~gK~alVTGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~   53 (251)
T d1zk4a1           5 DGKVAIITGGTL--GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP   53 (251)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC
Confidence            357889999997  9999999999999999999  9999999999886543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.16  E-value=0.0028  Score=61.31  Aligned_cols=144  Identities=17%  Similarity=0.142  Sum_probs=89.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE---EcCcCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL---VGDDLT  536 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi---vg~~~~  536 (639)
                      +.++|++-|--   +||+.+|+.|.+.|-+++.  .++++.+.+..+...+.-.    ..++-+.+|||.+   .|..|+
T Consensus        38 ~g~~v~IqG~G---nVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~----~~~~~~~~cDIl~PcA~~~~I~  110 (230)
T d1leha1          38 EGLAVSVQGLG---NVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVA----PNAIYGVTCDIFAPCALGAVLN  110 (230)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECC----GGGTTTCCCSEEEECSCSCCBS
T ss_pred             CCCEEEEECCC---HHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccC----CcccccccccEecccccccccC
Confidence            46789999987   9999999999999999999  6777777776664332210    0111125788877   555566


Q ss_pred             hhhhhcCCCCceeecccccCCcCCCCCceeecCCccccCCCCccccccccccCcchhhh----HHHHHHHH-Hhc--CCC
Q 006607          537 GKEQARAPKGTIFIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSA----WRIAGIIH-ALE--GWD  609 (639)
Q Consensus       537 ~~~q~~a~~G~~f~~~~~~~~~~~R~dc~y~~~~a~~~P~~~~~~~~~e~~~pr~~~~A----c~a~~~v~-alE--gw~  609 (639)
                      ++.-.+.                   .|.+.-.+|=.-|.+-+.   .+.-..|+++++    +-|||++- ++|  +|+
T Consensus       111 ~~~~~~l-------------------~ak~Ive~ANn~~t~~ea---~~~L~~rGI~~iPD~laNAGGVi~s~~E~~~~~  168 (230)
T d1leha1         111 DFTIPQL-------------------KAKVIAGSADNQLKDPRH---GKYLHELGIVYAPDYVINAGGVINVADELYGYN  168 (230)
T ss_dssp             TTHHHHC-------------------CCSEECCSCSCCBSSHHH---HHHHHHHTCEECCHHHHTTHHHHHHHHGGGCCC
T ss_pred             hHHhhcc-------------------CccEEEecccCCCCCchH---HHHHHhhCcEEEeehhhcccchhhhhhhhhCCC
Confidence            5554333                   255555554111111110   011224455544    56677665 555  777


Q ss_pred             CCccch-h---hhhHHHHHHHHHhcCCcc
Q 006607          610 LNECGQ-T---MCDIHQVWHASLRHGFRP  634 (639)
Q Consensus       610 ~~e~G~-i---v~~i~~iw~aa~kHGF~p  634 (639)
                      +++.=+ +   .+.+++|++.|.++|-.|
T Consensus       169 ~~~~~~~l~~I~~~~~~vl~~a~~~~~~~  197 (230)
T d1leha1         169 RTRAMKRVDGIYDSIEKIFAISKRDGVPS  197 (230)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence            666433 3   589999999999999654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0026  Score=63.19  Aligned_cols=46  Identities=13%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++..+++..
T Consensus        11 ~gKvalITGas~--GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~   58 (297)
T d1yxma1          11 QGQVAIVTGGAT--GIGKAIVKELLELGSNVVIASRKLERLKSAADELQA   58 (297)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            457889999997  9999999999999999999  999999888777543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.15  E-value=0.0034  Score=60.33  Aligned_cols=45  Identities=13%  Similarity=0.229  Sum_probs=40.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.++++|+++  -||+++|+.|+++|.+|.+  |++++++++++++..
T Consensus         5 gK~~lITGas~--GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~   51 (242)
T d1ulsa_           5 DKAVLITGAAH--GIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA   51 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC
Confidence            47889999997  8999999999999999999  999999999888754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.15  E-value=0.0029  Score=61.17  Aligned_cols=44  Identities=14%  Similarity=0.204  Sum_probs=39.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      |-++++|+++  =||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         3 KValITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~   48 (257)
T d2rhca1           3 EVALVTGATS--GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE   48 (257)
T ss_dssp             CEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            4458889997  8999999999999999999  999999999888654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0033  Score=60.71  Aligned_cols=45  Identities=22%  Similarity=0.176  Sum_probs=40.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -|.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++.+
T Consensus         3 GKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~   49 (254)
T d2gdza1           3 GKVALVTGAAQ--GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE   49 (254)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
Confidence            36789999997  8999999999999999999  999999988887654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0032  Score=60.99  Aligned_cols=46  Identities=13%  Similarity=0.212  Sum_probs=41.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +-+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 ~GK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~   52 (250)
T d1ydea1           5 AGKVVVVTGGGR--GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG   52 (250)
T ss_dssp             TTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            356799999997  9999999999999999999  999999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.99  E-value=0.0027  Score=61.07  Aligned_cols=44  Identities=20%  Similarity=0.325  Sum_probs=37.4

Q ss_pred             cE-EEEecccCchhhHHHHHHHHhccCcE-------EEe--cchhhHHHHHhhCCc
Q 006607          464 AH-VLLRGTVTANKVANAVASSLCQMGIK-------VAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       464 ~~-V~~~Gatg~~kig~ava~~L~~~~~~-------v~~--~~~~~~~~l~~~~~~  509 (639)
                      |+ |+++|+++  -||+|+|+.|+++|.+       |.+  |++++++++++++..
T Consensus         1 K~VvlITGas~--GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~   54 (240)
T d2bd0a1           1 KHILLITGAGK--GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA   54 (240)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT
T ss_pred             CCEEEEccCCC--HHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh
Confidence            46 46789996  8999999999999987       666  999999999988654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.98  E-value=0.0029  Score=60.62  Aligned_cols=45  Identities=11%  Similarity=0.082  Sum_probs=38.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccC--cEEEe--cchhhHHHHHhhCCcc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~--~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +.|+++||++  -||+++|+.|+++|  ++|.+  |+++++++++++.+.+
T Consensus         4 KtilITGass--GIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~   52 (250)
T d1yo6a1           4 GSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR   52 (250)
T ss_dssp             SEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTT
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCc
Confidence            7899999996  99999999999998  57776  9999999998775543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.0033  Score=60.42  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=40.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+++++++++++++.
T Consensus         5 GK~alITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~   51 (242)
T d1cyda_           5 GLRALVTGAGK--GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG   51 (242)
T ss_dssp             TCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTT
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCC
Confidence            36789999997  8999999999999999999  999999999998754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.91  E-value=0.0028  Score=61.32  Aligned_cols=47  Identities=13%  Similarity=0.304  Sum_probs=39.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~~~~  511 (639)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |+ +++++++++++..+.
T Consensus         4 gK~alITGas~--GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~   53 (260)
T d1x1ta1           4 GKVAVVTGSTS--GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH   53 (260)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc
Confidence            35788999997  8999999999999999999  54 678888888765544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.88  E-value=0.0041  Score=60.37  Aligned_cols=45  Identities=22%  Similarity=0.273  Sum_probs=40.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      .+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++++++..
T Consensus         4 gK~alITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~   50 (258)
T d1iy8a_           4 DRVVLITGGGS--GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE   50 (258)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence            46789999997  9999999999999999999  999999988887544

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=95.79  E-value=0.0047  Score=59.92  Aligned_cols=47  Identities=19%  Similarity=0.253  Sum_probs=41.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      +.+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++...
T Consensus         5 ~gKvalITGas~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~   53 (268)
T d2bgka1           5 QDKVAIITGGAG--GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP   53 (268)
T ss_dssp             TTCEEEEESTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT
T ss_pred             CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC
Confidence            456789999997  9999999999999999999  9999999999987553

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.77  E-value=0.0051  Score=59.64  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~  509 (639)
                      -+.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++.+++.+
T Consensus        18 gK~~lITGas~--GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~   65 (272)
T d1g0oa_          18 GKVALVTGAGR--GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK   65 (272)
T ss_dssp             TCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh
Confidence            47899999997  9999999999999999988   456777877776543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.68  E-value=0.0048  Score=58.89  Aligned_cols=48  Identities=17%  Similarity=0.327  Sum_probs=38.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhH-HHHHhhCCcc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY-EKLKLRIPVE  510 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~-~~l~~~~~~~  510 (639)
                      -|.|+++||.|++-||+|||+.|+++|.+|.+  |++++. ++++++++.+
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~   56 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK   56 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCc
Confidence            46799999876234999999999999999999  777776 5576665543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.004  Score=59.26  Aligned_cols=47  Identities=13%  Similarity=0.118  Sum_probs=41.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~  511 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |++++++++.+++....
T Consensus         5 GKvalITGas~--GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~   53 (248)
T d2o23a1           5 GLVAVITGGAS--GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNC   53 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCc
Confidence            35678999997  8999999999999999999  99999999998876543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.64  E-value=0.0057  Score=58.97  Aligned_cols=48  Identities=17%  Similarity=0.198  Sum_probs=40.3

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCc
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  509 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~  509 (639)
                      |-.-|.|+++|+++  -||+|+|+.|+++|.+|.+   ++++..+++++++..
T Consensus         3 ~L~GK~alITGas~--GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~   53 (259)
T d1ja9a_           3 PLAGKVALTTGAGR--GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK   53 (259)
T ss_dssp             TTTTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH
Confidence            44557899999997  9999999999999999987   677778888887644

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.0037  Score=60.10  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=39.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~  509 (639)
                      -+.|+++|+++  -||+|||+.|+++|.+|.+  |+++++++++++.+.
T Consensus         6 gK~alITGas~--GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~   52 (245)
T d2ag5a1           6 GKVIILTAAAQ--GIGQAAALAFAREGAKVIATDINESKLQELEKYPGI   52 (245)
T ss_dssp             TCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTE
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCC
Confidence            46789999997  9999999999999999999  999998888776543

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.50  E-value=0.0052  Score=59.09  Aligned_cols=42  Identities=26%  Similarity=0.341  Sum_probs=36.7

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCc
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV  509 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~  509 (639)
                      |+++|+++  -||+|+|+.|+++|.+|.+   |++++.+++++++..
T Consensus         4 ~lITGas~--GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~   48 (244)
T d1edoa_           4 VVVTGASR--GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA   48 (244)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             EEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH
Confidence            67889997  9999999999999999987   788889988888643

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.46  E-value=0.0095  Score=53.15  Aligned_cols=82  Identities=16%  Similarity=0.140  Sum_probs=53.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEEc-------Cc
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLVG-------DD  534 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwivg-------~~  534 (639)
                      +|.++|+ |  .+|+++|+.|++.|.+|+.  |++++.++.+++-....     ..+..++ ++++++|+-       +.
T Consensus         2 kI~iIG~-G--~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~DiIilavp~~~~~~v   73 (165)
T d2f1ka2           2 KIGVVGL-G--LIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDE-----AGQDLSLLQTAKIIFLCTPIQLILPT   73 (165)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSE-----EESCGGGGTTCSEEEECSCHHHHHHH
T ss_pred             EEEEEee-c--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccce-----eeeecccccccccccccCcHhhhhhh
Confidence            4788888 5  9999999999999999999  88888887766521111     0123454 788776641       12


Q ss_pred             CChhhhhcCCCCceeeccccc
Q 006607          535 LTGKEQARAPKGTIFIPYTQI  555 (639)
Q Consensus       535 ~~~~~q~~a~~G~~f~~~~~~  555 (639)
                      +. +-....++++++++.+-+
T Consensus        74 l~-~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          74 LE-KLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HH-HHGGGSCTTCEEEECCSC
T ss_pred             hh-hhhhhcccccceeecccc
Confidence            21 112235777777777543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.45  E-value=0.011  Score=58.42  Aligned_cols=43  Identities=28%  Similarity=0.298  Sum_probs=37.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +-+.|+|+|++|  =||+.++..|.++|.+|..  |+.++.+.+++.
T Consensus        10 ~gk~VlVTG~sG--fIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~   54 (342)
T d1y1pa1          10 EGSLVLVTGANG--FVASHVVEQLLEHGYKVRGTARSASKLANLQKR   54 (342)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred             CcCEEEEECCCC--HHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh
Confidence            357999999999  9999999999999999865  888888777654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.44  E-value=0.0074  Score=57.95  Aligned_cols=46  Identities=20%  Similarity=0.231  Sum_probs=39.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhc---cCcEEEe--cchhhHHHHHhhCCcc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~---~~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      .+-++++|+++  =||+++|+.|+|   +|.+|.+  |++++++++++++..+
T Consensus         6 gKvalITGas~--GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~   56 (259)
T d1oaaa_           6 CAVCVLTGASR--GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ   56 (259)
T ss_dssp             SEEEEESSCSS--HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            34567889996  899999999996   8999999  9999999999886543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.38  E-value=0.0082  Score=54.43  Aligned_cols=63  Identities=21%  Similarity=0.209  Sum_probs=46.0

Q ss_pred             cCcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccccceeEEE
Q 006607          458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTKIWL  530 (639)
Q Consensus       458 ~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~vwi  530 (639)
                      .+++ .++|++.|+-|   .|+|++.+|++.|+ ++.+  |++++-++|++..+...      +.++...+++++|
T Consensus        13 ~~~~-~~~vlIlGaGG---aarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~------~~~~~~~~~DliI   78 (167)
T d1npya1          13 HLNK-NAKVIVHGSGG---MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY------INSLENQQADILV   78 (167)
T ss_dssp             TCCT-TSCEEEECSST---THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE------ESCCTTCCCSEEE
T ss_pred             CCCC-CCeEEEECCCH---HHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh------hhcccccchhhhe
Confidence            3443 46899999975   69999999999997 5666  99999999988755433      2222224567777

