Citrus Sinensis ID: 006709
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 634 | 2.2.26 [Sep-21-2011] | |||||||
| Q9CMJ6 | 440 | Amino-acid acetyltransfer | yes | no | 0.670 | 0.965 | 0.291 | 1e-54 | |
| P59099 | 442 | Amino-acid acetyltransfer | yes | no | 0.687 | 0.986 | 0.307 | 9e-54 | |
| P22567 | 432 | Amino-acid acetyltransfer | yes | no | 0.668 | 0.981 | 0.307 | 2e-51 | |
| Q02EG0 | 432 | Amino-acid acetyltransfer | yes | no | 0.668 | 0.981 | 0.307 | 2e-51 | |
| B7V594 | 432 | Amino-acid acetyltransfer | yes | no | 0.668 | 0.981 | 0.307 | 2e-51 | |
| A6VDY0 | 432 | Amino-acid acetyltransfer | yes | no | 0.668 | 0.981 | 0.307 | 2e-51 | |
| B0KP70 | 432 | Amino-acid acetyltransfer | yes | no | 0.664 | 0.974 | 0.300 | 5e-50 | |
| Q4ZZU5 | 432 | Amino-acid acetyltransfer | yes | no | 0.667 | 0.979 | 0.294 | 5e-50 | |
| P61919 | 432 | Amino-acid acetyltransfer | N/A | no | 0.667 | 0.979 | 0.294 | 5e-50 | |
| P0A100 | 432 | Amino-acid acetyltransfer | yes | no | 0.664 | 0.974 | 0.300 | 8e-50 |
| >sp|Q9CMJ6|ARGA_PASMU Amino-acid acetyltransferase OS=Pasteurella multocida (strain Pm70) GN=argA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/545 (29%), Positives = 249/545 (45%), Gaps = 120/545 (22%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V WFR++ PY+ HRG TFV+++ G+ ++ P I+ DI+ LH LGI+ VLV G
Sbjct: 5 ELVHWFRQSTPYVNMHRGKTFVIMLDGDTIACPNFVNIINDISLLHSLGIKLVLVFGARY 64
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI++LL + E+ Y RITD SL +A G + I ++LS P
Sbjct: 65 QINELLQQHQIESVYHKNIRITDLTSLELVKQAVGKLNYDIASRLSLRLP---------- 114
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
H + V SGNF+ A+ G VD G + Y
Sbjct: 115 ---HSPLIDVVSGNFVLAQPIG----VDDG---------------------------IDY 140
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ--R 319
SG++ NT + + D+ ++ GPI A S+ +
Sbjct: 141 QLSGKIRRINTESIQQ------QLDRDAIVLIGPI---------------APSVTGESFN 179
Query: 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGL 379
+ EIA+ + E + F + I +N +T S+ L
Sbjct: 180 LPFEEIASQLAIKLKAEKLIGFSATQGI----LDENNQTISD-----------------L 218
Query: 380 WSSEQGFAIGGQERLSRLNGYLSE----LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
+ + +L + N Y S L AA CR G++R HL+ G LL ELF
Sbjct: 219 LPQDAELYLA---KLIQQNQYHSSQARFLQAAIEACRFGIKRSHLISYEEDGSLLQELFT 275
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER 495
RDG+GT ++ + E R A V+D+ + ++I+PL + G LV+R+ E+L ++ + +++R
Sbjct: 276 RDGVGTQLSMEHSETIRLATVSDIPALLELIRPLEQQGILVKRSREQLEMEINQYTIIDR 335
Query: 496 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555
+G IIACAAL + EK E+A + V P+ R +GD LL
Sbjct: 336 DGVIIACAALNCYADEKMAEMACVAVHPDYRNSSRGDILL-------------------- 375
Query: 556 FPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 615
+ I+K+A LG++ LF+LTTRT WF+ RGF+ I +P+++R+ N R SK
Sbjct: 376 -----EAIQKRAKQLGIEKLFVLTTRTVHWFQERGFQLAEIADLPDKKRQHYNYQRRSKI 430
Query: 616 YMKKL 620
++ L
Sbjct: 431 LIQAL 435
|
Pasteurella multocida (strain Pm70) (taxid: 272843) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P59099|ARGA_BUCAP Amino-acid acetyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 239/540 (44%), Gaps = 104/540 (19%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V+ FR + PY+ AHRG FV+++SGE + I+ DI LH LGIR ++V G+
Sbjct: 7 ELVQGFRHSVPYINAHRGKKFVIMLSGEAIKYGNFSGIINDIGLLHSLGIRLIVVYGSCP 66
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QI+ L E+ + Y R+TD SL +AAG +++ I A+LS + N G
Sbjct: 67 QINANLKEKNIKITYHKYIRVTDLLSLEQVKQAAGRLQLDITARLSMS--LSNTPLQG-- 122
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
++V SGNF+ A+ G VD G + Y
Sbjct: 123 -----ANINVVSGNFIIAQPLG----VDDG---------------------------IDY 146
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVK 321
SG + + + A C L A LI + + ES +L
Sbjct: 147 CHSGRIRRID--KKAINCQLENGAIVLIGPVAVSVTGESFNL-----------------T 187
Query: 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWS 381
EIA + E + F S V SQ GKT SE N + G G +
Sbjct: 188 SEEIATQVSIKLKAEKMIGFC---SKQGVIDSQ-GKTISELLPNNIQNEIKKLEGKGDYI 243
Query: 382 SEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGT 441
S + L + C+ GV R HL+ G LL ELF RDG+GT
Sbjct: 244 SST----------------IRFLRGSIKACKSGVNRSHLISYHKNGALLQELFSRDGIGT 287
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
+ + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F ++ER+ IA
Sbjct: 288 QMVMESAEKIRQANINDIGGILELIRPLEKKGILVRRSREQLEMEVDKFTIIERDNLTIA 347
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRD 561
CAAL+PFFKEK GE+A + V P+ R +GD LL
Sbjct: 348 CAALYPFFKEKIGEMACVAVHPDYRNSSRGDLLL-------------------------Q 382
Query: 562 YIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 621
++ A L L +F+LTT++ WF+ RGF +E++PE ++K N R SK M L
Sbjct: 383 TMKLNAKKLNLKKIFVLTTQSIHWFQERGFILVDVEILPESKKKMYNYQRCSKILMIDLF 442
|
Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P22567|ARGA_PSEAE Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=argA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 252/543 (46%), Gaps = 119/543 (21%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
P + GE+A + V+PE R G+GD+LL
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELL---------------------- 372
Query: 558 FLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 617
+ IE++A LGL LF+LTTRTA WF+ RGF+ S+E +P R N RNS+ +
Sbjct: 373 ---ERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFE 429
Query: 618 KKL 620
K L
Sbjct: 430 KSL 432
|
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q02EG0|ARGA_PSEAB Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 252/543 (46%), Gaps = 119/543 (21%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
P + GE+A + V+PE R G+GD+LL
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELL---------------------- 372
Query: 558 FLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 617
+ IE++A LGL LF+LTTRTA WF+ RGF+ S+E +P R N RNS+ +
Sbjct: 373 ---ERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFE 429
Query: 618 KKL 620
K L
Sbjct: 430 KSL 432
|
Pseudomonas aeruginosa (strain UCBPP-PA14) (taxid: 208963) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B7V594|ARGA_PSEA8 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 252/543 (46%), Gaps = 119/543 (21%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
P + GE+A + V+PE R G+GD+LL
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELL---------------------- 372
Query: 558 FLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 617
+ IE++A LGL LF+LTTRTA WF+ RGF+ S+E +P R N RNS+ +
Sbjct: 373 ---ERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFE 429
Query: 618 KKL 620
K L
Sbjct: 430 KSL 432
|
Pseudomonas aeruginosa (strain LESB58) (taxid: 557722) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A6VDY0|ARGA_PSEA7 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 252/543 (46%), Gaps = 119/543 (21%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS L
Sbjct: 121 ---------LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + Q
Sbjct: 172 GYSPTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S A + A A+ C V +++G SE T GNG
Sbjct: 231 RLGNS-YQAELLDAAAQ---ACRAGVKRSHIVSYTEDGALLSELFTRT---------GNG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-D 437
+++ F +L A G++ +GG L+EL + +
Sbjct: 278 TLVAQEQF---------------EQLREA------GIE-------DVGG--LIELIRPLE 307
Query: 438 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 497
G +V +++++ +E ++V R E L+ A + Y
Sbjct: 308 EQGILVRRS----------------REVLEREIEQFSIVER--EGLIIACAALY------ 343
Query: 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
P + GE+A + V+PE R G+GD+LL
Sbjct: 344 ---------PIADSEAGELACLAVNPEYRHGGRGDELL---------------------- 372
Query: 558 FLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 617
+ IE++A LGL LF+LTTRTA WF+ RGF+ S+E +P R N RNS+ +
Sbjct: 373 ---ERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQRNSQVFE 429
Query: 618 KKL 620
K L
Sbjct: 430 KSL 432
|
Pseudomonas aeruginosa (strain PA7) (taxid: 381754) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B0KP70|ARGA_PSEPG Amino-acid acetyltransferase OS=Pseudomonas putida (strain GB-1) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 244/546 (44%), Gaps = 125/546 (22%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGKLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREASIEDVGGLLELISPLEEQGILVRRS--------------------- 316
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
+++++ +E ++V R E ++ A + Y + +
Sbjct: 317 ---------------------------REVLEREIEQFSVVER--EGMIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
E +AC A V+PE R G+GD+LL
Sbjct: 348 SEAGELACLA----------------VNPEYRHGGRGDELL------------------- 372
Query: 555 GFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 614
+ IE +A +GL+ LF+LTTRTA WF+ RGF +E +P R N RNSK
Sbjct: 373 ------ERIESRARQMGLNTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYNYQRNSK 426
Query: 615 YYMKKL 620
+ K L
Sbjct: 427 IFEKAL 432
|
Pseudomonas putida (strain GB-1) (taxid: 76869) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q4ZZU5|ARGA_PSEU2 Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 253/546 (46%), Gaps = 123/546 (22%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY-VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNG 376
+ + ANY + + C G V ++NG +E
Sbjct: 231 R------LGANYQAELLDAAAEACRGGVARSHIVSYAENGALLTE--------------- 269
Query: 377 NGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL-LLELFK 435
L++ + G + QE+ EL A + +GG++ L+ +
Sbjct: 270 --LFTRDGGGTLVAQEQF--------ELVREAAI------------EDVGGLMDLITPLE 307
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
G+ + ++ E ++T S +++ E L+ A + Y + +
Sbjct: 308 EQGILVRRSREVLE----REITQFSVVER----------------EGLIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
E +AC A V+PE R G+GD+LL
Sbjct: 348 SESGELACLA----------------VNPEYRHGGRGDELL------------------- 372
Query: 555 GFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 614
+ IE +A +LG+ LF+LTTRTA WF+ RGF S++ +P R N RNSK
Sbjct: 373 ------ERIENRARALGIKTLFVLTTRTAHWFRERGFEPSSVDRLPSARASLYNYQRNSK 426
Query: 615 YYMKKL 620
+ K +
Sbjct: 427 IFEKAI 432
|
Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P61919|ARGA_PSESY Amino-acid acetyltransferase OS=Pseudomonas syringae pv. syringae GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 253/546 (46%), Gaps = 123/546 (22%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
++V W R A PY+ AHR TFVV++ G+ V+ P I+ D+ LH LG+R VLV G+
Sbjct: 3 EYVNWLRHASPYINAHRDCTFVVMLPGDGVAHPNFGNIVHDLVLLHSLGVRLVLVHGSRP 62
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI+ L++RG +Y RITD+E+L ++A G +R+ IEA+LS P+ R
Sbjct: 63 QIESRLAQRGITPRYHRDLRITDTETLECVIDAVGQLRISIEARLSMDMAASPMQGSR-- 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGN + A+ GV++GVDY TGEV++VD + LD +V+LS
Sbjct: 121 ----------LRVTSGNVVTARPIGVLEGVDYQHTGEVRRVDRKGINRLLDERHIVLLSP 170
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIR 317
LGYS +GE+ N +VAT A+ + ADKL+ + +LDE G L+R L Q+ + ++
Sbjct: 171 LGYSPTGEIFNLACEDVATRAAIDLAADKLLLFGAETGLLDEQGRLVRELRPQQVPAHLQ 230
Query: 318 QRVKQSEIAANY-VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNG 376
+ + ANY + + C G V ++NG +E
Sbjct: 231 R------LGANYQAELLDAAAEACRGGVARSHIVSYAENGALLTE--------------- 269
Query: 377 NGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL-LLELFK 435
L++ + G + QE+ EL A + +GG++ L+ +
Sbjct: 270 --LFTRDGGGTLVAQEQF--------ELVREAAI------------EDVGGLMDLITPLE 307
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
G+ + ++ E ++T S +++ E L+ A + Y + +
Sbjct: 308 EQGILVRRSREVLE----REITQFSVVER----------------EGLIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
E +AC A V+PE R G+GD+LL
Sbjct: 348 SESGELACLA----------------VNPEYRHGGRGDELL------------------- 372
Query: 555 GFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 614
+ IE +A +LG+ LF+LTTRTA WF+ RGF S++ +P R N RNSK
Sbjct: 373 ------ERIENRARALGIKTLFVLTTRTAHWFRERGFEPSSVDRLPSARASLYNYQRNSK 426
Query: 615 YYMKKL 620
+ K +
Sbjct: 427 IFEKAI 432
|
Pseudomonas syringae pv. syringae (taxid: 321) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A100|ARGA_PSEPU Amino-acid acetyltransferase OS=Pseudomonas putida GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 243/546 (44%), Gaps = 125/546 (22%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ AHR TFVV++ G+ V P I+ D+ LH LG+R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+ L++RG Y RITD+ +L ++A G +R+ IEA+LS P+ R
Sbjct: 64 IESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR--- 120
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ VASGN + A+ GV++GVDY TGEV++VD + LD +V+LS L
Sbjct: 121 ---------LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPL 171
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
GYS +GE+ N +VAT A+ + ADKL+ P +LD G L+R L Q+ + Q
Sbjct: 172 GYSPTGEIFNLACEDVATRAAIELGADKLLLFGAEPGLLDADGRLVRELRPQQVAPHL-Q 230
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R+ S+ + A AE C G V +++G +E F G G G
Sbjct: 231 RLG-SDYQGELLDAAAE---ACKGGVARSHIVSYAEDGALLTE----LFTRG-----GGG 277
Query: 379 LWSSEQGFAIGGQERLSRLNGYL---SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFK 435
S++ F + + + + G L S L + RR
Sbjct: 278 TLVSQEQFEVVREATIEDVGGLLELISPLEEQGILVRRS--------------------- 316
Query: 436 RDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY-VVE 494
+++++ +E ++V R E ++ A + Y + +
Sbjct: 317 ---------------------------REVLEREIEQFSVVER--EGMIIACAALYPIAD 347
Query: 495 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
E +AC A V+PE R G+GD+LL
Sbjct: 348 SEAGELACLA----------------VNPEYRHGGRGDELL------------------- 372
Query: 555 GFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 614
+ IE +A +GL LF+LTTRTA WF+ RGF +E +P R N RNSK
Sbjct: 373 ------ERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYNYQRNSK 426
Query: 615 YYMKKL 620
+ K L
Sbjct: 427 IFEKPL 432
|
Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 634 | ||||||
| 224095037 | 560 | predicted protein [Populus trichocarpa] | 0.867 | 0.982 | 0.783 | 0.0 | |
| 356565491 | 565 | PREDICTED: amino-acid acetyltransferase- | 0.864 | 0.969 | 0.752 | 0.0 | |
| 356540624 | 607 | PREDICTED: amino-acid acetyltransferase- | 0.927 | 0.968 | 0.707 | 0.0 | |
| 356514348 | 617 | PREDICTED: LOW QUALITY PROTEIN: amino-ac | 0.864 | 0.888 | 0.728 | 0.0 | |
| 255568615 | 705 | N-acetyltransferase, putative [Ricinus c | 0.837 | 0.753 | 0.730 | 0.0 | |
| 356496999 | 605 | PREDICTED: amino-acid acetyltransferase- | 0.828 | 0.867 | 0.756 | 0.0 | |
| 297821519 | 609 | hypothetical protein ARALYDRAFT_481154 [ | 0.862 | 0.898 | 0.715 | 0.0 | |
| 297798106 | 611 | hypothetical protein ARALYDRAFT_490852 [ | 0.943 | 0.978 | 0.677 | 0.0 | |
| 42573209 | 613 | N-acetyl-l-glutamate synthase 2 [Arabido | 0.936 | 0.969 | 0.673 | 0.0 | |
| 30681866 | 609 | amino-acid N-acetyltransferase [Arabidop | 0.862 | 0.898 | 0.712 | 0.0 |
| >gi|224095037|ref|XP_002310336.1| predicted protein [Populus trichocarpa] gi|222853239|gb|EEE90786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/581 (78%), Positives = 500/581 (86%), Gaps = 31/581 (5%)
Query: 53 KERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ + S+ KVF EA G++EE YN VED+QFVKWFREAWPYLWAHRG TFVVIISGE VS
Sbjct: 10 RTNSTSRRKVFGEAESGSIEEGYNSVEDKQFVKWFREAWPYLWAHRGSTFVVIISGETVS 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP+LD ILK FLHHLGI+FVLVPGTHVQI+ LL+ERGHE K++G+YRITDSE+LAA+M
Sbjct: 70 SPFLDSILK-ATFLHHLGIKFVLVPGTHVQINNLLAERGHEPKHVGQYRITDSEALAASM 128
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IRMMIEAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVVDGVD+GA
Sbjct: 129 EAAGKIRMMIEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVDGVDFGA 188
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVDVTRMRERLDGGC+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLIC+I
Sbjct: 189 TGEVKKVDVTRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVI 248
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFLTL+EAD LIR+R KQSEIAA+YVKAV +ED+T H+DSIG + S
Sbjct: 249 DGPILDESGHLIRFLTLEEADMLIRKRAKQSEIAAHYVKAVGDEDLTFLEHNDSIGILAS 308
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
S NGK S R ATF NGVGFDNGNG QGFAIGG+E SRLNGYLSELAAAAFVC+
Sbjct: 309 SLNGKALSGRHSATFQNGVGFDNGNG-----QGFAIGGEELQSRLNGYLSELAAAAFVCK 363
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTDL+GI+QIIQPL ES
Sbjct: 364 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVTDLAGIRQIIQPLEES 423
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LVRRTDEELLKAL ++ VVEREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGD
Sbjct: 424 GTLVRRTDEELLKALYAYVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGD 483
Query: 533 KLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 592
KLL D+IE++A+SLGL+ LFLLTTRTADWF RGF
Sbjct: 484 KLL-------------------------DFIERRASSLGLETLFLLTTRTADWFNRRGFS 518
Query: 593 ECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAF 633
ECSI++IPEERRK+INLSRNSKYY KKLLPDTSGI V+RAF
Sbjct: 519 ECSIQLIPEERRKKINLSRNSKYYTKKLLPDTSGISVNRAF 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565491|ref|XP_003550973.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/581 (75%), Positives = 485/581 (83%), Gaps = 33/581 (5%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+++ ++D+QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 10 TTCKRRNVFSEEFNGSVAEEESFSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 69
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 70 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAM 129
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232
EAAG IR+MIEAKLSPGP I NIRRHGD+SR HEVGVSVASGNFLAAKR+GVV G+D+G+
Sbjct: 130 EAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGS 189
Query: 233 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 292
TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVLNCN YEVATACALA+ ADKLICI
Sbjct: 190 TGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICIT 249
Query: 293 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 352
DGPILDESGHLIRFL LQEAD LIR++V++SE AANYVKAVAEE + + G+V+S
Sbjct: 250 DGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFN--GAVHS 307
Query: 353 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412
+NGK FSE +TF+NGVGFDNGNGL S + GFAIGGQE LSR NGYLSELAAAAFVCR
Sbjct: 308 PRNGKPFSEYHNSTFHNGVGFDNGNGL-SGKHGFAIGGQESLSRTNGYLSELAAAAFVCR 366
Query: 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVES 472
GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD SGIKQ+IQPL ES
Sbjct: 367 GGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEES 426
Query: 473 GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 532
G LV+RTDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI VSP+CRGQGQGD
Sbjct: 427 GILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGD 486
Query: 533 KLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 592
KLL DYIEKKA+S+G +MLFLLTTRTADWF RGF
Sbjct: 487 KLL-------------------------DYIEKKASSIGFEMLFLLTTRTADWFVRRGFS 521
Query: 593 ECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAF 633
ECSI+ IPE++RK INLSR SKYYMKKLLP+ SGI V F
Sbjct: 522 ECSIDYIPEKKRKTINLSRKSKYYMKKLLPNKSGITVSSRF 562
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540624|ref|XP_003538787.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/625 (70%), Positives = 501/625 (80%), Gaps = 37/625 (5%)
Query: 7 SVSASATKTQLLFSSRVSNSLKPAQNLGFQLQ-GQILKGLCHHSIKNKERNLSKCKVFSE 65
+ S + + L+SS S+ L P NL F G ++ + + N+++
Sbjct: 11 NTSGTLSDFNKLYSSSHSHHL-PKPNLQFNSSWGPEVRPVTAAHLGNRKK--------LN 61
Query: 66 AMGGNVEETYN-PVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIA 124
A+ + E +Y+ +ED+QFV+ FREAWPYLWA+RG TFVVIISGEIVS P+LD ILKDIA
Sbjct: 62 ALSEDGESSYHGSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDVILKDIA 121
Query: 125 FLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEA 184
FL+HLGIRFVLVPGTHVQIDKLL+ERG + Y+GRYRITD ESL AAMEAAGGIR+MIEA
Sbjct: 122 FLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAMEAAGGIRLMIEA 181
Query: 185 KLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRM 244
KLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDVTRM
Sbjct: 182 KLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVTRM 241
Query: 245 RERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLI 304
RERLDGGC+V+L+NLGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLI
Sbjct: 242 RERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLI 301
Query: 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364
RFL LQEAD LIR+R KQS+ AANYVKAV EE ++ G+V S G F+E
Sbjct: 302 RFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSPPIG-CFTEWHN 360
Query: 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 424
ATF+NGVGF+NGNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGT
Sbjct: 361 ATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGT 420
Query: 425 IGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL 484
I GVLLLELFKRDGMGTMVASDLYEGTRTA+V D+SGIKQ+I PL SG LV+RTDEELL
Sbjct: 421 ISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASGILVKRTDEELL 480
Query: 485 KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLS 544
K LDSF VVEREG IIACAA+FP F+EKCGEVA I VSP+CRGQGQGDKLL
Sbjct: 481 KTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDKLL--------- 531
Query: 545 ETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 604
DY+EKKA+SLG +MLFLLTTRTADWF RGF ECSI+ IPE++R
Sbjct: 532 ----------------DYMEKKASSLGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKR 575
Query: 605 KRINLSRNSKYYMKKLLPDTSGIIV 629
+ INLSRNSKYYMKKLLP+ SGI V
Sbjct: 576 RMINLSRNSKYYMKKLLPNISGITV 600
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356514348|ref|XP_003525868.1| PREDICTED: LOW QUALITY PROTEIN: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/594 (72%), Positives = 479/594 (80%), Gaps = 46/594 (7%)
Query: 58 SKCK---VFSEAMGGNV--EETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVS 112
+ CK VFSE G+V EE+YN ++++QFV+WFRE WPYLWAHRG TFVVIISGEIV+
Sbjct: 49 TTCKGRNVFSEEFNGSVAEEESYNSMDNKQFVRWFRETWPYLWAHRGATFVVIISGEIVT 108
Query: 113 SPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
SP LDPILKDIAFLHHLGIRFVLVPGTHVQID LL ERG + KY+G YRITD ESLAAAM
Sbjct: 109 SPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLLERGRQPKYVGPYRITDDESLAAAM 168
Query: 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK------------ 220
EAAG IR+MIEAKLSPGP I N RRHG +SR HEVGVSVASGNF +
Sbjct: 169 EAAGRIRLMIEAKLSPGPSIYNSRRHGGNSRLHEVGVSVASGNFSFFQDGNDQVSGARVP 228
Query: 221 -RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATAC 279
R+GVV GVD+G+TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVL+CNTYEVATAC
Sbjct: 229 WRRGVVKGVDFGSTGEVKKVDISRMRERLDGDCIVILSNLGYSSSGEVLDCNTYEVATAC 288
Query: 280 ALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDIT 339
ALA+ ADKLICI DGPILDESGHLIRFLTLQEAD LIR+R++QSE ANYVKAVAEE
Sbjct: 289 ALAVRADKLICITDGPILDESGHLIRFLTLQEADMLIRKRLEQSETTANYVKAVAEESFK 348
Query: 340 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399
+ + G+V+SSQNGK FSE +TF+NGVGFDNGNGL S EQGFAIGGQE L R NG
Sbjct: 349 SLKNFN--GAVHSSQNGKPFSECHNSTFHNGVGFDNGNGL-SEEQGFAIGGQESLCRTNG 405
Query: 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 459
YLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD
Sbjct: 406 YLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDF 465
Query: 460 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519
SGIK++IQP ESG LV+ TDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI
Sbjct: 466 SGIKKLIQPFEESGILVKXTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAI 525
Query: 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT 579
VSP+CRGQGQGDKLL DY+EKKA+SLG +MLFLLT
Sbjct: 526 AVSPDCRGQGQGDKLL-------------------------DYLEKKASSLGFEMLFLLT 560
Query: 580 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAF 633
TRTADWF RGF ECS + IPE++RK INLSR SKYYMKKLLP+ SGI V F
Sbjct: 561 TRTADWFVRRGFSECSFDYIPEKKRKTINLSRKSKYYMKKLLPNKSGITVSSRF 614
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568615|ref|XP_002525281.1| N-acetyltransferase, putative [Ricinus communis] gi|223535439|gb|EEF37109.1| N-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/575 (73%), Positives = 476/575 (82%), Gaps = 44/575 (7%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
+D ++V+ RE PY+ HR TFVV++SGE+V SP+LD +L+DIAFLHHLGIRFVLVPG
Sbjct: 68 DDRKYVEVLREVQPYILLHRRSTFVVVLSGEVVDSPFLDNLLQDIAFLHHLGIRFVLVPG 127
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQID LL+ERGHEA+Y+G YRITD+E+L+A+MEAAG IRM++EAKLSPGP ICNIRRH
Sbjct: 128 THVQIDNLLAERGHEAQYVGPYRITDTEALSASMEAAGKIRMLMEAKLSPGPSICNIRRH 187
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GDSSRWH+VGVSVASGNFLAAKR+GVV+GVD+GATGEVKKVDVTRMRERLD C+V+LSN
Sbjct: 188 GDSSRWHDVGVSVASGNFLAAKRRGVVEGVDFGATGEVKKVDVTRMRERLDANCIVLLSN 247
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLICIIDGPILDESGHLIR+L ++EAD+LIR+
Sbjct: 248 LGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRYLAIEEADALIRK 307
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTF---SERRIATFNNGVGFDN 375
R KQSEIAANYVKAV +ED T HSDS+ + SSQNGK S +++ NG +
Sbjct: 308 RAKQSEIAANYVKAVGKEDFTSIEHSDSVRVISSSQNGKPINGDSVNVMSSSQNGKPVNG 367
Query: 376 GNG----------------LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 419
+G LWS EQGFAIGG ER SRLNGYLSELAAA FVC+ GVQRVH
Sbjct: 368 RHGATFHFQNGVGFGNGNGLWSGEQGFAIGGHERQSRLNGYLSELAAATFVCKGGVQRVH 427
Query: 420 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT 479
LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A++TDLSGI+QIIQPL +SG LVRRT
Sbjct: 428 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARMTDLSGIRQIIQPLEDSGVLVRRT 487
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
DEELLKALDSF V+EREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLL
Sbjct: 488 DEELLKALDSFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLL---- 543
Query: 540 WPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMI 599
D+IEKKA+SLGL+MLFLLTTRTADWFK RGF ECSIEMI
Sbjct: 544 ---------------------DFIEKKASSLGLEMLFLLTTRTADWFKRRGFSECSIEMI 582
Query: 600 PEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAFR 634
P++RRK+INLSRNSKYYMKKLLP+TSGI ++R +
Sbjct: 583 PQKRRKKINLSRNSKYYMKKLLPNTSGITINRQLQ 617
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496999|ref|XP_003517352.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/551 (75%), Positives = 466/551 (84%), Gaps = 26/551 (4%)
Query: 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPG 138
ED +FVK RE+ PY+ HRG FV++IS E+V+SPY +PILKDIAFL+HLGIRFVLVPG
Sbjct: 74 EDHEFVKALRESQPYVSVHRGRLFVLLISAELVASPYFNPILKDIAFLNHLGIRFVLVPG 133
Query: 139 THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRH 198
THVQIDKLL+ERG + KY+GRYRITD ESL AAMEAAGGIR+MIEAKLSPGP ICNIRRH
Sbjct: 134 THVQIDKLLNERGCQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRH 193
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
GD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G+TGEVKKVDV+RMRERLDGGC+VIL+N
Sbjct: 194 GDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTN 253
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
LGYSSSGEVLNCNTYEVATACALAI ADKLIC+IDGPILDESG LIRFL LQEAD LIR+
Sbjct: 254 LGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDESGRLIRFLPLQEADMLIRK 313
Query: 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 378
R +QSE AANYVKAV EE +++ G+V S G+ F+E ATF+NGVGF++GNG
Sbjct: 314 RAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVKSPPIGR-FTEWHNATFHNGVGFESGNG 372
Query: 379 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDG 438
L S EQGFAIGGQERLSR+NGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELFKRDG
Sbjct: 373 LGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDG 432
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQ 498
MGTMVASDLYEGTRTA V D+SGIKQ+IQPL SG LV+RTDEELLK LDSF VVEREG
Sbjct: 433 MGTMVASDLYEGTRTAGVKDISGIKQLIQPLEASGILVKRTDEELLKTLDSFIVVEREGH 492
Query: 499 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF 558
IIACAALFP F+EKCGEVA I VSP+CRGQGQGDKLL
Sbjct: 493 IIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLL----------------------- 529
Query: 559 LRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 618
DY+EKKA+SLGL+MLFLLTTRTADWF RGF ECSI+ +PE++R+ INLSRNSKYYMK
Sbjct: 530 --DYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYLPEKKRRMINLSRNSKYYMK 587
Query: 619 KLLPDTSGIIV 629
KLLP+ SGI V
Sbjct: 588 KLLPNISGITV 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297821519|ref|XP_002878642.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] gi|297324481|gb|EFH54901.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/580 (71%), Positives = 467/580 (80%), Gaps = 33/580 (5%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNMFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPIL
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPIL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKHTLTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR AKV DL+GI+QII PL ESGA
Sbjct: 412 VNRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTREAKVEDLAGIRQIITPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 594
L DYIEKKA++ GL+MLFLLTTRTADWF RGF+EC
Sbjct: 532 L-------------------------DYIEKKASAFGLEMLFLLTTRTADWFVRRGFQEC 566
Query: 595 SIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAFR 634
IEMIPE RR+RINLSR SKYYMKKLLPD SGI V R F+
Sbjct: 567 PIEMIPEARRERINLSRRSKYYMKKLLPDRSGISVVRTFQ 606
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297798106|ref|XP_002866937.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] gi|297312773|gb|EFH43196.1| hypothetical protein ARALYDRAFT_490852 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/630 (67%), Positives = 488/630 (77%), Gaps = 32/630 (5%)
Query: 8 VSASATKTQLLFSSRVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKCKVFSEAM 67
V S++ + F R S + P+ +L + C +KC +F A+
Sbjct: 7 VGTSSSSCYVPFQFRQSKTFFPSFRPKTKLNPIQFRFNCPWFKPVSSVTAAKCNMFDYAV 66
Query: 68 --GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAF 125
GG+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ DPILKDIAF
Sbjct: 67 SAGGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDPILKDIAF 125
Query: 126 LHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAK 185
LHHLGIRFVLVPGT QID+LLSERG EA Y+GRYR+TD+ SL AA EAAG I +M+EAK
Sbjct: 126 LHHLGIRFVLVPGTQEQIDELLSERGREATYVGRYRVTDAASLQAAKEAAGAISVMLEAK 185
Query: 186 LSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMR 245
LSPGP ICNIRRHGD +R H++GV V +GNF AAKR+GVVDGVD+GATGEVKK+DV R+
Sbjct: 186 LSPGPSICNIRRHGDRNRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKKIDVDRIC 245
Query: 246 ERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIR 305
ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILDESGHLIR
Sbjct: 246 ERLDGGSIVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILDESGHLIR 305
Query: 306 FLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGS-VYSSQNGKTF---SE 361
FLTLQEAD L+R R +QS+IAANYVKAV + +T ++ S + S QNG+ +
Sbjct: 306 FLTLQEADMLVRTRAQQSDIAANYVKAVGDGSMTYPEPPNNTSSKITSPQNGRAAFWGNG 365
Query: 362 RRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLL 421
F NGVGFDNGNGLWS EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GV+RVHLL
Sbjct: 366 NHTPVFQNGVGFDNGNGLWSGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVKRVHLL 425
Query: 422 DGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481
DGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL GI+ II+PL ESG LVRRTDE
Sbjct: 426 DGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLEGIRHIIKPLEESGILVRRTDE 485
Query: 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWP 541
ELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQGQGDKLL
Sbjct: 486 ELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQGQGDKLL------ 539
Query: 542 LLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 601
DYIEKKA+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE
Sbjct: 540 -------------------DYIEKKASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPE 580
Query: 602 ERRKRINLSRNSKYYMKKLLPDTSGIIVDR 631
RR+RINLSR SKYY KKLLPD SGI V R
Sbjct: 581 SRRQRINLSRKSKYYTKKLLPDRSGISVLR 610
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42573209|ref|NP_974701.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] gi|209414522|gb|ACI46501.1| At4g37670 [Arabidopsis thaliana] gi|332661422|gb|AEE86822.1| N-acetyl-l-glutamate synthase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/638 (67%), Positives = 496/638 (77%), Gaps = 44/638 (6%)
Query: 2 ATTHHSVSASATKTQLLFSS-RVSNSLKPAQNLGFQLQGQILKGLCHHSIKNKERNLSKC 60
+T+ + V +++ FSS + N L P Q F+ K + SI +KC
Sbjct: 11 STSSYYVPYHFRQSKSNFSSFKPKNKLNPTQ---FRFNCSWFKPV--SSI-----TAAKC 60
Query: 61 KVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP 118
+F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++ D
Sbjct: 61 NMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSSCDA 119
Query: 119 ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178
ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAAG I
Sbjct: 120 ILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAAGAI 179
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGEVKK
Sbjct: 180 SVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGEVKK 239
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD 298
+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGPILD
Sbjct: 240 IDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGPILD 299
Query: 299 ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI-GSVYSSQNGK 357
ESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + ++ G++ S+QNG+
Sbjct: 300 ESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQNGR 359
Query: 358 TFS----ERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413
S F NGVGFDNGNGLW EQGFAIGG+ERLSRLNGYLSELAAAAFVCR
Sbjct: 360 AVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFVCRG 419
Query: 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 473
GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL ESG
Sbjct: 420 GVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLEESG 479
Query: 474 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533
LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQGDK
Sbjct: 480 ILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQGDK 539
Query: 534 LLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 593
LL DYIEKKA+SLGL+ LFLLTTRTADWF RGF+E
Sbjct: 540 LL-------------------------DYIEKKASSLGLEKLFLLTTRTADWFVRRGFQE 574
Query: 594 CSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDR 631
CSIE+IPE RR+RINLSRNSKYYMKKL+PD SGI V R
Sbjct: 575 CSIEIIPESRRQRINLSRNSKYYMKKLIPDRSGISVMR 612
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30681866|ref|NP_179875.2| amino-acid N-acetyltransferase [Arabidopsis thaliana] gi|28393691|gb|AAO42258.1| putative amino acid acetyltransferase [Arabidopsis thaliana] gi|29824347|gb|AAP04134.1| putative amino acid acetyltransferase [Arabidopsis thaliana] gi|330252278|gb|AEC07372.1| amino-acid N-acetyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/580 (71%), Positives = 468/580 (80%), Gaps = 33/580 (5%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNIFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 594
L DYIEKKA++LGL+MLFLLTTRTADWF RGF+EC
Sbjct: 532 L-------------------------DYIEKKASALGLEMLFLLTTRTADWFVRRGFQEC 566
Query: 595 SIEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAFR 634
IEMIPE RR+RINLSR SKYYMKKLLPD SGI V R F+
Sbjct: 567 PIEMIPEARRERINLSRRSKYYMKKLLPDRSGISVVRTFQ 606
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 634 | ||||||
| TAIR|locus:2120130 | 613 | NAGS2 "N-acetyl-l-glutamate sy | 0.752 | 0.778 | 0.717 | 8.4e-210 | |
| TAIR|locus:2059165 | 609 | NAGS1 "N-acetyl-l-glutamate sy | 0.746 | 0.776 | 0.713 | 1.2e-208 | |
| UNIPROTKB|P22567 | 432 | argA "Amino-acid acetyltransfe | 0.381 | 0.560 | 0.381 | 1.8e-81 | |
| TIGR_CMR|CPS_0465 | 436 | CPS_0465 "amino-acid N-acetylt | 0.364 | 0.529 | 0.394 | 1.9e-77 | |
| UNIPROTKB|P0A6C5 | 443 | argA [Escherichia coli K-12 (t | 0.378 | 0.541 | 0.329 | 2.5e-73 | |
| TIGR_CMR|SO_4245 | 445 | SO_4245 "amino-acid acetyltran | 0.372 | 0.530 | 0.353 | 2e-68 | |
| UNIPROTKB|Q9KPQ0 | 445 | argA "Amino-acid acetyltransfe | 0.362 | 0.516 | 0.359 | 2.5e-66 | |
| TIGR_CMR|VC_2316 | 445 | VC_2316 "N-acetylglutamate syn | 0.362 | 0.516 | 0.359 | 2.5e-66 | |
| TIGR_CMR|CHY_2263 | 294 | CHY_2263 "acetylglutamate kina | 0.347 | 0.748 | 0.270 | 1.5e-18 | |
| TIGR_CMR|GSU_0150 | 292 | GSU_0150 "acetylglutamate kina | 0.340 | 0.739 | 0.277 | 5.4e-15 |
| TAIR|locus:2120130 NAGS2 "N-acetyl-l-glutamate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1750 (621.1 bits), Expect = 8.4e-210, Sum P(2) = 8.4e-210
Identities = 348/485 (71%), Positives = 400/485 (82%)
Query: 58 SKCKVFSEAM--GGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY 115
+KC +F A+ G+VE + PV+D+QFV+WFREAWPYLWAHRG TFVVIISGEI++
Sbjct: 58 AKCNMFDYAVTAAGDVEAEH-PVDDKQFVRWFREAWPYLWAHRGCTFVVIISGEIIAGSS 116
Query: 116 LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175
D ILKDIAFLHHLGIRFVLVPGT QID+LL+ERG EA Y+GRYR+TD+ SL AA EAA
Sbjct: 117 CDAILKDIAFLHHLGIRFVLVPGTQEQIDQLLAERGREATYVGRYRVTDAASLQAAKEAA 176
Query: 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGE 235
G I +M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GATGE
Sbjct: 177 GAISVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGATGE 236
Query: 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295
VKK+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+DGP
Sbjct: 237 VKKIDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIMDGP 296
Query: 296 ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC-FGHSDSIGSVYSSQ 354
ILDESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++ S+Q
Sbjct: 297 ILDESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNITSAQ 356
Query: 355 NGKTFS----ERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410
NG+ S LW EQGFAIGG+ERLSRLNGYLSELAAAAFV
Sbjct: 357 NGRAVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAAAFV 416
Query: 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470
CR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+PL
Sbjct: 417 CRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIKPLE 476
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 530
ESG LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRGQGQ
Sbjct: 477 ESGILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRGQGQ 536
Query: 531 GDKLL 535
GDKLL
Sbjct: 537 GDKLL 541
|
|
| TAIR|locus:2059165 NAGS1 "N-acetyl-l-glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1735 (615.8 bits), Expect = 1.2e-208, Sum P(2) = 1.2e-208
Identities = 343/481 (71%), Positives = 392/481 (81%)
Query: 58 SKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLD 117
+KC +F A G N V D+QFV+WFREAWPYLWAHR TFVV ISG+++ PY D
Sbjct: 57 AKCNIFDYAETGE-----NLVGDKQFVRWFREAWPYLWAHRSCTFVVTISGDVLDGPYCD 111
Query: 118 PILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177
+LKDIAFLHHLGI+FVLVPGT VQID+LL+ERG E Y+GRYR+TDS SL AA EAAG
Sbjct: 112 LVLKDIAFLHHLGIKFVLVPGTQVQIDQLLAERGREPTYVGRYRVTDSASLQAAKEAAGA 171
Query: 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237
I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GATG VK
Sbjct: 172 ISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGATGLVK 231
Query: 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL 297
K+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+DGP+L
Sbjct: 232 KIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIMDGPVL 291
Query: 298 DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQN-- 355
DE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + ++ N
Sbjct: 292 DENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVTTPNNH 351
Query: 356 -GKTFSERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414
G+ E+ T LWS EQGFAIGG+ER+SRLNGYLSELAAAAFVCR G
Sbjct: 352 IGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAFVCRGG 411
Query: 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA 474
V+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL ESGA
Sbjct: 412 VKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPLEESGA 471
Query: 475 LVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQGQGDKL
Sbjct: 472 LVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQGQGDKL 531
Query: 535 L 535
L
Sbjct: 532 L 532
|
|
| UNIPROTKB|P22567 argA "Amino-acid acetyltransferase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 384 (140.2 bits), Expect = 1.8e-81, Sum P(3) = 1.8e-81
Identities = 97/254 (38%), Positives = 142/254 (55%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
+V W R A PY+ +HR TFVV++ GE V P I+ D+ LH LG R VLV G+ Q
Sbjct: 4 YVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQ 63
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L+ RG +Y R+TD+ +L ++A G +R+ IEA+LS +S
Sbjct: 64 IEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMA---------AS 114
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
+ VA GN + A+ GVV+GVDY TGEV+++D + LD +V+LS LGYS
Sbjct: 115 PMQGARLRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYS 174
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDESGHLIRFLTLQEADSLIRQRVK 321
+GE+ N +VA A+ +EA+KLI + +LD SG L+R L Q+ + + QR+
Sbjct: 175 PTGEIFNLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL-QRLG 233
Query: 322 QSEIAANYVKAVAE 335
S A + A A+
Sbjct: 234 NS-YQAELLDAAAQ 246
|
|
| TIGR_CMR|CPS_0465 CPS_0465 "amino-acid N-acetyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 95/241 (39%), Positives = 147/241 (60%)
Query: 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
++ +VKWFR A PY+ AHRG T V++ GE V+ P I+ DI+ L LG++ V+V G
Sbjct: 5 EQNYVKWFRNAAPYINAHRGKTVVLMFGGEAVTHPNFANIIHDISLLRSLGVKLVVVHGA 64
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
QI + +RG E + R+TD+++L A +A G +R+ IEA LS G + N HG
Sbjct: 65 RPQIVDRMQQRGLEENVVSNIRVTDAQTLVAVKDATGSLRLHIEALLSTG--VVNSPMHG 122
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
R V++GNF+ AK GV +G+DY TG V+++D + +LD G +V+LS +
Sbjct: 123 SQIR-------VSTGNFVIAKPMGVRNGIDYKYTGTVRRIDSDGINMQLDYGSIVLLSPI 175
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILDESGHLIRFLTLQEADSLIRQ 318
GYS +GEV N +VAT A++++ADKLI D ++D+SG LIR +++ +L+ +
Sbjct: 176 GYSPTGEVFNLALEDVATQTAISLKADKLIAFTEDEGLIDKSGKLIRSCSVRTVKTLLDE 235
Query: 319 R 319
+
Sbjct: 236 K 236
|
|
| UNIPROTKB|P0A6C5 argA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 358 (131.1 bits), Expect = 2.5e-73, Sum P(3) = 2.5e-73
Identities = 83/252 (32%), Positives = 140/252 (55%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+ V+ FR + PY+ HRG TFV+++ GE + I+ DI LH LGIR V+V G
Sbjct: 8 ELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLVVVYGARP 67
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QID L+ HE Y R+TD+++L +AAG +++ I A+LS + N G
Sbjct: 68 QIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMS--LNNTPLQGA- 124
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
H ++V SGNF+ A+ GV DGVDY +G ++++D + +LD G +V++ +
Sbjct: 125 ---H---INVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAV 178
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSLIRQR 319
S +GE N + E+AT A+ ++A+K+I C G + ++ G ++ L EA + + +
Sbjct: 179 SVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQG-VTNDDGDIVSELFPNEAQARVEAQ 237
Query: 320 VKQSEIAANYVK 331
++ + + V+
Sbjct: 238 EEKGDYNSGTVR 249
|
|
| TIGR_CMR|SO_4245 SO_4245 "amino-acid acetyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 2.0e-68, Sum P(3) = 2.0e-68
Identities = 87/246 (35%), Positives = 135/246 (54%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
V + V FR + PY+ AHRG TFVV++ GE ++ IL D+A LH LGI+ VLV
Sbjct: 7 VRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEALAQNQFRGILNDVALLHSLGIKVVLVY 66
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QID L+ G E Y RITD +SL + AG ++ I A+LS + N
Sbjct: 67 GARPQIDAALAANGIEPAYHDGVRITDEDSLKVIKQVAGALQFDITARLSMS--LSNTPM 124
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G +++ SGNF+ A+ GV +GVD+ +G+V+++D ++ +LD C+V++
Sbjct: 125 QGAQ-------INLVSGNFVIAQPLGVDNGVDFCLSGKVRRIDAQGLKRQLDNHCIVLMG 177
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLI 316
+ S +GE N E+AT A+ ++ADK+I ILD +G +I L +A ++
Sbjct: 178 PIAASVTGESFNLTAEEIATQVAIKLKADKMIGFSSQNGILDRNGDVIAELMPNDAQKIL 237
Query: 317 RQRVKQ 322
+ +Q
Sbjct: 238 NKLAEQ 243
|
|
| UNIPROTKB|Q9KPQ0 argA "Amino-acid acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 87/242 (35%), Positives = 135/242 (55%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
+ VK FR++ PY+ AHRG T VV++ GE ++ I+ DIA LH LG++ VLV
Sbjct: 3 IRSTALVKGFRQSAPYVNAHRGKTMVVMLGGEAIADKNFPNIISDIALLHSLGVKVVLVH 62
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QI+++L + + Y RITD SL M+AAG ++ I A+LS + N
Sbjct: 63 GARPQINQILEKNQRDTPYHKGVRITDESSLGLVMQAAGQLQHAITARLSMS--LNNTPM 120
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G ++V SGNF+ ++ G+ +GVDY +G ++++DV + LD G +V+L
Sbjct: 121 AGTQ-------LNVVSGNFIISQPLGIDEGVDYCHSGRIRRIDVEGINRMLDLGSIVLLG 173
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSL 315
+ S +GE N + EVAT A+ ++ADKLI C G I+D G+ I L + + L
Sbjct: 174 PIASSVTGECFNLLSEEVATQVAIKLKADKLIGFCPQQG-IIDTKGNAIAELFPSDVERL 232
Query: 316 IR 317
++
Sbjct: 233 VK 234
|
|
| TIGR_CMR|VC_2316 VC_2316 "N-acetylglutamate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 2.5e-66, Sum P(3) = 2.5e-66
Identities = 87/242 (35%), Positives = 135/242 (55%)
Query: 78 VEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVP 137
+ VK FR++ PY+ AHRG T VV++ GE ++ I+ DIA LH LG++ VLV
Sbjct: 3 IRSTALVKGFRQSAPYVNAHRGKTMVVMLGGEAIADKNFPNIISDIALLHSLGVKVVLVH 62
Query: 138 GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRR 197
G QI+++L + + Y RITD SL M+AAG ++ I A+LS + N
Sbjct: 63 GARPQINQILEKNQRDTPYHKGVRITDESSLGLVMQAAGQLQHAITARLSMS--LNNTPM 120
Query: 198 HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
G ++V SGNF+ ++ G+ +GVDY +G ++++DV + LD G +V+L
Sbjct: 121 AGTQ-------LNVVSGNFIISQPLGIDEGVDYCHSGRIRRIDVEGINRMLDLGSIVLLG 173
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSL 315
+ S +GE N + EVAT A+ ++ADKLI C G I+D G+ I L + + L
Sbjct: 174 PIASSVTGECFNLLSEEVATQVAIKLKADKLIGFCPQQG-IIDTKGNAIAELFPSDVERL 232
Query: 316 IR 317
++
Sbjct: 233 VK 234
|
|
| TIGR_CMR|CHY_2263 CHY_2263 "acetylglutamate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 66/244 (27%), Positives = 120/244 (49%)
Query: 89 EAWPYLWAHRGGTFVVIISGE-IVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G +VS + ++ D+ + +GI V+V G +I ++L
Sbjct: 13 EALPYIKKFYGKTIVIKYGGHAMVSDQLKEAVINDLVLMKFVGINPVVVHGGGPEISRML 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
++ ++ ++ R+TD A +E + M++ K++ + I + G + V
Sbjct: 73 NKLNIKSNFINGLRVTDE----ATLEV---VEMVLVGKVNK-EIVGLIEKAGGKA----V 120
Query: 208 GVSVASGNFLAAKRKGVVD----GVDY---GATGEVKKVDVTRMRERLDGGCLVILSNLG 260
G+S + A +K + G +Y G GE+ +V+ + +D G + +++ +G
Sbjct: 121 GLSGKDAGLIKAHKKLAKNPEPTGEEYLDLGYVGEISEVNPEILLTLIDKGYIPVVAPVG 180
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP--ILDESGH--LIRFLTLQEADSLI 316
+ SGE N N EVA A+A++ADKLI + D P +L+E L+ T+ E LI
Sbjct: 181 SNGSGEFYNINADEVAAEVAVALKADKLIVLTDTPGILLNEKDENSLLSKATIAEVKELI 240
Query: 317 RQRV 320
+ V
Sbjct: 241 NRGV 244
|
|
| TIGR_CMR|GSU_0150 GSU_0150 "acetylglutamate kinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 66/238 (27%), Positives = 112/238 (47%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L + D+ L LGI V+V G QI++ L
Sbjct: 13 EALPYIRRFSGKTIVIKYGGHAMADEALKESFALDVIMLKSLGINPVVVHGGGPQINETL 72
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEV 207
G ++++ R+TD AA M+ + M++ +++ + + +HG + V
Sbjct: 73 KRYGIVSEFVKGMRVTD----AATMQV---VEMVLTGQVNK-EVVGYLNQHGGRA----V 120
Query: 208 GVSVASGNFLAAKR--------KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
G+S GN L ++ G V+ VD G G+V KV+ ++ G + +++ +
Sbjct: 121 GLSGKDGNLLLCRKLLQEVRQDDGTVESVDIGFVGDVVKVNQELIQTLEHGKFIPVIAPV 180
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLI 316
G GE N N VA A A+ A+KLI + D + D++G L+ + L LI
Sbjct: 181 GVGEQGESYNVNADLVAGRVAGALRAEKLILLTDVAGVKDKAGALLSSIRLDTVPGLI 238
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 634 | |||
| PLN02825 | 515 | PLN02825, PLN02825, amino-acid N-acetyltransferase | 0.0 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 1e-117 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 3e-77 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 3e-67 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 2e-57 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 4e-54 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 8e-46 | |
| COG1246 | 153 | COG1246, ArgA, N-acetylglutamate synthase and rela | 2e-33 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 2e-27 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 5e-27 | |
| TIGR00761 | 231 | TIGR00761, argB, acetylglutamate kinase | 7e-25 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 2e-23 | |
| PLN02512 | 309 | PLN02512, PLN02512, acetylglutamate kinase | 3e-19 | |
| cd04252 | 248 | cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acety | 2e-17 | |
| CHL00202 | 284 | CHL00202, argB, acetylglutamate kinase; Provisiona | 3e-17 | |
| PRK07757 | 152 | PRK07757, PRK07757, acetyltransferase; Provisional | 4e-17 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 6e-17 | |
| PRK14058 | 268 | PRK14058, PRK14058, acetylglutamate/acetylaminoadi | 5e-16 | |
| cd04251 | 257 | cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glut | 1e-13 | |
| PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate | 2e-12 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 3e-12 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 3e-12 | |
| PRK07922 | 169 | PRK07922, PRK07922, N-acetylglutamate synthase; Va | 4e-10 | |
| cd04249 | 252 | cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut | 1e-08 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 8e-08 | |
| pfam13508 | 79 | pfam13508, Acetyltransf_7, Acetyltransferase (GNAT | 5e-07 | |
| cd04301 | 65 | cd04301, NAT_SF, N-Acyltransferase superfamily: Va | 2e-06 | |
| PRK04531 | 398 | PRK04531, PRK04531, acetylglutamate kinase; Provis | 4e-06 | |
| pfam00583 | 80 | pfam00583, Acetyltransf_1, Acetyltransferase (GNAT | 2e-05 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 5e-05 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 6e-05 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 9e-05 | |
| pfam13527 | 127 | pfam13527, Acetyltransf_9, Acetyltransferase (GNAT | 0.001 |
| >gnl|CDD|215441 PLN02825, PLN02825, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 975 bits (2522), Expect = 0.0
Identities = 408/541 (75%), Positives = 454/541 (83%), Gaps = 28/541 (5%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV+WFREAWPY+ HRG TFVV+ISGE+V+ P+LD IL+DI+ LH LGI+FVLVPGTHVQ
Sbjct: 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
IDKLL+ERG E KY+G YRITDS +L A+MEAAG IR+MIEAKLSPGP I N+RRHGD+S
Sbjct: 61 IDKLLAERGREPKYVGAYRITDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNS 120
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
RWHEVGVSVASGNFLAAKR+GVV+GVD+GATGEVKK+DV+R++ERLD C+V+LSNLGYS
Sbjct: 121 RWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLDSNCIVLLSNLGYS 180
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322
SSGEVLNCNTYEVATACALAI ADKLICI+DGPILDE+G LIRF+TL+EAD LIR+R KQ
Sbjct: 181 SSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240
Query: 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIAT--FNNGVGFDNGNGLW 380
SEIAANYVKAV ED + DS+ + + NG+ F AT F NGVGFDNGNGL
Sbjct: 241 SEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGL- 299
Query: 381 SSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMG 440
S EQGFAIGG+ERLSRLNGYLSELAAAAFVCR GVQRVHLLDGTI GVLLLELF RDGMG
Sbjct: 300 SGEQGFAIGGEERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMG 359
Query: 441 TMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQII 500
TM+ASD+YEGTR A+V DL+GI+QII+PL ESG LVRRTDEELL+ALDSF VVEREG II
Sbjct: 360 TMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRALDSFVVVEREGSII 419
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR 560
ACAALFPFF+EKCGEVAAI VSPECRGQGQGDKLL
Sbjct: 420 ACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLL------------------------- 454
Query: 561 DYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
DYIEKKAASLGL+ LFLLTTRTADWF RGF ECSIE +PE RRKRINLSR SKYYMKKL
Sbjct: 455 DYIEKKAASLGLEKLFLLTTRTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMKKL 514
Query: 621 L 621
L
Sbjct: 515 L 515
|
Length = 515 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 349 bits (898), Expect = e-117
Identities = 125/255 (49%), Positives = 163/255 (63%), Gaps = 10/255 (3%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
QFV WFREA PY+ AHRG TFV+ GE V+ P D I+ DIA LH LGIR VLV G
Sbjct: 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARP 60
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDS 201
QID+ L+ERG E +Y RITD+ +L EAAG +R+ IEA LS G P +
Sbjct: 61 QIDQRLAERGLEPRYHRGLRITDAAALECVKEAAGAVRLEIEALLSMGLPNSPMAG---- 116
Query: 202 SRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261
+ V SGNF+ A+ GVVDGVD+G TGEV+++D +R +LD G +V+LS LGY
Sbjct: 117 -----ARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSPLGY 171
Query: 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
S +GEV N + +VATA A+A++ADKLI + DGP +LD+ G LIR LT QEA++L+
Sbjct: 172 SPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETGA 231
Query: 321 KQSEIAANYVKAVAE 335
+ A ++A E
Sbjct: 232 LLTNDTARLLQAAIE 246
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 252 bits (647), Expect = 3e-77
Identities = 106/241 (43%), Positives = 146/241 (60%), Gaps = 16/241 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHV 141
+FV WFR + PY+ AHRG TFV+++ GE ++ I+ DIA LH LGIR VLV G
Sbjct: 8 EFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARP 67
Query: 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRH 198
QI++ L+ RG E +Y R+TD+ +L +AAG +R+ IEA+LS P P+
Sbjct: 68 QIEEQLAARGIEPRYHKGLRVTDAAALECVKQAAGELRLDIEARLSMGLPNTPMAGAH-- 125
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
+ V SGNF+ A+ GV DGVDY TGEV+++D +R +LD G +V+LS
Sbjct: 126 ----------IRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVLLSP 175
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIR 317
LGYS +GE N EVAT A+A++ADKLI + +LDE G LIR L+ EA +L+
Sbjct: 176 LGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLE 235
Query: 318 Q 318
Sbjct: 236 A 236
|
Length = 441 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 3e-67
Identities = 94/217 (43%), Positives = 127/217 (58%), Gaps = 25/217 (11%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
L AA CR GV+R HL+ G LL ELF RDG+GTM+ + E R A + D+ GI
Sbjct: 250 LRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
++I+PL E G LVRR+ E+L + +D F V+ER+G II CAAL+PF +EK GE+A + V P
Sbjct: 310 ELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHP 369
Query: 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA 583
+ RG G+G++LL IE++A LGL LF+LTTRTA
Sbjct: 370 DYRGSGRGERLL-------------------------KRIEQRARQLGLKRLFVLTTRTA 404
Query: 584 DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
WF RGF ++ +PE +R+ N R SK +K L
Sbjct: 405 HWFLERGFVPVDVDDLPEAKRQLYNYQRRSKVLVKDL 441
|
Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 2e-57
Identities = 108/258 (41%), Positives = 150/258 (58%), Gaps = 20/258 (7%)
Query: 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQ 142
FV WFREA PY+ AHRG TFVV + GE+V L I+ DIA LH LG+R VLV G Q
Sbjct: 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQ 60
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLS---PGPPICNIRRHG 199
I+++L+ RG Y R+TD SL A +AAG +R+ IEA+LS P+ R
Sbjct: 61 IERILAARGRTPHYHRGLRVTDEASLEQAQQAAGTLRLAIEARLSMSLSNTPMAGSR--- 117
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ V SGNF+ A+ GV++GVDY TG ++K+D +R +LD G +V+LS L
Sbjct: 118 ---------LPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIVLLSPL 168
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLI--CIIDGPILDESGHLIRFLTLQEADSLIR 317
G+S +GE N + +VAT+ A++++ADKLI + G I D G L L+ QE +SL
Sbjct: 169 GHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPG-ISDPDGTLAAELSPQEVESLAE 227
Query: 318 QRVKQSEIAANYVKAVAE 335
+ SE + A +
Sbjct: 228 R--LGSETTRRLLSAAVK 243
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 4e-54
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 31/231 (13%)
Query: 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
G E RL L+AA CR GV R H++ G LL ELF RDG+GT ++ + +E
Sbjct: 230 GSETTRRL------LSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFE 283
Query: 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
R A + D+ GI +I+PL E G LVRR+ E L + + F ++E +G II CAAL+P+
Sbjct: 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA 343
Query: 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS 569
+E CGE+A + VSPE + G+G++LL +IE +A
Sbjct: 344 EEDCGEMACLAVSPEYQDGGRGERLL-------------------------AHIEDRARQ 378
Query: 570 LGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
+G+ LF+LTTRT WF+ RGF+ S++ +PE RRK N RNSK MK+L
Sbjct: 379 MGISRLFVLTTRTGHWFRERGFQTASVDELPEARRKLYNYQRNSKILMKRL 429
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 162 bits (413), Expect = 8e-46
Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 20/227 (8%)
Query: 98 RGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY 156
RG T V+ + G + L + DIA L +GIR V+V G QID++L++ G E ++
Sbjct: 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEF 60
Query: 157 LGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
+ R+TD+E+L GG + I A+LS +HG + VG+S GN
Sbjct: 61 VKGLRVTDAETLEVVEMVLGGTVNKEIVARLS---------KHGGQA----VGLSGVDGN 107
Query: 216 FLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEV 275
+ AK+ V DGVD G GE++KV+ + LD G + +++ + GE LN N
Sbjct: 108 LVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADTA 167
Query: 276 ATACALAIEADKLI--CIIDGPILDESGH--LIRFLTLQEADSLIRQ 318
A A A A++A+KLI + G +LD+ G LI L +EA+ LI Q
Sbjct: 168 AGALAAALKAEKLILLTDVPG-VLDDKGDPSLISELDAEEAEELIEQ 213
|
Length = 265 |
| >gnl|CDD|224167 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 2e-33
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 26/172 (15%)
Query: 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 510
R A+++D+ I ++I+PL G L+RR+ E+L + +D F ++ER+G++I CAAL P +
Sbjct: 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLE 62
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570
E GE+ ++ V P+ RG G+G++LL + + A L
Sbjct: 63 EDLGELRSLAVHPDYRGSGRGERLL-------------------------ERLLADAREL 97
Query: 571 GLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKLL 621
G+ LF+LTTR+ ++F RGF + +PEE N R SK LL
Sbjct: 98 GIKELFVLTTRSPEFFAERGFTRVDKDELPEEVWSSYNFCERRSKCLAFDLL 149
|
Length = 153 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 102 FVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160
V+ G + L DI L +GI V+V G +I++LL G E++++
Sbjct: 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGL 60
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+TD E++ G + +L + R G + VG+S G + A+
Sbjct: 61 RVTDKETMEIVEMVLAGK---VNKELVS-----LLNRAGGKA----VGLSGKDGGLIKAE 108
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+K +D G GEV +V+ + L+ G + +++ + GE N N A A A
Sbjct: 109 KK-EEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGETYNVNADTAAGAIA 167
Query: 281 LAIEADKLICI--IDGPILDESGHLIRFLTLQEADSLIRQ 318
A++A+KLI + + G +LD+ G LI LT +EA+ LI
Sbjct: 168 AALKAEKLILLTDVPG-VLDDPGSLISELTPKEAEELIED 206
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 5e-27
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G ++ L +DI L +GI V+V G QID+LL
Sbjct: 13 EALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELL 72
Query: 148 SERGHEAKYLGRYRITDSESLA-AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E++++ R+TD+E++ M AG + + + I +HG +
Sbjct: 73 KKLGIESEFVNGLRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGKA---- 119
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G + AK+ + D G GEV V+ + L+ G + ++S +G GE
Sbjct: 120 VGLSGKDGGLITAKKLE--EDEDLGFVGEVTPVNPALLEALLEAGYIPVISPIGVGEDGE 177
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
N N A A A A+ A+KLI + D P +LD+ G LI LT EA+ LI V
Sbjct: 178 TYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIEDGV 232
|
Length = 283 |
| >gnl|CDD|233118 TIGR00761, argB, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 7e-25
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 19/222 (8%)
Query: 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
+VI G S L+ DIAFL +GI+ V+V G +I++LL G ++ R
Sbjct: 1 TIVIKIGGAAISDLLEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLR 60
Query: 162 ITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
+TD E+L M G + + A L +HG ++ +G++ G A+
Sbjct: 61 VTDKETLEVVEMVLIGQVNKELVALL---------NKHGINA----IGLTGGDGQLFTAR 107
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+D D G GE+KKV+ + L G + ++S+L ++ G+ LN N A A A
Sbjct: 108 Y---LDKEDLGYVGEIKKVNKALIEALLKAGYIPVISSLALTAEGQALNVNADTAAGALA 164
Query: 281 LAIEADKLICIIDGP-ILDESG-HLIRFLTLQEADSLIRQRV 320
A+ A+KL+ + D P IL+ G LI + L E + LI+Q +
Sbjct: 165 AALGAEKLVLLTDVPGILNGDGQSLISEIPLDEIEQLIKQGI 206
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model [Amino acid biosynthesis, Glutamate family]. Length = 231 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 99.9 bits (250), Expect = 2e-23
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ RG T V+ G + L + +DI L ++GI V+V G +I+++L
Sbjct: 4 EALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEML 63
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM----IEAKLSPGPPICNIRRHGDSSR 203
+ G E++++ R+TD E ME M+ + ++ + I R G +
Sbjct: 64 KKLGIESEFVNGLRVTDEE----TMEIV---EMVLVGKVNKEI-----VSLINRAGGKA- 110
Query: 204 WHEVGVSVASGNFLAAKRK---GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260
VG+S GN + AK+K + + +D G GEV +V+ + L+ G + +++ +G
Sbjct: 111 ---VGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVG 167
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLI 316
GE N N A A A A++A+KLI + D +LD+ G LI ++L+EA+ LI
Sbjct: 168 VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELI 227
Query: 317 RQ 318
Sbjct: 228 AD 229
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|178128 PLN02512, PLN02512, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 3e-19
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 21/234 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P++ RG T VV G + P L +++D+ L +G+R VLV G +I+ L
Sbjct: 37 EALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWL 96
Query: 148 SERGHEAKYLGRYRITDSESL-AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE 206
+ G E ++ R+TD+E++ M G + + + I + G ++
Sbjct: 97 KKVGIEPQFKNGLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGTA---- 143
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + D G GEV +VD T +R +D G + +++ + G+
Sbjct: 144 VGLSGKDGRLLRARPS--PNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQ 201
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-IL---DESGHLIRFLTLQEADSLI 316
N N A A A+ A+KLI + D +L D+ G L++ L ++ LI
Sbjct: 202 AYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLI 255
|
Length = 309 |
| >gnl|CDD|239785 cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 2e-17
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162
V+ + G I+ LD + ++FL H+G+ ++V G Q+++ L G E +Y+ R+
Sbjct: 2 VIKVGGAIIED-DLDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRV 60
Query: 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK 222
TD E + A + + KL + + R+G +R + SG F A
Sbjct: 61 TDPE----TLAVARKVFLEENLKL-----VEALERNGARAR------PITSGVFEAE--- 102
Query: 223 GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALA 282
+D YG G++ V+ + + G L IL++L + SG++LN N A A
Sbjct: 103 -YLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAETPSGQLLNVNADVAAGELARV 161
Query: 283 IEADKLICIID-GPILDESGHLIRFLTL-QEADSLIRQ-------RVKQSEI 325
+E K++ + + G +LD +G I + L +E D L++Q ++K EI
Sbjct: 162 LEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQPWVKYGTKLKIKEI 213
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 248 |
| >gnl|CDD|133644 CHL00202, argB, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 84 VKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDP-ILKDIAFLHHLGIRFVLVPGTHVQ 142
V+ EA PY+ RG V+ G + + L I+KDI FL +G++ V+V G +
Sbjct: 8 VQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPE 67
Query: 143 IDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS 202
I+ L + K+ R+TD + ME + M++ K++ + +I +G +
Sbjct: 68 INFWLKQLNISPKFWNGIRVTDKVT----MEI---VEMVLAGKVNK-DLVGSINANGGKA 119
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
VG+ N + A+ D D G GE+++VD + L+ + +++++
Sbjct: 120 ----VGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAAD 172
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIR 317
G+ N N VA A + A+KLI + D P I D + LI L ++EA +L
Sbjct: 173 HDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNS-LISTLNIKEARNLAS 231
Query: 318 QRV 320
+
Sbjct: 232 TGI 234
|
Length = 284 |
| >gnl|CDD|236088 PRK07757, PRK07757, acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 4e-17
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 27/150 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
R A+++D+ I +I + G ++ R+ +EL + + FYV E EG+I+ C AL E
Sbjct: 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALH-ILWE 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLG 571
E+ ++ VS + RGQG G L+ C+ ++A LG
Sbjct: 64 DLAEIRSLAVSEDYRGQGIGRMLVEACL-------------------------EEARELG 98
Query: 572 LDMLFLLTTRTADWFKSRGFRECSIEMIPE 601
+ +F LT + ++F+ GFRE E +P+
Sbjct: 99 VKRVFALTYQP-EFFEKLGFREVDKEALPQ 127
|
Length = 152 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 6e-17
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ N L AA CR GV RVHL+ G LLLELF RDG+GT++
Sbjct: 228 ETGALLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|237599 PRK14058, PRK14058, acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 5e-16
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL----- 157
VV I G + P + L D+A L G R VLV G ++++LL G E +++
Sbjct: 3 VVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSG 60
Query: 158 --GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215
RY TD E+L + A I + +L + G ++ VG+S G
Sbjct: 61 VTSRY--TDRETLEVFIMAMALINKQLVERL---------QSLGVNA----VGLSGLDGG 105
Query: 216 FLAAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEV 267
L KRK V +G + TG++++V+ ++ L G L +++ S GE
Sbjct: 106 LLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAPPALSEEGEP 165
Query: 268 LNCNTYEVATACALAIEADKLICIIDGPIL----DESGHLIRFLTLQEADSL 315
LN + A A A A++A+ L+ + D P L + G LI +T +EA+ L
Sbjct: 166 LNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEEL 217
|
Length = 268 |
| >gnl|CDD|239784 cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---- 158
VV I G +VS D ++ DIA + G R ++V G +++ L G E K++
Sbjct: 2 VVKIGGSVVSDL--DKVIDDIA---NFGERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSG 56
Query: 159 -RYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFL 217
R R TD E+L + G I I A+L G + VG++ G L
Sbjct: 57 IRSRYTDKETLEVFVMVMGLINKKIVARL---------HSLGVKA----VGLTGLDGRLL 103
Query: 218 AAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 269
AKRK +V G + G TG+V+KV+ + LD G L ++S + YS GE LN
Sbjct: 104 EAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSPVAYSEEGEPLN 163
Query: 270 CNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSL---IRQRVKQSEIA 326
+ A A A A++A++LI + D L G +I +T+ +A+SL +K+ +A
Sbjct: 164 VDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEKAGGGMKRKLLA 223
Query: 327 ANYVKAVAE 335
A +AV
Sbjct: 224 A--AEAVEG 230
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). Length = 257 |
| >gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-12
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 433 LFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 492
L RD G V R A++TD+ I+ ++ G + R+ EL++ + SF V
Sbjct: 456 LAARDTSGVKV--------RPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAV 507