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=95.30  E-value=0.0084  Score=59.21  Aligned_cols=37  Identities=8%  Similarity=0.151  Sum_probs=32.2

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      +.+++|+|+||||  -||+++|+.|.++|.+|..  |+.+.
T Consensus         1 ~~kktIlVtGatG--~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           1 QQKKTIAVVGATG--RQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCCEEEESTTS--HHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCCEEEEECCCh--HHHHHHHHHHHhCCCeEEEEECCcch
Confidence            3578999999999  9999999999999999887  66543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.23  E-value=0.0047  Score=55.87  Aligned_cols=40  Identities=20%  Similarity=0.167  Sum_probs=31.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcE--EEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIK--VAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~--v~~--~~~~~~~~l~  504 (639)
                      -++|+|+|+||  -||+++++.|.++|.+  |..  |++++.+.+.
T Consensus         3 ~~tVlVtGatG--~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~   46 (252)
T d2q46a1           3 LPTVLVTGASG--RTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG   46 (252)
T ss_dssp             CCEEEEESTTS--TTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT
T ss_pred             CCEEEEECCcc--HHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc
Confidence            46899999999  9999999999999955  432  6776655443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.20  E-value=0.0073  Score=58.35  Aligned_cols=29  Identities=24%  Similarity=0.319  Sum_probs=27.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         1 ~KILVTGatG--fIGs~lv~~Ll~~g~~V~~   29 (338)
T d1orra_           1 AKLLITGGCG--FLGSNLASFALSQGIDLIV   29 (338)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5799999999  9999999999999999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.09  E-value=0.0095  Score=57.80  Aligned_cols=45  Identities=18%  Similarity=0.212  Sum_probs=37.4

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCCc
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPV  509 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~~  509 (639)
                      -+.++++|+++  -||+|+|+.|+++|.+|.+  |+ +++.+++++++..
T Consensus         7 gK~alITGas~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~   54 (261)
T d1geea_           7 GKVVVITGSST--GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK   54 (261)
T ss_dssp             TCEEEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh
Confidence            46789999997  8999999999999999999  65 4567777777543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.07  E-value=0.021  Score=49.26  Aligned_cols=40  Identities=28%  Similarity=0.378  Sum_probs=36.1

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      .|+++|. |  .+|+.+|+.|.++|.+|++  .|+++.++++++.
T Consensus         2 ~IvI~G~-G--~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~   43 (132)
T d1lssa_           2 YIIIAGI-G--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI   43 (132)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC
T ss_pred             EEEEECC-C--HHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh
Confidence            5899998 5  9999999999999999999  8899999887764

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0089  Score=57.91  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=38.4

Q ss_pred             cEE-EEecccCchhhHHHHHHHHhcc-CcEEEe--cchhhHHHHHhhCCcc
Q 006607          464 AHV-LLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLKLRIPVE  510 (639)
Q Consensus       464 ~~V-~~~Gatg~~kig~ava~~L~~~-~~~v~~--~~~~~~~~l~~~~~~~  510 (639)
                      ++| +++|+++  =||+++|+.|+++ |-+|.+  |++++.++..+++..+
T Consensus         3 ~rVAlVTGas~--GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~   51 (275)
T d1wmaa1           3 IHVALVTGGNK--GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE   51 (275)
T ss_dssp             CCEEEESSCSS--HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT
T ss_pred             CeEEEECCCCC--HHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            466 5779996  9999999999976 899999  9999999988886544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=94.94  E-value=0.02  Score=50.98  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=37.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      .+++.++|+-   .+|.++|..|.++|.+|.+  |++++.+++++.
T Consensus         1 sk~iaIiGaG---~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGLG---NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECcc---HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            4789999995   9999999999999999999  889999999876

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=94.92  E-value=0.046  Score=55.34  Aligned_cols=140  Identities=12%  Similarity=0.040  Sum_probs=89.9

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++-=-=|....|-.--+..+.-+++ +.-+-+.||+.+|+       |++.+-+ +++.+++.++|+-   ..|+
T Consensus        65 ~g~K~v~~~p~N~~~Glp~i~g~~~L~d~~TG~p~al~d~~~LTa~RTaA~salaa~~LA~~da~~l~iiG~G---~QA~  141 (340)
T d1x7da_          65 YAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGNG---AQSE  141 (340)
T ss_dssp             EEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---TTHH
T ss_pred             EEEEEEEECCCccccCCCcceEEEEEEECCCCCEEEEEcchhhhhhHHHHHHHHHHHHhhccCCceEEEEccc---HHHH
Confidence            466666543333322222222323333333 34588999999974       3444554 6788999999987   7899


Q ss_pred             HHHHHHh-ccCc-EEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEEc---C----cCChhhhhcCCCC
Q 006607          480 AVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLVG---D----DLTGKEQARAPKG  546 (639)
Q Consensus       480 ava~~L~-~~~~-~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwivg---~----~~~~~~q~~a~~G  546 (639)
                      .-+++++ -+++ +|.+  |++++-+++.+++....+..+..+.+.++  ++++|++.-   +    .++++   +.+||
T Consensus       142 ~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~~Pv~~~~---~l~pG  218 (340)
T d1x7da_         142 FQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPD---MLEPG  218 (340)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSEEEEECGG---GCCTT
T ss_pred             HHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCCCcccchh---hcCCC
Confidence            9999888 3444 4444  89999999999876655555334556774  778776621   1    44554   44999


Q ss_pred             ceeecccc
Q 006607          547 TIFIPYTQ  554 (639)
Q Consensus       547 ~~f~~~~~  554 (639)
                      +|+..+.-
T Consensus       219 ~hI~aiGs  226 (340)
T d1x7da_         219 MHLNAVGG  226 (340)
T ss_dssp             CEEEECSC
T ss_pred             CEEeeccc
Confidence            99988753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.91  E-value=0.012  Score=56.13  Aligned_cols=40  Identities=20%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      +-+.++++||+|+.=||+|+|+.|+++|.+|.+  |+++..+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~   48 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP   48 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH
Confidence            456899999997223999999999999999988  5544333

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.80  E-value=0.0094  Score=56.64  Aligned_cols=40  Identities=23%  Similarity=0.228  Sum_probs=34.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK  504 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~  504 (639)
                      .+.|+++|+++  -||+|+|+.|+++|.+|.+  |++|++++..
T Consensus         4 gK~~lVTGas~--GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~   45 (234)
T d1o5ia_           4 DKGVLVLAASR--GIGRAVADVLSQEGAEVTICARNEELLKRSG   45 (234)
T ss_dssp             TCEEEEESCSS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHTC
T ss_pred             CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHhcC
Confidence            46899999997  9999999999999999999  8887776543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=94.73  E-value=0.01  Score=56.97  Aligned_cols=47  Identities=15%  Similarity=0.275  Sum_probs=39.2

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCcccccc
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQHN  514 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~~~~  514 (639)
                      ++++|+++  -||+|+|+.|+++|.+|.+   +++++.+++++++.......
T Consensus         5 AlITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~   54 (284)
T d1e7wa_           5 ALVTGAAK--RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS   54 (284)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTC
T ss_pred             EEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCc
Confidence            36679996  8999999999999999987   77888999988876655444

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.033  Score=50.95  Aligned_cols=88  Identities=16%  Similarity=0.205  Sum_probs=68.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec--CcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL  535 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~  535 (639)
                      .-++|.|+|--   +||+.+|+.|...|-+|++.+.+....|+.....-.      +.++++  ..++++|  -|  +.|
T Consensus        23 ~Gk~v~V~GyG---~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~------v~~~~~a~~~adivvtaTGn~~vI   93 (163)
T d1li4a1          23 AGKVAVVAGYG---DVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE------VTTMDEACQEGNIFVTTTGCIDII   93 (163)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE------ECCHHHHTTTCSEEEECSSCSCSB
T ss_pred             cCCEEEEeccc---cccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE------eeehhhhhhhccEEEecCCCccch
Confidence            56789999866   999999999999999999977777888877732222      334443  5566666  34  579


Q ss_pred             ChhhhhcCCCCceeecccccCCc
Q 006607          536 TGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       536 ~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      +.|+.++|+.|++.+-...|+-+
T Consensus        94 ~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          94 LGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             CHHHHTTCCTTEEEEECSSSTTS
T ss_pred             hHHHHHhccCCeEEEEeccccce
Confidence            99999999999999998776554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=94.56  E-value=0.016  Score=55.49  Aligned_cols=36  Identities=19%  Similarity=0.269  Sum_probs=30.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      -+.++++|++|.+-||+|+|+.|+++|.+|.+  |+++
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~   42 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES   42 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            46789999987234999999999999999999  6653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.0044  Score=58.40  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=29.0

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cch
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICK  497 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~  497 (639)
                      ..++|+++||||  -||+.+++.|.++|.  +|..  |++
T Consensus        13 ~~k~IlItGaTG--~iG~~l~~~Ll~~g~~~~v~~~~R~~   50 (232)
T d2bkaa1          13 QNKSVFILGASG--ETGRVLLKEILEQGLFSKVTLIGRRK   50 (232)
T ss_dssp             TCCEEEEECTTS--HHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred             CCCEEEEECCCc--HHHHHHHHHHHhCCCCCEEEEEecCh
Confidence            567899999999  999999999998884  7777  544

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.49  E-value=0.011  Score=56.24  Aligned_cols=41  Identities=15%  Similarity=0.148  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHh---ccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLC---QMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~---~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      |+|+++||++  =||+++|+.|+   ++|.+|.+  |++++++++++.
T Consensus         3 KtilITGas~--GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~   48 (248)
T d1snya_           3 NSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL   48 (248)
T ss_dssp             SEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH
T ss_pred             CEEEEeCCCC--HHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence            5799999996  89999999985   68999999  999999988754

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.41  E-value=0.094  Score=52.18  Aligned_cols=140  Identities=11%  Similarity=0.046  Sum_probs=90.0

Q ss_pred             cCCcEEEecccccccccccCCceeeecCCC-CcceeeecCChhHH-------HHHHhcC-cCCCcEEEEecccCchhhHH
Q 006607          409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN  479 (639)
Q Consensus       409 ~G~kv~~LG~ln~~e~ln~~g~~~~~k~p~-~L~irvv~Gnslta-------a~v~~~i-~~~~~~V~~~Gatg~~kig~  479 (639)
                      .|+|+++.=-=|....+..-.++.+.-+++ +.-..+.||+.+|+       |++.+-+ +++.+.+.++|+-   ..|+
T Consensus        62 ~g~K~v~~~p~N~~~glp~~~g~i~L~d~~TG~p~Aild~~~lT~~RTaA~sala~~~la~~~~~~l~iiGaG---~QA~  138 (320)
T d1omoa_          62 AGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCG---TQAY  138 (320)
T ss_dssp             EEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECCS---HHHH
T ss_pred             ceEEEEEecccccccCcceEEEEEEEEecCCCcEEEEecccccccccchhHHHHHHHHhccCCccEEEEecCc---ccHH
Confidence            489988763333323333334456666665 45588999999975       4455544 5677888999887   8999


Q ss_pred             HHHHHHh--ccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEE-----cCcCChhhhhcCCCCcee
Q 006607          480 AVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV-----GDDLTGKEQARAPKGTIF  549 (639)
Q Consensus       480 ava~~L~--~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv-----g~~~~~~~q~~a~~G~~f  549 (639)
                      ..+++|+  +.-.+|.+  |++|+-+++.+++.... .. +..+.-++ ++++|++.     .-.++.+   +.+||+++
T Consensus       139 ~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~-~~-~~~~~~~a~~~aDiV~taT~s~~P~~~~~---~l~~G~hv  213 (320)
T d1omoa_         139 FQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-IS-ASVQPAEEASRCDVLVTTTPSRKPVVKAE---WVEEGTHI  213 (320)
T ss_dssp             HHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CC-EEECCHHHHTSSSEEEECCCCSSCCBCGG---GCCTTCEE
T ss_pred             HHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC-Cc-cccchhhhhccccEEEEeccCcccccchh---hcCCCCeE
Confidence            9999999  44446666  99999988887754322 11 22222334 77888772     1123333   45999998


Q ss_pred             ecccccC
Q 006607          550 IPYTQIP  556 (639)
Q Consensus       550 ~~~~~~~  556 (639)
                      .-+.-..
T Consensus       214 ~~iGs~~  220 (320)
T d1omoa_         214 NAIGADG  220 (320)
T ss_dssp             EECSCCS
T ss_pred             eecCCcc
Confidence            8886433

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.37  E-value=0.089  Score=48.83  Aligned_cols=105  Identities=12%  Similarity=0.029  Sum_probs=72.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccc------ccceee-------ec--------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA------QHNLVL-------ST--------  519 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~------~~~l~~-------~~--------  519 (639)
                      -++|++.|+-   -+|..-++...+-|-+|..  .+.++++++++..+.--      ..++..       .+        
T Consensus        29 pa~VvViGaG---vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          29 PARVLVFGVG---VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCEEEEECCS---HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CcEEEEEcCc---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            5799999998   8999999999999999999  77788888877633211      000000       00        


Q ss_pred             -cccc--cceeEEE---------EcCcCChhhhhcCCCCceeecccccCCc----CCCCCceeecCCc
Q 006607          520 -SYAA--HKTKIWL---------VGDDLTGKEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTPA  571 (639)
Q Consensus       520 -~~~~--~~~~vwi---------vg~~~~~~~q~~a~~G~~f~~~~~~~~~----~~R~dc~y~~~~a  571 (639)
                       .+.+  +++|++|         .=+.++++..++|+||++.+|++ ++.-    ..|.|=+|.+.++
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDva-idqGGn~Ets~~~~~~~~~gV  172 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA-VEAGGNCPLSEPGKIVVKHGV  172 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT-GGGTCSSTTCCTTCEEEETTE
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEe-ecCCCccccCcCCCEEEECCE
Confidence             1222  6788887         34469999999999999999999 6655    3344444444443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.35  E-value=0.018  Score=52.38  Aligned_cols=66  Identities=17%  Similarity=0.167  Sum_probs=48.2

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc--c-cceeEEE
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA--A-HKTKIWL  530 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~--~-~~~~vwi  530 (639)
                      ++...++|++.|+-|   .|+|++.+|++.+.++.+  |+.++.+++.+.+....  + +...+..  . .+++++|
T Consensus        14 ~~~~~k~vlIlGaGG---aarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~-~~~~~~~~~~~~~~diiI   84 (171)
T d1p77a1          14 WLRPNQHVLILGAGG---ATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--N-IQAVSMDSIPLQTYDLVI   84 (171)
T ss_dssp             CCCTTCEEEEECCSH---HHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--C-EEEEEGGGCCCSCCSEEE
T ss_pred             CCCCCCEEEEECCcH---HHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--c-cchhhhccccccccceee
Confidence            444677899999975   589999999998999888  99999999988865432  2 1122221  2 5667777

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.31  E-value=0.051  Score=49.65  Aligned_cols=88  Identities=14%  Similarity=0.134  Sum_probs=71.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec--CcC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG--DDL  535 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg--~~~  535 (639)
                      .-++|+|+|--   ++|+.||+.|...|-+|++...|....||... .++     ++.++++  ..++++|  -|  +.|
T Consensus        22 aGk~vvV~GYG---~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~m-dGf-----~v~~~~~a~~~aDi~vTaTGn~~vI   92 (163)
T d1v8ba1          22 SGKIVVICGYG---DVGKGCASSMKGLGARVYITEIDPICAIQAVM-EGF-----NVVTLDEIVDKGDFFITCTGNVDVI   92 (163)
T ss_dssp             TTSEEEEECCS---HHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TTC-----EECCHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCEEEEeccc---ccchhHHHHHHhCCCEEEEEecCchhhHHHHh-cCC-----ccCchhHccccCcEEEEcCCCCccc
Confidence            57799999987   99999999999999999997778888888864 333     3556553  6778877  23  468


Q ss_pred             ChhhhhcCCCCceeecccccCCc
Q 006607          536 TGKEQARAPKGTIFIPYTQIPPR  558 (639)
Q Consensus       536 ~~~~q~~a~~G~~f~~~~~~~~~  558 (639)
                      +.++.++|+.|++.|-.-+|+-+
T Consensus        93 ~~~h~~~MKdgaIl~N~GHfd~E  115 (163)
T d1v8ba1          93 KLEHLLKMKNNAVVGNIGHFDDE  115 (163)
T ss_dssp             CHHHHTTCCTTCEEEECSSTTTS
T ss_pred             cHHHHHHhhCCeEEEeccccchh
Confidence            99999999999999999887655

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.25  E-value=0.022  Score=53.85  Aligned_cols=31  Identities=13%  Similarity=0.247  Sum_probs=28.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .+++|+|+|+||  -||+.+++.|.++|.+|+.
T Consensus         2 ~k~KILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (312)
T d1qyda_           2 KKSRVLIVGGTG--YIGKRIVNASISLGHPTYV   32 (312)
T ss_dssp             CCCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            456799999999  9999999999999999877

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.016  Score=57.84  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      |.|+|+||||  -||+.+|+.|.++|.+|..
T Consensus         2 K~vLITGatG--fiGs~lv~~Ll~~g~~V~~   30 (357)
T d1db3a_           2 KVALITGVTG--QDGSYLAEFLLEKGYEVHG   30 (357)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5788999999  9999999999999999987

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.00  E-value=0.021  Score=54.73  Aligned_cols=41  Identities=15%  Similarity=0.067  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ++++++|+++  -||+++|+.|+++|.+|.+  |++++.++++..
T Consensus         1 ~TAlVTGas~--GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~   43 (252)
T d1zmta1           1 STAIVTNVKH--FGGMGSALRLSEAGHTVACHDESFKQKDELEAF   43 (252)
T ss_dssp             CEEEESSTTS--TTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh
Confidence            4689999996  8999999999999999999  888888877665

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=93.96  E-value=0.044  Score=52.30  Aligned_cols=45  Identities=13%  Similarity=0.228  Sum_probs=34.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cch-hhHHHHHhhCC
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRIP  508 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~-~~~~~l~~~~~  508 (639)
                      +.+.++++|+++  -||+|+|+.|+++|.+|.+  |++ ++.++..++.+
T Consensus         4 ~gKvalVTGas~--GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g   51 (247)
T d2ew8a1           4 KDKLAVITGGAN--GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG   51 (247)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC
Confidence            346789999997  9999999999999999999  544 34444444443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=93.95  E-value=0.016  Score=49.66  Aligned_cols=41  Identities=15%  Similarity=0.223  Sum_probs=36.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhC
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI  507 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~  507 (639)
                      +++.++|..   .+|+.+|+.|.++|.+|++  .|+++.++++++.
T Consensus         1 k~~iIiG~G---~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~   43 (134)
T d2hmva1           1 KQFAVIGLG---RFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA   43 (134)
T ss_dssp             CCEEEECCS---HHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC
T ss_pred             CEEEEECCC---HHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC
Confidence            578999994   9999999999999999999  8899999887653

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=93.94  E-value=0.069  Score=47.46  Aligned_cols=66  Identities=20%  Similarity=0.286  Sum_probs=42.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCc---ccccceeeeccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~---~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ..+|.++|+ |  .||+++|..|+++|.  ++.+  +++++.+-...++..   ......+...++++ ++++++|+
T Consensus         5 ~~KI~IIGa-G--~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvi   78 (146)
T d1ez4a1           5 HQKVVLVGD-G--AVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVI   78 (146)
T ss_dssp             BCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEE
Confidence            458999996 7  999999999998874  5666  566665543332211   12222233445777 88888775

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.89  E-value=0.15  Score=45.94  Aligned_cols=67  Identities=18%  Similarity=0.276  Sum_probs=42.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHH----HHHhhCCcccccceeeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~----~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      .+.+|.++|+ |  .||+.+|..|+.+|.  ++.|  +++++.+    .|+.-.........+...++++ ++++++|+
T Consensus        18 ~~~KI~IIGa-G--~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvi   93 (159)
T d2ldxa1          18 SRCKITVVGV-G--DVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVII   93 (159)
T ss_dssp             CCCEEEEECC-S--HHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEE
Confidence            4668999997 7  999999999997776  5666  5555544    3433221211112122335776 88888775

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.80  E-value=0.1  Score=46.24  Aligned_cols=67  Identities=13%  Similarity=0.179  Sum_probs=43.1

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc---cccce-eeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE---AQHNL-VLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~---~~~~l-~~~~~~~~-~~~~vwiv  531 (639)
                      +.++|.++|| |  .||+++|..|+.+|.  ++.|  +++++.+-...++...   ...+. +...++++ ++++++|+
T Consensus         5 ~~~KI~IiGa-G--~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvi   80 (148)
T d1ldna1           5 GGARVVVIGA-G--FVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVI   80 (148)
T ss_dssp             TSCEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEE
T ss_pred             CCCeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEE
Confidence            5678999997 8  999999999997775  5666  5666654333333221   11121 22234776 88888775

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.75  E-value=0.014  Score=54.63  Aligned_cols=30  Identities=20%  Similarity=0.275  Sum_probs=28.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +++|+|+||||  -||+++++.|.++|.+|..
T Consensus         3 kkKILVtGatG--~iG~~l~~~L~~~G~~V~~   32 (307)
T d1qyca_           3 RSRILLIGATG--YIGRHVAKASLDLGHPTFL   32 (307)
T ss_dssp             CCCEEEESTTS--TTHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence            57899999999  9999999999999999987

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=93.61  E-value=0.023  Score=54.72  Aligned_cols=42  Identities=12%  Similarity=0.099  Sum_probs=34.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +-+.|+++|+++  -||+++|+.|+++|.+|.+  |+.++.+++++
T Consensus         4 ~gK~vlITGgs~--GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~   47 (254)
T d1sbya1           4 TNKNVIFVAALG--GIGLDTSRELVKRNLKNFVILDRVENPTALAE   47 (254)
T ss_dssp             TTCEEEEETTTS--HHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH
T ss_pred             CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEECCcccHHHHHH
Confidence            357899999997  9999999999999999877  66666555543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=93.40  E-value=0.036  Score=53.11  Aligned_cols=39  Identities=23%  Similarity=0.302  Sum_probs=33.3

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      -+.++++|+++  -||+++|+.|+++|.+|.+  |++|..+..
T Consensus         5 GK~alITGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~   45 (248)
T d2d1ya1           5 GKGVLVTGGAR--GIGRAIAQAFAREGALVALCDLRPEGKEVA   45 (248)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSTTHHHHH
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            46789999997  9999999999999999999  777765533

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.35  E-value=0.032  Score=54.64  Aligned_cols=50  Identities=14%  Similarity=0.270  Sum_probs=38.6

Q ss_pred             hcCcCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c----chhhHHHHHhhCC
Q 006607          457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I----CKDDYEKLKLRIP  508 (639)
Q Consensus       457 ~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~----~~~~~~~l~~~~~  508 (639)
                      +.+|...+.|+|+|+||  -||+.+++.|-++|.+|..  +    +.+..+.++....
T Consensus        10 ~~~~~~~k~iLVTG~tG--fIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~   65 (341)
T d1sb8a_          10 KELPAQPKVWLITGVAG--FIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVS   65 (341)
T ss_dssp             HHHHHSCCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSC
T ss_pred             HhCCCCCCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhh
Confidence            34566788999999999  9999999999999999987  1    3445555555433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=93.35  E-value=0.033  Score=52.63  Aligned_cols=43  Identities=14%  Similarity=0.214  Sum_probs=32.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      .+.|+++|++|+-=||++||+.|+++|.+|.+  |+++..+.+++
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~   49 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE   49 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            57899999995113889999999999999999  66554444433

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.21  E-value=0.067  Score=48.60  Aligned_cols=119  Identities=14%  Similarity=0.152  Sum_probs=67.3

Q ss_pred             hHHHHHHhcCcCCCcEEEEecccCchhhHHHHHHHHhccCcE-EEe--cchhhHHHHHh---hCCcccccceeeeccc--
Q 006607          450 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKL---RIPVEAQHNLVLSTSY--  521 (639)
Q Consensus       450 ltaa~v~~~i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~~~~~~l~~---~~~~~~~~~l~~~~~~--  521 (639)
                      ...+.--+.++-..++|++.|+-   -.|+|++.+|++.|.+ +.+  |++++.+++++   ++....... +.+..+  
T Consensus         5 f~~~l~~~~~~l~~k~vlIlGaG---Gaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~   80 (182)
T d1vi2a1           5 HIRAIKESGFDIKGKTMVLLGAG---GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCV-VTVTDLAD   80 (182)
T ss_dssp             HHHHHHHTTCCCTTCEEEEECCS---HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCE-EEEEETTC
T ss_pred             HHHHHHHcCCCcCCCEEEEECCc---HHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcc-eEeeeccc
Confidence            33444444555567899999997   4689999999988885 445  77776665543   333333222 223322  


Q ss_pred             ----cc--cceeEEEEcCcCC---------hhhhhcCCCCceeecccccCCcC------CC-CCceeecCCccc
Q 006607          522 ----AA--HKTKIWLVGDDLT---------GKEQARAPKGTIFIPYTQIPPRK------LR-KDCFYHSTPAMI  573 (639)
Q Consensus       522 ----~~--~~~~vwivg~~~~---------~~~q~~a~~G~~f~~~~~~~~~~------~R-~dc~y~~~~a~~  573 (639)
                          .+  .+++++|--..+.         +.+....+++.+++|+. ..|.+      .| .-|.++.+-.|-
T Consensus        81 ~~~~~~~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~-Y~p~~T~ll~~a~~~g~~~i~Gl~Ml  153 (182)
T d1vi2a1          81 QQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV-YNPHMTKLLQQAQQAGCKTIDGYGML  153 (182)
T ss_dssp             HHHHHHHHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC-CSSSSCHHHHHHHTTTCEEECHHHHH
T ss_pred             ccchhhhhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhh-cCccccHHHHHHHHCcCeEeccHHHH
Confidence                11  4567777322111         12333457777777777 33331      11 455666666553

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.94  E-value=0.031  Score=51.96  Aligned_cols=37  Identities=19%  Similarity=0.315  Sum_probs=31.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      .|.++++|+++  -||+|+|+.|+++|.+|.+  |++|..+
T Consensus         1 DK~alITGas~--GIG~aiA~~la~~Ga~V~i~~~~~~~~~   39 (241)
T d1uaya_           1 ERSALVTGGAS--GLGRAAALALKARGYRVVVLDLRREGED   39 (241)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHHTCEEEEEESSCCSSS
T ss_pred             CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCccccc
Confidence            36789999997  9999999999999999999  6665433

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.93  E-value=0.029  Score=52.95  Aligned_cols=44  Identities=16%  Similarity=0.330  Sum_probs=35.0