Query: 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552
E G++ CA+L+ + E+ ++GV + QGQG L+
Sbjct: 508 AEHHGEVTGCASLY-IYDSGLAEIRSLGVEAGWQVQGQGSALV----------------- 549
Query: 553 TNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 601
Y+ +KA + + +F+L TR ++F +GF S ++PE
Sbjct: 550 --------QYLVEKARQMAIKKVFVL-TRVPEFFMKQGFSPTSKSLLPE 589
|
Length = 614 |
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 48/230 (20%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 101 TFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159
V+ + G ++ + + ++IA L LGI+ V+V G DKLL+ G EA ++
Sbjct: 2 RIVIKLGGSSLTDKDEIKRLAEEIAKLLALGIKVVVVSGGGGFTDKLLAAYGIEAGFVRH 61
Query: 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA 219
L + A + ++ + R G V + ++ G A
Sbjct: 62 TAGAT--GLVLEAQLAAELNRIVVSLGE---------RLG----ARAVALLLSDGGLPAV 106
Query: 220 KRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS----SGEVLNCNTYEV 275
+ VD ++E L+ G + +++ G + + + ++ +
Sbjct: 107 RLDL---------------VDTEAIKELLEAGVVPVITGFGGENDTGETTTLGRGSSDTL 151
Query: 276 ATACALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQ 318
A A A+ ADKLI + +DG P + LI L+ EA+ L+
Sbjct: 152 AALLAEALGADKLIILTDVDGVYTADPRKNPDAKLIPELSYDEAEELLAA 201
|
This family includes kinases that phosphorylate a variety of amino acid substrates, as well as uridylate kinase and carbamate kinase. This family includes: Aspartokinase EC:2.7.2.4, Acetylglutamate kinase EC:2.7.2.8, Glutamate 5-kinase EC:2.7.2.11, Uridylate kinase EC:2.7.4.-, Carbamate kinase EC:2.7.2.2. Length = 230 |
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 63/250 (25%), Positives = 92/250 (36%), Gaps = 35/250 (14%)
Query: 103 VVIISGEIVSS-PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161
V+ G VSS L + + + L G R V+V G QI L G Y R
Sbjct: 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLR 60
Query: 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221
ITD E+ A A G ++I A L +HG + L +
Sbjct: 61 ITDRETDALAAMGEGMSNLLIAAAL---------EQHGIKAVP------------LDLTQ 99
Query: 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS---GEVLNCNTYEVATA 278
G + G G++ KV R++ L+ G L ILS G + G + + A
Sbjct: 100 AGFASP-NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSDSTAAL 158
Query: 279 CALAIEADKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331
A A++AD+L+ + +DG P L+ LT +EA L + A
Sbjct: 159 LAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKA--AD 216
Query: 332 AVAEEDITCF 341
A I
Sbjct: 217 PAARAGIPVR 226
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. Length = 248 |
| >gnl|CDD|236132 PRK07922, PRK07922, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 4e-10
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 28/143 (19%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R A+ +D+ IK+++ P + L+ + L +A+ F+V E G+++ C AL +
Sbjct: 9 RRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW- 67
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570
E E+ + V P RG+G G ++ LL A L
Sbjct: 68 EDLAEIRTVAVDPAARGRGVGHAIVE----RLLDV---------------------AREL 102
Query: 571 GLDMLFLLTTRTADWFKSRGFRE 593
GL +F+LT ++F GF E
Sbjct: 103 GLSRVFVLTFEV-EFFARHGFVE 124
|
Length = 169 |
| >gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S+A G A + GA G+ D + + + L G L I+S++G G+
Sbjct: 96 VGLSLADGGMTAVT----QLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
++N N + ATA A + AD L+ + D +LD LI L ++A LI Q V
Sbjct: 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV 205
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). Length = 252 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 8e-08
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 383 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442
EQG GG + AA GV+RVH++ G + LLLELF RDG+GTM
Sbjct: 212 EQGIITGGMIPK---------VEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTM 262
Query: 443 VA 444
+
Sbjct: 263 IV 264
|
Length = 265 |
| >gnl|CDD|222185 pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-07
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ F V +G+I+ L P + + + V PE RGQG G KLL +
Sbjct: 3 EHFLVAYDDGEIVGFLRLRPI--GEGAYIGGVAVDPEYRGQGYGSKLLRHLL 52
|
This domain catalyzes N-acetyltransferase reactions. Length = 79 |
| >gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-06
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 490 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
F V E +G+I+ A+L P + + V PE RG+G G LL
Sbjct: 1 FLVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAE 51
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65 |
| >gnl|CDD|235306 PRK04531, PRK04531, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 4e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDE 299
V + L G + ++++LG + SG++LN N A A++ K+I + G +LD
Sbjct: 119 VEAVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA 178
Query: 300 SGHLIRFLTLQ-EADSLIRQ 318
G LI + L E D L++Q
Sbjct: 179 DGKLISSINLSTEYDHLMQQ 198
|
Length = 398 |
| >gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-05
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 30/105 (28%)
Query: 493 VEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551
E +G+++ A+L + E+ + V PE RG+G G LL
Sbjct: 1 AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALL---------------- 44
Query: 552 STNGFPFLRDYIEKKAASLGLDMLFLLTT----RTADWFKSRGFR 592
+ +E+ A LGL + L ++ GF+
Sbjct: 45 ---------EALEEYARELGLKRIELEVLEDNEAAIALYEKLGFK 80
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (108), Expect = 5e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ AA R GV+ VH++DG + LLLELF +G+GTM+ D
Sbjct: 241 VEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283
|
Length = 283 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 6e-05
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
AA + GV++VH++DG + LLLELF +G+GTM+
Sbjct: 218 EAALEAL-EGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 9e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+ A GV+ H++DG + LLLE+F +G+GTM+
Sbjct: 240 VEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|222199 pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.001
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Query: 452 RTAKVTDLSGIKQIIQP--LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF- 508
R DL ++++ VE L +G+++ AL+PF
Sbjct: 3 RPLTEDDLDEFLELLEYAFQVEDSPAEIWEYFRPLLEEGRVLGAFDDGKLVGQLALYPFR 62
Query: 509 -------FKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ G + + PE RG+G KLL
Sbjct: 63 LNVPGKTY--PAGGITGVATYPEYRGRGLMRKLL 94
|
This domain catalyzes N-acetyltransferase reactions. Length = 127 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 634 | |||
| PLN02825 | 515 | amino-acid N-acetyltransferase | 100.0 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 100.0 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 100.0 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 100.0 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 100.0 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 100.0 | |
| PLN02512 | 309 | acetylglutamate kinase | 100.0 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 100.0 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 100.0 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 100.0 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 100.0 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 100.0 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 100.0 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 100.0 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 100.0 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 100.0 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 100.0 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 100.0 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 100.0 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 99.98 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 99.97 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 99.97 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 99.97 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.97 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 99.97 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.96 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.96 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.96 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.96 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.96 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.96 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.96 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.96 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.95 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.95 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.95 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.94 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 99.94 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.94 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.94 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.93 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.93 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.92 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.91 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.9 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.9 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.9 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.9 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 99.89 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.89 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.88 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.88 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.88 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.87 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.86 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.86 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.85 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.85 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.85 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.81 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 99.79 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 99.79 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 99.75 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 99.67 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 99.63 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 99.59 | |
| PRK08373 | 341 | aspartate kinase; Validated | 99.59 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 99.58 | |
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 99.58 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 99.54 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 99.52 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 99.51 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 99.51 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 99.47 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 99.45 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 99.42 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 99.41 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 99.4 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 99.4 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 99.39 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 99.38 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 99.37 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 99.37 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 99.35 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 99.34 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 99.33 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 99.33 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 99.31 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 99.31 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 99.3 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 99.29 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 99.29 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 99.29 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 99.29 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 99.28 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 99.28 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 99.28 | |
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 99.23 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 99.23 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 99.2 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 99.2 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 99.18 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 99.18 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 99.17 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 99.15 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.14 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 99.14 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 99.13 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 99.13 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 99.09 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.08 | |
| PLN02551 | 521 | aspartokinase | 99.07 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 99.05 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 99.03 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 99.0 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.0 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 98.99 | |
| PHA01807 | 153 | hypothetical protein | 98.99 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 98.99 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 98.97 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 98.96 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 98.95 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 98.94 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 98.94 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 98.86 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 98.83 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 98.81 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 98.75 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 98.58 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 98.38 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 98.31 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 98.31 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 98.31 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 98.25 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 98.23 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 98.18 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 98.17 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 98.08 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 98.06 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 98.01 | |
| PRK09181 | 475 | aspartate kinase; Validated | 97.92 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 97.92 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 97.91 | |
| cd04248 | 304 | AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S | 97.87 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 97.63 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 97.57 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 97.39 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 97.26 | |
| PF04768 | 170 | DUF619: Protein of unknown function (DUF619); Inte | 97.22 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 97.21 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 97.02 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 96.9 | |
| PF04958 | 342 | AstA: Arginine N-succinyltransferase beta subunit; | 96.76 | |
| COG3818 | 167 | Predicted acetyltransferase, GNAT superfamily [Gen | 96.73 | |
| KOG0456 | 559 | consensus Aspartate kinase [Amino acid transport a | 96.69 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 96.41 | |
| TIGR03244 | 336 | arg_catab_AstA arginine N-succinyltransferase. In | 96.35 | |
| TIGR03245 | 336 | arg_AOST_alph arginine/ornithine succinyltransfera | 96.18 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.16 | |
| PRK10456 | 344 | arginine succinyltransferase; Provisional | 96.12 | |
| TIGR03243 | 335 | arg_catab_AOST arginine and ornithine succinyltran | 96.08 | |
| TIGR03694 | 241 | exosort_acyl putative PEP-CTERM/exosortase system- | 95.75 | |
| COG5630 | 495 | ARG2 Acetylglutamate synthase [Amino acid transpor | 95.66 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 95.63 | |
| PF00765 | 182 | Autoind_synth: Autoinducer synthetase; InterPro: I | 95.23 | |
| PRK13834 | 207 | putative autoinducer synthesis protein; Provisiona | 94.83 | |
| KOG4135 | 185 | consensus Predicted phosphoglucosamine acetyltrans | 94.61 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 94.39 | |
| COG1243 | 515 | ELP3 Histone acetyltransferase [Transcription / Ch | 93.29 | |
| COG3138 | 336 | AstA Arginine/ornithine N-succinyltransferase beta | 92.8 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 92.31 | |
| COG5628 | 143 | Predicted acetyltransferase [General function pred | 91.61 | |
| PF13880 | 70 | Acetyltransf_13: ESCO1/2 acetyl-transferase | 91.08 | |
| COG3916 | 209 | LasI N-acyl-L-homoserine lactone synthetase [Signa | 89.6 | |
| KOG2036 | 1011 | consensus Predicted P-loop ATPase fused to an acet | 89.15 | |
| cd04264 | 99 | DUF619-NAGS DUF619 domain of various N-acetylgluta | 87.65 | |
| cd04265 | 99 | DUF619-NAGS-U DUF619 domain of various N-acetylglu | 87.37 | |
| PF02799 | 190 | NMT_C: Myristoyl-CoA:protein N-myristoyltransferas | 84.55 | |
| PF01233 | 162 | NMT: Myristoyl-CoA:protein N-myristoyltransferase, | 84.54 | |
| KOG2779 | 421 | consensus N-myristoyl transferase [Lipid transport | 82.89 | |
| TIGR03019 | 330 | pepcterm_femAB FemAB-related protein, PEP-CTERM sy | 82.65 | |
| PF01853 | 188 | MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz i | 81.04 |
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-98 Score=829.46 Aligned_cols=508 Identities=79% Similarity=1.241 Sum_probs=471.7
Q ss_pred HHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 006709 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (634)
Q Consensus 83 ~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~Rv 162 (634)
||+|||+|+|||++||+||||||+||+++.++.+++++.||+.|+..|+++||||||||||+..++++|++++|++|+|+
T Consensus 1 ~v~~fr~a~pYI~~~rgktfVIk~gG~~l~~~~~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~~gi~~~f~~G~RV 80 (515)
T PLN02825 1 FVRWFREAWPYIQGHRGSTFVVVISGEVVAGPHLDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAERGREPKYVGAYRI 80 (515)
T ss_pred ChhHHHhhhHHHHHHCCCEEEEEECchhhcCchHHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 68999999999999999999999999999887899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHH
Q 006709 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (634)
Q Consensus 163 T~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~ 242 (634)
|++++|+++++++|++|..|++.|++|+++..|+++|+++|++.+++++.||||++++|+|+++++||||+|+|+.||.+
T Consensus 81 Td~~~L~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~ 160 (515)
T PLN02825 81 TDSAALQASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVS 160 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHH
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCCCCccccccCHHHHHHHHHhhchh
Q 006709 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQ 322 (634)
Q Consensus 243 ~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~~gklI~~ls~~e~~~li~~~~~~ 322 (634)
.|+.+|++|.|||++|++++.+|+++|+|+|++|+++|.+|+||||||+||+++++.++++|++++.+|++.+++++.+|
T Consensus 161 ~i~~~L~~g~Ipvisplg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~~~~~~g~li~~l~~~e~~~li~~~~~~ 240 (515)
T PLN02825 161 RIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQ 240 (515)
T ss_pred HHHHHHhCCCeEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcceecCCCCCcCcCCHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999888889
Q ss_pred hhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccc-------hhccccCCcccCCCCCCcccccccccCcccccc
Q 006709 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSER-------RIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (634)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~ 395 (634)
|+|+|++.|||++++.++...-.. .+..|.++.+. ....|.++++|+++.| .+.+|+|++||+|++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 314 (515)
T PLN02825 241 SEIAANYVKAVGGEDYSYSLGLDS-----VNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNG-LSGEQGFAIGGEERLS 314 (515)
T ss_pred chhhhhhhhhcccccccccccccc-----ccccccccccccccccccccccccccccccCccc-ccccccccccchhhch
Confidence 999999999999986553221100 00112222211 2223566666666655 3678999999999999
Q ss_pred cccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHHHcccC
Q 006709 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGAL 475 (634)
Q Consensus 396 ~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~ 475 (634)
+...+++||.+|.+||++||+|+||+|++.+|+||+||||+||+||+|++|+|+.||+|+.+|++.|.+|++++.+.+..
T Consensus 315 ~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~l 394 (515)
T PLN02825 315 RLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGIL 394 (515)
T ss_pred hhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCC
Q 006709 476 VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (634)
Q Consensus 476 ~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~ 555 (634)
..++.+.+...+..|+|++.||+||||+.++|+..+..+||.+++|+|+|||+|+|++||
T Consensus 395 v~rs~e~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL-------------------- 454 (515)
T PLN02825 395 VRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLL-------------------- 454 (515)
T ss_pred cCCCHHHHHhcCCcEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHH--------------------
Confidence 888999999999999999999999999999988777889999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeecC
Q 006709 556 FPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 621 (634)
Q Consensus 556 ~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~ 621 (634)
+++++.|+++|++.+++.++++.+||+++||++++...+|+.+++.||+.||||+|||+|.
T Consensus 455 -----~~le~~Ar~~G~~~L~Lltt~a~~fY~k~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k~l~ 515 (515)
T PLN02825 455 -----DYIEKKAASLGLEKLFLLTTRTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515 (515)
T ss_pred -----HHHHHHHHHCCCCEEEEEeCcHHHHHHHCCCEEeChhhCCHHHHhhcCccCCcEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999984
|
|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-76 Score=648.71 Aligned_cols=428 Identities=45% Similarity=0.756 Sum_probs=393.6
Q ss_pred HHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 006709 83 FVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (634)
Q Consensus 83 ~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~Rv 162 (634)
|+++||||+|||++||++++|||+||++++++++.+++++|+.|+..|.++||||||||++++.++++|++++|++|+|+
T Consensus 1 ~~~~~~~~~~~i~~~~~~~~ViK~GG~~~~~~~~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~~g~~~~~~~G~Rv 80 (429)
T TIGR01890 1 FVAWFREAAPYINAHRGKTFVVGLGGELVEGGNLGNIVADIALLHSLGVRLVLVHGARPQIERILAARGRTPHYHRGLRV 80 (429)
T ss_pred ChhHHhhhhHHHHHhCCCEEEEEEChhhccCccHHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHHcCCCceeeCCccc
Confidence 78999999999999999999999999999887789999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHH
Q 006709 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (634)
Q Consensus 163 T~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~ 242 (634)
|++++|+++.+++|++|..|++.|+ +++-..+.+.+++++.|++++.++++++.+++|+|++|+|+.+|.+
T Consensus 81 T~~~~l~~~~~~~g~vn~~l~~~l~---------~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~ 151 (429)
T TIGR01890 81 TDEASLEQAQQAAGTLRLAIEARLS---------MSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTE 151 (429)
T ss_pred CCHHHHHHHHHHhChHHHHHHHHHH---------hcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHH
Confidence 9999999986669999999999864 3321112224568999999999999887788999999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCHHHHHHHHHhhch
Q 006709 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 243 ~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~~e~~~li~~~~~ 321 (634)
.|+.+|+.|+|||++|++++.+|+.+|+|+|.+|++||.+|+|++|||+|||+|+ +.++++|++++.+|+++++....
T Consensus 152 ~l~~ll~~g~ipvi~pi~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~g~~i~~i~~~~~~~l~~~~~- 230 (429)
T TIGR01890 152 GIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPDGTLAAELSPQEVESLAERLG- 230 (429)
T ss_pred HHHHHHHCCCeEEECCcccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCcccCCHHHHHHHHHhcc-
Confidence 9999999999999999999999999999999999999999999999999999997 45799999999999988875310
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
+ | + |.
T Consensus 231 ------------------------------~-------------------------~-----------~---------~~ 235 (429)
T TIGR01890 231 ------------------------------S-------------------------E-----------T---------TR 235 (429)
T ss_pred ------------------------------C-------------------------C-----------C---------cH
Confidence 0 1 1 59
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHHHcccCccCCHH
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 481 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~ 481 (634)
+||++|..|++.||++|||+||+.+++|+.|||+++|.||++..|.|+.||+++.+|++.+.++++++...++..+++.+
T Consensus 236 ~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~ 315 (429)
T TIGR01890 236 RLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFESIRQATIDDIGGIAALIRPLEEQGILVRRSRE 315 (429)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEeccchhheEECCHHHHHHHHHHHHHHHHcCCchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888777777777888
Q ss_pred HHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHH
Q 006709 482 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRD 561 (634)
Q Consensus 482 ~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~ 561 (634)
.+.+.+..++|++.+++++||+.+.++.....++|..++|+|+|||||+|++|| +
T Consensus 316 ~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll-------------------------~ 370 (429)
T TIGR01890 316 YLEREISEFSIIEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLL-------------------------A 370 (429)
T ss_pred HHHhhcCcEEEEEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHH-------------------------H
Confidence 888888889999999999999999987666779999999999999999999999 9
Q ss_pred HHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeec
Q 006709 562 YIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 562 ~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
+++++|+++|++.+++.++.+.+||+++||++++...+|+.+++.|++.|+|++|||.|
T Consensus 371 ~l~~~A~~~G~~~l~v~~~~a~~fY~k~GF~~~g~~~l~~~~~~~~~~~r~~~~~~~~~ 429 (429)
T TIGR01890 371 HIEDRARQMGISRLFVLTTRTGHWFRERGFQTASVDELPEARRKLYNYQRNSKILMKRL 429 (429)
T ss_pred HHHHHHHHcCCCEEEEeecchHHHHHHCCCEECChhhCCHHHHHHhcccccCceeeecC
Confidence 99999999999999888888899999999999999999999999999999999999986
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate. |
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-73 Score=626.83 Aligned_cols=433 Identities=46% Similarity=0.760 Sum_probs=393.9
Q ss_pred HHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCc
Q 006709 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160 (634)
Q Consensus 81 ~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~ 160 (634)
..|+++||+++|||++||++++|||+||++|+++++++++++|+.|+..|+++||||||||+++..++++|+++++++|+
T Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~VIk~GG~~l~~~~~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~G~ 86 (441)
T PRK05279 7 TEFVDWFRHSAPYINAHRGKTFVIMLGGEAIAHGNFSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAARGIEPRYHKGL 86 (441)
T ss_pred hHHHHHHHHHhHHHHHhCCCEEEEEECchhccChhHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHcCCCceecCCc
Confidence 56999999999999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCC-cceeEEeeccCCceeeeeecccccCccccccceEEEe
Q 006709 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 239 (634)
Q Consensus 161 RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~-~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~v 239 (634)
|+|++++|+++.++.|++|..|++.+++ |++. ++....+++.+++++.++++++.++.|+|++|+++.+
T Consensus 87 RvT~~~~l~~~~~~~g~v~~~l~~~l~~----------g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v 156 (441)
T PRK05279 87 RVTDAAALECVKQAAGELRLDIEARLSM----------GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRI 156 (441)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHhc----------cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEE
Confidence 9999999999855579999999987532 4441 1123457888999999999988788899999999999
Q ss_pred cHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCHHHHHHHHHh
Q 006709 240 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 240 d~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~~e~~~li~~ 318 (634)
|.+.|+.+|++|+|||++|++.+.+|+.+|+|+|.+|++||.+|+|++|||+|||+|+ ++++++|++++.+++++++..
T Consensus 157 ~~~~i~~ll~~g~ipV~~~i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~~~~~i~~i~~~~~~~~~~~ 236 (441)
T PRK05279 157 DAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLEA 236 (441)
T ss_pred eHHHHHHHHHCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCchhhhCCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999987 467999999999998888742
Q ss_pred hchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccccccc
Q 006709 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (634)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~ 398 (634)
-. . | ..+||
T Consensus 237 ~~------------------------------------------------------~--~-------~~~gg-------- 245 (441)
T PRK05279 237 LE------------------------------------------------------D--G-------DYNSG-------- 245 (441)
T ss_pred hh------------------------------------------------------c--C-------CCCcc--------
Confidence 10 0 1 23566
Q ss_pred CCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHHHcccCccC
Q 006709 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR 478 (634)
Q Consensus 399 ~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~ 478 (634)
|.+||++|..+++.|+++|||+|++.+++|+.|||+.+|.||+|.+|.|..||+++++|++.+.+++.++....+...+
T Consensus 246 -M~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~~y~~IR~at~~D~~~I~~L~~~~~~~~~~~~~ 324 (441)
T PRK05279 246 -TARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGILELIRPLEEQGILVRR 324 (441)
T ss_pred -HHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecCchHHeEeCCHHHHHHHHHHHHHHHHcCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887777766677
Q ss_pred CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcc
Q 006709 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF 558 (634)
Q Consensus 479 ~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~ 558 (634)
+.+.+.+....+++++.+++++||+.+.++.....++|..++|+|+|||||+|++||
T Consensus 325 ~~~~l~~~~~~~~va~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll----------------------- 381 (441)
T PRK05279 325 SREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLL----------------------- 381 (441)
T ss_pred CHHHHhcccCcEEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHH-----------------------
Confidence 788888777889999999999999998876555678999999999999999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeec
Q 006709 559 LRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 559 ~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
++++++|++.|+..+++.++++..||+++||++++...+|+.++..|++.|+||+|+|+|
T Consensus 382 --~~l~~~a~~~g~~~l~l~~~~a~~fY~k~GF~~~g~~~~~~~~~~~y~~~r~~~~~~~~~ 441 (441)
T PRK05279 382 --KRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVDDLPEAKRQLYNYQRRSKVLVKDL 441 (441)
T ss_pred --HHHHHHHHHcCCCEEEEecchHHHHHHHCcCEECChhhCcHHHHHhhCcccCceeeeecC
Confidence 999999999999999988888999999999999999999999999999999999999986
|
|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-52 Score=428.21 Aligned_cols=260 Identities=38% Similarity=0.611 Sum_probs=243.3
Q ss_pred cCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 006709 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a~ 175 (634)
++|++|||+||+++.+++ ++++++||++|+..|.++|||||||||++..++++|++++|++|+|+|++++|+++ |++.
T Consensus 1 ~~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~~gie~~f~~glRvTd~~tlevv~mvl~ 80 (265)
T COG0548 1 RGKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAKLGIEPEFVKGLRVTDAETLEVVEMVLG 80 (265)
T ss_pred CCceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHHcCCCCeeeCCEEcCCHHHHHHHHHHHH
Confidence 579999999999999988 89999999999999999999999999999999999999999999999999999998 7888
Q ss_pred hHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 176 G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
|++|+.|++. |+++|.+ ++++++.|++|++++++++..++|+||+|+++.+|++.|+.+|++|+|||
T Consensus 81 G~vNk~iva~---------l~~~g~~----avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpV 147 (265)
T COG0548 81 GTVNKEIVAR---------LSKHGGQ----AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPV 147 (265)
T ss_pred HHHHHHHHHH---------HHHhCCc----ceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceE
Confidence 8999999997 5788886 89999999999999999988889999999999999999999999999999
Q ss_pred EcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCc--cccccCHHHHHHHHHhhchhhhhHHHHHHh
Q 006709 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGH--LIRFLTLQEADSLIRQRVKQSEIAANYVKA 332 (634)
Q Consensus 256 v~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gk--lI~~ls~~e~~~li~~~~~~~~~~~~~~~~ 332 (634)
++|++++.+|+.+|+|+|++|.++|.+|+|+|||||||++|+. ..+. +|++++.+|++++++++.