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe--cc-hhhHHHHHhhCCccc
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPVEA  511 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~-~~~~~~l~~~~~~~~  511 (639)
                      .+|+||++  -||+|+|+.|+++|.+|.+  |+ ++..+++.+++..+.
T Consensus         4 AlVTGas~--GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~   50 (266)
T d1mxha_           4 AVITGGAR--RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR   50 (266)
T ss_dssp             EEETTCSS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS
T ss_pred             EEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc
Confidence            47889997  8999999999999999999  55 445677777655443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.89  E-value=0.068  Score=42.76  Aligned_cols=54  Identities=20%  Similarity=0.278  Sum_probs=42.0

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +||+..+..+     ++..++|++.|++|  -||....+.+...|.+|..  +++|+.|.+++
T Consensus        14 lTA~~al~~~~~~~~~~~~~~vlI~gasG--gVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCcEEEEeCCC--cHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence            5665544322     34567899999999  9999999987799999986  78888887764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.88  E-value=0.082  Score=46.43  Aligned_cols=58  Identities=24%  Similarity=0.398  Sum_probs=43.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhhCCcccccceeeeccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .+|.|+++.|.+.| .++.+  |++++.++|+++.+...      .++.++ +++++++.
T Consensus         2 kI~fIG~-G--~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~------~~~~~~v~~~Div~l   63 (152)
T d1yqga2           2 NVYFLGG-G--NMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET------SATLPELHSDDVLIL   63 (152)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE------ESSCCCCCTTSEEEE
T ss_pred             EEEEEcC-c--HHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc------ccccccccccceEEE
Confidence            4778888 5  99999999988776 88888  99999999988754222      223555 67777664

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.87  E-value=0.079  Score=47.09  Aligned_cols=65  Identities=12%  Similarity=0.165  Sum_probs=39.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc-------EEEe----cchhhHHHHHhhCCc---ccccceeeec-c-ccc-cce
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI-------KVAT----ICKDDYEKLKLRIPV---EAQHNLVLST-S-YAA-HKT  526 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~-------~v~~----~~~~~~~~l~~~~~~---~~~~~l~~~~-~-~~~-~~~  526 (639)
                      -+|.++||+|  .||+++|..|++.++       .+.+    +++++.+.+..++..   ..... +... . +++ +++
T Consensus         4 ~KV~IiGA~G--~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   80 (154)
T d5mdha1           4 IRVLVTGAAG--QIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD-VIATDKEEIAFKDL   80 (154)
T ss_dssp             EEEEESSTTS--HHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE-EEEESCHHHHTTTC
T ss_pred             eEEEEECCCC--HHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccc-cccCcccccccCCc
Confidence            3799999999  999999999996554       2333    344555555433211   11111 1222 2 344 888


Q ss_pred             eEEEE
Q 006607          527 KIWLV  531 (639)
Q Consensus       527 ~vwiv  531 (639)
                      +|+|+
T Consensus        81 dvVVi   85 (154)
T d5mdha1          81 DVAIL   85 (154)
T ss_dssp             SEEEE
T ss_pred             eEEEE
Confidence            88776

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.80  E-value=0.056  Score=48.89  Aligned_cols=67  Identities=15%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee---eeccccc--cceeEEEE
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV---LSTSYAA--HKTKIWLV  531 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~---~~~~~~~--~~~~vwiv  531 (639)
                      -..++|++.|+-|   .+||++.+|.+.| ++.+  |+.++.++|.++..........   ....++.  .+.+++|.
T Consensus        16 ~~~k~vlIlGaGG---~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn   89 (177)
T d1nvta1          16 VKDKNIVIYGAGG---AARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIIN   89 (177)
T ss_dssp             CCSCEEEEECCSH---HHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEE
T ss_pred             cCCCEEEEECCcH---HHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhcc
Confidence            3567999999985   6899999998877 7777  9999999998775443222211   1223332  55677763

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.78  E-value=0.043  Score=52.04  Aligned_cols=41  Identities=22%  Similarity=0.233  Sum_probs=31.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcE-EEe--cch---hhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~-v~~--~~~---~~~~~l~~~  506 (639)
                      ..|+++|++|  -||+++|+.|.++|.+ |.+  |+.   ++.+++.++
T Consensus        10 gt~lVTGgs~--GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~   56 (259)
T d2fr1a1          10 GTVLVTGGTG--GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAE   56 (259)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHH
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHH
Confidence            4799999997  9999999999999985 665  553   444555444

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.77  E-value=0.079  Score=47.71  Aligned_cols=94  Identities=13%  Similarity=0.081  Sum_probs=61.7

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCccccccee-eecccc-c-cceeEEEE----cC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV-LSTSYA-A-HKTKIWLV----GD  533 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~-~~~~~~-~-~~~~vwiv----g~  533 (639)
                      ++.|-++|--   .+|+++|+.|.+.|.+|..  |++++.++++++-.......-. ...+.. . .+++++|.    ++
T Consensus         2 ~~nIg~IGlG---~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~   78 (176)
T d2pgda2           2 QADIALIGLA---VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQ   78 (176)
T ss_dssp             CBSEEEECCS---HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTH
T ss_pred             CCcEEEEeEh---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchH
Confidence            4678899984   9999999999999999999  9999999998873222111101 112222 2 45555442    01


Q ss_pred             c---CChhhhhcCCCCceeecccccCCcC
Q 006607          534 D---LTGKEQARAPKGTIFIPYTQIPPRK  559 (639)
Q Consensus       534 ~---~~~~~q~~a~~G~~f~~~~~~~~~~  559 (639)
                      .   +..+-...+++|+++++.+-++|.+
T Consensus        79 ~v~~v~~~l~~~~~~g~iiid~sT~~~~~  107 (176)
T d2pgda2          79 AVDNFIEKLVPLLDIGDIIIDGGNSEYRD  107 (176)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSCCCHHH
T ss_pred             HHHHHHHHHHhccccCcEEEecCcchhHH
Confidence            0   0112234678999999999887773

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.69  E-value=0.021  Score=54.48  Aligned_cols=38  Identities=26%  Similarity=0.252  Sum_probs=33.2

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      ..+.|+++|+++  -||+|+|+.|+++|.+|.+  |++++.+
T Consensus         6 ~gK~~lITGas~--GIG~aia~~la~~Ga~V~~~~r~~~~~~   45 (237)
T d1uzma1           6 VSRSVLVTGGNR--GIGLAIAQRLAADGHKVAVTHRGSGAPK   45 (237)
T ss_dssp             CCCEEEETTTTS--HHHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCcchhc
Confidence            567899999997  9999999999999999999  7666544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.60  E-value=0.04  Score=52.99  Aligned_cols=29  Identities=21%  Similarity=0.249  Sum_probs=27.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+++|+||  -||+.+++.|.++|.+|.-
T Consensus         1 k~vLItG~tG--fiG~~l~~~Ll~~g~~V~~   29 (321)
T d1rpna_           1 RSALVTGITG--QDGAYLAKLLLEKGYRVHG   29 (321)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            5899999999  9999999999999999975

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=92.56  E-value=0.084  Score=46.80  Aligned_cols=65  Identities=17%  Similarity=0.238  Sum_probs=39.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEecc----hhhHH----HHHhhCCcccccceeeeccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVATIC----KDDYE----KLKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~~~----~~~~~----~l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ++|.++||+|  .||+++|..|..++.  ++.|.+    +++.+    .|+.-.+...... +...++++ ++++++|+
T Consensus         1 sKV~IiGaaG--~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~-i~~~~~~~~~~aDiVvi   76 (142)
T d1o6za1           1 TKVSVVGAAG--TVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTR-VRQGGYEDTAGSDVVVI   76 (142)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCE-EEECCGGGGTTCSEEEE
T ss_pred             CeEEEECCCC--cHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCce-EeeCCHHHhhhcCEEEE
Confidence            4799999999  999999999996665  455522    33333    2332222221111 23335776 88888664

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.55  E-value=0.064  Score=49.47  Aligned_cols=64  Identities=16%  Similarity=0.183  Sum_probs=47.4

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh-CCc------ccccceeeec-cccc--cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV------EAQHNLVLST-SYAA--HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~-~~~------~~~~~l~~~~-~~~~--~~~~vwiv  531 (639)
                      ++|.|.|+.   ..|.|+|..|++.|.+|++  |++|..++|+++ .+.      .-..+ +.++ ++++  ++++++|+
T Consensus         8 ~KI~ViGaG---~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~-i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           8 NKAVVFGSG---AFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN-ITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             EEEEEECCS---HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT-EEEESCHHHHHTTCSCEEE
T ss_pred             ceEEEECCC---HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccc-cccchhhhhccCCCCEEEE
Confidence            469999998   8999999999999999999  999999999865 111      11223 3333 4654  67777664

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=92.47  E-value=0.11  Score=45.71  Aligned_cols=66  Identities=14%  Similarity=0.151  Sum_probs=41.0

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCc-----ccccceeeeccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~-----~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      +++|.++|+ |  .||+++|..|+++++ .+.+  .++++.+.....+..     ....+.....++++ ++++++|+
T Consensus         1 r~KI~IIGa-G--~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvi   75 (142)
T d1uxja1           1 RKKISIIGA-G--FVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVV   75 (142)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEE
Confidence            368999997 7  999999999997776 5555  555555443333221     11112112234776 88877664

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.38  E-value=0.042  Score=50.54  Aligned_cols=102  Identities=9%  Similarity=0.100  Sum_probs=60.8

Q ss_pred             cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhh-CCcccccceeeecc--ccc--cceeEEEE
Q 006607          460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLR-IPVEAQHNLVLSTS--YAA--HKTKIWLV  531 (639)
Q Consensus       460 ~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~-~~~~~~~~l~~~~~--~~~--~~~~vwiv  531 (639)
                      +-.-++|+++|...  -||+-+|..|.++|..|++   ++.+++.+-... +......++-..+.  +++  +.+||+|.
T Consensus        26 ~l~GK~vvVIGrS~--iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          26 RLYGKKCIVINRSE--IVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TTTTCEEEEECCCT--TTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECCcc--ccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            34568999999996  8999999999999999998   222222210000 11111122222221  443  56788885


Q ss_pred             cCc-----CChhhhhcCCCCceeecccccCCc---CCCCCceee
Q 006607          532 GDD-----LTGKEQARAPKGTIFIPYTQIPPR---KLRKDCFYH  567 (639)
Q Consensus       532 g~~-----~~~~~q~~a~~G~~f~~~~~~~~~---~~R~dc~y~  567 (639)
                      +-+     ++.+.   .++|++++|+. ++..   +.++-|-|+
T Consensus       104 avG~p~~~i~~d~---ik~GavvIDvG-i~~~~~~~v~~~a~~i  143 (171)
T d1edza1         104 GVPSENYKFPTEY---IKEGAVCINFA-CTKNFSDDVKEKASLY  143 (171)
T ss_dssp             CCCCTTCCBCTTT---SCTTEEEEECS-SSCCBCGGGGTTEEEE
T ss_pred             ccCCCccccChhh---cccCceEeecc-cccccccchhheeeEE
Confidence            433     45544   49999999998 4433   333334444

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.33  E-value=0.051  Score=48.34  Aligned_cols=102  Identities=15%  Similarity=0.154  Sum_probs=69.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--Ec------
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--VG------  532 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--vg------  532 (639)
                      +|-++|--   .+|+++|+.|.+.|.+|..  |++++.++++++-...       ..+.++  +++++++  |.      
T Consensus         2 kIgiIGlG---~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           2 KVGFIGLG---IMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEECCS---TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCSSHHHHH
T ss_pred             EEEEEehh---HHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEEcCCHHHHH
Confidence            47788874   9999999999999999999  8899999887752211       223333  5665544  22      


Q ss_pred             CcCC--hhhhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006607          533 DDLT--GKEQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  576 (639)
Q Consensus       533 ~~~~--~~~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  576 (639)
                      +.+.  +.-...+++|+++++.+-.+|+       +++ ++..|.+.|.+.-|.
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~  125 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEP  125 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHH
T ss_pred             HHHhCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceecccccCChh
Confidence            1121  1234467899999999988876       222 567788777765444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=92.11  E-value=0.21  Score=45.00  Aligned_cols=67  Identities=18%  Similarity=0.274  Sum_probs=42.4

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCC----cccccceeeeccccc-cceeEEEE
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIP----VEAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~----~~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ...+|.++|+ |  .||+++|..|+.+|.  ++.|  .++++.+-....+.    .......+...++++ ++++++|+
T Consensus        19 ~~~KV~IIGa-G--~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-G--QVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEE
T ss_pred             CCCeEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEE
Confidence            3569999997 7  999999999998877  5555  55565543322221    111112122334776 88988775

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.06  E-value=0.11  Score=46.09  Aligned_cols=25  Identities=16%  Similarity=0.186  Sum_probs=22.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI  490 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~  490 (639)
                      ++|.++||+|  .||+++|..|+++|.
T Consensus         1 sKv~IiGA~G--~VG~~~A~~l~~~~~   25 (144)
T d1mlda1           1 AKVAVLGASG--GIGQPLSLLLKNSPL   25 (144)
T ss_dssp             CEEEEETTTS--TTHHHHHHHHHTCTT
T ss_pred             CeEEEECCCC--hHHHHHHHHHHhCCc
Confidence            4799999999  999999999998776

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.06  E-value=0.024  Score=49.70  Aligned_cols=36  Identities=17%  Similarity=0.324  Sum_probs=30.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHH
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL  503 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l  503 (639)
                      +|.+.|+ |  .||+++|..|++.|.+|++  |++++.+.+
T Consensus         2 kI~IiGa-G--~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~   39 (167)
T d1ks9a2           2 KITVLGC-G--ALGQLWLTALCKQGHEVQGWLRVPQPYCSV   39 (167)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCEEEEECSSCCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHHCCCceEEEEcCHHHhhhh
Confidence            6899999 6  9999999999999999999  666655433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=92.02  E-value=0.052  Score=52.15  Aligned_cols=30  Identities=23%  Similarity=0.220  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +++|+|+|+||  =||+++++.|.++|..|+.
T Consensus         2 kkkIlITG~tG--fiG~~l~~~L~~~g~~vi~   31 (315)
T d1e6ua_           2 KQRVFIAGHRG--MVGSAIRRQLEQRGDVELV   31 (315)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHTTCTTEEEE
T ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999998887

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.81  E-value=0.1  Score=46.02  Aligned_cols=58  Identities=12%  Similarity=0.157  Sum_probs=43.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv  531 (639)
                      +|.++|.-   .+|+|+++.|.+.|.++.+  |++++.++++++.+...      .++.++  +++++++.
T Consensus         2 kIg~IG~G---~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~------~~~~~~~~~~~dvIil   63 (152)
T d2ahra2           2 KIGIIGVG---KMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSHQDLIDQVDLVIL   63 (152)
T ss_dssp             EEEEECCS---HHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSHHHHHHTCSEEEE
T ss_pred             EEEEEecc---HHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee------echhhhhhhccceeee
Confidence            46778876   9999999999999999999  88999999987754332      234443  56677653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=91.69  E-value=0.1  Score=47.67  Aligned_cols=25  Identities=12%  Similarity=0.186  Sum_probs=21.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccC
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMG  489 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~  489 (639)
                      .-+|.++||+|  .||+.++..|++.+
T Consensus        24 ~~kV~I~GA~G--~Ig~~l~~~La~g~   48 (175)
T d7mdha1          24 LVNIAVSGAAG--MISNHLLFKLASGE   48 (175)
T ss_dssp             CEEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred             CcEEEEECCCc--HHHHHHHHHHHcCc
Confidence            44799999999  99999999999644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=91.59  E-value=0.041  Score=44.75  Aligned_cols=29  Identities=10%  Similarity=0.090  Sum_probs=26.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .++|++.|.-   +-|.++|++|+++|.+|++
T Consensus         5 ~K~v~ViGlG---~sG~s~a~~L~~~g~~v~~   33 (93)
T d2jfga1           5 GKNVVIIGLG---LTGLSCVDFFLARGVTPRV   33 (93)
T ss_dssp             TCCEEEECCS---HHHHHHHHHHHHTTCCCEE
T ss_pred             CCEEEEEeEC---HHHHHHHHHHHHCCCEEEE
Confidence            4579999995   8899999999999999999

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.52  E-value=0.079  Score=52.21  Aligned_cols=46  Identities=20%  Similarity=0.187  Sum_probs=36.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--c---------chhhHHHHHhhCCc
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I---------CKDDYEKLKLRIPV  509 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~---------~~~~~~~l~~~~~~  509 (639)
                      +.+.++++|+++  -||+++|+.|+++|.+|.+  +         +++..+++.+++..
T Consensus         6 ~gKvalITGas~--GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~   62 (302)
T d1gz6a_           6 DGRVVLVTGAGG--GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR   62 (302)
T ss_dssp             TTCEEEETTTTS--HHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCC--HHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh
Confidence            456789999997  8999999999999999997  2         34566666666544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.44  E-value=0.18  Score=44.61  Aligned_cols=28  Identities=21%  Similarity=0.249  Sum_probs=24.3

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~  494 (639)
                      +|.++||+|  .||+++|..|..++.  ++.|
T Consensus         2 KV~IiGA~G--~VG~~~a~~l~~~~l~~el~L   31 (145)
T d1hyea1           2 KVTIIGASG--RVGSATALLLAKEPFMKDLVL   31 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHTCTTCCEEEE
T ss_pred             EEEEECCCC--hHHHHHHHHHHhCCccccccc
Confidence            589999999  999999999998884  5555

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.39  E-value=0.076  Score=51.55  Aligned_cols=30  Identities=20%  Similarity=0.297  Sum_probs=28.2

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +++|+|+|++|  -||+++++.|.++|.+|+.
T Consensus         1 kKKIlVtG~sG--fiG~~lv~~L~~~g~~V~~   30 (312)
T d2b69a1           1 RKRILITGGAG--FVGSHLTDKLMMDGHEVTV   30 (312)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            47899999999  9999999999999999987

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.34  E-value=0.12  Score=45.86  Aligned_cols=103  Identities=15%  Similarity=0.165  Sum_probs=67.9

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecccc-c-cceeEEE--EcCcCCh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA-A-HKTKIWL--VGDDLTG  537 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~-~-~~~~vwi--vg~~~~~  537 (639)
                      ++|-++|--   .+|+++|+.|.++|.+|..  |++++.+.+++.-....       .+.+ . +.+++++  +.+.-+.
T Consensus         2 ~kIg~IGlG---~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diii~~v~~~~~~   71 (162)
T d3cuma2           2 KQIAFIGLG---HMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA-------RSARDAVQGADVVISMLPASQHV   71 (162)
T ss_dssp             CEEEEECCS---TTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-------SSHHHHHTSCSEEEECCSCHHHH
T ss_pred             CEEEEEEEH---HHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc-------chhhhhccccCeeeecccchhhH
Confidence            468899875   9999999999999999999  88888888776622211       1222 2 4554433  2221111


Q ss_pred             h--------hhhcCCCCceeecccccCCc-------CCC-CCceeecCCccccCC
Q 006607          538 K--------EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIPP  576 (639)
Q Consensus       538 ~--------~q~~a~~G~~f~~~~~~~~~-------~~R-~dc~y~~~~a~~~P~  576 (639)
                      +        -.....+|.++++.+-++|+       .++ ++..|.+.|..--|.
T Consensus        72 ~~v~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~  126 (162)
T d3cuma2          72 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTA  126 (162)
T ss_dssp             HHHHHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHH
T ss_pred             HHHHhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEecccccCcc
Confidence            1        23357899999999998886       222 566677777665443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=91.32  E-value=0.081  Score=47.81  Aligned_cols=55  Identities=25%  Similarity=0.294  Sum_probs=44.1

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+..++.+     .++...|++.||+|  -||.+.++.....|.+|+-  +++|+.+.+++-
T Consensus         6 lTA~~a~~~L~~~g~~~~~~~VLV~gaaG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2           6 FTAALSVHRLEQNGLSPEKGSVLVTGATG--GVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEESTTS--HHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCEEEEeCCcc--hHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            7888777654     22334599999999  9999999988899999987  888888888665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=91.31  E-value=0.22  Score=43.92  Aligned_cols=65  Identities=15%  Similarity=0.201  Sum_probs=40.6

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHH----HHhhCCcccccceeeeccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEK----LKLRIPVEAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~----l~~~~~~~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      .+|.++|+ |  .||+++|..|+.+|.  ++.|  .++++.+-    |+.-............+++++ ++++++|+
T Consensus         2 ~Ki~IIGa-G--~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVi   75 (143)
T d1llda1           2 TKLAVIGA-G--AVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI   75 (143)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred             CEEEEECC-C--HHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEE
Confidence            46899998 8  999999999997776  4556  55665543    332211111122112334776 88888775

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.29  E-value=0.062  Score=51.91  Aligned_cols=30  Identities=17%  Similarity=0.170  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++.|+|+||||  -||+.+++.|-++|.+|..
T Consensus         1 ~k~~LVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (339)
T d1n7ha_           1 RKIALITGITG--QDGSYLTEFLLGKGYEVHG   30 (339)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCcc--HHHHHHHHHHHHCcCEEEE
Confidence            46899999999  9999999999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.23  E-value=0.2  Score=44.58  Aligned_cols=55  Identities=16%  Similarity=0.103  Sum_probs=43.1

Q ss_pred             hhHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       449 sltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      -+||+-.+...  ++..+.|++.|++|  -||.+.++.+...|.+|+.  +++++.+.+++
T Consensus        13 ~~TA~~al~~~~~~~~g~~VlV~Ga~G--~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~   71 (174)
T d1yb5a2          13 YFTAYRALIHSACVKAGESVLVHGASG--GVGLAACQIARAYGLKILGTAGTEEGQKIVLQ   71 (174)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEEETCSS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEEeccc--cccccccccccccCcccccccccccccccccc
Confidence            35676665444  34566899999998  9999999998899999987  77888877764

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=91.23  E-value=0.17  Score=45.34  Aligned_cols=55  Identities=22%  Similarity=0.122  Sum_probs=46.1

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+-.+...-  +.-+.|++.||+|  .||.+.++.....|.+|..  +++++.+.+++.
T Consensus        15 lTA~~al~~~~~v~~G~~VlV~ga~g--gvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~   73 (182)
T d1v3va2          15 LTAYFGLLEVCGVKGGETVLVSAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI   73 (182)
T ss_dssp             HHHHHHHHTTTCCCSSCEEEESSTTS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeCCC--chhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh
Confidence            68888887663  3456899999998  9999999988899999987  788888887766

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=91.11  E-value=0.22  Score=44.02  Aligned_cols=65  Identities=15%  Similarity=0.218  Sum_probs=41.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCc---ccc-cceeeeccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV---EAQ-HNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~---~~~-~~l~~~~~~~~-~~~~vwiv  531 (639)
                      ++|.++|+ |  .||+++|..|+.+|.  ++.|  .++++.+.....+..   ... ...+...++++ ++++++|+
T Consensus         2 kKI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVi   75 (146)
T d1hyha1           2 RKIGIIGL-G--NVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVIS   75 (146)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEE
T ss_pred             CeEEEECc-C--HHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEE
Confidence            68999996 7  999999999997774  5666  666665433333221   111 11123334776 88888664

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=91.05  E-value=0.14  Score=45.52  Aligned_cols=57  Identities=11%  Similarity=0.040  Sum_probs=47.1

Q ss_pred             ChhHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          448 SSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       448 nsltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +-+||+..+.+..  +..+.|++.|+.|  -+|.++++.....|.+|..  +++++.+.+++.
T Consensus        12 ~~~TA~~al~~~~~l~~g~~Vlv~ga~g--~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l   72 (179)
T d1qora2          12 KGLTVYYLLRKTYEIKPDEQFLFHAAAG--GVGLIACQWAKALGAKLIGTVGTAQKAQSALKA   72 (179)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTB--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEcccc--ccchHHHHHHHHhCCeEeecccchHHHHHHHhc
Confidence            4578888887663  3467899999998  9999999998899999988  888898888754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=91.00  E-value=0.066  Score=50.22  Aligned_cols=33  Identities=15%  Similarity=0.268  Sum_probs=29.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD  498 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~  498 (639)
                      .+|+++|+++  -||+|+|+.|.++|.+|.+  |+++
T Consensus         3 gkVlITGas~--GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           3 GKVIVYGGKG--ALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             EEEEEETTTS--HHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCch
Confidence            4799999997  9999999999999999998  5554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.00  E-value=0.17  Score=46.07  Aligned_cols=99  Identities=16%  Similarity=0.151  Sum_probs=65.7

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecc-c
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS-Y  521 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~-~  521 (639)
                      +||+-.++.+     .+....|++.||+|  -||.+..+.....|.+|..  +++++.+.+++- ..+...+   .++ .
T Consensus        14 lTA~~a~~~L~~~g~~~~g~~VLI~gaaG--GVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l-Ga~~vi~---~~~~~   87 (176)
T d1xa0a2          14 FTAALSIHRLEEHGLTPERGPVLVTGATG--GVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GAKEVLA---REDVM   87 (176)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TCSEEEE---CC---
T ss_pred             HHHHHHHHHHHHhCCCCCCCEEEEEeccc--hHHHHHHHHHHHcCCceEEecCchHHHHHHHhc-ccceeee---cchhH
Confidence            7888776654     23456799999999  9999999998899999888  777777776543 3333211   121 1


Q ss_pred             ----cc---cceeEEE--EcCcCChhhhhcCCCCceeecccc
Q 006607          522 ----AA---HKTKIWL--VGDDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       522 ----~~---~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                          ++   ...++++  +|...-++.+....+|-+++.+..
T Consensus        88 ~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~  129 (176)
T d1xa0a2          88 AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGL  129 (176)
T ss_dssp             ------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSC
T ss_pred             HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeec
Confidence                11   4456666  666666666666677777776663

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=90.95  E-value=0.067  Score=52.06  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=30.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhh
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD  499 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~  499 (639)
                      .++|+|+|+||  -||+.+++.|.++|.+|..  |++..
T Consensus         8 ~KkILVTG~tG--fIGs~lv~~Ll~~g~~V~~~~r~~~~   44 (356)
T d1rkxa_           8 GKRVFVTGHTG--FKGGWLSLWLQTMGATVKGYSLTAPT   44 (356)
T ss_dssp             TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            47899999999  9999999999999999997  55443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.60  E-value=0.2  Score=48.71  Aligned_cols=28  Identities=25%  Similarity=0.290  Sum_probs=26.5

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+++|+||  -||+.+++.|.++|.+|..
T Consensus         2 KiLItG~tG--fIG~~l~~~L~~~g~~V~~   29 (338)
T d1udca_           2 RVLVTGGSG--YIGSHTCVQLLQNGHDVII   29 (338)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            489999999  9999999999999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.60  E-value=0.18  Score=44.75  Aligned_cols=55  Identities=20%  Similarity=0.123  Sum_probs=43.8