T Consensus 148 iapia~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~------------ 215 (265)
T COG0548 148 IAPIAVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGI------------ 215 (265)
T ss_pred EecceECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCC------------
Confidence 9999999999999999999999999999999999999999874 3444 999999999999986532
Q ss_pred hhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHH
Q 006709 333 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 412 (634)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~ 412 (634)
.+|| |.+||++|+.||+
T Consensus 216 ------------------------------------------------------i~~G---------Mi~Kv~~a~~A~~ 232 (265)
T COG0548 216 ------------------------------------------------------ITGG---------MIPKVEAALEALE 232 (265)
T ss_pred ------------------------------------------------------ccCc---------cHHHHHHHHHHHH
Confidence 1234 9999999999999
Q ss_pred cCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 413 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 413 ~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
.||++|||+||+.+++||.|||+++++||++.+
T Consensus 233 ~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~~ 265 (265)
T COG0548 233 SGVRRVHIISGRVPHSLLLELFTRDGIGTMIVR 265 (265)
T ss_pred hCCCeEEEecCCCcchHHHHHhcCCCcceEecC
Confidence 999999999999999999999999999999853
|
|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=428.46 Aligned_cols=278 Identities=51% Similarity=0.799 Sum_probs=253.5
Q ss_pred HHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 006709 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (634)
Q Consensus 82 ~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~R 161 (634)
+|+++||+++|||++||++++|||+||+++.++++++++++|+.|++.|+++||||||||++++++.++|+++++++|+|
T Consensus 1 ~~~~~~~~~~~yi~~~~~~~~VIKlGG~ai~~~~l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~~gi~~~~~~G~R 80 (280)
T cd04237 1 QFVDWFREAAPYINAHRGKTFVIAFGGEAVAHPNFDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAERGLEPRYHRGLR 80 (280)
T ss_pred ChHHHHHHHhHHHHHhCCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCccccCCcC
Confidence 59999999999999999999999999999988789999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCC-cceeEEeeccCCceeeeeecccccCccccccceEEEec
Q 006709 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS-RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (634)
Q Consensus 162 vT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~-~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd 240 (634)
+|++++|+++.+++|.+|+.|++.|+ + |++. +.+..++++.+++++.++++++.++.|++++|+++.+|
T Consensus 81 vT~~~~l~~~~~~~g~v~~~l~~~l~---------~-~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~ 150 (280)
T cd04237 81 ITDAAALECVKEAAGAVRLEIEALLS---------M-GLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRID 150 (280)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHH---------h-hccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEc
Confidence 99999999985557999999998753 2 4431 11234678889999999999888889999999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHHHHHHHhh
Q 006709 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 241 ~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~~~li~~~ 319 (634)
.+.|+++|++|+|||++|++.+.+|+.+|+|+|.+|++||.+|+|++|+|+||+||+. .++++|++++.+|+++++..+
T Consensus 151 ~~~i~~lL~~g~ipv~~~~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~~~~i~~i~~~e~~~l~~~~ 230 (280)
T cd04237 151 ADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETG 230 (280)
T ss_pred HHHHHHHHHCCCEEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCccccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999975 579999999999999987542
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
. +.+||
T Consensus 231 ~-----------------------------------------------------------------~~~gg--------- 236 (280)
T cd04237 231 A-----------------------------------------------------------------LLTND--------- 236 (280)
T ss_pred C-----------------------------------------------------------------CCCCC---------
Confidence 1 12456
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|.+||++|..|+++||+++||+|++.+++|+.|+|+++|.||++
T Consensus 237 M~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 237 TARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 99999999999999999999999999999999999999999985
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-50 Score=423.05 Aligned_cols=274 Identities=27% Similarity=0.451 Sum_probs=252.0
Q ss_pred hHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 80 ~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
..+++++||+++|||++||++++|||+||+++.++. .+.+++||+.|+..|.++|||||||++++..++++|+++++++
T Consensus 4 ~~~~~~~~~~~~pyi~~~~~~~~VIk~gG~~~~~~~l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~g~~~~~~~ 83 (284)
T CHL00202 4 NDERVQVLSEALPYIQKFRGRIMVIKYGGAAMKNLILKADIIKDILFLSCIGLKIVVVHGGGPEINFWLKQLNISPKFWN 83 (284)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHCCCCCEeEC
Confidence 347899999999999999999999999999998876 5699999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEE
Q 006709 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (634)
Q Consensus 159 G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~ 237 (634)
|+|+|++++|+++ ++++|++|..|++. |+++|++ ++++++.|++++++++. ++.|++++|+++
T Consensus 84 G~rvT~~~~l~~~~~~l~g~ln~~lv~~---------L~~~Gv~----av~l~~~d~~~i~a~~~---~~~d~~~~G~i~ 147 (284)
T CHL00202 84 GIRVTDKVTMEIVEMVLAGKVNKDLVGS---------INANGGK----AVGLCGKDANLIVARAS---DKKDLGLVGEIQ 147 (284)
T ss_pred CcccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----eeeeeeccCCEEEEEeC---CCcccccceeEE
Confidence 9999999999998 67889999999997 5788887 89999999999999874 456899999999
Q ss_pred EecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCC----CCccccccCHHHHH
Q 006709 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEAD 313 (634)
Q Consensus 238 ~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~----~gklI~~ls~~e~~ 313 (634)
.+|.+.|+.+|++|.|||++|++.+.+|+.+|+|+|.+|++||.+|+||+|+|+||++|+.. .+++|++++.+|++
T Consensus 148 ~v~~~~i~~ll~~g~iPVi~~~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~~d~~~~i~~i~~~e~~ 227 (284)
T CHL00202 148 QVDPQLIDMLLEKNYIPVIASVAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNSLISTLNIKEAR 227 (284)
T ss_pred ecCHHHHHHHHHCCCEEEECCCccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCCCCCCCccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999742 37899999998888
Q ss_pred HHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccc
Q 006709 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (634)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~ 393 (634)
+++..+ +.+||
T Consensus 228 ~l~~~g------------------------------------------------------------------~~tGG--- 238 (284)
T CHL00202 228 NLASTG------------------------------------------------------------------IISGG--- 238 (284)
T ss_pred HHHhcC------------------------------------------------------------------CCCCC---
Confidence 776321 24566
Q ss_pred cccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 394 ~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+||++|..|+++|++++||+||+.+++||.|+|++++.||+|.
T Consensus 239 ------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 239 ------MIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 999999999999999999999999999999999999999999984
|
|
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-48 Score=407.72 Aligned_cols=276 Identities=29% Similarity=0.478 Sum_probs=253.2
Q ss_pred chHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccccc
Q 006709 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL 157 (634)
Q Consensus 79 ~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~ 157 (634)
....|+.+||+++|||++||++++||||||+++++++ ...++++|+.|+..|.++|||||||++++..++++|++++++
T Consensus 27 ~~~~~~~~~r~~~pyi~~~~~~tiVIKlGGs~i~d~~~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~~gi~~~~~ 106 (309)
T PLN02512 27 TNLSRVDILSEALPFIQRFRGKTVVVKYGGAAMKDPELKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWLKKVGIEPQFK 106 (309)
T ss_pred chHHHHHHHHHHhHHHHHHCCCeEEEEECCeeccChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCCcCC
Confidence 4568999999999999999999999999999999877 467999999999999999999999999999999999999999
Q ss_pred CCccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceE
Q 006709 158 GRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV 236 (634)
Q Consensus 158 ~G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v 236 (634)
+|+|+|+.++++++ ++++|++|..|++. |+++|++ ++++++.|++|+++++++ ++.|++++|++
T Consensus 107 ~G~rvT~~~~lei~~~~l~g~ln~~lv~~---------L~~~Gv~----av~l~g~d~~~i~a~~~~--~~~~~~~~G~i 171 (309)
T PLN02512 107 NGLRVTDAETMEVVEMVLVGKVNKSLVSL---------INKAGGT----AVGLSGKDGRLLRARPSP--NSADLGFVGEV 171 (309)
T ss_pred CCCcCCCHHHHHHHHHHHhhHHHHHHHHH---------HHHcCCC----eEEeehhhCCEEEEEEcC--cCcccccccee
Confidence 99999999999998 67789999999986 5789998 899999999999999863 34689999999
Q ss_pred EEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC----CCCccccccCHHHH
Q 006709 237 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEA 312 (634)
Q Consensus 237 ~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld----~~gklI~~ls~~e~ 312 (634)
+.+|.+.|+.+|+.|.|||++|++++.+|+.+++|+|.+|++||.+|+||+|+|+|||+|+. +++++|++++.+|+
T Consensus 172 ~~v~~~~i~~lL~~g~IPVi~~~~~d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~~~~~lI~~i~~~e~ 251 (309)
T PLN02512 172 TRVDPTVLRPLVDDGHIPVIATVAADEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGV 251 (309)
T ss_pred eecCHHHHHHHHhCCCEEEEeCceECCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCCCCcCCCcccCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999974 35899999999888
Q ss_pred HHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccc
Q 006709 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (634)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~ 392 (634)
++++..+ +.+||
T Consensus 252 ~~l~~~~------------------------------------------------------------------~vtGG-- 263 (309)
T PLN02512 252 RKLIADG------------------------------------------------------------------KIAGG-- 263 (309)
T ss_pred HHHHhCC------------------------------------------------------------------CCCCc--
Confidence 8775321 24566
Q ss_pred ccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 393 ~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+||++|..+++.|++++||+||..++.++.++|++++.||.|.
T Consensus 264 -------M~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 264 -------MIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 999999999999999999999999999998899999999999985
|
|
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-47 Score=394.34 Aligned_cols=277 Identities=34% Similarity=0.536 Sum_probs=253.3
Q ss_pred hHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 80 ~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
...++.+||+++|||++||++++|||+||+++++++ +..++++|+.|++.|.++|||||||++++.+++++++..++.+
T Consensus 4 ~~~~~~~~r~~~~yi~~~~~~~iViK~GGs~l~~~~~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~~g~~~~~~~ 83 (283)
T PRK00942 4 ALEKAEVLSEALPYIQRFMGKTIVIKYGGNAMTDEELKEAFARDIVLLKQVGINPVVVHGGGPQIDELLKKLGIESEFVN 83 (283)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEEChHHhcCcchHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHHHCCCCcEeeC
Confidence 357899999999999999999999999999999887 6889999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEE
Q 006709 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (634)
Q Consensus 159 G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~ 237 (634)
|+|+|+.++++.. ++++|++|..+++. |+++|++ ++++++.+++++++++. .+++|++++|+++
T Consensus 84 g~~~t~~~~l~~~~~a~~G~l~~~i~~~---------L~~~Gv~----a~~l~~~~~~~~ta~~~--~~~~~~~~~g~i~ 148 (283)
T PRK00942 84 GLRVTDAETMEVVEMVLAGKVNKELVSL---------INKHGGK----AVGLSGKDGGLITAKKL--EEDEDLGFVGEVT 148 (283)
T ss_pred CEecCCHHHHHHHHHHHcCchHHHHHHH---------HHhCCCC----ccceeeccCCEEEEEEC--CCCCCCccccceE
Confidence 9999999999987 45558999998875 6789998 88999999999999886 5678999999999
Q ss_pred EecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHHHHHH
Q 006709 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 238 ~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~~~li 316 (634)
.+|.+.|+.+|++|.|||++|++++.+|+++|+|+|.+|++||.+|+||+|+|+|||+|+. .++++|++++.+|+++++
T Consensus 149 ~i~~~~l~~ll~~g~vpVv~~~~~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~~~~i~~i~~~e~~~~~ 228 (283)
T PRK00942 149 PVNPALLEALLEAGYIPVISPIGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELI 228 (283)
T ss_pred EECHHHHHHHHHCCCEEEEcCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCCCcccccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999975 469999999998888875
Q ss_pred HhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccccc
Q 006709 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (634)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~ 396 (634)
..+ +.+||
T Consensus 229 ~~~------------------------------------------------------------------~~tgg------ 236 (283)
T PRK00942 229 EDG------------------------------------------------------------------VITGG------ 236 (283)
T ss_pred HcC------------------------------------------------------------------CCCCc------
Confidence 321 23456
Q ss_pred ccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 397 ~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+||++|..+++.|+.+|+|+||..+++||.++|++++.||+|.++
T Consensus 237 ---m~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 283 (283)
T PRK00942 237 ---MIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283 (283)
T ss_pred ---hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEecC
Confidence 99999999999999999999999999999899999999999999764
|
|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=385.16 Aligned_cols=269 Identities=32% Similarity=0.525 Sum_probs=246.4
Q ss_pred HHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCH
Q 006709 87 FREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS 165 (634)
Q Consensus 87 ~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~ 165 (634)
+|+|+|||++||++++|||+||+++++++ .++++++|+.|+..|.++|||||||++++..+++++++.++.+|+|+|++
T Consensus 2 ~~~~~~yi~~~~~~~~ViKlGGs~i~~~~~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~~g~~~~~~~g~r~t~~ 81 (279)
T cd04250 2 LIEALPYIQKFRGKTVVIKYGGNAMKDEELKESFARDIVLLKYVGINPVVVHGGGPEINEMLKKLGIESEFVNGLRVTDE 81 (279)
T ss_pred hhhhhHHHHHHcCCEEEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHHCCCCCEeECCeecCCH
Confidence 79999999999999999999999999877 67999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeeccc---ccCccccccceEEEecH
Q 006709 166 ESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDV 241 (634)
Q Consensus 166 ~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~---~~g~d~g~~G~v~~vd~ 241 (634)
++++.+ ++++|++|..|++. |+++|++ ++++++.|++++++++.++ ++++||+++|+++.++.
T Consensus 82 ~~~~~~~~~~~g~ln~~l~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~ 148 (279)
T cd04250 82 ETMEIVEMVLVGKVNKEIVSL---------INRAGGK----AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNP 148 (279)
T ss_pred HHHHHHHHHHcCchHHHHHHH---------HHHcCCC----cceeecCCCCEEEEEECcccccCCCcccCcccceEEEcH
Confidence 999887 44448999999876 6789988 8999999999999999876 57889999999999999
Q ss_pred HHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCC----CCccccccCHHHHHHHHH
Q 006709 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 242 ~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~----~gklI~~ls~~e~~~li~ 317 (634)
+.|+.+|+.|.|||+++++.+..|+.+++|+|.+|++||.+|+||+|+|+|||+|+.. ++++|++++.+|+++++.
T Consensus 149 ~~i~~ll~~g~IPVi~~~~~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~ 228 (279)
T cd04250 149 ELLETLLEAGYIPVIAPVGVGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIA 228 (279)
T ss_pred HHHHHHHHCCCeEEEcCCccCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCCCccccccCCHHHHHHHHH
Confidence 9999999999999999999888999999999999999999999999999999999742 489999999988877753
Q ss_pred hhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccc
Q 006709 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (634)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~ 397 (634)
.+ +.+||
T Consensus 229 ~~------------------------------------------------------------------~~tGg------- 235 (279)
T cd04250 229 DG------------------------------------------------------------------IISGG------- 235 (279)
T ss_pred cC------------------------------------------------------------------CCCCc-------
Confidence 21 23466
Q ss_pred cCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 398 ~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|.+||++|..++++|+.+|+|+||..+++++.++|++++.||+|
T Consensus 236 --m~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 236 --MIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --hHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 99999999999999999999999999999999999999999986
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A |
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-48 Score=412.46 Aligned_cols=438 Identities=42% Similarity=0.587 Sum_probs=385.0
Q ss_pred chHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 79 EDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 79 ~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
...+.+..++|++|||..|+++++||+.+|.++....++.+++++++|+..|.++|||||+++|+++.+++.++++.+.+
T Consensus 74 s~~~~v~~~~e~l~yi~~~~~q~fvV~~~g~~~~t~~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~~~~ie~~y~~ 153 (520)
T KOG2436|consen 74 SSDTTVRILRESLPYITSFRDQKFVVIKSGEAISTSLLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLAERGIEPEYVD 153 (520)
T ss_pred CChhHHHHHHHHHHHHHHhcCceEEEEecccccccchHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHcCCCccccc
Confidence 66889999999999999999999999999998855558999999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHHH-HHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeecc--CCceeeeeecccccCccccccce
Q 006709 159 RYRITDSESLAAAM-EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA--SGNFLAAKRKGVVDGVDYGATGE 235 (634)
Q Consensus 159 G~RvT~~~~l~~~~-~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~--dg~~l~ak~~g~~~g~d~g~~G~ 235 (634)
|+|+|++.+|+++. ..+++.|..++.+ |+++|.. +.+.+.. .++++.+++++++++.+|+++|+
T Consensus 154 ~~RvTda~t~q~~~~~~~~E~n~~lv~n---------L~~~g~~----ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~ge 220 (520)
T KOG2436|consen 154 GYRVTDAHTLQAAKESVSLEANLNLVIN---------LSQLGTR----ARPSSSGVRVGNFFPADRNGVLDGEDYGLVGE 220 (520)
T ss_pred ceecccHHHHHHhhhcchhhhhhHHHHH---------HHHhhce----eccccccccccceeecccccccccceeeeecc
Confidence 99999999999984 4777777666654 6788876 4444433 26799999999999999999999
Q ss_pred EEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeec-ccccCCCCccccccCHHHHHH
Q 006709 236 VKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADS 314 (634)
Q Consensus 236 v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTD-Vdgld~~gklI~~ls~~e~~~ 314 (634)
|.++|.+.|+.+++.|.+|++++++.+++|+++|||+|++|.++|.+|+|+++++++| +.+++++++.++.++.+|...
T Consensus 221 i~~vd~d~i~~l~~~G~mp~L~sla~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~ge~~S~l~l~~e~~ 300 (520)
T KOG2436|consen 221 IKKVDVDRIRHLLDAGSMPLLRSLAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKENGEDISSLILQEEDA 300 (520)
T ss_pred cceechhhhhhhhhCCCchhehhhcccCccceEEeeHHHHhhHHHhccCcceeEEecccccccccCcccccccccchhHh
Confidence 9999999999999999999999999999999999999999999999999999999999 557789999999999999999
Q ss_pred HHHhhchhhhhHHHHHHhhhhccccccCCCCC-CcccccC--CCCCccc-cchhccccCCcccCCCCCCcccccccccCc
Q 006709 315 LIRQRVKQSEIAANYVKAVAEEDITCFGHSDS-IGSVYSS--QNGKTFS-ERRIATFNNGVGFDNGNGLWSSEQGFAIGG 390 (634)
Q Consensus 315 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG 390 (634)
+++...+|+.+|+.++++|.+...+.++.+-+ ++.++.- .....+. .++.++|+++.+++.++++|+..++++.++
T Consensus 301 ~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~gv~~~k~~sl~~~~~~~al~~ 380 (520)
T KOG2436|consen 301 GLRKPSQQKNIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGGVGINKGNSLISQSFKRALDL 380 (520)
T ss_pred hhhhhhhhcccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCceeeecCcccccchhhhhcch
Confidence 99999999999999999999877663443211 1111110 0001111 448899999999999999999999999999
Q ss_pred ccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHH
Q 006709 391 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 470 (634)
Q Consensus 391 ~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~ 470 (634)
+++++|+++.++++.+|...|..+++++|..||+.++.++++.|.+.++||+. .+-|+.++.+..+|+|+|....++..
T Consensus 381 ~~~~~rln~~lse~i~a~~~~~~~i~~~~~~D~~~e~V~~ldkf~~~~~~~~~-~~V~d~ifn~~~~dfp~i~wr~r~~~ 459 (520)
T KOG2436|consen 381 EEYIDRLNGSLSELIAAGDYCGGAIKTYELSDGTNEGVLYLDKFAVSGMGTGS-SDVSDGIFNVMVEDFPEILWRSRPLN 459 (520)
T ss_pred HHHHHHhhchHHHHHHHHHHhccceEEEEccCCCcccceeeeecccCCccccc-chhhHHHHHHHHHhhhhheeeccccc
Confidence 99999999999999999999999999999999999999999999999999988 88899999999999999988888877
Q ss_pred HcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 471 ~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
+......+..+..+.+.+.+++.+.+++++.|+.+++++ +++.+.|.+++|+++.+.+++
T Consensus 460 ~~~~w~f~rs~g~L~~~~~~lfwyg~~~i~~~a~~~~~~-----~v~~~~~~~d~~~s~~n~k~~ 519 (520)
T KOG2436|consen 460 EVNKWYFRRSEGSLRALDFKLFWYGEGQIIKCAALFQFF-----EVAAMSVASDIRPSWQNDKLL 519 (520)
T ss_pred ccceEEEeccHHHHhccCcEEEEecCcHHHHHHHhhhhh-----HHHHhhhccccCccccCCCCC
Confidence 776666667777888889999999999999999999875 688899999999999998876
|
|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=369.85 Aligned_cols=312 Identities=22% Similarity=0.287 Sum_probs=252.1
Q ss_pred CCCcchHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcc
Q 006709 75 YNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEA 154 (634)
Q Consensus 75 g~~~~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~ 154 (634)
|+++|+.+|+++||++.|| +++|||+||+++.+ .++.++++|+.|+..|.++||||||||+++..++++|+++
T Consensus 18 ~~~~e~~~~l~~F~~~~~~------~~~VIKiGG~~l~~-~~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~~gie~ 90 (398)
T PRK04531 18 ASAKEISQYLKRFSQLDAE------RFAVIKVGGAVLRD-DLEALASSLSFLQEVGLTPIVVHGAGPQLDAELDAAGIEK 90 (398)
T ss_pred CChhhhHHHHHHHhCcCCC------cEEEEEEChHHhhc-CHHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHHcCCCc
Confidence 5677778888888888877 99999999999985 4899999999999999999999999999999999999999
Q ss_pred cccCCccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccc
Q 006709 155 KYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATG 234 (634)
Q Consensus 155 ~~~~G~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G 234 (634)
++++|+|+|++++|+++..+.+++|..|++
T Consensus 91 ~~v~G~RVTd~~tl~vv~~~l~~vn~~lv~-------------------------------------------------- 120 (398)
T PRK04531 91 ETVNGLRVTSPEALAIVRKVFQRSNLDLVE-------------------------------------------------- 120 (398)
T ss_pred EEECCEecCCHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999986555677754443
Q ss_pred eEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCH-HHH
Q 006709 235 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTL-QEA 312 (634)
Q Consensus 235 ~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~-~e~ 312 (634)
.|+.+|++|.|||++|++.+.+|+++|+|+|.+|++||.+|+|+||||+||++|+ +.+|++|++++. +++
T Consensus 121 --------~I~~~L~~g~IPVlsplg~~~~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~g~~i~~i~~~~e~ 192 (398)
T PRK04531 121 --------AVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDADGKLISSINLSTEY 192 (398)
T ss_pred --------HHHHHHHCCCEEEEeCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCCCcccCCHHHHH
Confidence 1778899999999999999999999999999999999999999999999999997 468999999997 467
Q ss_pred HHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccc
Q 006709 313 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 392 (634)
Q Consensus 313 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~ 392 (634)
+.++..+ ..+||
T Consensus 193 ~~l~~~~------------------------------------------------------------------~vtgG-- 204 (398)
T PRK04531 193 DHLMQQP------------------------------------------------------------------WINGG-- 204 (398)
T ss_pred HHHHhcC------------------------------------------------------------------CCCcc--
Confidence 7665321 13455
Q ss_pred ccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccc-cccccCccchHHHHHHhHHHHHH
Q 006709 393 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY-EGTRTAKVTDLSGIKQIIQPLVE 471 (634)
Q Consensus 393 ~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Y-e~iR~a~~~D~~~i~~l~~~~~~ 471 (634)
|.+||++|..+++ +++++|+++++.+++|+.|||+++|.||+|.+..- ...+....=|++.+.+++.
T Consensus 205 -------M~~KL~~a~~al~-~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g~~i~~~~~~~~~d~~~l~~ll~---- 272 (398)
T PRK04531 205 -------MKLKLEQIKELLD-RLPLESSVSITSPSDLAKELFTHKGSGTLVRRGERILRATDWDELDLERLNLLIE---- 272 (398)
T ss_pred -------HHHHHHHHHHHHh-CCCcEEEEEecCCCHHHHHHccCCCCCeEEecCCceeeeCChhhcCHHHHHHHHh----
Confidence 9999999999996 46679999999999999999999999999987532 2233333348888888863
Q ss_pred cccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 472 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 472 ~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
..+- +...+.+.+. ...+-+..++..=|++.+.+ .....++..++|.++-||.|+++.++
T Consensus 273 ~sf~-r~~~~~y~~~-~~~~~~y~~~~y~~~Aiv~~--~~~~~~Ldkf~v~~~~~~~~v~d~vf 332 (398)
T PRK04531 273 SSFG-RTLKPDYFDT-TQLLRAYVSENYRAAAILTE--TGGGPYLDKFAVLDDARGEGLGRAVW 332 (398)
T ss_pred hhcc-cchHHHHhcc-CCceEEEEeCCCcEEEEEec--CCCceEeEEEEEccchhhcChHHHHH
Confidence 2221 1122333332 34444444555666666653 34678999999999999999999999
|
|
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=357.16 Aligned_cols=263 Identities=18% Similarity=0.205 Sum_probs=227.9
Q ss_pred hhccCCcccc-CCCCcchHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchH
Q 006709 64 SEAMGGNVEE-TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHV 141 (634)
Q Consensus 64 ~~~~~~~~~~-~g~~~~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~ 141 (634)
|++..+|.++ |++++|.++|.+.|..+.|+- ..+.+|||+||+++.+++ +++++++|++|+..|.++||||||||
T Consensus 2 ~~~~~~~~~~~~~~~~e~~~~l~~f~~~~~~~---~~~f~VIK~GG~~~~~~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 2 YRDVKAFLHQKGGDPREARYWLTQFQIAMPND---WPAFAVLEVDHSVFRSLEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred cchHHHHHHHhCCCHHHHHHHHHHhhccCCCC---CCCEEEEEEChhhhcCchhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5677888899 778999999999999998762 248899999999997655 89999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeee
Q 006709 142 QIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221 (634)
Q Consensus 142 ~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~ 221 (634)
+++..++ +.++.. +-+... ..|..|++. |+++|++ ++++++. ++++++++
T Consensus 79 ~i~~~l~----~~~~~~-----------~~~v~~-~~n~~Lv~~---------L~~~G~~----A~gl~g~-~~~i~a~~ 128 (271)
T cd04236 79 PDGTNMS----DLELQA-----------ARSRLV-KDCKTLVEA---------LQANSAA----AHPLFSG-ESVLQAEE 128 (271)
T ss_pred HHhhhhc----CCcchh-----------eehhHH-HHHHHHHHH---------HHhCCCC----eeeecCc-cceEEEEE
Confidence 9998776 222211 112333 778888886 5788988 8999987 68999887
Q ss_pred cccccCccccccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCC
Q 006709 222 KGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DES 300 (634)
Q Consensus 222 ~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~ 300 (634)
..|++++|+|+.||.+.|+.+|++|+|||++|++++.+|+.+|+|+|.+|++||.+|+|+||||+||++|+ +.+
T Consensus 129 -----~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisplg~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~ 203 (271)
T cd04236 129 -----PEPGASKGPSVSVDTELLQWCLGSGHIPLVCPIGETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK 203 (271)
T ss_pred -----cccCCccceEEEECHHHHHHHHhCCCeEEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC
Confidence 25789999999999999999999999999999999999999999999999999999999999999999997 567
Q ss_pred CccccccCH-HHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCC
Q 006709 301 GHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGL 379 (634)
Q Consensus 301 gklI~~ls~-~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~ 379 (634)
+++|++++. +|++.+++++. +
T Consensus 204 g~lI~~l~~~~e~~~li~~g~-----------------------------i----------------------------- 225 (271)
T cd04236 204 HKVLPQVHLPADLPSLSDAEW-----------------------------L----------------------------- 225 (271)
T ss_pred CCCccccCcHHHHHHHHhCCE-----------------------------E-----------------------------
Confidence 999999995 89999987543 2
Q ss_pred cccccccccCcccccccccCC---HHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 380 WSSEQGFAIGGQERLSRLNGY---LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 380 ~~~~~~~~~GG~~~~~~~~~m---~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+|| | ++|+++|..++..|+. |||++ +++|+.|||++.|.||+|
T Consensus 226 --------~gG---------m~~ki~ki~~~l~~l~~g~s-v~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 226 --------SET---------EQNRIQDIATLLNALPSMSS-AVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred --------cCC---------eeechHHHHHHHHhcccCCe-EEEeC---hHHHHHHHhccCCCCCcC
Confidence 234 7 8999999999999998 99998 788999999999999986
|
Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF). |
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=347.98 Aligned_cols=244 Identities=25% Similarity=0.392 Sum_probs=216.2
Q ss_pred EEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHHH
Q 006709 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 181 (634)
Q Consensus 102 iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~in~~ 181 (634)
.|||+||+++++. +++++++|+.|++.|+++|||||||+|++..++++|++++|++|.|+|++++|+.+..+++++|..
T Consensus 1 ~ViKiGG~~~~~~-l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~g~RvT~~~~l~~v~~al~~vn~~ 79 (248)
T cd04252 1 AVIKVGGAIIEDD-LDELAASLSFLQHVGLYPIVVHGAGPQLNEELEAAGVEPEYVDGLRVTDPETLAVARKVFLEENLK 79 (248)
T ss_pred CEEEEChhhhhcc-HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHcCCCcEeeCCcccCCHHHHHHHHHHHHHHHHH
Confidence 3899999999875 899999999999999999999999999999999999999999999999999999997677899999
Q ss_pred HHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCCcc
Q 006709 182 IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261 (634)
Q Consensus 182 Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~ 261 (634)
+++. |.++|++ ++++++ .++.+++ .++.|+||+|+++.+|.+.|+.+|+.|+|||++|+++
T Consensus 80 iv~~---------l~~~g~~----a~~l~~---~~~~a~~---~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p~~~ 140 (248)
T cd04252 80 LVEA---------LERNGAR----ARPITS---GVFEAEY---LDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAE 140 (248)
T ss_pred HHHH---------HHhCCCC----cccccC---ceEEEEE---CcCccCCccCceeeECHHHHHHHHHCCCeEEECCceE
Confidence 9997 5788987 677763 3557776 3678999999999999999999999999999999999
Q ss_pred CCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHH-HHHHHHHhhchhhhhHHHHHHhhhhcccc
Q 006709 262 SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDIT 339 (634)
Q Consensus 262 ~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~-e~~~li~~~~~~~~~~~~~~~~~~~~~~~ 339 (634)
+++|+.+|+|+|++|++||.+|+|++|+|+||++|+. .++++|++++.. ++++++..+
T Consensus 141 ~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~g~~i~~i~~~~~~~~l~~~~-------------------- 200 (248)
T cd04252 141 TPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQP-------------------- 200 (248)
T ss_pred CCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCCCCcccccCHHHHHHHHHHcC--------------------
Confidence 9999999999999999999999999999999999974 569999999974 676766321
Q ss_pred ccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHc--CCce
Q 006709 340 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR--GVQR 417 (634)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~--Gv~r 417 (634)
..+|| |.+||++|..+.+. |+..
T Consensus 201 ----------------------------------------------~vtgG---------M~~Kl~~~~~~~~~~~~~~~ 225 (248)
T cd04252 201 ----------------------------------------------WVKYG---------TKLKIKEIKELLDTLPRSSS 225 (248)
T ss_pred ----------------------------------------------CcCCc---------hHHHHHHHHHHHHhCCCceE
Confidence 24566 99999998888877 6667
Q ss_pred EEEccCCcchhHHHHHHhhcCCcccc
Q 006709 418 VHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 418 v~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|+|.+ +++|+.|||+++|.||+|
T Consensus 226 v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 226 VSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred EEEEC---CchHHHHHhcCCCCCccC
Confidence 88887 578999999999999985
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th |
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=341.74 Aligned_cols=253 Identities=31% Similarity=0.512 Sum_probs=231.1
Q ss_pred EEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHH-hHHH
Q 006709 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA-GGIR 179 (634)
Q Consensus 102 iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~-G~in 179 (634)
+|||+||+++++++ +.+++++|+.|+..|.++|||||+|++++.+++++++..++.++.|+|+++.++.+..++ |.+|
T Consensus 1 ~ViKlGGs~l~~~~~~~~~~~~i~~l~~~g~~~VlVhG~g~~~~~~~~~~~~~~~~~~~~r~t~~~~l~~~~~a~~g~ln 80 (256)
T cd04238 1 VVIKYGGSAMKDEELKEAFADDIVLLKQVGINPVIVHGGGPEINELLKRLGIESEFVNGLRVTDKETMEIVEMVLAGKVN 80 (256)
T ss_pred CEEEEChHHhcCccHHHHHHHHHHHHHHCCCCEEEECCCcHHHHHHHHHCCCCCEeECCeecCCHHHHHHHHHHHcCchH
Confidence 59999999999887 799999999999999999999999999999999999999999999999999999876555 9999
Q ss_pred HHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCC
Q 006709 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (634)
Q Consensus 180 ~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v 259 (634)
..|++. |+++|++ ++++++.++++++++++| .+++|++|+|+++.++.+.|+.+|++|.|||++|+
T Consensus 81 ~~i~~~---------L~~~Gv~----a~~l~~~~~~~~~~~~~~-~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~~ 146 (256)
T cd04238 81 KELVSL---------LNRAGGK----AVGLSGKDGGLIKAEKKE-EKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPI 146 (256)
T ss_pred HHHHHH---------HHhCCCC----CCCcccccCCEEEEEECC-CCCCCcccccceEEECHHHHHHHHHCCCEEEECCc
Confidence 999876 5788998 899999999999999988 78899999999999999999999999999999999
Q ss_pred ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCC-CCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccc
Q 006709 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (634)
Q Consensus 260 ~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~-~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~ 338 (634)
+++.+|+++|+|+|.+|++||.+|+||+|+|+|||+|+.. ++++|++++.+|+++++..+
T Consensus 147 ~~~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~~------------------- 207 (256)
T cd04238 147 AVDEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDDPGSLISELTPKEAEELIEDG------------------- 207 (256)
T ss_pred EECCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCCCCCccccCCHHHHHHHHHcC-------------------
Confidence 9999999999999999999999999999999999999754 59999999998887775311
Q ss_pred cccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceE
Q 006709 339 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 418 (634)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv 418 (634)
+.+|| |.+|+++|..++++|+.+|
T Consensus 208 -----------------------------------------------~~~gg---------m~~Kl~~a~~~~~~g~~~v 231 (256)
T cd04238 208 -----------------------------------------------VISGG---------MIPKVEAALEALEGGVRKV 231 (256)
T ss_pred -----------------------------------------------CCCCC---------hHHHHHHHHHHHHhCCCEE
Confidence 23456 9999999999999999899
Q ss_pred EEccCCcchhHHHHHHhhcCCcccc
Q 006709 419 HLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 419 ~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+|++|..++.|+.++++.++.||.|
T Consensus 232 ~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 232 HIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred EEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 9999999999999988768899986
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=335.61 Aligned_cols=250 Identities=31% Similarity=0.422 Sum_probs=220.5
Q ss_pred eEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAA 175 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~---G--~RvT~~~~l~~~~~a~ 175 (634)
++|||+||+++.++ .+++++|+.|+..|.++|||||||++++..++++|++++|++ | .|+|++++|+.+..++
T Consensus 1 ~~ViK~GG~~l~~~--~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~g~~~rvt~~~~l~~~~~a~ 78 (268)
T PRK14058 1 MIVVKIGGSVGIDP--EDALIDVASLWADGERVVLVHGGSDEVNELLERLGIEPRFVTSPSGVTSRYTDRETLEVFIMAM 78 (268)
T ss_pred CEEEEEChHHhhCc--HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHHcCCCceEEeCCCCCceEeCCHHHHHHHHHHH
Confidence 58999999999875 578999999999999999999999999999999999999987 6 8999999999987667
Q ss_pred hHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecc----cccC----ccccccceEEEecHHHHHHH
Q 006709 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG----VVDG----VDYGATGEVKKVDVTRMRER 247 (634)
Q Consensus 176 G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g----~~~g----~d~g~~G~v~~vd~~~I~~L 247 (634)
+++|..|++. |+++|++ ++++++.+.++++++++. +.+| .|++|+|+++.++.+.|+.+
T Consensus 79 ~~ln~~lv~~---------L~~~Gv~----a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~l 145 (268)
T PRK14058 79 ALINKQLVER---------LQSLGVN----AVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLL 145 (268)
T ss_pred HHHHHHHHHH---------HHhCCCC----ccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHH
Confidence 7999999986 5788988 899999999888877542 2333 68999999999999999999
Q ss_pred HcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC----CCCccccccCHHHHHHHHHhhchhh
Q 006709 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 248 Ld~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld----~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|++|+|||++|++++.+|+.+|+|+|.+|++||.+|+||+|+|+|||+|+. +++++|++++.+|+++++.