Q ss_pred             hHHHHHHhcC--cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i--~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+..+...  .+..+.|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++.
T Consensus        11 ~TA~~al~~~~~~~~g~~VlI~ga~g--~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~   69 (183)
T d1pqwa_          11 LTAWHSLCEVGRLSPGERVLIHSATG--GVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL   69 (183)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEETTTTS--HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECCCC--Ccccccchhhccccccceeeecccccccccccc
Confidence            6777666444  34557899999997  9999999988899999887  788888888754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=90.48  E-value=0.12  Score=48.02  Aligned_cols=88  Identities=10%  Similarity=0.052  Sum_probs=58.3

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEE--------E
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWL--------V  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwi--------v  531 (639)
                      ..++|-++|.-   .||+.+|+.|..-|.+|...++..-.....+      .......++++  +++++++        -
T Consensus        48 ~gktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------~~~~~~~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          48 RGETLGIIGLG---RVGQAVALRAKAFGFNVLFYDPYLSDGVERA------LGLQRVSTLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCTTHHHH------HTCEECSSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eCceEEEeccc---cccccceeeeeccccceeeccCcccccchhh------hccccccchhhccccCCEEEEeecccccc
Confidence            45688999987   9999999999999999998222111111111      11122334554  5666644        2


Q ss_pred             cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                      -..++.+...++++|+.+|-++|   |+.+
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG~ivde~  148 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARGGLVDEK  148 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhHHHHhccCCCCeEEecCCceEEcHH
Confidence            23567778889999999999999   5554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=90.34  E-value=0.14  Score=45.12  Aligned_cols=40  Identities=25%  Similarity=0.258  Sum_probs=32.5

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~  506 (639)
                      ++|.++|. |  .+|..+|+.|.+.|.  +|..  +|++..+..++.
T Consensus         2 k~I~IIG~-G--~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~   45 (171)
T d2g5ca2           2 QNVLIVGV-G--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL   45 (171)
T ss_dssp             CEEEEESC-S--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT
T ss_pred             CEEEEEcc-C--HHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHh
Confidence            36899996 6  999999999999885  5555  788888877766

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.23  E-value=0.09  Score=49.20  Aligned_cols=28  Identities=18%  Similarity=0.302  Sum_probs=25.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      -|+++|+++  -||+|+|+.|.++|.+|.+
T Consensus         3 VvlITGas~--GIG~aiA~~la~~Ga~V~~   30 (257)
T d1fjha_           3 IIVISGCAT--GIGAATRKVLEAAGHQIVG   30 (257)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             EEEEeCCCC--HHHHHHHHHHHHCCCEEEE
Confidence            478899997  8999999999999999987

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=90.13  E-value=0.12  Score=46.99  Aligned_cols=55  Identities=20%  Similarity=0.260  Sum_probs=43.8

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+..++.+     .++..+|++.||+|  -||.+..+.....|.+|.-  +++++.+.+++.
T Consensus        14 lTA~~a~~~l~~~g~~~~~~~vlV~gasG--GVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~l   75 (177)
T d1o89a2          14 FTAMLCVMALEDAGVRPQDGEIVVTGASG--GVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (177)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCEEEESSTTS--HHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEccc--cchHHHHHHHHHcCCCeEEEecchhHHHHHHhh
Confidence            7888766543     33445899999998  9999999999999999886  888887777543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.12  E-value=0.13  Score=49.98  Aligned_cols=37  Identities=16%  Similarity=0.078  Sum_probs=27.1

Q ss_pred             EEEecccCchhhHHHHHHHHhccCcEEEe-----cchhhHHHHH
Q 006607          466 VLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLK  504 (639)
Q Consensus       466 V~~~Gatg~~kig~ava~~L~~~~~~v~~-----~~~~~~~~l~  504 (639)
                      |+++|+++  =||+|+|+.|+++|-+|.+     |+.++.+++.
T Consensus         5 vlITGass--GIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~   46 (285)
T d1jtva_           5 VLITGCSS--GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLW   46 (285)
T ss_dssp             EEESCCSS--HHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHH
T ss_pred             EEEccCCC--HHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHH
Confidence            45679996  9999999999999977543     4444444443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.90  E-value=0.24  Score=43.82  Aligned_cols=67  Identities=10%  Similarity=0.114  Sum_probs=40.0

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc---------EEEe--cchhhHHHHHhhCCccccccee---eecc--ccc-ccee
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI---------KVAT--ICKDDYEKLKLRIPVEAQHNLV---LSTS--YAA-HKTK  527 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~---------~v~~--~~~~~~~~l~~~~~~~~~~~l~---~~~~--~~~-~~~~  527 (639)
                      +|.++||+|  .||+++|..|++.++         ++..  .+.+..+.+..++... ...++   .+++  +++ ++++
T Consensus         6 KV~IiGA~G--~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ad   82 (154)
T d1y7ta1           6 RVAVTGAAG--QIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-AFPLLAGLEATDDPKVAFKDAD   82 (154)
T ss_dssp             EEEESSTTS--HHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCTTEEEEEEESCHHHHTTTCS
T ss_pred             EEEEECCCC--HHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc-ccccccccccCCchhhhccccc
Confidence            799999999  999999999997664         2222  4444555443332211 11111   2222  445 8998


Q ss_pred             EEEEcCc
Q 006607          528 IWLVGDD  534 (639)
Q Consensus       528 vwivg~~  534 (639)
                      |+|+-.+
T Consensus        83 vViitaG   89 (154)
T d1y7ta1          83 YALLVGA   89 (154)
T ss_dssp             EEEECCC
T ss_pred             EEEeecC
Confidence            8776443

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.90  E-value=0.11  Score=48.70  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=28.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      -+.|+++|++|  -||+++|+.|+++|.+|.+
T Consensus         2 gK~vlITGas~--GIG~a~a~~l~~~G~~V~~   31 (236)
T d1dhra_           2 ARRVLVYGGRG--ALGSRCVQAFRARNWWVAS   31 (236)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEECCCC--HHHHHHHHHHHHCCCEEEE
Confidence            47899999997  9999999999999999987

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.87  E-value=0.097  Score=50.77  Aligned_cols=29  Identities=24%  Similarity=0.304  Sum_probs=26.6

Q ss_pred             cEE-EEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHV-LLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V-~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++| +|+|+||  =||+.+++.|-++|.+|.-
T Consensus         1 kKI~LVTG~tG--fIG~~l~~~Ll~~g~~V~~   30 (347)
T d1t2aa_           1 RNVALITGITG--QDGSYLAEFLLEKGYEVHG   30 (347)
T ss_dssp             CCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEecCCc--HHHHHHHHHHHHCcCEEEE
Confidence            467 8999999  9999999999999999985

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=89.79  E-value=0.15  Score=44.31  Aligned_cols=31  Identities=16%  Similarity=0.243  Sum_probs=28.9

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      .-++|.++|.+|  .+|+.+|+.|.+.|.+|..
T Consensus         8 ~~~kI~iIGg~G--~mG~~la~~L~~~G~~V~~   38 (152)
T d2pv7a2           8 DIHKIVIVGGYG--KLGGLFARYLRASGYPISI   38 (152)
T ss_dssp             TCCCEEEETTTS--HHHHHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEEcCCC--HHHHHHHHHHHHcCCCcEe
Confidence            456899999998  9999999999999999999

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.64  E-value=0.15  Score=46.93  Aligned_cols=40  Identities=23%  Similarity=0.189  Sum_probs=34.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      ++|.|+|| |  -+|+.+|..+++.|.+|++  ++++.+++.++.
T Consensus         5 kkvaViGa-G--~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-G--LMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-S--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-C--HHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            68999999 5  9999999999999999999  777766655444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=89.46  E-value=0.25  Score=44.10  Aligned_cols=98  Identities=13%  Similarity=0.144  Sum_probs=62.5

Q ss_pred             hhHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCCcccccceeeecc----c
Q 006607          449 SLAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTS----Y  521 (639)
Q Consensus       449 sltaa~v~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~l~~~~~----~  521 (639)
                      -+||+-.++... +..+.|++.|++|  -||.+.++.+...|.+|..  +++++.+.+++ ++.+.-   +...+    .
T Consensus        13 ~~TA~~al~~~~~~~g~~VlI~ga~G--~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~~~---i~~~~~~~~~   86 (171)
T d1iz0a2          13 FLTAYLALKRAQARPGEKVLVQAAAG--ALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAEEA---ATYAEVPERA   86 (171)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEESSTTB--HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCSEE---EEGGGHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCEEEEEeccc--cchhhhhhhhcccccccccccccccccccccc-ccccee---eehhhhhhhh
Confidence            367777777654 3556899999998  9999999988899999887  77888887764 444331   12222    1


Q ss_pred             cc-cceeEEE--EcCcCChhhhhcCCCCceeeccc
Q 006607          522 AA-HKTKIWL--VGDDLTGKEQARAPKGTIFIPYT  553 (639)
Q Consensus       522 ~~-~~~~vwi--vg~~~~~~~q~~a~~G~~f~~~~  553 (639)
                      .+ ..+++++  +|+.+ ++-.+.+.+|-.++-+.
T Consensus        87 ~~~~g~D~v~d~~G~~~-~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2          87 KAWGGLDLVLEVRGKEV-EESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             HHTTSEEEEEECSCTTH-HHHHTTEEEEEEEEEC-
T ss_pred             hccccccccccccchhH-HHHHHHHhcCCcEEEEe
Confidence            12 4566665  66544 33344455555555553

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.30  E-value=0.38  Score=43.85  Aligned_cols=89  Identities=8%  Similarity=0.060  Sum_probs=59.9

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEecchh-hHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD-DYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~-~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      -..++|.++|.-   .||+++|+.|..-|.+|...++. .-+...++...      ....++++  ++++++++      
T Consensus        42 l~~~~vgiiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~------~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          42 LEAMHVGTVAAG---RIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL------TWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             CTTCEEEEECCS---HHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC------EECSSHHHHGGGCSEEEECSCCCT
T ss_pred             ccccceeecccc---ccchhhhhhhhccCceEEEEeeccccccccccccc------cccCCHHHHHHhccchhhcccccc
Confidence            356788999976   99999999999999999982211 11111111111      12333443  56766553      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                        -..++.++...+++|+.+|-++|   |+.+
T Consensus       113 ~T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~  144 (188)
T d2naca1         113 ETEHMINDETLKLFKRGAYIVNTARGKLCDRD  144 (188)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             cchhhhHHHHHHhCCCCCEEEecCchhhhhHH
Confidence              35678899999999999999999   5554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=89.29  E-value=0.23  Score=44.11  Aligned_cols=70  Identities=17%  Similarity=0.152  Sum_probs=44.4

Q ss_pred             CcCCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCcc----cccceeeec-ccc-c-cceeE
Q 006607          459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE----AQHNLVLST-SYA-A-HKTKI  528 (639)
Q Consensus       459 i~~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~~----~~~~l~~~~-~~~-~-~~~~v  528 (639)
                      +.+++.+|.++|+ |  .||+.+|..|+..++ ++.+  .++++.+-....+...    .....+..+ .++ + +++++
T Consensus         3 ~~~k~~KI~IIGa-G--~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adi   79 (154)
T d1pzga1           3 LVQRRKKVAMIGS-G--MIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADC   79 (154)
T ss_dssp             CCSCCCEEEEECC-S--HHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSE
T ss_pred             cccCCCcEEEECC-C--HHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCe
Confidence            4467889999998 8  999999999997776 5555  5666655444443221    111112223 344 4 78888


Q ss_pred             EEE
Q 006607          529 WLV  531 (639)
Q Consensus       529 wiv  531 (639)
                      +|+
T Consensus        80 Vvi   82 (154)
T d1pzga1          80 VIV   82 (154)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.90  E-value=0.18  Score=49.14  Aligned_cols=29  Identities=17%  Similarity=0.240  Sum_probs=27.1

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      |-|+|+||||  -||+.+++.|.++|.+|..
T Consensus         2 K~ILVTGatG--fIG~~lv~~Ll~~g~~V~~   30 (347)
T d1z45a2           2 KIVLVTGGAG--YIGSHTVVELIENGYDCVV   30 (347)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEeCCCc--HHHHHHHHHHHHCcCeEEE
Confidence            4689999999  9999999999999999987

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.72  E-value=0.29  Score=44.66  Aligned_cols=82  Identities=12%  Similarity=0.174  Sum_probs=59.8

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------c
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  532 (639)
                      .++|.++|.-   .||+.+|+.|..-|.+|...++..     .+.+.      ....++++  ++++++++        =
T Consensus        42 gk~vgIiG~G---~IG~~va~~l~~~g~~v~~~d~~~-----~~~~~------~~~~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          42 GEKVAVLGLG---EIGTRVGKILAALGAQVRGFSRTP-----KEGPW------RFTNSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TCEEEEESCS---THHHHHHHHHHHTTCEEEEECSSC-----CCSSS------CCBSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             CceEEEeccc---cccccceeeeeccccccccccccc-----cccce------eeeechhhhhhccchhhcccccccccc
Confidence            4679999987   899999999999999999933221     11111      11335665  77777663        2


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCCc
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                      ..++.+...++++|+++|..+|   |+.+
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~ivd~~  136 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAEVLDRD  136 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGGGBCHH
T ss_pred             cccccceeeeccccceEEeccccccccch
Confidence            4678899999999999999998   5544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=88.44  E-value=0.4  Score=43.58  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=56.5

Q ss_pred             HHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-cchhhHHHHHhhCCcccccceeeeccccc-
Q 006607          451 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA-  523 (639)
Q Consensus       451 taa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-  523 (639)
                      |+..|++=+     +-.-++|+++|...  -+|+-+|..|.++|-.|+. .++.+                    ++++ 
T Consensus        20 Tp~aI~~lL~~y~i~l~GK~v~VIGrS~--~VG~Pla~lL~~~gatVt~~h~~t~--------------------~l~~~   77 (166)
T d1b0aa1          20 TPRGIVTLLERYNIDTFGLNAVVIGASN--IVGRPMSMELLLAGCTTTVTHRFTK--------------------NLRHH   77 (166)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEECCCT--TTHHHHHHHHHTTTCEEEEECSSCS--------------------CHHHH
T ss_pred             hHHHHHHHHHHcCcccccceEEEEeccc--cccHHHHHHHHHhhccccccccccc--------------------hhHHH
Confidence            555555544     44678999999997  9999999999999999999 21110                    1111 


Q ss_pred             -cceeEEEEc----CcCChhhhhcCCCCceeecccccCC
Q 006607          524 -HKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIPP  557 (639)
Q Consensus       524 -~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~~  557 (639)
                       +++|++|++    ..++++..   ++|+.++|+. +.+
T Consensus        78 ~~~ADivI~a~G~p~~i~~~~v---k~g~vvIDvG-i~~  112 (166)
T d1b0aa1          78 VENADLLIVAVGKPGFIPGDWI---KEGAIVIDVG-INR  112 (166)
T ss_dssp             HHHCSEEEECSCCTTCBCTTTS---CTTCEEEECC-CEE
T ss_pred             HhhhhHhhhhccCccccccccc---CCCcEEEecC-cee
Confidence             366777743    34555544   8999999987 544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.07  E-value=0.38  Score=42.14  Aligned_cols=54  Identities=15%  Similarity=0.161  Sum_probs=40.9

Q ss_pred             hHHHHHHhcC-cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i-~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+-.++.. ++..+.|++.|+ |  -||..+++.+...|.+|..  ++++|++..++-
T Consensus        14 ~Ta~~al~~~~~~~g~~VlV~Ga-G--~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~   70 (166)
T d1llua2          14 VTVYKGLKQTNARPGQWVAISGI-G--GLGHVAVQYARAMGLHVAAIDIDDAKLELARKL   70 (166)
T ss_dssp             HHHHHHHHHHTCCTTCEEEEECC-S--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCEEEEeec-c--ccHHHHHHHHHHcCCccceecchhhHHHhhhcc
Confidence            4565555544 345667888887 7  8999999988899999988  888888876543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.04  E-value=0.26  Score=46.96  Aligned_cols=33  Identities=24%  Similarity=0.310  Sum_probs=28.5

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +.+.++++||.|.+-||+|||+.|+++|-+|.+
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi   39 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILV   39 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEE
Confidence            567899999985224999999999999999999

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=88.01  E-value=0.46  Score=42.32  Aligned_cols=56  Identities=13%  Similarity=0.103  Sum_probs=43.3

Q ss_pred             hHHHHHHhcCc--CCCcEEEEecccCchhhHHHHHHHHhccCc-EEEe--cchhhHHHHHhhCCc
Q 006607          450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV  509 (639)
Q Consensus       450 ltaa~v~~~i~--~~~~~V~~~Gatg~~kig~ava~~L~~~~~-~v~~--~~~~~~~~l~~~~~~  509 (639)
                      +||+-.++...  +.-+.|++.|| |  -||..+++.+...|. +|..  ++++|++..+ +++.
T Consensus        14 ~ta~~al~~~~~~~~G~~VlV~Ga-G--~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa   74 (182)
T d1vj0a2          14 ATAYHAFDEYPESFAGKTVVIQGA-G--PLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGA   74 (182)
T ss_dssp             HHHHHHHHTCSSCCBTCEEEEECC-S--HHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHhCCCCCCEEEEECC-C--ccchhheecccccccccccccccccccccccc-cccc
Confidence            57777776664  34578999997 7  899999999999997 6766  8888888764 4443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.76  E-value=0.38  Score=43.31  Aligned_cols=39  Identities=15%  Similarity=0.156  Sum_probs=31.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--c--chhhHHHHHhh
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLR  506 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~--~~~~~~~l~~~  506 (639)
                      +|.+.|+.   ..|.|+|..|++.|.+|.+  |  +++..+.+++.
T Consensus         2 kI~ViGaG---~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~   44 (180)
T d1txga2           2 IVSILGAG---AMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAG   44 (180)
T ss_dssp             EEEEESCC---HHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTT
T ss_pred             EEEEECCC---HHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhh
Confidence            58899996   9999999999999999999  4  34456666554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.54  E-value=0.2  Score=45.30  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=26.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCc--EEEe
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGI--KVAT  494 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~  494 (639)
                      .++|+++||||  -||+.+++.|.++|.  +|..
T Consensus         2 ~KkIlItGatG--~iG~~lv~~L~~~~~~~~v~~   33 (212)
T d2a35a1           2 PKRVLLAGATG--LTGEHLLDRILSEPTLAKVIA   33 (212)
T ss_dssp             CCEEEEECTTS--HHHHHHHHHHHHCTTCCEEEC
T ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEE
Confidence            36899999999  999999999998886  6666

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=87.49  E-value=0.35  Score=42.36  Aligned_cols=65  Identities=12%  Similarity=0.156  Sum_probs=37.8

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc--ccccee-eeccccc-cceeEEEE
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE--AQHNLV-LSTSYAA-HKTKIWLV  531 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~--~~~~l~-~~~~~~~-~~~~vwiv  531 (639)
                      ++|.++|+ |  +||+++|..|..++.  ++.|  +++++.+....++...  ...+.. ...++++ ++++++|+
T Consensus         2 ~KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   74 (142)
T d1y6ja1           2 SKVAIIGA-G--FVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVV   74 (142)
T ss_dssp             CCEEEECC-S--HHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEE
T ss_pred             CeEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEE
Confidence            57899998 8  999999999997766  5666  5666544333332221  111111 2224666 88887664

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.18  E-value=0.27  Score=44.42  Aligned_cols=61  Identities=10%  Similarity=0.095  Sum_probs=47.5

Q ss_pred             hhHHHHHHhcC---cCC-CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCccc
Q 006607          449 SLAAAVVVNSL---PKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEA  511 (639)
Q Consensus       449 sltaa~v~~~i---~~~-~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~  511 (639)
                      .+||+..+.++   .++ .+.|++.||+|  -||+++++.....|.+++.   +++|+.++++++++.+.
T Consensus        13 glTA~~~l~~~~~~~~G~~etVLI~gaaG--gVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2          13 GLTSLIGVQEKGHISAGSNQTMVVSGAAG--ACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             HHHHHHHHHHHSCCCTTSCCEEEESSTTS--TTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEEECCCc--hhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            68999888665   333 47899999998  9999999987678876443   67788888888877655

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.10  E-value=0.44  Score=42.20  Aligned_cols=66  Identities=20%  Similarity=0.226  Sum_probs=42.1

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe---cchhhHHHHHhhCCccc---ccce-e-eeccccc-cceeEEEE
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEA---QHNL-V-LSTSYAA-HKTKIWLV  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~---~~~~~~~~l~~~~~~~~---~~~l-~-~~~~~~~-~~~~vwiv  531 (639)
                      +++|.++|+ |  .||+++|..|.++++..+.   +++++.+.....+....   ..+. + ....+++ ++++++|+
T Consensus         3 ~~KI~IIGa-G--~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvi   77 (150)
T d1t2da1           3 KAKIVLVGS-G--MIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIV   77 (150)
T ss_dssp             CCEEEEECC-S--HHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEE
T ss_pred             CCeEEEECC-C--HHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEE
Confidence            368999997 7  9999999988888876655   55666655544433321   1121 1 1123666 88888765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.65  E-value=0.56  Score=42.62  Aligned_cols=85  Identities=13%  Similarity=0.118  Sum_probs=57.6

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEecch--hhHHHHHhhCCcccccceeeeccccc--cceeEEEE------
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICK--DDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV------  531 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv------  531 (639)
                      ..++|.++|.-   .||+++|+.|..-|.+|...++  ++-+. ++.       . ++..++++  +++|++++      
T Consensus        43 ~~k~vgiiG~G---~IG~~va~~~~~fg~~v~~~d~~~~~~~~-~~~-------~-~~~~~l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          43 FGKTVGVVGLG---RIGQLVAQRIAAFGAYVVAYDPYVSPARA-AQL-------G-IELLSLDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             TTCEEEEECCS---HHHHHHHHHHHTTTCEEEEECTTSCHHHH-HHH-------T-CEECCHHHHHHHCSEEEECCCCST
T ss_pred             cceeeeecccc---chhHHHHHHhhhccceEEeecCCCChhHH-hhc-------C-ceeccHHHHHhhCCEEEEcCCCCc
Confidence            35677888854   9999999999999999998222  11111 111       0 22334554  56766552      


Q ss_pred             --cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 --GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 --g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                        -..++.+++.++++|+++|-++|   |+.+
T Consensus       111 ~T~~lin~~~l~~mk~~a~lIN~sRG~iVde~  142 (184)
T d1ygya1         111 ETAGLIDKEALAKTKPGVIIVNAARGGLVDEA  142 (184)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             hhhhhhhHHHHhhhCCCceEEEecchhhhhhH
Confidence              23678899999999999999999   5544

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=86.33  E-value=0.55  Score=40.76  Aligned_cols=64  Identities=14%  Similarity=0.193  Sum_probs=38.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCcc-----cccceeeeccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVE-----AQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~-----~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      +|.++|| |  .||+++|..|..++.  ++.+  .++++.+.....+...     ....+...+.+++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvi   75 (142)
T d1guza1           2 KITVIGA-G--NVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVII   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEE
Confidence            5899997 8  999999999997764  6666  5666555333222111     1111111223666 88877664

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.11  E-value=0.23  Score=49.14  Aligned_cols=29  Identities=21%  Similarity=0.169  Sum_probs=27.3

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|+||  -||+++++.|.++|.+|..
T Consensus         2 ~kILVTGatG--fiG~~lv~~Ll~~g~~V~~   30 (393)
T d1i24a_           2 SRVMVIGGDG--YCGWATALHLSKKNYEVCI   30 (393)
T ss_dssp             CEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            5799999999  9999999999999999985

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.10  E-value=0.25  Score=45.92  Aligned_cols=28  Identities=14%  Similarity=0.331  Sum_probs=26.7

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +|+++||||  -||+.+++.|.++|.+|..
T Consensus         3 KIlItGasG--fiG~~l~~~L~~~g~~Vi~   30 (281)
T d1vl0a_           3 KILITGANG--QLGREIQKQLKGKNVEVIP   30 (281)
T ss_dssp             EEEEESTTS--HHHHHHHHHHTTSSEEEEE
T ss_pred             EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence            589999999  9999999999999999988

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=86.03  E-value=0.49  Score=41.00  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=29.9

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHH
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE  501 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~  501 (639)
                      +.++++||..   .+|+.+++.|.++|.++++  .++|+..
T Consensus         3 knHiII~G~g---~~g~~l~~~L~~~~~~v~vId~d~~~~~   40 (153)
T d1id1a_           3 KDHFIVCGHS---ILAINTILQLNQRGQNVTVISNLPEDDI   40 (153)
T ss_dssp             CSCEEEECCS---HHHHHHHHHHHHTTCCEEEEECCCHHHH
T ss_pred             CCEEEEECCC---HHHHHHHHHHHHcCCCEEEEeccchhHH
Confidence            4579999996   9999999999999999888  5555443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.98  E-value=0.81  Score=41.52  Aligned_cols=81  Identities=20%  Similarity=0.210  Sum_probs=55.4

Q ss_pred             hHHHHHHhcC-----cCCCcEEEEecccCchhhHHHHHHHHhccCcEEEe-c--chhhHHHHHhhCCcccccceeeeccc
Q 006607          450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-I--CKDDYEKLKLRIPVEAQHNLVLSTSY  521 (639)
Q Consensus       450 ltaa~v~~~i-----~~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~-~--~~~~~~~l~~~~~~~~~~~l~~~~~~  521 (639)
                      =|+..|++=+     +-.-++|.++|...  -||+-+|..|.++|-.|++ .  .++..+.+                  
T Consensus        21 cTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~------------------   80 (170)
T d1a4ia1          21 CTPKGCLELIKETGVPIAGRHAVVVGRSK--IVGAPMHDLLLWNNATVTTCHSKTAHLDEEV------------------   80 (170)
T ss_dssp             HHHHHHHHHHHTTTCCCTTCEEEEECCCT--TTHHHHHHHHHHTTCEEEEECTTCSSHHHHH------------------
T ss_pred             ChHHHHHHHHHHhCcccccceEEEEecCC--ccchHHHHHHHhccCceEEEecccccHHHHH------------------
Confidence            3666666544     34678999999997  8999999999999999999 1  11111111                  


Q ss_pred             cccceeEEEEc----CcCChhhhhcCCCCceeecccccC
Q 006607          522 AAHKTKIWLVG----DDLTGKEQARAPKGTIFIPYTQIP  556 (639)
Q Consensus       522 ~~~~~~vwivg----~~~~~~~q~~a~~G~~f~~~~~~~  556 (639)
                        +++++.|++    +.++++.   .++|+.++|+. ++
T Consensus        81 --~~aDivi~a~G~~~~i~~~~---vk~g~iviDvg-i~  113 (170)
T d1a4ia1          81 --NKGDILVVATGQPEMVKGEW---IKPGAIVIDCG-IN  113 (170)
T ss_dssp             --TTCSEEEECCCCTTCBCGGG---SCTTCEEEECC-CB
T ss_pred             --hhccchhhcccccccccccc---ccCCCeEeccC-cc
Confidence              355666622    3355544   48999999987 44

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.90  E-value=0.59  Score=41.11  Aligned_cols=28  Identities=25%  Similarity=0.341  Sum_probs=22.7