T Consensus 146 l~~g~iPVi~~~~~~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~------ 219 (268)
T PRK14058 146 LKAGYLPVVAPPALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSK------ 219 (268)
T ss_pred HHCCCEEEEeCceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCCCCcCccCcCHHHHHHHhh------
Confidence 999999999999888889999999999999999999999999999999974 3488999999888776542
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
+++|| |.+|
T Consensus 220 --------------------------------------------------------------~~tGg---------M~~K 228 (268)
T PRK14058 220 --------------------------------------------------------------AAGGG---------MKKK 228 (268)
T ss_pred --------------------------------------------------------------ccCCc---------cHHH
Confidence 13455 9999
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|++|..|++.|++++||+||+.++.|+.++ +|.||.|.+
T Consensus 229 l~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l---~G~GT~I~~ 267 (268)
T PRK14058 229 VLMAAEAVEGGVGRVIIADANVDDPISAAL---AGEGTVIVN 267 (268)
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcchHHHHh---CCCceEEec
Confidence 999999999999999999999999877665 456999864
|
|
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=329.65 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=222.7
Q ss_pred EEEEECCccCCCCC-hHHHHHHHHHHH-hCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH-HHhHH
Q 006709 102 FVVIISGEIVSSPY-LDPILKDIAFLH-HLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME-AAGGI 178 (634)
Q Consensus 102 iVIKLGGsvL~~~~-l~~la~dIa~L~-~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~-a~G~i 178 (634)
+|||+||+++++++ +++++++|+.+. ..|.++|||||||++++.+++++++++++.+|+|+|+.+.++.+.. +.+++
T Consensus 1 ~ViK~GGs~l~~~~~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~~~~ 80 (252)
T cd04249 1 LVIKLGGALLETEAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTA 80 (252)
T ss_pred CEEEEChHHhcChhhHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCCEEECCEecCCHHHHHHHHHHHcCcc
Confidence 59999999998876 889999999875 4678999999999999999999999999999999999999999854 45899
Q ss_pred HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcC
Q 006709 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (634)
Q Consensus 179 n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~ 258 (634)
|..+++. +.++|++ ++++++.|++++++++.+ .|++++|+++.+|.+.|+.+|+.|+|||+++
T Consensus 81 n~~lv~~---------l~~~Gv~----a~~l~~~~~~~~~~~~~~----~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~ 143 (252)
T cd04249 81 NKQLMAQ---------AIKAGLK----PVGLSLADGGMTAVTQLD----PELGAVGKATANDPSLLNDLLKAGFLPIISS 143 (252)
T ss_pred cHHHHHH---------HHhCCCC----ceeeeccCCCEEEEEEcC----CCCCcccceEEEcHHHHHHHHHCCCEEEECC
Confidence 9999987 3588988 899999999999999864 5899999999999999999999999999999
Q ss_pred CccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhcc
Q 006709 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 337 (634)
Q Consensus 259 v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~ 337 (634)
++.+.+|+++|+|+|.+|+++|.+|+|| +||+|||+|+. .++++|++++.+|+++++..+
T Consensus 144 ~g~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g------------------ 204 (252)
T cd04249 144 IGADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQG------------------ 204 (252)
T ss_pred CEECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcC------------------
Confidence 9999999999999999999999999999 78999999974 578999999998888876421
Q ss_pred ccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCce
Q 006709 338 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 417 (634)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~r 417 (634)
..+|| |.+|+++|..+++.|+.+
T Consensus 205 ------------------------------------------------~~~gG---------m~~kl~~a~~~~~~~~~~ 227 (252)
T cd04249 205 ------------------------------------------------VITDG---------MIVKVNAALDAAQSLRRG 227 (252)
T ss_pred ------------------------------------------------CCcCC---------cHHHHHHHHHHHHhCCCe
Confidence 13456 999999999999999888
Q ss_pred EEEccCCcchhHHHHHHhhcCCcccc
Q 006709 418 VHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 418 v~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+||++|+.++. |.++|++++.||+|
T Consensus 228 v~I~~g~~~~~-l~~~l~g~~~GT~I 252 (252)
T cd04249 228 IDIASWQYPEQ-LTALLAGEPVGTKI 252 (252)
T ss_pred EEEEeCCCccH-HHHHHcCCCCCcCC
Confidence 99999998885 78999999999986
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). |
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=329.39 Aligned_cols=244 Identities=34% Similarity=0.467 Sum_probs=216.1
Q ss_pred EEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC---C--ccCCCHHHHHHHHHHHh
Q 006709 102 FVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG---R--YRITDSESLAAAMEAAG 176 (634)
Q Consensus 102 iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~---G--~RvT~~~~l~~~~~a~G 176 (634)
+|||+||+++++ +++++++|+.| |.++|||||||++++..+++++++++|++ | .|+|++++|+.+..+++
T Consensus 1 ~VIKlGGs~l~~--~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~~~gi~~~~~~~~~G~~~Rvt~~~~l~~~~~a~~ 75 (257)
T cd04251 1 IVVKIGGSVVSD--LDKVIDDIANF---GERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETLEVFVMVMG 75 (257)
T ss_pred CEEEEChHHhhC--hHHHHHHHHHc---CCCEEEECCCHHHHHHHHHHcCCCcEEEeCCCCCccccCCHHHHHHHHHHHH
Confidence 599999999985 67899999988 89999999999999999999999999985 7 49999999999976669
Q ss_pred HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeec--------ccccCccccccceEEEecHHHHHHHH
Q 006709 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 177 ~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~--------g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
++|..|++. |+++|++ ++++++.+.+++++++. +.....|++|+|+++.+|.+.|+.+|
T Consensus 76 ~ln~~iv~~---------L~~~Gi~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll 142 (257)
T cd04251 76 LINKKIVAR---------LHSLGVK----AVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALL 142 (257)
T ss_pred HHHHHHHHH---------HHhCCCC----ceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHH
Confidence 999999996 5788988 89999999999988865 22233588999999999999999999
Q ss_pred cCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCCCCccccccCHHHHHHHHHhhchhhhhHHH
Q 006709 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (634)
Q Consensus 249 d~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~~gklI~~ls~~e~~~li~~~~~~~~~~~~ 328 (634)
++|+|||++|++++.+|+.+|+|+|.+|++||.+|+||+|+|+||++|+..++++|++++.+|+++++..
T Consensus 143 ~~g~vpVi~~~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~~~~i~~i~~~e~~~l~~~---------- 212 (257)
T cd04251 143 DAGYLPVVSPVAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK---------- 212 (257)
T ss_pred hCCCeEEEeCcEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeCCcccCccCHHHHHHHHhh----------
Confidence 9999999999999999999999999999999999999999999999998777999999999888877521
Q ss_pred HHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHH
Q 006709 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (634)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~ 408 (634)
++|| |.+||++|.
T Consensus 213 ----------------------------------------------------------~~gg---------m~~Kl~aa~ 225 (257)
T cd04251 213 ----------------------------------------------------------AGGG---------MKRKLLAAA 225 (257)
T ss_pred ----------------------------------------------------------CCCc---------hHHHHHHHH
Confidence 2345 999999999
Q ss_pred HHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 409 ~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
.+++.|+.++||+||+.++. +..++. |.||.|
T Consensus 226 ~a~~~gv~~v~i~~g~~~~~-l~~~l~--g~gT~i 257 (257)
T cd04251 226 EAVEGGVREVVIGDARADSP-ISSALN--GGGTVI 257 (257)
T ss_pred HHHHcCCCEEEEecCCCccH-HHHHHc--CCCcCC
Confidence 99999999999999999987 445554 468875
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). |
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=335.15 Aligned_cols=259 Identities=17% Similarity=0.218 Sum_probs=214.0
Q ss_pred CeEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
|++|||+||+++.++. +..+++||++|+..|+++||||||||||+.++.++++.++| .|.|+|+.+
T Consensus 3 k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~~~~~~~~-~g~rvt~~~-- 79 (316)
T PRK12352 3 ELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHER-EGLPLTPLA-- 79 (316)
T ss_pred cEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHcCccccc-CCCCCCCHH--
Confidence 7999999999997632 58899999999999999999999999999999999999998 699999997
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCc---ceeEEeeccCCcee-eeeecccc-----------cCcccccc
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR---WHEVGVSVASGNFL-AAKRKGVV-----------DGVDYGAT 233 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~---~~av~l~~~dg~~l-~ak~~g~~-----------~g~d~g~~ 233 (634)
..+.+++|.+.+++.++|++ .|.++|.+.. +.++++++.|++|+ .+||.|++ +++|++|+
T Consensus 80 ~~v~~~~g~i~~~i~~~L~~-----~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~ 154 (316)
T PRK12352 80 NCVADTQGGIGYLIQQALNN-----RLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFV 154 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEe
Confidence 44456777777777777653 6788883311 11478899999999 57888876 56688884
Q ss_pred ce--------------EEEecHHHHHHHHcCCcEEEEc-----CCccCCCCc----eeeechHHHHHHHHHHcCCCEEEE
Q 006709 234 GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSGE----VLNCNTYEVATACALAIEADKLIC 290 (634)
Q Consensus 234 G~--------------v~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~Ge----i~nid~D~lAa~LA~aL~AdkLI~ 290 (634)
+. |+.||.+.|+.||++|+|||++ |++.+.+|+ .+|||+|.+|+++|.+|+||+|||
T Consensus 155 ~d~g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~ 234 (316)
T PRK12352 155 EDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVI 234 (316)
T ss_pred ecCCCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEE
Confidence 44 9999999999999999997776 777665555 556999999999999999999999
Q ss_pred eecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhc
Q 006709 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (634)
Q Consensus 291 LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (634)
|||++|+. +++++|++++..|+++++.++.
T Consensus 235 LTDV~GV~~d~~~~~~~li~~lt~~e~~~li~~g~--------------------------------------------- 269 (316)
T PRK12352 235 TTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGH--------------------------------------------- 269 (316)
T ss_pred EeCchhhccCCCCCCcccccccCHHHHHHHHhcCC---------------------------------------------
Confidence 99999873 4578999999999999875421
Q ss_pred cccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 366 ~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|..|| |.+||++|..|++.|+.+|||++ ++. +.++|+++ .||.|..
T Consensus 270 --------------------i~~Gg---------M~pKl~aA~~al~~Gv~~v~I~~---~~~-i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 270 --------------------FPPGS---------MLPKIIASLTFLEQGGKEVIITT---PEC-LPAALRGE-TGTHIIK 315 (316)
T ss_pred --------------------cCCCC---------CHHHHHHHHHHHHhCCCeEEEcc---hHH-HHHHHcCC-CCeEEEe
Confidence 22355 99999999999999999999997 444 66778765 8999853
|
|
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=311.59 Aligned_cols=228 Identities=32% Similarity=0.507 Sum_probs=205.7
Q ss_pred eEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHhHHH
Q 006709 101 TFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIR 179 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a~G~in 179 (634)
++|||+||++++++ +.+++++|+.|+..|.++|||||||++++.++++++++.++.+|.|+|++++++.+ ++.+|++|
T Consensus 1 ~~ViK~GGs~l~~~-~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~~~~~~~~~~g~~~ 79 (231)
T TIGR00761 1 TIVIKIGGAAISDL-LEAFASDIAFLRAVGIKPVIVHGGGPEINELLEALGIPPEFKNGLRVTDKETLEVVEMVLIGQVN 79 (231)
T ss_pred CEEEEEChHHHhcc-HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHHHHcCCCCEecCCCccCCHHHHHHHHHHHhcchH
Confidence 68999999999887 99999999999999999999999999999999999999899999999999999887 45577999
Q ss_pred HHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCC
Q 006709 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (634)
Q Consensus 180 ~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v 259 (634)
..+++. |+++|++ ++++++.+++++++++. ++.|++++|+++.++.+.|+.+|++|+|||++|+
T Consensus 80 ~~i~~~---------L~~~G~~----a~~l~~~~~~~it~~~~---~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~~ 143 (231)
T TIGR00761 80 KELVAL---------LNKHGIN----AIGLTGGDGQLFTARSL---DKEDLGYVGEIKKVNKALLEALLKAGYIPVISSL 143 (231)
T ss_pred HHHHHH---------HHhCCCC----cccccCCCCCEEEEEEC---CCccCCcccceEEEcHHHHHHHHHCCCeEEECCC
Confidence 999886 6788998 89999999999999865 4468999999999999999999999999999999
Q ss_pred ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CC-CccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhcc
Q 006709 260 GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ES-GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEED 337 (634)
Q Consensus 260 ~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~-gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~ 337 (634)
+.+.+|+++|+|+|.+|++||.+|+||+|+|+||+||+. .+ +++|++++.+|+++++..+
T Consensus 144 ~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~~~~i~~i~~~e~~~l~~~~------------------ 205 (231)
T TIGR00761 144 ALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLEEIEQLIEQG------------------ 205 (231)
T ss_pred ccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCCCeeccccCHHHHHHHHHcC------------------
Confidence 999899999999999999999999999999999999974 33 4599999998888876321
Q ss_pred ccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCce
Q 006709 338 ITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQR 417 (634)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~r 417 (634)
..+|| |.+||++|..|++.|+++
T Consensus 206 ------------------------------------------------~~tgg---------m~~Kl~~a~~a~~~gv~~ 228 (231)
T TIGR00761 206 ------------------------------------------------IITGG---------MIPKVNAALEALRGGVKS 228 (231)
T ss_pred ------------------------------------------------CCCCc---------hHHHHHHHHHHHHcCCCE
Confidence 24566 999999999999999999
Q ss_pred EEE
Q 006709 418 VHL 420 (634)
Q Consensus 418 v~I 420 (634)
+||
T Consensus 229 v~i 231 (231)
T TIGR00761 229 VHI 231 (231)
T ss_pred EEC
Confidence 986
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model. |
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=289.05 Aligned_cols=238 Identities=18% Similarity=0.240 Sum_probs=198.1
Q ss_pred eEEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
++||||||++|++++ +++++++|+.++ |.++|||||||++++..++++|+++ |.|++++..|..+
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~~~~~~~~~g~~~----g~~~~~~~~l~~~ 74 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSFGHPKAKEYGLPD----GDGSFSAEGVAET 74 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcccCHHHHHhCCCc----CCCchhhhhHHHH
Confidence 489999999998753 456677777665 9999999999999999999999976 7789999999988
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G 251 (634)
..+++++|..++++ |.++|++ ++++++.+. +.+. .|++..++.+.|+.+|+.|
T Consensus 75 ~~~~~~ln~~~~~~---------l~~~g~~----a~~l~~~~~--~~~~------------~g~~~~~~~~~l~~ll~~g 127 (252)
T cd04241 75 HEAMLELNSIVVDA---------LLEAGVP----AVSVPPSSF--FVTE------------NGRIVSFDLEVIKELLDRG 127 (252)
T ss_pred HHHHHHHHHHHHHH---------HHHCCCC----eEEEChHHe--EEec------------CCeeeeecHHHHHHHHhCC
Confidence 77778999888886 5788988 777777663 2221 4788899999999999999
Q ss_pred cEEEEcCC-ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-C---CCccccccCHHHHHHHHHhhchhhhhH
Q 006709 252 CLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-E---SGHLIRFLTLQEADSLIRQRVKQSEIA 326 (634)
Q Consensus 252 ~IPVv~~v-~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~---~gklI~~ls~~e~~~li~~~~~~~~~~ 326 (634)
+|||+++. +.+..++.+|+|+|.+|+++|.+|+||+|+|+|||||+. . ++++|++++.+++++++....
T Consensus 128 ~iPVi~~~~~~~~~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P~~~~~i~~i~~~~~~~~~~~~~------ 201 (252)
T cd04241 128 FVPVLHGDVVLDEGGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPPPDAKLIPEIDVGSLEDILAALG------ 201 (252)
T ss_pred CEEEEcCCeEecCCCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCeEcceeCccchHHHHHhcC------
Confidence 99999874 467778899999999999999999999999999999974 2 699999999988877764200
Q ss_pred HHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHH
Q 006709 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 406 (634)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~A 406 (634)
++ .++.+|| |.+||++
T Consensus 202 ------------------------------------------------~~-------~~~~tGG---------m~~Kl~a 217 (252)
T cd04241 202 ------------------------------------------------SA-------GTDVTGG---------MAGKIEE 217 (252)
T ss_pred ------------------------------------------------cC-------CccccCC---------HHHHHHH
Confidence 00 0135677 9999999
Q ss_pred HHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 407 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 407 A~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|..++++|++ +||+||..++. +.++++++..||.|
T Consensus 218 a~~a~~~Gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i 252 (252)
T cd04241 218 LLELARRGIE-VYIFNGDKPEN-LYRALLGNFIGTRI 252 (252)
T ss_pred HHHHHhcCCe-EEEEeCCCHHH-HHHHHcCCCCceEC
Confidence 9999999997 99999999876 67888888899975
|
Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-31 Score=276.35 Aligned_cols=261 Identities=19% Similarity=0.222 Sum_probs=192.4
Q ss_pred cCCeEEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+++++||||||++|++++ +..++++|+.|++.|+++|||||||+|++..+...+..+.+.. ++++....
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~~~~~~--~~~~~~~~ 78 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAAASEKN--KVPAMPLD 78 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccccccCC--CCCCchhH
Confidence 468999999999999865 6899999999999999999999999999887666555433221 45655444
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCce-eeeeecccc------------cCcccc
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNF-LAAKRKGVV------------DGVDYG 231 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~-l~ak~~g~~------------~g~d~g 231 (634)
..+...+|.+.+.++.+|++ .|.++|++.+.. .+-++..|..| ..++|.|++ +|.||.
T Consensus 79 ~~~a~~qg~l~~~l~~~~~~-----~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~ 153 (314)
T PRK12353 79 VCGAMSQGYIGYHLQNALRN-----ELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFK 153 (314)
T ss_pred HHHHHHhHHHHHHHHHHHHH-----HHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceee
Confidence 44467888888888888753 788888753322 22334444446 556777765 455555
Q ss_pred c-cce-EEE----------ecHHHHHHHHcCCcEEEEcCCccC----CCCce----eeechHHHHHHHHHHcCCCEEEEe
Q 006709 232 A-TGE-VKK----------VDVTRMRERLDGGCLVILSNLGYS----SSGEV----LNCNTYEVATACALAIEADKLICI 291 (634)
Q Consensus 232 ~-~G~-v~~----------vd~~~I~~LLd~G~IPVv~~v~~~----~~Gei----~nid~D~lAa~LA~aL~AdkLI~L 291 (634)
+ +++ .+. +|.+.|+.||++|+|||+++.+.. .++.+ .|+|+|.+|+++|.+|+||+|||+
T Consensus 154 ~~~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~l 233 (314)
T PRK12353 154 EDAGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIIL 233 (314)
T ss_pred ecCCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEE
Confidence 5 332 333 789999999999999999965322 22222 369999999999999999999999
Q ss_pred ecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhcc
Q 006709 292 IDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIAT 366 (634)
Q Consensus 292 TDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (634)
|||||++ +++++|++++.++++.++..+.
T Consensus 234 TdvdGVy~~~~~~~a~~i~~i~~~e~~~~~~~~~---------------------------------------------- 267 (314)
T PRK12353 234 TAVDKVYINFGKPNQKKLDEVTVSEAEKYIEEGQ---------------------------------------------- 267 (314)
T ss_pred eCCccccCCCCCCCCeECcCcCHHHHHHHHhcCC----------------------------------------------
Confidence 9999973 3589999999888877753211
Q ss_pred ccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHH-HcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 367 FNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 367 ~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~-~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+.+|| |.+||++|..++ +.+...|+|++ ++. +.+++.++ .||.|.
T Consensus 268 -------------------~~tGG---------M~~Kl~aA~~a~~~~~g~~v~I~~---~~~-i~~~l~g~-~GT~i~ 313 (314)
T PRK12353 268 -------------------FAPGS---------MLPKVEAAISFVESRPGRKAIITS---LEK-AKEALEGK-AGTVIV 313 (314)
T ss_pred -------------------cCCCC---------cHHHHHHHHHHHHHcCCCEEEECC---chH-HHHHhCCC-CCeEec
Confidence 23456 999999999999 44444589997 344 45666665 899985
|
|
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=277.28 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=196.0
Q ss_pred CCeEEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHH-HcCCcccccCCccCCCHHHH
Q 006709 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~-~lg~~~~~~~G~RvT~~~~l 168 (634)
++++|||+|||+|.++. .+..+++|+.|.+.|+++|||||+|||++..+. ..+.... ..++.+|
T Consensus 2 ~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~~~~~------~~~~~pl 75 (312)
T PRK12686 2 KEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAESNSN------KVPAMPL 75 (312)
T ss_pred CCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHhcccc------CCCCCCh
Confidence 68999999999998754 478999999999999999999999999995544 4444432 1466778
Q ss_pred HHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceee-eeecccc------------c----
Q 006709 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV------------D---- 226 (634)
Q Consensus 169 ~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~-ak~~g~~------------~---- 226 (634)
+++ .+++|.+.++|+++|.+ .|.++++..++. .+-++..|..|.. .|+.|+. .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~-----~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~ 150 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNN-----ELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTF 150 (312)
T ss_pred hhhhhhccchhhHHHHHHHHH-----HHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcc
Confidence 886 68999999999999864 788888776544 3456677777776 3455541 1
Q ss_pred Ccc--ccccceEEE------ecHHHHHHHHcCCcEEEEc-----CCccCCCCce----eeechHHHHHHHHHHcCCCEEE
Q 006709 227 GVD--YGATGEVKK------VDVTRMRERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLI 289 (634)
Q Consensus 227 g~d--~g~~G~v~~------vd~~~I~~LLd~G~IPVv~-----~v~~~~~Gei----~nid~D~lAa~LA~aL~AdkLI 289 (634)
..| .||.+.|.+ ++.+.|+.||++|+|||.+ |+..+ ++.+ .++|+|.+|++||.+|+||+||
T Consensus 151 ~~d~~~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~-~~~~~gv~avid~D~~Aa~LA~~L~Ad~LI 229 (312)
T PRK12686 151 KEDAGRGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRD-DNTLKGVEAVIDKDFASEKLAEQIDADLLI 229 (312)
T ss_pred cccCCCCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEec-CCcEEeeecccCccHHHHHHHHHcCCCEEE
Confidence 123 388888866 9999999999999999876 44333 3333 3789999999999999999999
Q ss_pred EeecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchh
Q 006709 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (634)
Q Consensus 290 ~LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (634)
|||||+|++ +++++|++++.+|++.++.++
T Consensus 230 iLTDVdGVy~~~~~p~ak~I~~I~~~e~~~li~~g--------------------------------------------- 264 (312)
T PRK12686 230 ILTGVENVFINFNKPNQQKLDDITVAEAKQYIAEG--------------------------------------------- 264 (312)
T ss_pred EEeCchhhccCCCCCCCeECCccCHHHHHHHhhCC---------------------------------------------
Confidence 999999973 468999999999888876431
Q ss_pred ccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCC-ceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGV-QRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 365 ~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv-~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
.|++|| |.+|++||..+++.|+ .+++|.+ .+. +.+++.++ .||.|
T Consensus 265 --------------------~~~tGG---------M~pKveAA~~av~~g~g~~viI~~---~~~-i~~aL~G~-~GT~I 310 (312)
T PRK12686 265 --------------------QFAPGS---------MLPKVEAAIDFVESGEGKKAIITS---LEQ-AKEALAGN-AGTHI 310 (312)
T ss_pred --------------------CccCCC---------cHHHHHHHHHHHHhCCCCEEEEeC---chH-HHHHhCCC-CCeEE
Confidence 145677 9999999999998764 4567776 333 44666554 89988
Q ss_pred c
Q 006709 444 A 444 (634)
Q Consensus 444 ~ 444 (634)
.
T Consensus 311 ~ 311 (312)
T PRK12686 311 T 311 (312)
T ss_pred e
Confidence 4
|
|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=274.83 Aligned_cols=258 Identities=21% Similarity=0.228 Sum_probs=200.8
Q ss_pred CCeEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 006709 99 GGTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~ 167 (634)
++++||+|||++|..+. ++..+++|+.|.+.|+++|||||+|||++.++.+....... -+++.+
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~~-----~~~~~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKDV-----GIPPFP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhccc-----CCCCCc
Confidence 47999999999997632 56789999999999999999999999999887765433210 135566
Q ss_pred HHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceee-eeeccccc------------C--
Q 006709 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVVD------------G-- 227 (634)
Q Consensus 168 l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~-ak~~g~~~------------g-- 227 (634)
|+.+ .+++|.+.+.|+.+|.+ .|.++|++.++. .+.|+..|+.|.. .||.|+.- +
T Consensus 77 ld~~~a~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~ 151 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRN-----ELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWI 151 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHH-----HHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCE
Confidence 7776 67999999999999864 799999887655 3567777887877 45666520 0
Q ss_pred ----ccccccce------EEEecHHHHHHHHcCCcEEEEcCCc----cCCCCceee----echHHHHHHHHHHcCCCEEE
Q 006709 228 ----VDYGATGE------VKKVDVTRMRERLDGGCLVILSNLG----YSSSGEVLN----CNTYEVATACALAIEADKLI 289 (634)
Q Consensus 228 ----~d~g~~G~------v~~vd~~~I~~LLd~G~IPVv~~v~----~~~~Gei~n----id~D~lAa~LA~aL~AdkLI 289 (634)
...||... ++.+|.+.|+.||++|.|||+++.+ ++.+|++++ +|+|.+|++||.+|+||+||
T Consensus 152 ~~~d~g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LI 231 (313)
T PRK12454 152 VKEDAGRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFI 231 (313)
T ss_pred EEEcCCCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEE
Confidence 12233332 3689999999999999999999543 556666665 58899999999999999999
Q ss_pred EeecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchh
Q 006709 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (634)
Q Consensus 290 ~LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (634)
|||||+|+. +++++|++++.+|+++++.++
T Consensus 232 iLTdVdGVy~~~~~p~~~~i~~It~~e~~~~i~~g--------------------------------------------- 266 (313)
T PRK12454 232 ILTDVEKVYLNYGKPDQKPLDKVTVEEAKKYYEEG--------------------------------------------- 266 (313)
T ss_pred EEeCCceeeCCCCCCCCeEccccCHHHHHHHHhcC---------------------------------------------
Confidence 999999873 578999999999988887431
Q ss_pred ccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 365 ~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
.|++|| |.+||+||..+++.|+.+++|.+. +. +.+++.++ .||.|.
T Consensus 267 --------------------~~~~Gg---------M~pKv~AA~~~v~~gg~~a~I~~~---~~-i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 267 --------------------HFKAGS---------MGPKILAAIRFVENGGKRAIIASL---EK-AVEALEGK-TGTRII 312 (313)
T ss_pred --------------------CcCCCC---------hHHHHHHHHHHHHcCCCeEEECch---HH-HHHHHCCC-CCeEeC
Confidence 145567 999999999999999889999863 33 55666555 899985
Q ss_pred c
Q 006709 445 S 445 (634)
Q Consensus 445 ~ 445 (634)
+
T Consensus 313 ~ 313 (313)
T PRK12454 313 P 313 (313)
T ss_pred C
Confidence 3
|
|
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=275.76 Aligned_cols=239 Identities=21% Similarity=0.290 Sum_probs=189.9
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
.+++|||+|+|+|+++. ++.++++|+.|++.|++||||++| +|..++..+|++. |.++....|++
T Consensus 6 ~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSG--AiaaG~~~Lg~~~------rp~~l~~kQA~ 77 (369)
T COG0263 6 ARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSG--AIAAGRTRLGLPK------RPKTLAEKQAA 77 (369)
T ss_pred ceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccc--hhhhChhhcCCCC------CCcchHHHHHH
Confidence 47999999999999874 789999999999999999999999 7888889999986 45555555554
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH-HHHHHHHcC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDG 250 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~-~~I~~LLd~ 250 (634)
+++||.. |++.|+ +.|.+||+. ..++..+-.+|.. +.+..|. ++|..||+.
T Consensus 78 -AAVGQ~~--Lm~~y~-----~~f~~~g~~----v~QiLLTr~D~~~----------------r~ry~Nar~Tl~~Ll~~ 129 (369)
T COG0263 78 -AAVGQVR--LMQLYE-----ELFARYGIK----VGQILLTRDDFSD----------------RRRYLNARNTLSALLEL 129 (369)
T ss_pred -HHhCHHH--HHHHHH-----HHHHhcCCe----eeEEEeehhhhhh----------------HHHHHHHHHHHHHHHHC
Confidence 6788876 777775 379999987 2333222222222 1234454 999999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-------CCCCccccccCHH--HHHHHHHhhch
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-------DESGHLIRFLTLQ--EADSLIRQRVK 321 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-------d~~gklI~~ls~~--e~~~li~~~~~ 321 (634)
|.|||||+++..+..|+.+.|||.+|+.+|..++||.|++|||+||+ +|++++|++++.. |++.+
T Consensus 130 gvVPIINENDtva~~EikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~~~------ 203 (369)
T COG0263 130 GVVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIEAM------ 203 (369)
T ss_pred CceeeecCCCceeeeeeeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHHHH------
Confidence 99999999999999999999999999999999999999999999998 3678898888632 33322
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
+ + +.++. +.||| |.
T Consensus 204 ------------a-----------------g---------------gsgs~-------------~GTGG---------M~ 217 (369)
T COG0263 204 ------------A-----------------G---------------GSGSE-------------LGTGG---------MR 217 (369)
T ss_pred ------------h-----------------c---------------CCCCC-------------CCccc---------HH
Confidence 1 1 01222 45677 99
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~ 447 (634)
+||.||..|+++|++ +.|.+|..++. +.+++.+...||.|.+..
T Consensus 218 TKl~AA~iA~~aG~~-~iI~~g~~~~~-i~~~~~~~~~GT~F~~~~ 261 (369)
T COG0263 218 TKLEAAKIATRAGVP-VIIASGSKPDV-ILDALEGEAVGTLFEPQA 261 (369)
T ss_pred HHHHHHHHHHHcCCc-EEEecCCCcch-HHHHHhCCCCccEEecCC
Confidence 999999999999998 89999999986 667788889999998653
|
|
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=267.15 Aligned_cols=237 Identities=30% Similarity=0.399 Sum_probs=204.4
Q ss_pred EEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHHHHH
Q 006709 103 VVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMM 181 (634)
Q Consensus 103 VIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~in~~ 181 (634)
||||||+++++++ +++++++|+.+++.|+++|||||||++++..+.+++....+..+.++++.+.+..+....+..+..
T Consensus 1 ViKiGGs~l~~~~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T cd02115 1 VIKFGGSSVSSEERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMGEGMSNLL 80 (248)
T ss_pred CEeeCccccCCHHHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHHHhhhhhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 7999999998854 899999999999899999999999999999999998877777788988888877776666777777
Q ss_pred HHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCCcc
Q 006709 182 IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGY 261 (634)
Q Consensus 182 Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~ 261 (634)
+++. |+++|++ +..+++.+..+... +++++|.+..++.+.|+++|+.|.|||+++++.
T Consensus 81 ~~~~---------l~~~gi~----a~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~ 138 (248)
T cd02115 81 IAAA---------LEQHGIK----AVPLDLTQAGFASP---------NQGHVGKITKVSTDRLKSLLENGILPILSGFGG 138 (248)
T ss_pred HHHH---------HHhCCCC----eEEEchHHcCeEeC---------CCCCcccceeeCHHHHHHHHhCCcEEEecCeEe
Confidence 7775 6788988 78887777655432 568889999999999999999999999999876
Q ss_pred CC---CCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHHHHHH
Q 006709 262 SS---SGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 331 (634)
Q Consensus 262 ~~---~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~ 331 (634)
.+ .+++.++++|.+|+.+|.+|+||+|+|+|||+|+. +++++|++++.+|++++...