Q ss_pred             EEEEecccCchhhHHHHHHHHh-cc--CcEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLC-QM--GIKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~-~~--~~~v~~  494 (639)
                      +|.++|++|  .||+++|..|+ +.  +-++.|
T Consensus         2 KV~IiGaaG--~VG~~~a~~l~~~~~~~~el~L   32 (145)
T d2cmda1           2 KVAVLGAAG--GIGQALALLLKTQLPSGSELSL   32 (145)
T ss_dssp             EEEEETTTS--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred             EEEEEcCCC--hHHHHHHHHHHhCCCCCcEEEE
Confidence            689999998  99999999987 43  355666

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.85  E-value=0.99  Score=39.86  Aligned_cols=106  Identities=16%  Similarity=0.097  Sum_probs=65.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhhCC-cccccceeeecc---c-cc-cce-eEEE-EcC-
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP-VEAQHNLVLSTS---Y-AA-HKT-KIWL-VGD-  533 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~~~-~~~~~~l~~~~~---~-~~-~~~-~vwi-vg~-  533 (639)
                      +|-++|--   .+|.++|+.|.+.|.+|..  |++++.++++++-. .....+.....+   + .. .++ .+.+ +.+ 
T Consensus         3 kIGvIGlG---~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (178)
T d1pgja2           3 DVGVVGLG---VMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG   79 (178)
T ss_dssp             SEEEECCS---HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred             EEEEEeeh---HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCc
Confidence            46677765   9999999999999999999  99999999988833 222223221211   1 11 222 2222 211 


Q ss_pred             -cCC---hhhhhcCCCCceeecccccCCcCC--------CCCceeecCCccc
Q 006607          534 -DLT---GKEQARAPKGTIFIPYTQIPPRKL--------RKDCFYHSTPAMI  573 (639)
Q Consensus       534 -~~~---~~~q~~a~~G~~f~~~~~~~~~~~--------R~dc~y~~~~a~~  573 (639)
                       .++   .+......+|+++++.+..+|+..        .++..|.+.|...
T Consensus        80 ~~~~~~~~~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g  131 (178)
T d1pgja2          80 AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG  131 (178)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEES
T ss_pred             chhhhhhhhhhhhccccceecccCccchhHHHHHHHHHhhcceeEecccccC
Confidence             010   234446889999999998776622        2556666665543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=85.84  E-value=0.67  Score=40.58  Aligned_cols=55  Identities=11%  Similarity=0.108  Sum_probs=41.5

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccC-cEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~-~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+-.++... +..+.|++.|++|  -+|..+++.+...| .+|..  ++++|.+.+++-
T Consensus        14 ~Ta~~al~~~~~~~g~~vlV~G~~G--~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~   72 (170)
T d1jvba2          14 ITTYRAVRKASLDPTKTLLVVGAGG--GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA   72 (170)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEETTTS--HHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEEEeccc--cceeeeeecccccccccccccccchhhHHHHHHc
Confidence            45665666654 3456899999998  99999999998777 57766  788888877653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=84.58  E-value=0.27  Score=47.53  Aligned_cols=28  Identities=21%  Similarity=0.243  Sum_probs=24.9

Q ss_pred             EEEEecccCchhhHHHHHHHHhccC-cEEEe
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMG-IKVAT  494 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~-~~v~~  494 (639)
                      +|+++|+||  =||+++++.|+++| .+|..
T Consensus         2 KILITG~tG--fiG~~l~~~Ll~~g~~~V~~   30 (342)
T d2blla1           2 RVLILGVNG--FIGNHLTERLLREDHYEVYG   30 (342)
T ss_dssp             EEEEETCSS--HHHHHHHHHHHHSTTCEEEE
T ss_pred             EEEEECCCc--HHHHHHHHHHHHCCCCEEEE
Confidence            589999999  99999999999888 56665

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.39  E-value=0.76  Score=40.40  Aligned_cols=54  Identities=11%  Similarity=-0.055  Sum_probs=40.7

Q ss_pred             hHHHHHHhcCc-CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          450 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       450 ltaa~v~~~i~-~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +||+-+++.-. +..+.|++.|+ |  -||...++++...|.+|..  ++++|++..++-
T Consensus        14 ~Ta~~al~~~~~~~g~~vlI~Ga-G--~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l   70 (168)
T d1piwa2          14 LTVYSPLVRNGCGPGKKVGIVGL-G--GIGSMGTLISKAMGAETYVISRSSRKREDAMKM   70 (168)
T ss_dssp             HHHHHHHHHTTCSTTCEEEEECC-S--HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCCEEEEECC-C--CcchhHHHHhhhccccccccccchhHHHHhhcc
Confidence            46665555432 34567889997 7  8999999988899999987  888888876553

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.19  E-value=0.38  Score=46.92  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=28.7

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ...+|+|+|++|  =||+.+++.|.++|.+|+.
T Consensus        14 ~nMKILVTGgsG--fIGs~lv~~L~~~g~~V~~   44 (363)
T d2c5aa1          14 ENLKISITGAGG--FIASHIARRLKHEGHYVIA   44 (363)
T ss_dssp             SCCEEEEETTTS--HHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEECCCC--HHHHHHHHHHHHCcCEEEE
Confidence            456799999999  9999999999999999987

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=83.68  E-value=0.67  Score=42.77  Aligned_cols=85  Identities=12%  Similarity=0.109  Sum_probs=58.5

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------c
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  532 (639)
                      .++|.++|--   .||+.+|+.|.--|.+|...++.+-.....+  .      ....++++  ++++++++        -
T Consensus        43 gk~vgIiG~G---~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--~------~~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          43 DQVVGVVGTG---HIGQVFMQIMEGFGAKVITYDIFRNPELEKK--G------YYVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--T------CBCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCeEEEeccc---ccchhHHHhHhhhcccccccCcccccccccc--e------eeeccccccccccccccccCCcccccc
Confidence            5679999987   9999999999999999988332211111111  0      11334543  56666552        3


Q ss_pred             CcCChhhhhcCCCCceeecccc---cCCc
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                      ..++.++.+.+|+|+++|-++|   ++.+
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG~ivde~  140 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRGPLVDTD  140 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGGBCHH
T ss_pred             ccccHHHHhhhCCccEEEecCchhhhhhH
Confidence            4678889999999999999998   5554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=83.55  E-value=0.45  Score=43.17  Aligned_cols=41  Identities=12%  Similarity=0.103  Sum_probs=33.8

Q ss_pred             CCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHh
Q 006607          462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL  505 (639)
Q Consensus       462 ~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~  505 (639)
                      +-++|.++|+.   -+|+.+|..+++.|.+|.+  ++++.+++..+
T Consensus         3 ~I~~vaViGaG---~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           3 DVKQAAVLGAG---IMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             CCSSEEEECCH---HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            45689999994   9999999999999999999  77776665433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.38  E-value=0.33  Score=47.07  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=27.0

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      ++|+|+|+||  -||+++++.|.++|.+|+.
T Consensus         3 kKILITG~tG--fIGs~lv~~Ll~~g~~V~~   31 (346)
T d1ek6a_           3 EKVLVTGGAG--YIGSHTVLELLEAGYLPVV   31 (346)
T ss_dssp             SEEEEETTTS--HHHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEECCCc--HHHHHHHHHHHHCcCEEEE
Confidence            6899999999  9999999999999999865

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.13  E-value=0.91  Score=39.38  Aligned_cols=64  Identities=17%  Similarity=0.237  Sum_probs=38.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCccc--ccce-eeeccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPVEA--QHNL-VLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~~~--~~~l-~~~~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .||+++|..|+.++.  ++.|  .++++.+....++....  .... +...++++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvi   73 (140)
T d1a5za1           2 KIGIVGL-G--RVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIV   73 (140)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEE
Confidence            5889997 7  999999999996664  4555  56666654333322211  1111 12224666 88877664

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=82.24  E-value=0.83  Score=42.02  Aligned_cols=80  Identities=13%  Similarity=0.063  Sum_probs=55.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecchhhHHHHHhhCCcccccceeeeccccc--cceeEEEE--------c
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV--------G  532 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv--------g  532 (639)
                      .++|-++|.-   .||+++|+.|.--|.+|...++..-        .+.... ....++++  +.++++++        -
T Consensus        45 ~ktvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~--------~~~~~~-~~~~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          45 QQTVGVMGTG---HIGQVAIKLFKGFGAKVIAYDPYPM--------KGDHPD-FDYVSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GSEEEEECCS---HHHHHHHHHHHHTTCEEEEECSSCC--------SSCCTT-CEECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             ceeeeeeecc---cccccccccccccceeeeccCCccc--------hhhhcc-hhHHHHHHHHHhcccceeeeccccccc
Confidence            4678899987   9999999999999999998332110        011111 12234544  56666552        2


Q ss_pred             CcCChhhhhcCCCCceeecccc
Q 006607          533 DDLTGKEQARAPKGTIFIPYTQ  554 (639)
Q Consensus       533 ~~~~~~~q~~a~~G~~f~~~~~  554 (639)
                      ..++.+...++++|+.+|-++|
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccHHHhhccCCceEEEeccc
Confidence            3578889999999999999998

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.69  E-value=0.89  Score=39.68  Aligned_cols=64  Identities=16%  Similarity=0.133  Sum_probs=38.8

Q ss_pred             EEEEecccCchhhHHHHHHHHhccCc--EEEe--cchhhHHHHHhhCCc-----ccccceeeeccccc-cceeEEEE
Q 006607          465 HVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV-----EAQHNLVLSTSYAA-HKTKIWLV  531 (639)
Q Consensus       465 ~V~~~Gatg~~kig~ava~~L~~~~~--~v~~--~~~~~~~~l~~~~~~-----~~~~~l~~~~~~~~-~~~~vwiv  531 (639)
                      +|.++|+ |  .||+++|..|..+|.  ++.|  .++++.+-....+..     .........+++++ ++++++|+
T Consensus         2 KI~IIGa-G--~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvi   75 (142)
T d1ojua1           2 KLGFVGA-G--RVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVV   75 (142)
T ss_dssp             EEEEECC-S--HHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEE
T ss_pred             EEEEECc-C--HHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEE
Confidence            5889997 8  999999999986654  3444  566665432222211     11122122335777 88888664

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=81.55  E-value=0.81  Score=41.90  Aligned_cols=86  Identities=8%  Similarity=0.096  Sum_probs=57.6

Q ss_pred             CcEEEEecccCchhhHHHHHHHHhccCcEEEecch--hhHHHHHhhCCcccccceeeeccccc--cceeEEEE-------
Q 006607          463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICK--DDYEKLKLRIPVEAQHNLVLSTSYAA--HKTKIWLV-------  531 (639)
Q Consensus       463 ~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~~~~--~~~~~l~~~~~~~~~~~l~~~~~~~~--~~~~vwiv-------  531 (639)
                      .++|-++|.-   .||+++|+.|.--|.+|...+.  ..-+.-...       ..+...++++  +.++++++       
T Consensus        47 g~tvgIiG~G---~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~ll~~sD~v~l~~plt~~  116 (191)
T d1gdha1          47 NKTLGIYGFG---SIGQALAKRAQGFDMDIDYFDTHRASSSDEASY-------QATFHDSLDSLLSVSQFFSLNAPSTPE  116 (191)
T ss_dssp             TCEEEEECCS---HHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHHHHCSEEEECCCCCTT
T ss_pred             ccceEEeecc---cchHHHHHHHHhhccccccccccccccchhhcc-------cccccCCHHHHHhhCCeEEecCCCCch
Confidence            5678888887   9999999999999999998222  111111111       0011223443  56666553       


Q ss_pred             -cCcCChhhhhcCCCCceeecccc---cCCc
Q 006607          532 -GDDLTGKEQARAPKGTIFIPYTQ---IPPR  558 (639)
Q Consensus       532 -g~~~~~~~q~~a~~G~~f~~~~~---~~~~  558 (639)
                       -..|+.++...+++|+.+|-++|   |+.+
T Consensus       117 T~~li~~~~l~~mk~~a~lIN~sRG~ivde~  147 (191)
T d1gdha1         117 TRYFFNKATIKSLPQGAIVVNTARGDLVDNE  147 (191)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             HhheecHHHhhCcCCccEEEecCCccchhhH
Confidence             24677899999999999999999   6644

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.25  E-value=0.85  Score=44.59  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=25.2

Q ss_pred             cEEEEecccCchhhHHHHHHHHhccCcEEEe
Q 006607          464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT  494 (639)
Q Consensus       464 ~~V~~~Gatg~~kig~ava~~L~~~~~~v~~  494 (639)
                      +-.+++|+.+.+-||+|||+.|++.|.+|.+
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i   33 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIF   33 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEE
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEE
Confidence            4567789653125999999999999999999

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=80.12  E-value=1.3  Score=38.62  Aligned_cols=43  Identities=16%  Similarity=0.051  Sum_probs=35.8

Q ss_pred             CCCcEEEEecccCchhhHHHHHHHHhccCcEEEe--cchhhHHHHHhh
Q 006607          461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR  506 (639)
Q Consensus       461 ~~~~~V~~~Gatg~~kig~ava~~L~~~~~~v~~--~~~~~~~~l~~~  506 (639)
                      +..+.|++.| .|  -||..+++.+...|.+|..  ++++|++..++-
T Consensus        25 ~~g~~vlV~G-~G--~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~   69 (170)
T d1e3ja2          25 QLGTTVLVIG-AG--PIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC   69 (170)
T ss_dssp             CTTCEEEEEC-CS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             CCCCEEEEEc-cc--ccchhhHhhHhhhcccccccchHHHHHHHHHHc
Confidence            3456788888 57  8999999999999999888  889998877664