T Consensus 139 ~~~~~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~------------- 205 (248)
T cd02115 139 TDEKETGTLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYA------------- 205 (248)
T ss_pred ccCCceeeecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHc-------------
Confidence 55 67889999999999999999999999999999972 24999999999888877531
Q ss_pred hhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHH
Q 006709 332 AVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 411 (634)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~ 411 (634)
|+ |..|++++..+.
T Consensus 206 ---------------------------------------------------------g~---------~~~k~~a~~~~~ 219 (248)
T cd02115 206 ---------------------------------------------------------GA---------MVLKPKAADPAA 219 (248)
T ss_pred ---------------------------------------------------------CC---------CccCHHHHHHHH
Confidence 12 888999999999
Q ss_pred HcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 412 ~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+.|+ +++|+++..++.| ++|++++.||+|
T Consensus 220 ~~~~-~v~I~~~~~~~~l--~~~~~~~~GT~I 248 (248)
T cd02115 220 RAGI-PVRIANTENPGAL--ALFTPDGGGTLI 248 (248)
T ss_pred HcCC-cEEEEeCCCcccc--cccCCCCCCCCC
Confidence 9996 5999999999885 999999999986
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. |
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=265.25 Aligned_cols=255 Identities=19% Similarity=0.202 Sum_probs=186.2
Q ss_pred CeEEEEECCccCCCC------C-----hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 100 GTFVVIISGEIVSSP------Y-----LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 100 k~iVIKLGGsvL~~~------~-----l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
|+||||+|||+|..+ + ++.++++|+.|.+.|++||||||||||++.........+ ..++...|
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~------~~~~~~p~ 74 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD------SEVPAMPL 74 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc------ccCCCCcc
Confidence 689999999999842 1 578999999999999999999999999987654332211 12344457
Q ss_pred HHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceeeee-ecccc-----------------
Q 006709 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLAAK-RKGVV----------------- 225 (634)
Q Consensus 169 ~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~ak-~~g~~----------------- 225 (634)
+++ .+.+|.+.+.+..+|++ .|.++|++.++. ++.++..|..|-... +.|+.
T Consensus 75 ~~~~A~~qg~lg~~~~~~l~~-----~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~ 149 (310)
T TIGR00746 75 DVLGAMSQGMIGYMLQQALNN-----ELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIV 149 (310)
T ss_pred hHHHHhhHHHHHHHHHHHHHH-----HHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeE
Confidence 775 67899999999888753 577888765444 456666666666533 33321
Q ss_pred -cCccccccce------EEEecHHHHHHHHcCCcEEEEcCCcc----CCC----CceeeechHHHHHHHHHHcCCCEEEE
Q 006709 226 -DGVDYGATGE------VKKVDVTRMRERLDGGCLVILSNLGY----SSS----GEVLNCNTYEVATACALAIEADKLIC 290 (634)
Q Consensus 226 -~g~d~g~~G~------v~~vd~~~I~~LLd~G~IPVv~~v~~----~~~----Gei~nid~D~lAa~LA~aL~AdkLI~ 290 (634)
+...+||... ++.++.++|+.||++|.|+|.++-+. ..+ |...|+|+|.+|+++|.+|+||+|||
T Consensus 150 ~~d~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~LIi 229 (310)
T TIGR00746 150 KEDAGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADILVI 229 (310)
T ss_pred eecCCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEEEE
Confidence 0012333332 24789999999999998544442211 122 33458999999999999999999999
Q ss_pred eecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhc
Q 006709 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (634)
Q Consensus 291 LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (634)
||||||++ +++++|++++.+|++.++..+
T Consensus 230 LTDVdGVy~~~~~p~a~~i~~it~~e~~~~~~~g---------------------------------------------- 263 (310)
T TIGR00746 230 LTDVDAVYINYGKPDEKALREVTVEELEDYYKAG---------------------------------------------- 263 (310)
T ss_pred EeCCCceeCCCCCCCCcCCcCcCHHHHHHHHhcC----------------------------------------------
Confidence 99999973 568999999998887775321
Q ss_pred cccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 366 ~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
.|.+|| |.+||+||..+++.|+.+++|++ .+. +.+++.++ .||.|.
T Consensus 264 -------------------~~~tGg---------M~~Kl~AA~~~~~~g~~~v~I~~---~~~-i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 264 -------------------HFAAGS---------MGPKVEAAIEFVESGGKRAIITS---LEN-AVEALEGK-AGTRVT 309 (310)
T ss_pred -------------------CcCCCC---------cHHHHHHHHHHHHhCCCeEEEec---hHH-HHHHHCCC-CCcEEe
Confidence 145567 99999999999999888899997 343 66777777 899984
|
The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff. |
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=251.60 Aligned_cols=223 Identities=32% Similarity=0.430 Sum_probs=190.3
Q ss_pred CeEEEEECCccCCCC--ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHh
Q 006709 100 GTFVVIISGEIVSSP--YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAG 176 (634)
Q Consensus 100 k~iVIKLGGsvL~~~--~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a~G 176 (634)
|++|||+||++++++ .+.+++++|+.+.+.|.++|||||||++++.+++++++.+++.++.|+|+......+ +.+++
T Consensus 1 k~~ViK~GGs~l~~~~~~~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 80 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKDEELRELADDIALLSQLGIKVVVVHGGGSFTDELLEKYGIEPKFVDGSRVTDIETGLIITMAAAA 80 (242)
T ss_dssp SEEEEEE-HHGHSSHSHHHHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHCTHTTSEETHHCHBHHHHHHHHHHHHHH
T ss_pred CeEEEEECchhhCCchHHHHHHHHHHHHHHhCCCeEEEEECChhhcCchHHhccCCcccchhhhhhhhhhhHHHHHHHhh
Confidence 689999999999997 589999999999999999999999999999999999999999888899998888776 66677
Q ss_pred HHHH-----HHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCC
Q 006709 177 GIRM-----MIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (634)
Q Consensus 177 ~in~-----~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G 251 (634)
.+|. .+++. +..++.. ++++.+.+.++....+.. ..++.+.|+.+|++|
T Consensus 81 ~l~~~~~~~~i~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~l~~~ 134 (242)
T PF00696_consen 81 ELNRDALLDEIVSA---------GERLGAH----AVGLSLSDGGISAAKRDA-------------REVDKEAIRELLEQG 134 (242)
T ss_dssp HHHHHHHHHHHHHH---------HHHCTHH----EEEHHHTGGTEEEEEEES-------------SEEHHHHHHHHHHTT
T ss_pred ccccchhHHHHHHh---------hhhhhHH----HHhhhhhcccchhhhhhh-------------hhhHHHHHHHHHHCC
Confidence 7777 55554 5666665 788888887766654311 157899999999999
Q ss_pred cEEEEcCCc-cCCCCce---eeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhc
Q 006709 252 CLVILSNLG-YSSSGEV---LNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 252 ~IPVv~~v~-~~~~Gei---~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~ 320 (634)
.|||++|.. .+.+|++ .++++|.+|++||.+|+|++|+|+|||||+. +++++|++|+.+|+.++....
T Consensus 135 ~ipVv~g~~~~~~~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~~- 213 (242)
T PF00696_consen 135 IIPVVSGFAGIDDDGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASKS- 213 (242)
T ss_dssp SEEEEESEEEEETTSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHHT-
T ss_pred CEEEEeCCcccCCCCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhcC-
Confidence 999999986 7888988 9999999999999999999999999999873 478999999999999886421
Q ss_pred hhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCC
Q 006709 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (634)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m 400 (634)
++++|| |
T Consensus 214 ----------------------------------------------------------------~~~~~g---------m 220 (242)
T PF00696_consen 214 ----------------------------------------------------------------GDVTGG---------M 220 (242)
T ss_dssp ----------------------------------------------------------------TSSTTT---------H
T ss_pred ----------------------------------------------------------------CCCCCC---------H
Confidence 134566 9
Q ss_pred HHHHHHHHHHHHcCCceEEEcc
Q 006709 401 LSELAAAAFVCRRGVQRVHLLD 422 (634)
Q Consensus 401 ~~Kl~AA~~a~~~Gv~rv~I~~ 422 (634)
..|+.+|..+|+.|+.+|+|+|
T Consensus 221 ~~k~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 221 KPKHPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEeC
Confidence 9999999999999888899986
|
In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A .... |
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=253.57 Aligned_cols=245 Identities=22% Similarity=0.191 Sum_probs=191.1
Q ss_pred CeEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+++||.||||+|..+. ++..++.|+.|.+. +++||+||+|||++.++.+..... -.++.+|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~-------~~~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWK-------EVEPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhc-------CCCCCCc
Confidence 6899999999997622 46788999999887 999999999999998876644322 1266778
Q ss_pred HHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceee-eeecccc------------cC---
Q 006709 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVV------------DG--- 227 (634)
Q Consensus 169 ~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~-ak~~g~~------------~g--- 227 (634)
+++ .+++|.|.++|+++|. ..+++.++. ++-++..|+.|.. .||.|++ +|
T Consensus 74 d~~~a~sqG~iGy~l~q~l~---------~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~ 144 (297)
T PRK09411 74 DVLVAESQGMIGYMLAQSLS---------AQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQM 144 (297)
T ss_pred hhhhhhcccHHHHHHHHHHH---------HcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEE
Confidence 886 6899999999999864 446554444 4577888888877 4566642 11
Q ss_pred -ccccccceE-------EEecHHHHHHHHcCCcEEEEc-----CCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecc
Q 006709 228 -VDYGATGEV-------KKVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (634)
Q Consensus 228 -~d~g~~G~v-------~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDV 294 (634)
.|-.+.++| +.+|.+.|+.||++|+|||++ |+..+.+|...|+|+|.+|+.||.+|+||+|||||||
T Consensus 145 ~~dg~g~rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDV 224 (297)
T PRK09411 145 KRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDA 224 (297)
T ss_pred EecCCceEEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeEEcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCc
Confidence 243456777 899999999999999998887 6666556888999999999999999999999999999
Q ss_pred cccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccC
Q 006709 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (634)
Q Consensus 295 dgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (634)
+|+. +++++|++++.+|++.++.
T Consensus 225 dGV~~n~~~p~~~~I~~it~~e~~~~~~---------------------------------------------------- 252 (297)
T PRK09411 225 DAVYENWGTPQQRAIRHATPDELAPFAK---------------------------------------------------- 252 (297)
T ss_pred hhhccCCCCCCCcCCCCcCHHHHHHhcc----------------------------------------------------
Confidence 9873 4679999999988766531
Q ss_pred CcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 370 ~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
++|| |.+|++||..+++.|..+++|.+ .+. +.+++.++ .||.|.
T Consensus 253 -----------------~~Gg---------M~pKVeAA~~~v~~~g~~a~I~~---l~~-~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 253 -----------------ADGA---------MGPKVTAVSGYVRSRGKPAWIGA---LSR-IEETLAGE-AGTCIS 296 (297)
T ss_pred -----------------CCCC---------cHHHHHHHHHHHHhCCCeEEECC---hhH-HHHHHCCC-CCeEEe
Confidence 1244 99999999999998888888865 232 45666554 799874
|
|
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=254.99 Aligned_cols=253 Identities=20% Similarity=0.223 Sum_probs=190.6
Q ss_pred eEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 006709 101 TFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
++||||||++|..+. ++..+++|+.|.+.|+++|||||+|||++.++....... ..++...|+
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~------~~~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAA------EKVPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc------ccCCCCCcc
Confidence 589999999996421 678999999999999999999999999998887654432 123455666
Q ss_pred HH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCccee----EEeeccCCceee-eeecccc-c-----------C----
Q 006709 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVV-D-----------G---- 227 (634)
Q Consensus 170 ~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~a----v~l~~~dg~~l~-ak~~g~~-~-----------g---- 227 (634)
.+ ...+|.+.+.|..+|++ .|.+.|++.++.+ +.+...|+.|.. .||.|.. + +
T Consensus 75 ~~~a~~~G~ig~~~~~al~~-----~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~ 149 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDN-----ELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFK 149 (308)
T ss_pred hhcchhhHHHHHHHHHHHHH-----HHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEE
Confidence 65 57899999999888864 7899998765543 356666776666 3455532 1 0
Q ss_pred cc--ccccc------eEEEecHHHHHHHHcCCcEEEEc-----CCccCCCCce----eeechHHHHHHHHHHcCCCEEEE
Q 006709 228 VD--YGATG------EVKKVDVTRMRERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLIC 290 (634)
Q Consensus 228 ~d--~g~~G------~v~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~Gei----~nid~D~lAa~LA~aL~AdkLI~ 290 (634)
.| .||.. .++.++.+.|+.||++|+|||++ |+..+. +.+ .++|+|.+|+++|.+|+||+|++
T Consensus 150 ~d~~~g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~-~~~~gveaVid~D~~AallA~~l~Ad~Lii 228 (308)
T cd04235 150 EDAGRGYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREG-GGLKGVEAVIDKDLASALLAEEINADLLVI 228 (308)
T ss_pred EeCCCCceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcC-CceeeeeeccCccHHHHHHHHHcCCCEEEE
Confidence 01 22332 23688999999999999999998 444433 433 35799999999999999999999
Q ss_pred eecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhc
Q 006709 291 IIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (634)
Q Consensus 291 LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (634)
+|||||++ +++++|++++.+|+.+++.++
T Consensus 229 lTdVdGVy~~~~~pda~~i~~Is~~e~~~l~~~g---------------------------------------------- 262 (308)
T cd04235 229 LTDVDNVYINFGKPNQKALEQVTVEELEKYIEEG---------------------------------------------- 262 (308)
T ss_pred EecCCeEECCCCCCCCeEcCCcCHHHHHHHHhcC----------------------------------------------
Confidence 99999973 468999999998888876431
Q ss_pred cccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 366 ~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
.|++|| |.+|+++|..+++.|..+++|.+ .+. +.+++.++ .||.|.
T Consensus 263 -------------------~~~tGG---------M~pKv~aA~~~a~~gg~~v~I~~---~~~-i~~aL~G~-~GT~I~ 308 (308)
T cd04235 263 -------------------QFAPGS---------MGPKVEAAIRFVESGGKKAIITS---LEN-AEAALEGK-AGTVIV 308 (308)
T ss_pred -------------------ccccCC---------cHHHHHHHHHHHHhCCCeEEECC---HHH-HHHHHCCC-CCeEEC
Confidence 145667 99999999999998877788877 333 55666555 799873
|
Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK). |
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=263.89 Aligned_cols=237 Identities=20% Similarity=0.272 Sum_probs=177.5
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
++++|||+||++|++++ +..++++|+.|++.|++|||||||+++++. .+++.. ++.+++..+++
T Consensus 5 ~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~--~~l~~~----~~~~~~~~qal--- 75 (368)
T PRK13402 5 WKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGY--HKLGFI----DRPSVPEKQAM--- 75 (368)
T ss_pred CcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCc--cccCCC----CCCCccHHHHH---
Confidence 58999999999998742 688999999999999999999999877765 455532 23355554433
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEec-HHHHHHHHcC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG 250 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd-~~~I~~LLd~ 250 (634)
+++||.. ++..|. ..|+++|++ +.++...+.+|...++ ..+ .++|+.||+.
T Consensus 76 -aavGq~~--l~~~~~-----~~f~~~g~~----~aqvLlT~~d~~~~~~----------------y~n~~~~l~~LL~~ 127 (368)
T PRK13402 76 -AAAGQGL--LMATWS-----KLFLSHGFP----AAQLLLTHGDLRDRER----------------YINIRNTINVLLER 127 (368)
T ss_pred -HHhhHHH--HHHHHH-----HHHHHCCCe----EEEEEEecchhhhHHH----------------HHHHHHHHHHHHHC
Confidence 4566665 444442 268999998 5565545444421111 112 3799999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCH--HHHHHHHHhhch
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVK 321 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~--~e~~~li~~~~~ 321 (634)
|+|||+++++...+.++.++|+|.+|+++|.+++||.|+|+|||||++ |++++|++|+. +++..+...
T Consensus 128 g~IPIinenD~v~~~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~l~~~--- 204 (368)
T PRK13402 128 GILPIINENDAVTTDRLKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYAMAGG--- 204 (368)
T ss_pred CcEEEEeCCCcEeecccccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHHHhcc---
Confidence 999999987655556788999999999999999999999999999972 36899999985 344333110
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
.+++ +.+|| |.
T Consensus 205 -----------------------------------------------~~s~-------------~gtGG---------M~ 215 (368)
T PRK13402 205 -----------------------------------------------AGSN-------------VGTGG---------MR 215 (368)
T ss_pred -----------------------------------------------cccC-------------cCcCC---------ch
Confidence 0111 34677 99
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
+||+||..|.+.|++ ++|+++..++. |.+++.++..||.|.+.
T Consensus 216 ~Kl~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 216 TKIQAAKIAMSHGIE-TFIGNGFTADI-FNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHHHHHHHHHcCCc-EEEEcCCCchH-HHHHhcCCCCceEEecC
Confidence 999999999999998 89999999886 66788888899999754
|
|
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=253.05 Aligned_cols=245 Identities=18% Similarity=0.178 Sum_probs=171.7
Q ss_pred CCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEE-EEeCchHHHHHHHHHcCC-ccc----ccCCccCCC
Q 006709 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGH-EAK----YLGRYRITD 164 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvV-LVHGGG~~I~~~l~~lg~-~~~----~~~G~RvT~ 164 (634)
.+++|||+|||+|++++ +..++++|+.|++.|++|| |+||++.+.+..+...+. ... ...+.++..
T Consensus 8 ~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~ 87 (284)
T cd04256 8 AKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDM 87 (284)
T ss_pred CCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCC
Confidence 48999999999998753 6889999999999999999 666666666666654332 000 011111111
Q ss_pred HHHHH--HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHH
Q 006709 165 SESLA--AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (634)
Q Consensus 165 ~~~l~--~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~ 242 (634)
+..+. .+.+++||.. |++.|++ .|.+||++ +.++.....+|-..+ ......+
T Consensus 88 ~~~~~~~qa~aa~gq~~--L~~~y~~-----~f~~~~~~----~~q~llt~~d~~~~~---------------~~~~~~~ 141 (284)
T cd04256 88 PQMELDGRACAAVGQSG--LMALYEA-----MFTQYGIT----VAQVLVTKPDFYDEQ---------------TRRNLNG 141 (284)
T ss_pred cchhHHHHHHHHcccHH--HHHHHHH-----HHHHcCCc----HHHeeeeccccccHH---------------HHHHHHH
Confidence 22111 2346677655 6666643 79999987 333333333332211 1224568
Q ss_pred HHHHHHcCCcEEEEcCCccCC-------CCce--eeechHHHHHHHHHHcCCCEEEEeecccccC------CCCcccccc
Q 006709 243 RMRERLDGGCLVILSNLGYSS-------SGEV--LNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFL 307 (634)
Q Consensus 243 ~I~~LLd~G~IPVv~~v~~~~-------~Gei--~nid~D~lAa~LA~aL~AdkLI~LTDVdgld------~~gklI~~l 307 (634)
+|+.||+.|+|||+++++... +++. .++|+|.+|+++|.+++||+|+|+|||||++ +++++|+++
T Consensus 142 ~l~~lL~~g~iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i 221 (284)
T cd04256 142 TLEELLRLNIIPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTF 221 (284)
T ss_pred HHHHHHHCCCEEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccc
Confidence 999999999999999754322 1233 4599999999999999999999999999973 358999999
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+..+...+... . .+ .+.
T Consensus 222 ~~~~~~~~~~~-~-------------------------------------------------~s-------------~~g 238 (284)
T cd04256 222 YPGDQQSITFG-T-------------------------------------------------KS-------------RVG 238 (284)
T ss_pred cHhHHHHhhcc-c-------------------------------------------------cc-------------Ccc
Confidence 97665433210 0 01 134
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+|| |.+||+||..|.+.|++ ++|++|..++. +.+++.++..||.|
T Consensus 239 tGG---------M~~Kl~Aa~~a~~~Gi~-v~I~~G~~~~~-i~~~l~G~~~GT~~ 283 (284)
T cd04256 239 TGG---------MEAKVKAALWALQGGTS-VVITNGMAGDV-ITKILEGKKVGTFF 283 (284)
T ss_pred cCC---------cHHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHcCCCCCEEe
Confidence 677 99999999999999997 89999999987 67888888899987
|
G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. |
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=257.62 Aligned_cols=238 Identities=21% Similarity=0.266 Sum_probs=178.7
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
++++|||+||++|+++. +.+++++|+.+++.|+++||||||+ +...+..+++..+. ......+ +
T Consensus 8 ~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGa--i~~g~~~l~l~~~~------~~~~~~q-a 78 (372)
T PRK05429 8 ARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGA--VAAGRERLGLPERP------KTLAEKQ-A 78 (372)
T ss_pred CCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccH--hhhhHhhcCCCCCC------CchHHHH-H
Confidence 57999999999998742 7899999999999999999999984 55666777776431 1222233 2
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEec-HHHHHHHHcC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG 250 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd-~~~I~~LLd~ 250 (634)
++++||.. ++..|. ..|+++|++ +.++...+.+|.... +.+| .+.|+.||+.
T Consensus 79 ~aavGq~~--L~~~~~-----~~l~~~gi~----~~qil~t~~d~~~~~----------------~~ln~~~~i~~Ll~~ 131 (372)
T PRK05429 79 AAAVGQSR--LMQAYE-----ELFARYGIT----VAQILLTRDDLEDRE----------------RYLNARNTLRTLLEL 131 (372)
T ss_pred HHHHhHHH--HHHHHH-----HHHHHCCCC----EEEEEeehhHhhhhh----------------HhhhHHHHHHHHHHC
Confidence 34455533 334332 368999998 566555554443111 2334 4899999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCH--HHHHHHHHhhch
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVK 321 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~--~e~~~li~~~~~ 321 (634)
|+|||+++++.....++.++|+|.+|++||.+|+||+|+|+|||||++ |++++|++++. +|++.++...
T Consensus 132 g~IPVi~~nd~v~~~~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~~~~~-- 209 (372)
T PRK05429 132 GVVPIINENDTVATDEIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAMAGGA-- 209 (372)
T ss_pred CCEEEEcCCCccceecccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHHhcCC--
Confidence 999999986655555677899999999999999999999999999972 35899999986 4565553210
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
++ ++++|| |.
T Consensus 210 ------------------------------------------------~~-------------~~gtGG---------M~ 219 (372)
T PRK05429 210 ------------------------------------------------GS-------------GLGTGG---------MA 219 (372)
T ss_pred ------------------------------------------------CC-------------CcCcCC---------cH
Confidence 01 245677 99
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
+||+||..|.+.|++ ++|+||..++. +.+++.+++.||.|.+.
T Consensus 220 ~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 220 TKLEAARIATRAGIP-VVIASGREPDV-LLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHhcCCCCCEEEeeC
Confidence 999999999999997 99999999885 77888888899999754
|
|
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=246.42 Aligned_cols=233 Identities=15% Similarity=0.164 Sum_probs=167.6
Q ss_pred CCeEEEEECCccCCCCC------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~ 172 (634)
.+++|||+|||+|++++ +..++++|+.|++ ++++||||||+ +......+++... ... ...++
T Consensus 8 ~~riVIKlG~Svit~~~~~~~~~~~~l~~~i~~l~~-~~~vilVssGa--va~g~~~~~~~~~--------~~~-~~qa~ 75 (264)
T PTZ00489 8 VKRIVVKVGSSILVDNQEIAAHRIEALCRFIADLQT-KYEVILVTSGA--VAAGYTKKEMDKS--------YVP-NKQAL 75 (264)
T ss_pred CCEEEEEeccceeeCCCCcCHHHHHHHHHHHHHHhc-CCeEEEEecCh--HhcChhhcCCCcc--------ccH-HHHHH
Confidence 58899999999998754 6889999999986 79999999886 3333445554321 111 22345
Q ss_pred HHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEE-ecHHHHHHHHcCC
Q 006709 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK-VDVTRMRERLDGG 251 (634)
Q Consensus 173 ~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~-vd~~~I~~LLd~G 251 (634)
+++||.. |+..|. +.|.++|+. +.++.....++-. +.+. ...++|++||+.|
T Consensus 76 aaiGq~~--L~~~y~-----~~f~~~~~~----~aqiLlt~~d~~~----------------~~~~~n~~~~l~~lL~~g 128 (264)
T PTZ00489 76 ASMGQPL--LMHMYY-----TELQKHGIL----CAQMLLAAYDLDS----------------RKRTINAHNTIEVLISHK 128 (264)
T ss_pred HHhCHHH--HHHHHH-----HHHHhCCCe----EEEeeeecccccc----------------chhhHHHHHHHHHHHHCC
Confidence 6777744 444432 368999987 4444333222211 1122 2368999999999
Q ss_pred cEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC---C----CCcc---ccccCHHHHHHHHHhhch
Q 006709 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHL---IRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 252 ~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld---~----~gkl---I~~ls~~e~~~li~~~~~ 321 (634)
+|||+++++..+..|+.|+|+|.+|+.||..++||+|||+|||||++ | ++++ |++++.+++.... ..
T Consensus 129 ~VPIinend~~~~~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~~~--~~- 205 (264)
T PTZ00489 129 VIPIINENDATALHELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVAEA--TP- 205 (264)
T ss_pred CEEEECCCCCcccceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHHhc--Cc-
Confidence 99999998877777899999999999999999999999999999973 2 3555 6677765442210 00
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
. ..+++|| |.
T Consensus 206 ------------------------------------------------~-------------~~~~tGG---------M~ 215 (264)
T PTZ00489 206 ------------------------------------------------N-------------NRFATGG---------IV 215 (264)
T ss_pred ------------------------------------------------C-------------CCcccCC---------hH
Confidence 0 0246778 99
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhc--CCcccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD--GMGTMVAS 445 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~--g~GT~I~~ 445 (634)
+||+||..|.+.|++ ++|++|..++. +..++.++ ..||.|.+
T Consensus 216 ~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-i~~~l~g~~~~~GT~~~~ 259 (264)
T PTZ00489 216 TKLQAAQFLLERGGK-MYLSSGFHLEK-ARDFLIGGSHEIGTLFYP 259 (264)
T ss_pred HHHHHHHHHHHCCCC-EEEEeCCCchH-HHHHHcCCCCCCceEEee
Confidence 999999999999997 89999999986 56666554 37999965
|
|
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-28 Score=251.44 Aligned_cols=250 Identities=21% Similarity=0.193 Sum_probs=183.3
Q ss_pred eEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 006709 101 TFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
++|||||||+|.++. ++..++.|+.|.+ |+++||+||+|||++.++.+..... ..++.+|+
T Consensus 2 ~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~-------~~~~~pl~ 73 (307)
T PRK12354 2 RIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYK-------DVTPYPLD 73 (307)
T ss_pred eEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhc-------CCCCCCcc
Confidence 699999999998743 3577889999887 9999999999999886654432211 12455666
Q ss_pred HH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceee-eeecccc----------------cCcccc
Q 006709 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLA-AKRKGVV----------------DGVDYG 231 (634)
Q Consensus 170 ~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~-ak~~g~~----------------~g~d~g 231 (634)
.+ .+.+|.+.+.++++|.+ .|.+..+..-+.++-++..|..|-. .|+.|++ -..|-.
T Consensus 74 ~~~a~sqg~iGy~l~q~l~~-----~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~ 148 (307)
T PRK12354 74 VLGAETEGMIGYMLEQELGN-----LLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGD 148 (307)
T ss_pred hhcccccchHHHHHHHHHHH-----HhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCC
Confidence 65 56889999999998764 4444333333335667777777766 3455432 112323
Q ss_pred ccceEE-------EecHHHHHHHHcCCcEEEEc-----CCccCCCCcee----eechHHHHHHHHHHcCCCEEEEeeccc
Q 006709 232 ATGEVK-------KVDVTRMRERLDGGCLVILS-----NLGYSSSGEVL----NCNTYEVATACALAIEADKLICIIDGP 295 (634)
Q Consensus 232 ~~G~v~-------~vd~~~I~~LLd~G~IPVv~-----~v~~~~~Gei~----nid~D~lAa~LA~aL~AdkLI~LTDVd 295 (634)
+.++|. .++.+.|+.||++|+|||.+ |+..+.+++.. ++|+|.+|++||.+|+||+|+||||||
T Consensus 149 g~rrVv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVd 228 (307)
T PRK12354 149 YFRRVVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVD 228 (307)
T ss_pred ceEEEecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCc
Confidence 445554 79999999999999998886 66655545443 479999999999999999999999999
Q ss_pred ccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCC
Q 006709 296 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (634)
Q Consensus 296 gld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (634)
|+. +++++|++++.+|++++ .
T Consensus 229 GVy~~~~~p~~k~i~~it~~e~~~~----~-------------------------------------------------- 254 (307)
T PRK12354 229 AVYLDWGKPTQRAIAQATPDELREL----G-------------------------------------------------- 254 (307)
T ss_pred ceecCCCCCCCeECCCCCHHHHHhh----C--------------------------------------------------
Confidence 873 45789999998876654 0
Q ss_pred cccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 371 ~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|++|| |.+|++||..+++.|..+++|.+ ... +.+++.++ .||.|.++
T Consensus 255 ---------------f~~Gg---------M~pKV~AA~~~~~~gg~~viI~~---~~~-l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 255 ---------------FAAGS---------MGPKVEAACEFVRATGKIAGIGS---LED-IQAILAGE-AGTRISPE 301 (307)
T ss_pred ---------------CCcCC---------hHHHHHHHHHHHHhCCCEEEECC---HHH-HHHHHCCC-CceEEecC
Confidence 34566 99999999999988887788854 233 56777654 89999764
|
|
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=238.95 Aligned_cols=257 Identities=19% Similarity=0.207 Sum_probs=200.8
Q ss_pred CeEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 100 GTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+++||.||||+|.... ++..++.|+.|.+.|+++||+||+|||++.++.+....... .-++...|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~~----~~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADSE----KGVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhccc----cCCCCccH
Confidence 5799999999996542 67889999999999999999999999999887765442211 12456677
Q ss_pred HHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceee-eeeccccc----------------
Q 006709 169 AAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVVD---------------- 226 (634)
Q Consensus 169 ~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~-ak~~g~~~---------------- 226 (634)
+.+ .+++|+|.++|.++|.+ .|.++|++.++. .+-++..|+.|.. .||.|++-
T Consensus 77 d~~~AmsQG~IGy~l~qal~n-----~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~ 151 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRN-----ELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVF 151 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHH-----HHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEE
Confidence 876 67999999999999975 688889765444 4578888888988 46777630
Q ss_pred --Cccccccce------EEEecHHHHHHHHcCCcEEEEc-----CCccCCC---CceeeechHHHHHHHHHHcCCCEEEE
Q 006709 227 --GVDYGATGE------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLIC 290 (634)
Q Consensus 227 --g~d~g~~G~------v~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~---Gei~nid~D~lAa~LA~aL~AdkLI~ 290 (634)
..+.||... ++.++.+.|+.|+++|.++|.+ |+..+.. |.-.+||.|..++.||..++||.||+
T Consensus 152 keD~~rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liI 231 (312)
T COG0549 152 KEDAGRGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLII 231 (312)
T ss_pred EecCCCCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEE
Confidence 112333332 3688999999999999999987 3333333 55679999999999999999999999
Q ss_pred eeccccc-----CCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhc
Q 006709 291 IIDGPIL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIA 365 (634)
Q Consensus 291 LTDVdgl-----d~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (634)
|||||.+ .|+.+.+++++.+|++++++++
T Consensus 232 LTdVd~Vy~n~gkp~q~~L~~v~~~e~~~yl~eg---------------------------------------------- 265 (312)
T COG0549 232 LTDVDAVYVNFGKPNQQALDRVTVDEMEKYLAEG---------------------------------------------- 265 (312)
T ss_pred EeccchheecCCCccchhhcccCHHHHHHHHhcC----------------------------------------------
Confidence 9999976 2788999999999999998653
Q ss_pred cccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 366 TFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 366 ~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
.|+.|+ |.||++||..+++++-+++.|.+ .+. +.+++ ....||.|.
T Consensus 266 -------------------~Fa~GS---------M~PKVeAai~Fv~~~gk~A~Its--Le~--~~~~l-~g~~GT~I~ 311 (312)
T COG0549 266 -------------------QFAAGS---------MGPKVEAAISFVENTGKPAIITS--LEN--AEAAL-EGKAGTVIV 311 (312)
T ss_pred -------------------CCCCCC---------ccHHHHHHHHHHHcCCCceEECc--HHH--HHHHh-ccCCCcEec
Confidence 266677 99999999999999988887775 222 34544 467899875
|
|
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=243.39 Aligned_cols=235 Identities=20% Similarity=0.250 Sum_probs=171.1
Q ss_pred eEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~ 173 (634)
++|||+||+++++++ +.+++++|+.++..|+++||||||+... ....+++.... ......+ +.+
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~--g~~~~~~~~~~------~~~~~~~-~~~ 71 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAA--GRQRLGLEKRP------KTLPEKQ-ALA 71 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhh--ChhhhccCcCC------CchhHHH-HHH
Confidence 589999999999875 7889999999999999999999864322 23445543221 1222333 334
Q ss_pred HHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcE
Q 006709 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (634)
Q Consensus 174 a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~I 253 (634)
+.|+.. ++..+. ..|+++|++ +.++...+.+|..++. .....+.|+.||+.|+|
T Consensus 72 ~~Gq~~--l~~~~~-----~~l~~~Gi~----~~q~l~t~~~~~~~~~---------------~~~~~~~i~~ll~~g~i 125 (251)
T cd04242 72 AVGQSL--LMALYE-----QLFAQYGIK----VAQILLTRDDFEDRKR---------------YLNARNTLETLLELGVI 125 (251)
T ss_pred HHhHHH--HHHHHH-----HHHHHcCCe----EEEEEEehhHhcchHH---------------HHHHHHHHHHHHHCCCE
Confidence 556543 443332 268999998 5555555554433211 01125889999999999
Q ss_pred EEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccC--HHHHHHHHHhhchhhh
Q 006709 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT--LQEADSLIRQRVKQSE 324 (634)
Q Consensus 254 PVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls--~~e~~~li~~~~~~~~ 324 (634)
||+++++.-.++++.++|+|.+|++||.+|+||+|+|+|||||++ +++++|++++ .+|+..+....
T Consensus 126 PVv~~~d~v~~~~~~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~----- 200 (251)
T cd04242 126 PIINENDTVATEEIRFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMAGGS----- 200 (251)
T ss_pred EEEcCCCCeeeeccccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHhccc-----
Confidence 999986544445567889999999999999999999999999973 3589999999 77776653110
Q ss_pred hHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHH
Q 006709 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (634)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl 404 (634)
. ..|++|| |.+|+
T Consensus 201 ---------------------------------------------~-------------~~~~tgg---------m~~Kl 213 (251)
T cd04242 201 ---------------------------------------------G-------------SSVGTGG---------MRTKL 213 (251)
T ss_pred ---------------------------------------------C-------------cCcccCC---------cHHHH
Confidence 0 0245677 99999
Q ss_pred HHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 405 ~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
++|..+.+.|++ ++|+||..++. +.+++.+++.||.|.
T Consensus 214 ~a~~~a~~~gi~-v~I~~g~~~~~-i~~~l~g~~~GT~i~ 251 (251)
T cd04242 214 KAARIATEAGIP-VVIANGRKPDV-LLDILAGEAVGTLFL 251 (251)
T ss_pred HHHHHHHHCCCc-EEEEcCCCCCH-HHHHHcCCCCCeEeC
Confidence 999999999997 99999999986 677888888999873
|
G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir |
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-27 Score=241.59 Aligned_cols=237 Identities=20% Similarity=0.214 Sum_probs=167.9
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEE-eCchHHHHHHHHHcCCcccccCCccCCCHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLV-PGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLV-HGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
++++|||+||++|++++ +.+++++|+.++..|+++||| ||++.+.+..+ ++.. +..+...+++
T Consensus 9 ~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l---~~~~------~~~~~~~~~a 79 (266)
T PRK12314 9 AKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKL---KLDK------RPTSLAEKQA 79 (266)
T ss_pred CCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceee---cccc------CCCCHHHHHH
Confidence 57999999999998542 789999999999999999987 66666655443 2221 1123344444
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
+ ++.||.. ++..|. ..|+++|++ +.++...+.+|-. .+......++|+.||+.
T Consensus 80 ~-aa~Gq~~--l~~~~~-----~~~~~~g~~----~~q~llT~~~~~~---------------~~~~~~~~~~l~~ll~~ 132 (266)
T PRK12314 80 L-AAVGQPE--LMSLYS-----KFFAEYGIV----VAQILLTRDDFDS---------------PKSRANVKNTFESLLEL 132 (266)
T ss_pred H-HHHhHHH--HHHHHH-----HHHHHcCCe----EEEEEEecccccc---------------hHHHHHHHHHHHHHHHC
Confidence 3 5667643 444443 368999987 3333333333321 11223346899999999
Q ss_pred CcEEEEcCCccCCCCc--eeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCH--HHHHHHHHhh
Q 006709 251 GCLVILSNLGYSSSGE--VLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQR 319 (634)
Q Consensus 251 G~IPVv~~v~~~~~Ge--i~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~--~e~~~li~~~ 319 (634)
|+|||+++++.-...+ ..++|+|.+|++||.+|+||+|+|+|||||++ |++++|++|+. .+..++...
T Consensus 133 g~IPVv~~nd~v~~~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~~~~~- 211 (266)
T PRK12314 133 GILPIVNENDAVATDEIDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILALAGG- 211 (266)
T ss_pred CCEEEEcCCCCeeeccccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHHHhcc-
Confidence 9999999754332222 34779999999999999999999999999973 35888888874 222222100
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
.++ .+++||
T Consensus 212 -------------------------------------------------~~~-------------~~~tGG--------- 220 (266)
T PRK12314 212 -------------------------------------------------AGS-------------KFGTGG--------- 220 (266)
T ss_pred -------------------------------------------------CCC-------------CcccCc---------
Confidence 001 145677
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|.+|++||..|.+.|++ ++|++|..++. +.+++.++..||.|.+
T Consensus 221 M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-i~~~l~g~~~GT~i~~ 264 (266)
T PRK12314 221 MVTKLKAAKFLMEAGIK-MVLANGFNPSD-ILDFLEGESIGTLFAP 264 (266)
T ss_pred hHHHHHHHHHHHHCCCe-EEEEcCCCchH-HHHHHcCCCCceEEcc
Confidence 99999999999999997 99999999987 6788888889999965
|
|
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=248.08 Aligned_cols=237 Identities=17% Similarity=0.227 Sum_probs=171.0
Q ss_pred CeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 006709 100 GTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~ 172 (634)
+++|||+||++|++++ +..++++|+.+++.|+++|||||||. ...+..++++.+ ..+....+ +.
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~--~~g~~~lg~~~~------~~~l~~~q-a~ 71 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAI--AAGFEALGLPER------PKTLAEKQ-AL 71 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHH--hcCccccCCCCC------ccchHHHH-HH
Confidence 4799999999999864 68899999999999999999999974 334555666532 12222333 34
Q ss_pred HHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH-HHHHHHHcCC
Q 006709 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGG 251 (634)
Q Consensus 173 ~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~-~~I~~LLd~G 251 (634)
++.|+.. ++..+. ..|.++|++ +.++...+.+|... .+..|. ++|+.||+.|
T Consensus 72 aa~Gq~~--l~~~~~-----~~l~~~Gi~----~aqillt~~d~~~~----------------~~~lna~~~i~~Ll~~g 124 (363)
T TIGR01027 72 AAVGQVR--LMQLYE-----QLFSQYGIK----VAQILLTRADFSDR----------------ERYLNARNTLEALLELG 124 (363)
T ss_pred HHhChHH--HHHHHH-----HHHHHcCCe----EEEEEEeccchhhH----------------HHHHHHHHHHHHHHhCC
Confidence 5666643 344332 268999997 44543333332211 122344 8999999999
Q ss_pred cEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHH-HHHHHHhhchhh
Q 006709 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQE-ADSLIRQRVKQS 323 (634)
Q Consensus 252 ~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e-~~~li~~~~~~~ 323 (634)
.|||+++++.....++.++|+|.+|+.+|.+|+||+|+|+|||||++ |++++|++++..+ ....+..+.
T Consensus 125 ~iPVi~end~v~~~~l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~--- 201 (363)
T TIGR01027 125 VVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDS--- 201 (363)
T ss_pred CEEEEeCCCceeeeecCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCC---
Confidence 99999976544444566789999999999999999999999999972 3579999997531 211121100
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
++ +|++|| |.+|
T Consensus 202 ----------------------------------------------~~-------------~~gtGG---------M~~K 213 (363)
T TIGR01027 202 ----------------------------------------------GS-------------SVGTGG---------MRTK 213 (363)
T ss_pred ----------------------------------------------Cc-------------CcCcCC---------chHH
Confidence 01 256777 9999
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|+||..|.+.|++ ++|+++..++. |.+++.++..||.|.+
T Consensus 214 l~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~ 253 (363)
T TIGR01027 214 LQAADLATRAGVP-VIIASGSKPEK-IADALEGAPVGTLFHA 253 (363)
T ss_pred HHHHHHHHHCCCe-EEEEeCCCccH-HHHHhcCCCCcEEEee
Confidence 9999999999997 99999998876 6677888889999976
|
Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family. |
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=232.24 Aligned_cols=245 Identities=20% Similarity=0.208 Sum_probs=178.1
Q ss_pred CCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCH---HH
Q 006709 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDS---ES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~---~~ 167 (634)
-++||||+|++++++++ +..++++++.|++.|++++||++|+.+. +++++..+.....-+|-+-. +.
T Consensus 9 a~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~--G~qrLr~~~~~s~s~r~~l~~~~~l 86 (285)
T KOG1154|consen 9 AYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAF--GRQRLRQELLPSSSMRQTLKPQSEL 86 (285)
T ss_pred ceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhh--hHHHhhhhhccchhHHHhhCCccch
Confidence 47999999999999865 6789999999999999999999996554 44555444322111111111 12
Q ss_pred HHH-HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEec-HHHHH
Q 006709 168 LAA-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMR 245 (634)
Q Consensus 168 l~~-~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd-~~~I~ 245 (634)
.+. +++++||-+ |++.|. ..|.++|+. ..++.....+|..... +.| .++|.
T Consensus 87 ~e~rA~AAvGQ~~--Lmalye-----~lF~Qy~~~----iAQvLvT~~Di~d~~~----------------r~Nl~~Ti~ 139 (285)
T KOG1154|consen 87 AEKRACAAVGQSG--LMALYE-----TLFTQYGIT----IAQVLVTRNDILDEQQ----------------RKNLQNTIS 139 (285)
T ss_pred hhHHHHHHhCcch--HHHHHH-----HHHHHhccc----hheeeecCcchhhHHH----------------HHHHHHHHH
Confidence 223 457778766 566554 279999987 4566556655554332 123 48999
Q ss_pred HHHcCCcEEEEcCCccCCCCceeeec---hHHHHHHHHHHcCCCEEEEeecccccC---CCC---ccccccCHHHHHHHH
Q 006709 246 ERLDGGCLVILSNLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD---ESG---HLIRFLTLQEADSLI 316 (634)
Q Consensus 246 ~LLd~G~IPVv~~v~~~~~Gei~nid---~D~lAa~LA~aL~AdkLI~LTDVdgld---~~g---klI~~ls~~e~~~li 316 (634)
+||..|+|||+|.++.-+.-++.|.| ||.+|+.+|..++||.||+||||+|++ |+. ++|+..+..
T Consensus 140 eLL~m~viPIvNeNDavs~~~~~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~------ 213 (285)
T KOG1154|consen 140 ELLSMNVIPIVNENDAVSPREIPFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPG------ 213 (285)
T ss_pred HHHhCCceeeecCCCccCCcccccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccC------
Confidence 99999999999998766666777777 999999999999999999999999985 233 333333221
Q ss_pred HhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccccc
Q 006709 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (634)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~ 396 (634)
|. ...-+|+.+|.+|+ ||
T Consensus 214 ---------------------------~~----------------~v~~tfG~~SkvGt-------------GG------ 231 (285)
T KOG1154|consen 214 ---------------------------DP----------------QVSTTFGSKSKVGT-------------GG------ 231 (285)
T ss_pred ---------------------------CC----------------CCccccCccCccCc-------------Cc------
Confidence 00 01235666666654 56
Q ss_pred ccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 397 ~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|.+||.||.+|..+||. |.|.+|..+.. +..++.+...||.|..
T Consensus 232 ---M~tKv~AA~~A~~~Gv~-viI~~g~~p~~-I~~iv~g~kvgt~f~~ 275 (285)
T KOG1154|consen 232 ---METKVKAAVNALNAGVS-VIITNGDAPEN-ITDIVEGKKVGTFFEQ 275 (285)
T ss_pred ---chhhHHHHHHHhcCCce-EEEeCCCChHH-HHHHHhhhhhhhhhhh
Confidence 99999999999999997 89999999987 7788888889999864
|
|
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=226.18 Aligned_cols=189 Identities=18% Similarity=0.220 Sum_probs=152.5
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHH
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI 178 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGG-G~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~i 178 (634)
.+|||+||+++.+++ +++++++|+.+++.|.++|||||| |..++++++...... +.++...++++......+
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~------~~~~~~~~~~i~a~Ge~~ 74 (239)
T cd04261 1 LIVQKFGGTSVASIERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS------PRPPARELDVLLSTGEQV 74 (239)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc------cCCCHHHHHHHHHHHHHH
Confidence 379999999998865 899999999999999999999997 666776665421111 346777888764333356
Q ss_pred HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcC
Q 006709 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (634)
Q Consensus 179 n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~ 258 (634)
+..+... .|+++|++ ++++++.+..+++..+ ++ .|++..++.+.|+.+++.|.|||+++
T Consensus 75 ~~~l~~~--------~l~~~g~~----a~~l~~~~~~l~~~~~--------~~-~~~i~~~~~~~l~~ll~~~~ipVi~G 133 (239)
T cd04261 75 SIALLAM--------ALNRLGIK----AISLTGWQAGILTDGH--------HG-KARIIDIDPDRIRELLEEGDVVIVAG 133 (239)
T ss_pred HHHHHHH--------HHHhCCCC----eEEechhhCCEEecCC--------CC-cceechhhHHHHHHHHHcCCeEEEcC
Confidence 6665443 47899998 8899998877776542 22 57788888999999999999999998
Q ss_pred C-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC---C----CCccccccCHHHHHHHH
Q 006709 259 L-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLI 316 (634)
Q Consensus 259 v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld---~----~gklI~~ls~~e~~~li 316 (634)
. +.+.+|+++++ |+|.+|+.+|.+|+||+|+++|||||++ | ++++|++++.+|++++.
T Consensus 134 ~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~ 202 (239)
T cd04261 134 FQGINEDGDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMA 202 (239)
T ss_pred ccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHH
Confidence 7 67788999999 9999999999999999999999999973 2 68999999998888775
|
In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and |
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=225.90 Aligned_cols=188 Identities=18% Similarity=0.227 Sum_probs=153.6
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeC-chHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH-
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG- 177 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHG-GG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~- 177 (634)
.+|||+||+++.+++ +++++++|+.+++.|.++||||| +|+.++.+++..+....+ .+.+.++++ .+.|+
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~~~~~------~~~~~~~~i-~~~Ge~ 73 (239)
T cd04246 1 IIVQKFGGTSVADIERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKEVSPR------PSPRELDML-LSTGEQ 73 (239)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHhccC------CCHHHHHHH-HHHhHH
Confidence 379999999998865 89999999999999999999998 578888888877665432 256677775 34454
Q ss_pred HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEc
Q 006709 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (634)
Q Consensus 178 in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~ 257 (634)
++..+... .|+++|++ ++++++.+..+++..+ ++ .|++..++.+.|++++++|.|||++
T Consensus 74 ~~~~~~~~--------~l~~~g~~----a~~l~~~~~~l~~~~~--------~~-~~~~~~~~~~~l~~ll~~g~ipVi~ 132 (239)
T cd04246 74 ISAALLAM--------ALNRLGIK----AISLTGWQAGILTDDH--------HG-NARIIDIDPKRILEALEEGDVVVVA 132 (239)
T ss_pred HHHHHHHH--------HHHhCCCC----eEEeccccCCEEecCC--------CC-ceeechhhHHHHHHHHhcCCEEEEc
Confidence 45554333 47899998 7899988877776543 22 4677888999999999999999999
Q ss_pred CC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHH
Q 006709 258 NL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 258 ~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li 316 (634)
+. +.+.+|+++++ |+|.+|+.+|.+|+||+|+|+|||||++ +++++|++++.+|+++++
T Consensus 133 g~~~~~~~g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~ 202 (239)
T cd04246 133 GFQGVNEDGEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMA 202 (239)
T ss_pred CccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHH
Confidence 86 66778899988 8999999999999999999999999973 368999999999888775
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati |
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=224.42 Aligned_cols=190 Identities=18% Similarity=0.229 Sum_probs=156.7
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEe-----CchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEA 174 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVH-----GGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a 174 (634)
.+|||+||+++++++ +++++++|+.+.+.|.++|||| |||++++..+..++... +.++|. ++++.+ .+
T Consensus 1 ~~ViK~GGs~l~~~~~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~----~~~~t~-~~~~~~-~~ 74 (244)
T cd04260 1 IIVQKFGGTSVSTKERREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE----NSDISP-RELDLL-MS 74 (244)
T ss_pred CEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh----cCCCCH-HHHHHH-HH
Confidence 379999999999877 8999999999999999888777 78888888766654332 456655 457766 56
Q ss_pred HhHHHHH--HHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCc
Q 006709 175 AGGIRMM--IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (634)
Q Consensus 175 ~G~in~~--Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~ 252 (634)
.|+++.. +++ .|+++|++ ++++++.+..+++... ++ .|++..++.+.|+.+|+.|.
T Consensus 75 ~Ge~~~~~~~~~---------~l~~~Gi~----a~~l~~~~~~lit~~~--------~~-~~~v~~~~~~~l~~ll~~g~ 132 (244)
T cd04260 75 CGEIISAVVLTS---------TLRAQGLK----AVALTGAQAGILTDDN--------YS-NAKIIKVNPKKILSALKEGD 132 (244)
T ss_pred HhHHHHHHHHHH---------HHHhCCCC----eEEechHHcCEEecCC--------CC-ceeeeccCHHHHHHHHhCCC
Confidence 7887753 444 47899998 8999999988877553 22 46778889999999999999
Q ss_pred EEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHh
Q 006709 253 LVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 253 IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~ 318 (634)
|||+++. +.+.+|+++++ ++|.+|+.||.+|+||+|+|+|||||++ +++++|++|+.+|+++++..
T Consensus 133 VPVv~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~ 209 (244)
T cd04260 133 VVVVAGFQGVTEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQ 209 (244)
T ss_pred EEEecCCcccCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHc
Confidence 9999996 77888999999 6999999999999999999999999973 36899999999999888743
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet |
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=216.08 Aligned_cols=237 Identities=16% Similarity=0.179 Sum_probs=171.7
Q ss_pred EEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 006709 102 FVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (634)
Q Consensus 102 iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~ 172 (634)
+|+|||||+||+++ +++++.+|+. ..-.++|||||||+|.|..+++++++ ...+ ..++...-.+.
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGgGSFGHp~Ak~~~~~-~~~~---~~s~~G~~~~~ 76 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGGGSFGHPAAKEFGLE-GLKN---YLSPLGFSLTH 76 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecCccccCHHHHHhCcc-cccc---ccCccchHHHH
Confidence 89999999999976 4556666554 33347899999999999999999993 1111 11222222334
Q ss_pred HHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCc
Q 006709 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (634)
Q Consensus 173 ~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~ 252 (634)
.++-++|..++++ |.++|+. ++.+.+.+. .+ +.|++..-..+.++.+|+.|+
T Consensus 77 ~am~~L~~~V~~~---------l~~~Gv~----av~~~P~s~--~~-------------~~gr~~~~~l~~i~~~l~~gf 128 (252)
T COG1608 77 LAMLELNSIVVDA---------LLDAGVR----AVSVVPISF--ST-------------FNGRILYTYLEAIKDALEKGF 128 (252)
T ss_pred HHHHHHHHHHHHH---------HHhcCCc----cccccCcce--ee-------------cCCceeechHHHHHHHHHcCC
Confidence 5667788888886 5788887 443333331 11 235666666899999999999
Q ss_pred EEEEcCCc-cCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccC-HHHHHHHHHhhchhhhhHHHH
Q 006709 253 LVILSNLG-YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLT-LQEADSLIRQRVKQSEIAANY 329 (634)
Q Consensus 253 IPVv~~v~-~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls-~~e~~~li~~~~~~~~~~~~~ 329 (634)
|||+.+.. .+++....++++|+++.+||+.|+||+++|+|||||+ +.+++.++.+. .++++....-+
T Consensus 129 vPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~~~---------- 198 (252)
T COG1608 129 VPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVALG---------- 198 (252)
T ss_pred EeeeecceEEcCCCceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhhhc----------
Confidence 99999754 5555578899999999999999999999999999997 44444444443 34444332110
Q ss_pred HHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHH
Q 006709 330 VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 409 (634)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~ 409 (634)
+ ++ ...+||| |..||+++..
T Consensus 199 ----------------------------------------g----s~-------~~DVTGG---------i~~Kl~~~~~ 218 (252)
T COG1608 199 ----------------------------------------G----SG-------GTDVTGG---------IAKKLEALLE 218 (252)
T ss_pred ----------------------------------------C----cC-------cccchhh---------HHHHHHHHHH
Confidence 0 00 0247889 9999999999
Q ss_pred HHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 410 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 410 a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
..+.|.. |+|+||..++. |..++.++.+||.+.
T Consensus 219 ~~~~~~~-vyi~ng~~~~n-i~~~l~G~~vGT~I~ 251 (252)
T COG1608 219 IARYGKE-VYIFNGNKPEN-IYRALRGENVGTRID 251 (252)
T ss_pred HHhcCce-EEEECCCCHHH-HHHHhcCCCCceEec
Confidence 9999987 99999999998 566678899999875
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=249.05 Aligned_cols=251 Identities=17% Similarity=0.143 Sum_probs=172.1
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCc-hHHHHHHHHHcCCccc-ccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAK-YLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGG-G~~I~~~l~~lg~~~~-~~~G~RvT~~~~l~ 169 (634)
.+++|||+||++|++++ +.+++++|+.|++.|++||||.+| +.+.+..+...+.... +.+-.+.++...++
T Consensus 7 ~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~~~~q 86 (715)
T TIGR01092 7 VKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPELDGK 86 (715)
T ss_pred CCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCchHHHH
Confidence 58999999999999864 789999999999999999995554 4444444433222110 00001223333333
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHc
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd 249 (634)
+ .++.||. .|+..|+. .|.++++. ..++...+.+|-..+ ......++|+.||+
T Consensus 87 a-~aa~gq~--~L~~~y~~-----~f~~~~i~----~aQ~Llt~~d~~~~~---------------~~~~~~~~l~~lL~ 139 (715)
T TIGR01092 87 A-CAAVGQS--GLMALYET-----MFTQLDIT----AAQILVTDLDFRDEQ---------------FRRQLNETVHELLR 139 (715)
T ss_pred H-HHHHHHH--HHHHHHHH-----HHHHcCCe----eEEEEechhhcccHH---------------HHHHHHHHHHHHHH
Confidence 3 3455555 45666543 68888886 334333332222111 11234689999999
Q ss_pred CCcEEEEcCCccCCCC-------ceeeechHHHHHHHHHHcCCCEEEEeecccccC------CCCccccccCHHHHHHHH
Q 006709 250 GGCLVILSNLGYSSSG-------EVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~G-------ei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld------~~gklI~~ls~~e~~~li 316 (634)
.|+|||+++++...+. +-+|+|+|.+|++||.+|+||+|+|+|||||++ +++++|++++..+.+..+
T Consensus 140 ~g~iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i 219 (715)
T TIGR01092 140 MNVVPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEI 219 (715)
T ss_pred CCCEEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhh
Confidence 9999999975443221 224999999999999999999999999999973 358899998865443222
Q ss_pred HhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccccc
Q 006709 317 RQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSR 396 (634)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~ 396 (634)
..+ ..+ .+++||
T Consensus 220 ~~~-------------------------------------------------~~~-------------~~~tGG------ 231 (715)
T TIGR01092 220 TFG-------------------------------------------------TKS-------------RLGRGG------ 231 (715)
T ss_pred ccC-------------------------------------------------ccc-------------ccCCCC------
Confidence 110 001 145677
Q ss_pred ccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccccccc
Q 006709 397 LNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (634)
Q Consensus 397 ~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye 449 (634)
|.+||+||..|.+.|++ ++|++|..++. |.+++.++..||.|.++..+
T Consensus 232 ---M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~~~~~~~~ 279 (715)
T TIGR01092 232 ---MTAKVKAAVWAAYGGTP-VIIASGTAPKN-ITKVVEGKKVGTLFHEDAHL 279 (715)
T ss_pred ---chHHHHHHHHHHHCCCe-EEEeCCCCcch-HHHHhcCCCCceEecccchh
Confidence 99999999999999997 99999998887 67778888899999776544
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-23 Score=240.45 Aligned_cols=249 Identities=17% Similarity=0.147 Sum_probs=175.6
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccc---cCCc-cCCCHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY---LGRY-RITDSES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~---~~G~-RvT~~~~ 167 (634)
++++|||+||+.|++++ +.+++++|+.|++.|+++|||.+|...++ ...+++.... .... +.+....
T Consensus 15 ~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g--~~~l~~~~~~~~~~~~~~~~~~~~~ 92 (718)
T PLN02418 15 VKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVG--RQRLRYRRLVNSSFADLQKPQMELD 92 (718)
T ss_pred CCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHH--HHHHhhhhhhhcccccCCCCcchHH
Confidence 58999999999999865 78899999999999999999999954443 3444433210 0000 1121222
Q ss_pred HHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHH
Q 006709 168 LAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (634)
Q Consensus 168 l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~L 247 (634)
.+ +.+++||.. ++..|+ ..|+++|++ +.++...+.+|-..+ ......++|+.|
T Consensus 93 ~q-a~aa~Gq~~--l~~~~~-----~~f~~~g~~----~~qillT~~~~~~~~---------------~~~~~~~~l~~l 145 (718)
T PLN02418 93 GK-ACAAVGQSE--LMALYD-----TLFSQLDVT----ASQLLVTDSDFRDPD---------------FRKQLSETVESL 145 (718)
T ss_pred HH-HHHHhhHHH--HHHHHH-----HHHHHcCCe----EEEEEecHhHhcchh---------------HhHhHHHHHHHH
Confidence 22 346777765 444443 269999986 455544444333211 123456899999
Q ss_pred HcCCcEEEEcCCccCCCC-------ceeeechHHHHHHHHHHcCCCEEEEeecccccC------CCCccccccCHHHHHH
Q 006709 248 LDGGCLVILSNLGYSSSG-------EVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRFLTLQEADS 314 (634)
Q Consensus 248 Ld~G~IPVv~~v~~~~~G-------ei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld------~~gklI~~ls~~e~~~ 314 (634)
|+.|.|||+++++...+. ...|+|+|.+|++||.+++||+|+|+|||||++ +++++|++++..+.+.
T Consensus 146 l~~g~iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~ 225 (718)
T PLN02418 146 LDLRVIPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQD 225 (718)
T ss_pred HHCCCEEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhh
Confidence 999999999986543321 237889999999999999999999999999973 3478888887654333
Q ss_pred HHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccc
Q 006709 315 LIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERL 394 (634)
Q Consensus 315 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~ 394 (634)
.+..+. .+ .+.+||
T Consensus 226 ~i~~~~-------------------------------------------------~s-------------~~~tGG---- 239 (718)
T PLN02418 226 EITFGE-------------------------------------------------KS-------------RVGRGG---- 239 (718)
T ss_pred hhhccc-------------------------------------------------cc-------------ccCCCC----
Confidence 221110 01 135677
Q ss_pred ccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccccccc
Q 006709 395 SRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (634)
Q Consensus 395 ~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye 449 (634)
|.+||+||..|.+.|++ ++|++|..++. +.++++++..||.|.++..+
T Consensus 240 -----M~~Kl~Aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~~ 287 (718)
T PLN02418 240 -----MTAKVKAAVNAASAGIP-VVITSGYALDN-IRKVLRGERVGTLFHQDAHL 287 (718)
T ss_pred -----cHHHHHHHHHHHHCCCc-EEEeCCCCcch-HHHHhcCCCCceEeccccch
Confidence 99999999999999997 89999999986 66788888899999887553
|
|
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=203.55 Aligned_cols=215 Identities=19% Similarity=0.174 Sum_probs=153.5
Q ss_pred CeEEEEECCccCCCC-------C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHH-cCCcccccCCccCCCHHHHHH
Q 006709 100 GTFVVIISGEIVSSP-------Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE-RGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 100 k~iVIKLGGsvL~~~-------~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~-lg~~~~~~~G~RvT~~~~l~~ 170 (634)
+++|||+||++++++ + +++++++|+.+++.|.++|||||||++++..... .++ +...++.
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~~a~~~~~~~~~~-----------~~~~~~~ 69 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGNIFRGYIGAAAGM-----------DRATADY 69 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHhhcCC-----------ChhhHHH
Confidence 479999999999843 2 7899999999999999999999999887765321 222 1223444
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
..++..++|..++.. .|+++|++ +.-+.... ++..+. ....+.+.++|++
T Consensus 70 ~~~~~~~l~~~ll~~--------~l~~~Gi~----a~~~~~~~----------------~~~~~~--~~~~~~~~~~l~~ 119 (231)
T PRK00358 70 MGMLATVMNALALQD--------ALERAGVD----TRVQSAIP----------------MPQVAE--PYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEechhh----------------cccccC--cccHHHHHHHHHC
Confidence 444556777755543 47899987 32111111 111111 1234678899999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|.|||+++-. +. .+.++|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|+.++ +.
T Consensus 120 g~vPVv~g~~----~~-~~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~---g~--- 188 (231)
T PRK00358 120 GRVVIFAAGT----GN-PFFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK---GL--- 188 (231)
T ss_pred CCEEEEECCC----CC-CCCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc---CC---
Confidence 9999997521 11 2458999999999999999999999999973 36999999987653222 11
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
...+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T PRK00358 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------cchh
Confidence 2236
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+.++..|.+.|++ ++|+||..++. |..++.++..||.|.
T Consensus 193 ~~a~~~a~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 231 (231)
T PRK00358 193 ATAISLARDNKIP-IIVFNMNKPGN-LKRVVKGEHIGTLVS 231 (231)
T ss_pred HHHHHHHHHcCCc-EEEECCCCchH-HHHHHCCCCCCEEeC
Confidence 7788888899996 89999999987 667778888899873
|
|
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-23 Score=206.50 Aligned_cols=176 Identities=20% Similarity=0.222 Sum_probs=141.2
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhHH-
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGI- 178 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~i- 178 (634)
++|||+||+++.+++ ++.++++|+.+ +.|.++||||||++.++..+..+. .+++.|+.
T Consensus 1 ~iViK~GGs~l~~~~~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~-------------------~~~s~Ge~~ 60 (227)
T cd04234 1 MVVQKFGGTSVASAERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA-------------------LLLSFGERL 60 (227)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH-------------------HHHHHHHHH
Confidence 479999999998876 89999999999 889999999999887766554432 23445544
Q ss_pred HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC-CcEEEEc
Q 006709 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG-GCLVILS 257 (634)
Q Consensus 179 n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~-G~IPVv~ 257 (634)
+..++.. .|+++|++ +..+++.+..+... ++++.+++..++.+.|+++++. |.|||++
T Consensus 61 ~~~l~~~--------~l~~~Gi~----a~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~ 119 (227)
T cd04234 61 SARLLAA--------ALRDRGIK----ARSLDARQAGITTD---------DNHGAARIIEISYERLKELLAEIGKVPVVT 119 (227)
T ss_pred HHHHHHH--------HHHHCCCC----eEEeCHHHCCEEcC---------CccchhhHHHHHHHHHHHHHhhCCCEEEec
Confidence 5555554 48899998 77777766544432 3345666777889999999999 9999999
Q ss_pred C-CccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHH
Q 006709 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 258 ~-v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~ 317 (634)
+ ++.+.+|++.++ ++|.+|+.+|.+|+||+|+|+|||||++ +++++|++++.+|++++..
T Consensus 120 g~i~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~ 190 (227)
T cd04234 120 GFIGRNEDGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAY 190 (227)
T ss_pred CceecCCCCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHh
Confidence 8 567778888877 7999999999999999999999999973 3689999999999888753
|
AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd |
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=202.91 Aligned_cols=214 Identities=18% Similarity=0.160 Sum_probs=155.6
Q ss_pred eEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHH-HHHHHcCCcccccCCccCCCHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQID-KLLSERGHEAKYLGRYRITDSESLAAAM 172 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~-~~l~~lg~~~~~~~G~RvT~~~~l~~~~ 172 (634)
++|||+||+++++++ ++.+++.|+.+.+.|.++|||||||++++ .....+++. +..++...
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~~~~~~-----------~~~~~~~~ 69 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMP-----------RATADYIG 69 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHhhcCCC-----------hhhHHHHH
Confidence 589999999998852 78899999999888999999999888643 332333322 11233333
Q ss_pred HHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCc
Q 006709 173 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 252 (634)
Q Consensus 173 ~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~ 252 (634)
.+...+|..+++. .|.++|++ +..+++.+-.. .....+.+.+..+++.|.
T Consensus 70 ~~~~~l~~~l~~~--------~l~~~Gi~----a~~~~~~~~~~------------------~~~~~~~~~l~~~l~~g~ 119 (229)
T cd04239 70 MLATVMNALALQD--------ALEKLGVK----TRVMSAIPMQG------------------VAEPYIRRRAIRHLEKGR 119 (229)
T ss_pred HHHHHHHHHHHHH--------HHHHcCCC----EEEeCHHHHhh------------------hhccccHHHHHHHHhCCC
Confidence 3344566666654 47889987 55544432110 012346788999999999
Q ss_pred EEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhh
Q 006709 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEI 325 (634)
Q Consensus 253 IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~ 325 (634)
|||+++.. | ..+.++|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|+.++..
T Consensus 120 ipVi~g~~----g-~~~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-------- 186 (229)
T cd04239 120 IVIFGGGT----G-NPGFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-------- 186 (229)
T ss_pred EEEEeCcc----C-CCCCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc--------
Confidence 99999764 2 23458999999999999999999999999973 3589999999877665421
Q ss_pred HHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHH
Q 006709 326 AANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELA 405 (634)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~ 405 (634)
|..++.
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (229)
T cd04239 187 --------------------------------------------------------------------------KVMDAT 192 (229)
T ss_pred --------------------------------------------------------------------------CCccHH
Confidence 223355
Q ss_pred HHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 406 AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 406 AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
++..+.+.|++ ++|++|..++. +.+++.++..||.|.
T Consensus 193 a~~~~~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 229 (229)
T cd04239 193 ALTLCRRNKIP-IIVFNGLKPGN-LLRALKGEHVGTLIE 229 (229)
T ss_pred HHHHHHHCCCe-EEEECCCChhH-HHHHHcCCCCCeEeC
Confidence 67778888986 99999999987 677788778899873
|
Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als |
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=220.05 Aligned_cols=193 Identities=16% Similarity=0.180 Sum_probs=156.3
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEe-----CchHHHHHHHHHcCCcccccCCccCCCHHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVP-----GTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVH-----GGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~ 172 (634)
|+++|||+||+++++++ +..++++|+.+.+.|+++|||| ||+|+++..+..+..... +.++...++.+
T Consensus 1 m~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~-----~~~~~~~~~~l- 74 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEERRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF-----SEISKREQDLL- 74 (403)
T ss_pred CCeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc-----cCCChHHHHHH-
Confidence 47899999999999877 7899999999999999999888 677778776655433221 33566666654
Q ss_pred HHHhHHHHH-HHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCC
Q 006709 173 EAAGGIRMM-IEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (634)
Q Consensus 173 ~a~G~in~~-Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G 251 (634)
.+.|+++.. ++.. .|+++|++ ++++++.+..+++.++ ++ .+++..++.+.|+.+++.|
T Consensus 75 ~~~Ge~~s~~~~~~--------~l~~~Gi~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~l~~~l~~~ 133 (403)
T PRK08210 75 MSCGEIISSVVFSN--------MLNENGIK----AVALTGGQAGIITDDN--------FT-NAKIIEVNPDRILEALEEG 133 (403)
T ss_pred HhHhHHHHHHHHHH--------HHHhCCCC----eEEechHHccEEccCC--------CC-ceeeehhhHHHHHHHHhcC
Confidence 678888754 3332 47899998 8899988877777553 22 3677788899999999999
Q ss_pred cEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHh
Q 006709 252 CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 252 ~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~ 318 (634)
.|||+++. +.+.+|+++++ ++|.+|+.||.+|+||+++|+|||||++ +++++|++++.+|+.+++..
T Consensus 134 ~vpVi~G~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~ 211 (403)
T PRK08210 134 DVVVVAGFQGVTENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQ 211 (403)
T ss_pred CEEEeeCeeecCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHC
Confidence 99999997 67888999888 7999999999999999999999999973 36999999999999988754
|
|
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=197.63 Aligned_cols=147 Identities=39% Similarity=0.738 Sum_probs=140.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgq 528 (634)
++||.|+.+|++.|.+++.++...+.+++++.+.++..++.|+|++++|+++||+++.|+.+++.+|+.+|+|||+|||+
T Consensus 1 ~~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~ 80 (153)
T COG1246 1 EQIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGS 80 (153)
T ss_pred CceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCC
Confidence 36999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred CHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhcc
Q 006709 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 608 (634)
Q Consensus 529 GiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~ 608 (634)
|+|..|| ++++..|++.|++.+|+.||.+.+||+++||...+...+|+..|+.++
T Consensus 81 G~G~~Ll-------------------------~~~~~~Ar~~gi~~lf~LTt~~~~~F~~~GF~~vd~~~LP~~~~~~~~ 135 (153)
T COG1246 81 GRGERLL-------------------------ERLLADARELGIKELFVLTTRSPEFFAERGFTRVDKDELPEEVWSSYN 135 (153)
T ss_pred CcHHHHH-------------------------HHHHHHHHHcCCceeeeeecccHHHHHHcCCeECccccCCHHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999
Q ss_pred CC-CCceEEEeec
Q 006709 609 LS-RNSKYYMKKL 620 (634)
Q Consensus 609 ~~-~~s~~~~k~l 620 (634)
+. +.+++.+..+
T Consensus 136 ~~~~~~~~~~~~~ 148 (153)
T COG1246 136 FCERRSKCLAFDL 148 (153)
T ss_pred hhhhhhhHHHHHH
Confidence 98 7787766544
|
|
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=201.61 Aligned_cols=212 Identities=21% Similarity=0.235 Sum_probs=151.8
Q ss_pred CeEEEEECCccCCCCC---hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHH
Q 006709 100 GTFVVIISGEIVSSPY---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAME 173 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~---l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~---~lg~~~~~~~G~RvT~~~~l~~~~~ 173 (634)
..+|||||||+|++++ +.+++++|+.+.+ +++++||||||++.+...+ .+|++ ...++....
T Consensus 31 ~~~ViKiGGSvitdk~~~~i~~la~~i~~~~~-~~~vilV~GGG~~~r~~~~~~~~~g~~-----------~~~~~~~~~ 98 (262)
T cd04255 31 DLNVVKIGGQSIIDRGAEAVLPLVEEIVALRP-EHKLLILTGGGTRARHVYSIGLDLGMP-----------TGVLAKLGA 98 (262)
T ss_pred CcEEEEeccceecCCcHHHHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHHHHHHcCCC-----------chHHHHHHH
Confidence 5699999999999876 7899999999876 7899999999998854321 23332 122323333
Q ss_pred HHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcE
Q 006709 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (634)
Q Consensus 174 a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~I 253 (634)
++..+|..++.. .|..+|++ ++ ...+...++.+|+.|+|
T Consensus 99 aa~~ln~lv~~~--------~l~~~g~~----~i-----------------------------~~~~~~~l~~lL~~g~v 137 (262)
T cd04255 99 SVSEQNAEMLAT--------LLAKHGGS----KV-----------------------------GHGDLLQLPTFLKAGRA 137 (262)
T ss_pred HHHHHHHHHHHH--------HHHHcCCC----cc-----------------------------ccccHHHHHHHHHCCCe
Confidence 445556555543 35677765 11 11244579999999999
Q ss_pred EEEcCCcc-------CCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhh
Q 006709 254 VILSNLGY-------SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 254 PVv~~v~~-------~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~ 319 (634)
||++++.. +..|...++|+|.+|+++|.+|+||+|+++|||||++ +++++|++++.+++.++....
T Consensus 138 PVi~g~~~~~~~~i~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~ 217 (262)
T cd04255 138 PVISGMPPYGLWEHPAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD 217 (262)
T ss_pred EEEeCCcCCCeeeecCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC
Confidence 99998742 1224567999999999999999999999999999973 368999999987665442100
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
. + ..||
T Consensus 218 ~---------------------------------------------------------~--------~~~~--------- 223 (262)
T cd04255 218 L---------------------------------------------------------V--------LERP--------- 223 (262)
T ss_pred C---------------------------------------------------------C--------CcHH---------
Confidence 0 0 0233
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+|+++| .++..++|+||+.++. |.+++.++..||.|.
T Consensus 224 ~~~~l~aa-----~~~~~v~I~~g~~~~~-L~~~l~g~~~GT~i~ 262 (262)
T cd04255 224 VLDLLQNA-----RHVKEVQIVNGLVPGN-LTRALRGEHVGTIIR 262 (262)
T ss_pred HHHHHHHh-----CCCCcEEEEeCCCCCH-HHHHHcCCCCceEeC
Confidence 88888876 2333599999999987 677788888999873
|
The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=197.47 Aligned_cols=216 Identities=19% Similarity=0.199 Sum_probs=150.8
Q ss_pred CeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
+++|||+|||+|++++ +++++++|+.+++.|+++|||||||.+.. .....++ +....+.+
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs~~~-g~~~~~~-----------~~~~~d~i 68 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGNLFR-GVELKEL-----------SPTRADQI 68 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccHHHH-HHhccCC-----------ChHHHHHH
Confidence 5799999999998763 68899999999999999999999987643 2111111 12222332
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G 251 (634)
......+|..++.. .|.++|++ ++.+.. ++.. +.+...+.+.++.+|+.|
T Consensus 69 g~~~~~ln~~~~~~--------~l~~~gi~----a~~~~~----~~~~--------------~~~~~~~~~~i~~ll~~g 118 (231)
T PRK14558 69 GMLGTVINALYLKD--------IFEKSGLK----AVIVSQ----IVNL--------------PSVEPINYDDIELYFRAG 118 (231)
T ss_pred HHHHHHHHHHHHHH--------HHHHcCCC----eEEecc----cccc--------------chhhhhhHHHHHHHHHCC
Confidence 22222334333232 47899987 444432 1110 111123478999999999
Q ss_pred cEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhchhhh
Q 006709 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVKQSE 324 (634)
Q Consensus 252 ~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~~~~~ 324 (634)
.|||+++.. +..++++|.+|+.+|..|+||.|+++|||||+ | +++++|++++.+|+.++ +.+
T Consensus 119 ~vpV~~G~~-----~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g~~--- 187 (231)
T PRK14558 119 YIVIFAGGT-----SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---GLK--- 187 (231)
T ss_pred CEEEEECCC-----CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---Ccc---
Confidence 999999753 13366899999999999999999999999997 2 35899999997655432 110
Q ss_pred hHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHH
Q 006709 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (634)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl 404 (634)
. | +.
T Consensus 188 -----------------------------------------------------~---------------------~--d~ 191 (231)
T PRK14558 188 -----------------------------------------------------V---------------------M--DT 191 (231)
T ss_pred -----------------------------------------------------c---------------------c--cH
Confidence 0 2 24
Q ss_pred HHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 405 ~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
.|+..|.+.|++ ++|+|+..++. |..++.++..||.|.++
T Consensus 192 ~a~~~a~~~gi~-v~I~ng~~~~~-l~~~l~g~~~GT~i~~~ 231 (231)
T PRK14558 192 EAFSICKKYGIT-ILVINFFEPGN-LLKALKGENVGTLVVPD 231 (231)
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCH-HHHHHCCCCCcEEeCCC
Confidence 566777788997 89999999987 45666778899999764
|
|
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=211.99 Aligned_cols=191 Identities=18% Similarity=0.222 Sum_probs=151.3
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGG-G~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G 176 (634)
|+++|||+||+++.+++ +++++++|+.+.+.|.++|||||| |+.++.+++....... .++...++.+ .+.|
T Consensus 1 m~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~~------~~~~~~~~~~-~~~G 73 (404)
T PRK06635 1 MALIVQKFGGTSVGDVERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVSP------LPDPRELDML-LSTG 73 (404)
T ss_pred CCeEEEeECCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhcc------CCCHHHHHHH-hhhh
Confidence 46899999999999876 899999999999889999988886 6777777665432111 1255666654 3446
Q ss_pred -HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 177 -GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 177 -~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
.++..++.. .|+++|++ ++.+++.+..+++..+ |+ .+++..++.+.|+.+++.|.|||
T Consensus 74 e~~~~~~~~~--------~l~~~g~~----a~~l~~~~~~~~~~~~--------~~-~~~~~~~~~~~l~~~l~~~~ipV 132 (404)
T PRK06635 74 EQVSVALLAM--------ALQSLGVK----ARSFTGWQAGIITDSA--------HG-KARITDIDPSRIREALDEGDVVV 132 (404)
T ss_pred HHHHHHHHHH--------HHHhCCCC----eEEeChhhCCEEecCC--------CC-ceEeeecCHHHHHHHHhCCCEEE
Confidence 455544443 47899998 7888888776666442 32 46788889999999999999999
Q ss_pred EcC-CccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHH
Q 006709 256 LSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 256 v~~-v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~ 317 (634)
+++ ++.+.+|+++++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++..
T Consensus 133 i~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~ 205 (404)
T PRK06635 133 VAGFQGVDEDGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELAS 205 (404)
T ss_pred ecCccEeCCCCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHH
Confidence 998 477888999988 9999999999999999999999999973 3689999999999888753
|
|
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=197.25 Aligned_cols=215 Identities=20% Similarity=0.190 Sum_probs=152.9
Q ss_pred CeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHH-HHHHHHcCCcccccCCccCCCHHHHHH
Q 006709 100 GTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I-~~~l~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
+++|||+|||++++++ +.+++++|+.+...|.++|||||||+++ +...+.++ +.+.+. +.
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~-------~~~~~~----d~ 69 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAG-------MDRATA----DY 69 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcC-------CCchhh----hH
Confidence 5799999999998542 6789999999888889999999999875 11122222 223221 22
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
+.....++|..++.. .|+++|++ +..+++.+-+ ..+ ..++.+.++.+|+.
T Consensus 70 ~g~~~~~~n~~ll~~--------~L~~~Gv~----a~~l~~~~~~----------------~~~--~~~~~~~l~~~l~~ 119 (231)
T cd04254 70 MGMLATVINALALQD--------ALESLGVK----TRVMSAIPMQ----------------GVA--EPYIRRRAIRHLEK 119 (231)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----eEEEcHHHhh----------------hhh--cccCHHHHHHHHHC
Confidence 323455667644443 47889987 5555544321 111 24678999999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|.|||+++. .| ...+++|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|+... +.
T Consensus 120 g~ipV~~g~----~G-~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~~---~~--- 188 (231)
T cd04254 120 GRVVIFAGG----TG-NPFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLSK---GL--- 188 (231)
T ss_pred CCEEEEECC----cC-CCCCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHhc---ch---
Confidence 999999832 22 23558999999999999999999999999972 36889999997765321 11
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
..-+
T Consensus 189 ----------------------------------------------------------------------------~~~d 192 (231)
T cd04254 189 ----------------------------------------------------------------------------KVMD 192 (231)
T ss_pred ----------------------------------------------------------------------------hhhH
Confidence 1124
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+.++..|.+.|++ ++|++|..++. |..++.++..||.|.
T Consensus 193 ~~a~~~a~~~gi~-~~I~~g~~~~~-l~~~l~g~~~GT~i~ 231 (231)
T cd04254 193 ATAFTLCRDNNLP-IVVFNINEPGN-LLKAVKGEGVGTLIS 231 (231)
T ss_pred HHHHHHHHHCCCe-EEEEeCCCccH-HHHHHCCCCCCEEeC
Confidence 6677778888997 89999999987 556667778999873
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be |
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=205.80 Aligned_cols=193 Identities=17% Similarity=0.235 Sum_probs=151.8
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~ 177 (634)
|+++|+|+||+.+.+++ ++.++++|+.+.+.|.++||||||++.....+..+.... .+++++.+++++.+....
T Consensus 1 m~~~V~KfGGtsv~~~~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~-----~~~~~~~~~d~l~s~GE~ 75 (392)
T PRK08841 1 MPLIVQKFGGTSVGSIERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQV-----DSVPTARELDVLLSAGEQ 75 (392)
T ss_pred CCeEEEeECcccCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhh-----ccCCCHHHHHHHHHHHHH
Confidence 46899999999998876 899999999999999999999999874444333333321 155677778776444333
Q ss_pred HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEc
Q 006709 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (634)
Q Consensus 178 in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~ 257 (634)
+...+++. .|++.|++ +..+++.+..+++... + ..+++..++.+.|+++++.|.|||++
T Consensus 76 ~s~~lla~--------~L~~~Gi~----a~~l~~~~~~i~t~~~--------~-~~~~i~~~~~~~i~~ll~~~~vpVv~ 134 (392)
T PRK08841 76 VSMALLAM--------TLNKLGYA----ARSLTGAQANIVTDNQ--------H-NDATIKHIDTSTITELLEQDQIVIVA 134 (392)
T ss_pred HHHHHHHH--------HHHhCCCC----eEEEehhHcCEEecCC--------C-CCceechhhHHHHHHHHhCCCEEEEe
Confidence 44555554 48899998 7888887765555321 1 13677778889999999999999999
Q ss_pred CC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 258 NL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 258 ~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
+. +.+.+|++.++ ++|.+|+.+|.+|+||.|+++|||||+ | +++++|++++.+|+.++..
T Consensus 135 Gf~g~~~~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~ 205 (392)
T PRK08841 135 GFQGRNENGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMAR 205 (392)
T ss_pred CCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHh
Confidence 85 67888998888 999999999999999999999999997 3 4689999999999888754
|
|
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.4e-21 Score=207.22 Aligned_cols=192 Identities=19% Similarity=0.223 Sum_probs=150.4
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH-H
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-I 178 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~-i 178 (634)
++|+|+||+++.+++ +++++++|+.+++.|.++||||||++.++..+.+++...- ..++++.+. +.+. ++|+ +
T Consensus 2 ~iViK~GGs~~~~~~~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~---~~~~~~~~~-~~i~-~~Ge~~ 76 (401)
T TIGR00656 2 LIVQKFGGTSVGSGERIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAI---RDAITPRER-DELV-SHGERL 76 (401)
T ss_pred cEEEEECCcCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHh---ccCCChHHH-HHHh-hHHHHH
Confidence 589999999999877 8999999999999999999999999888887665542100 013444433 3332 2355 4
Q ss_pred HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH-HHHHHHHcCCcEEEEc
Q 006709 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILS 257 (634)
Q Consensus 179 n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~-~~I~~LLd~G~IPVv~ 257 (634)
+..++.. .|+++|++ ++++++.+..+++..+ ++ .+++..++. +.|+.+++.|.|||++
T Consensus 77 s~~~~~~--------~l~~~g~~----a~~l~~~~~~~~t~~~--------~~-~~~~~~~~~~~~l~~~l~~~~vpVi~ 135 (401)
T TIGR00656 77 SSALFSG--------ALRDLGVK----AIWLDGGEAGIITDDN--------FG-NAKIDIIATEERLLPLLEEGIIVVVA 135 (401)
T ss_pred HHHHHHH--------HHHhCCCc----eEEeccccceEEeCCC--------CC-ceEeeecchHHHHHHHHhCCCEEEec
Confidence 3433333 47899998 8999988887777543 22 256777888 9999999999999999
Q ss_pred C-CccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHh
Q 006709 258 N-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 258 ~-v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~ 318 (634)
+ ++.+..|+..++ ++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.+++..
T Consensus 136 g~~~~~~~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~ 207 (401)
T TIGR00656 136 GFQGATEKGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATF 207 (401)
T ss_pred CcceeCCCCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHc
Confidence 8 577778888876 6999999999999999999999999973 36899999999999998754
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases. |
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-20 Score=188.09 Aligned_cols=215 Identities=20% Similarity=0.181 Sum_probs=150.7
Q ss_pred CeEEEEECCccCCCC-----C---hHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHHH
Q 006709 100 GTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 100 k~iVIKLGGsvL~~~-----~---l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
+++|||+|||+|+++ + ++++++.|+.+...|+++|||||||++.... .++++.... .. +.
T Consensus 2 ~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~a~~~~~~~~--------~~---d~ 70 (233)
T TIGR02075 2 KRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVSAKELGIDRV--------TA---DY 70 (233)
T ss_pred CEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHHHHhcCCCCc--------cH---HH
Confidence 589999999999852 1 6789999998888889999999999764322 355554321 11 22
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
.......++..++.. .|.++|++ +..+++.+-. + .....+.+.++.+|++
T Consensus 71 ~g~~~~~l~~~l~~~--------~L~~~Gi~----a~~l~~~~~~-----~-------------~~~~~~~~~i~~ll~~ 120 (233)
T TIGR02075 71 MGMLATVINGLALRD--------ALEKLGVK----TRVLSAISMP-----Q-------------ICESYIRRKAIKHLEK 120 (233)
T ss_pred HHHHHHHHHHHHHHH--------HHHhCCCC----cEEeccccCC-----C-------------CccccCHHHHHHHHHC
Confidence 222222345444332 47889987 5555544311 0 0012346899999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeec-cccc---C----CCCccccccCHHHHHHHHHhhchh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPIL---D----ESGHLIRFLTLQEADSLIRQRVKQ 322 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTD-Vdgl---d----~~gklI~~ls~~e~~~li~~~~~~ 322 (634)
|.|||++... | ..++++|.+|+.||..|+||+|+|+|| |||+ | +++++|++++.+|+... +.
T Consensus 121 g~VpV~~g~~----g-~~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~~-- 190 (233)
T TIGR02075 121 GKVVIFSGGT----G-NPFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---NL-- 190 (233)
T ss_pred CCEEEEECCC----C-CCCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---CH--
Confidence 9999987431 2 246889999999999999999999999 9997 2 35889999997764321 11
Q ss_pred hhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHH
Q 006709 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (634)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~ 402 (634)
...
T Consensus 191 -----------------------------------------------------------------------------~~~ 193 (233)
T TIGR02075 191 -----------------------------------------------------------------------------KVM 193 (233)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 012
Q ss_pred HHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 403 Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
++.++..|.+.|++ ++|++|..++. |..++.++..||.|.
T Consensus 194 d~~~~~~a~~~~i~-v~i~~g~~~~~-l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 194 DLTAFALARDNNLP-IVVFNIDEPGA-LKKVILGKGIGTLVS 233 (233)
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCcch-HHHHHCCCCCCEEeC
Confidence 35677778888996 89999998987 556667888999873
|
This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. |
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=185.89 Aligned_cols=209 Identities=16% Similarity=0.158 Sum_probs=148.3
Q ss_pred EEEEECCccCCCC---C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHhH
Q 006709 102 FVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG 177 (634)
Q Consensus 102 iVIKLGGsvL~~~---~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G~ 177 (634)
+|||+||++|+++ + +.+++++|+.+... +++|||||||.+++.+.+.. ..+ . .....++........
T Consensus 1 iViKlGGs~l~~~~~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~a~~~~~~~---~~~----~-~~~~~~~~~g~~~~~ 71 (221)
T TIGR02076 1 IVISLGGSVLSPEIDAEFIKEFANILRKLSDE-HKVGVVVGGGKTARRYIGVA---REL----G-ASETFLDEIGIDATR 71 (221)
T ss_pred CEEEechhhcCCCCCHHHHHHHHHHHHHHHhC-CeEEEEECCcHHHHHHHHHH---HHc----C-CCHHHHHHhhhHHHH
Confidence 5999999999885 2 78999999988766 89999999999875543211 000 0 122244444344567
Q ss_pred HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEc
Q 006709 178 IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257 (634)
Q Consensus 178 in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~ 257 (634)
+|..+++.+ |...+++ .+. .+.....++++.|.|||+.
T Consensus 72 ln~~~l~~l--------l~~~~~~----~~~------------------------------~~~~~~~~~l~~g~ipv~~ 109 (221)
T TIGR02076 72 LNAMLLIAA--------LGDDAYP----KVP------------------------------ENFEEALEAMSLGKIVVMG 109 (221)
T ss_pred HHHHHHHHH--------HHhcCCC----CcC------------------------------CCHHHHHHHHHcCCEEEEc
Confidence 777666653 4444544 110 1223446678899999998
Q ss_pred CCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHHHHH
Q 006709 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYV 330 (634)
Q Consensus 258 ~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~ 330 (634)
+.. . .+++|.+|+++|.+|+||+|+|+|||||++ +++++|++++.+|+.++..+.
T Consensus 110 G~~---~----~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~----------- 171 (221)
T TIGR02076 110 GTH---P----GHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGSS----------- 171 (221)
T ss_pred CCC---C----CCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcCC-----------
Confidence 742 1 378999999999999999999999999973 368999999988877764211
Q ss_pred HhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHH
Q 006709 331 KAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV 410 (634)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a 410 (634)
.+++|. + |..++.++..+
T Consensus 172 -----------------------------------------~~~~g~------------~---------~~~~~~a~~~~ 189 (221)
T TIGR02076 172 -----------------------------------------SVKAGS------------N---------EVVDPLAAKII 189 (221)
T ss_pred -----------------------------------------CccCCC------------C---------ceeHHHHHHHH
Confidence 111211 2 67788888888
Q ss_pred HHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 411 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 411 ~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
.+.|++ ++|++|..++.|+ .++.++..||.|
T Consensus 190 ~~~~i~-v~I~~g~~~~~l~-~~l~g~~~GT~i 220 (221)
T TIGR02076 190 ERSKIR-TIVVNGRDPENLE-KVLKGEHVGTII 220 (221)
T ss_pred HHCCCc-EEEECCCCccHHH-HHHCCCCCCeEe
Confidence 888886 9999999998755 567777889987
|
This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP. |
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-20 Score=210.96 Aligned_cols=192 Identities=18% Similarity=0.233 Sum_probs=146.1
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGG-G~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G 176 (634)
|+++|+|+||+++.+++ ++.++++|+.+.+.|.++|||||+ |...+.+. +++.... .-.+...++.+....+
T Consensus 1 m~~iViKfGGss~~~~~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~-~~~~~~t-----~~~~~~~~~~~ls~Ge 74 (587)
T PRK07431 1 MALIVQKFGGTSVGSVERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELV-KLAKEIS-----SNPPRREMDMLLSTGE 74 (587)
T ss_pred CCeEEEEECchhcCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHH-HHHHHhc-----cCCCHHHHHHHHHHhH
Confidence 46899999999998866 899999999999999999999996 44444443 4432110 0123334444433334
Q ss_pred HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEE
Q 006709 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (634)
Q Consensus 177 ~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv 256 (634)
.++..+++. .|+++|++ ++++++.+..+++... ++ .+++..++.+.|+++++.|.|||+
T Consensus 75 ~~s~~l~~~--------~l~~~gi~----a~~l~~~~~~~~~~~~--------~~-~~~i~~~~~~~l~~~l~~g~vpVv 133 (587)
T PRK07431 75 QVSIALLSM--------ALHELGQP----AISLTGAQVGIVTESE--------HG-RARILEIKTDRIQRHLDAGKVVVV 133 (587)
T ss_pred HHHHHHHHH--------HHHHCCCC----eEEechhHcCeEecCC--------CC-ceeeeeccHHHHHHHHhCCCeEEe
Confidence 566667654 47899998 8999988877766442 23 378888899999999999999999
Q ss_pred cCC-cc--CCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC---C----CCccccccCHHHHHHHHH
Q 006709 257 SNL-GY--SSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 257 ~~v-~~--~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld---~----~gklI~~ls~~e~~~li~ 317 (634)
++. +. ...|++.++ ++|.+|+.+|.+|+||+|+++|||||++ | ++++|++++.+|+.++..
T Consensus 134 ~g~~g~~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~ 207 (587)
T PRK07431 134 AGFQGISLSSNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELAS 207 (587)
T ss_pred cCCcCCCCCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHh
Confidence 975 43 344777765 8999999999999999999999999973 3 689999999999988863
|
|
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-20 Score=184.81 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=150.1
Q ss_pred eEEEEECCccCCCC---C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 006709 101 TFVVIISGEIVSSP---Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (634)
Q Consensus 101 ~iVIKLGGsvL~~~---~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G 176 (634)
++|||||||+++++ + +.++++.|+.+.. |.++|||||||++++.+.+.... +.. +...++.......
T Consensus 1 ~iViKlGGs~l~~~~~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~~a~~~~~~~~~-------~~~-~~~~~d~~g~~~~ 71 (221)
T cd04253 1 RIVISLGGSVLAPEKDADFIKEYANVLRKISD-GHKVAVVVGGGRLAREYISVARK-------LGA-SEAFLDEIGIMAT 71 (221)
T ss_pred CEEEEeccceeCCCCChHHHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHHH-------cCC-CHHHHHHhcCHHH
Confidence 57999999999874 2 7888999988765 78999999999998776443210 001 1122333323344
Q ss_pred HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEE
Q 006709 177 GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 256 (634)
Q Consensus 177 ~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv 256 (634)
.+|..+++.+ ..+|++ ++. ++.+.+.++|+.|.|||+
T Consensus 72 ~ln~~~~~~~---------l~~~~~----~~~------------------------------~~~~~~~~~l~~g~vpv~ 108 (221)
T cd04253 72 RLNARLLIAA---------LGDAYP----PVP------------------------------TSYEEALEAMFTGKIVVM 108 (221)
T ss_pred HHHHHHHHHH---------HhcCCC----cCC------------------------------CCHHHHHHHHHcCCeEEE
Confidence 6676666653 234543 111 135677889999999999
Q ss_pred cCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHHHH
Q 006709 257 SNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANY 329 (634)
Q Consensus 257 ~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~~~~~ 329 (634)
.+... .+++|.+|+.+|.+|+||+|+++|||||++ +++++|++++.+|+.++....
T Consensus 109 ~G~~~-------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~---------- 171 (221)
T cd04253 109 GGTEP-------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS---------- 171 (221)
T ss_pred ECCCC-------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC----------
Confidence 97532 357899999999999999999999999972 358999999988877664210
Q ss_pred HHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHH
Q 006709 330 VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 409 (634)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~ 409 (634)
.+..| + .|..++.++..
T Consensus 172 ------------------------------------------~~~~g-------------~--------~~~~d~~a~~~ 188 (221)
T cd04253 172 ------------------------------------------SWKAG-------------S--------NEPFDPLAAKI 188 (221)
T ss_pred ------------------------------------------CcCCC-------------C--------CcchHHHHHHH
Confidence 01111 1 15678888999
Q ss_pred HHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 410 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 410 a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
+.+.|++ ++|++|..++. |.++++++..||.|
T Consensus 189 ~~~~gi~-~~I~~g~~p~~-l~~~l~g~~~GT~I 220 (221)
T cd04253 189 IERSGIK-TIVVDGRDPEN-LERALKGEFVGTII 220 (221)
T ss_pred HHHCCCe-EEEECCCCccH-HHHHHCCCCCCeEe
Confidence 9999997 89999998986 66778888899987
|
The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi |
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=173.68 Aligned_cols=149 Identities=19% Similarity=0.197 Sum_probs=105.7
Q ss_pred EEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHHHHhHHH
Q 006709 103 VVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179 (634)
Q Consensus 103 VIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~---~lg~~~~~~~G~RvT~~~~l~~~~~a~G~in 179 (634)
|||||||.+.+ +..+.+.|+.+. |.+++||.|||++++.+.. ++|+ +....+.....+..+|
T Consensus 1 vvKiGGsl~~~--~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r~~~~~~g~-----------~~~~ad~mgilat~~n 65 (203)
T cd04240 1 VVKIGGSLIRE--AVRLLRWLKTLS--GGGVVIVPGGGPFADVVRRYQERKGL-----------SDAAAHWMAILAMEQY 65 (203)
T ss_pred CEEEccccccc--HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHHHHHHHcCC-----------ChHHHHHHHHHHHHHH
Confidence 79999999865 556666665553 8899999999999766543 3333 2333333322333344
Q ss_pred HHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCC
Q 006709 180 MMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259 (634)
Q Consensus 180 ~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v 259 (634)
-.+.+... . + . ..-+...+.+++..|.|||+.|.
T Consensus 66 a~~l~~~~--------~----~--------------~--------------------~~~~~~~~~~~~~~g~ipV~~P~ 99 (203)
T cd04240 66 GYLLADLE--------P----R--------------L--------------------VARTLAELTDVLERGKIAILLPY 99 (203)
T ss_pred HHHHhccC--------C----c--------------c--------------------ccCCHHHHHHHHHCCCcEEEeCc
Confidence 33322110 0 0 0 01134688889999999999998
Q ss_pred cc----CCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHH
Q 006709 260 GY----SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEA 312 (634)
Q Consensus 260 ~~----~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~ 312 (634)
.. +..++.+|+|+|.+|+++|.+|+|++||++|||||++ .++++|++++..|+
T Consensus 100 ~~~~~~~~~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~da~~i~~i~~~e~ 157 (203)
T cd04240 100 RLLLDTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKDGKLVNEIAAAEL 157 (203)
T ss_pred hhhcccCCCCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCcCccccCHHHh
Confidence 65 4567789999999999999999999999999999974 56999999987654
|
Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily. |
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=170.85 Aligned_cols=217 Identities=18% Similarity=0.196 Sum_probs=150.9
Q ss_pred CCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHH-HHHHHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I-~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
.+++|||+||++|.+++ ++.+++.|+.+.+.|+++|||||||... ...++++++ +...+|
T Consensus 4 ~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~a~~~~~-----------~~~~~D 72 (247)
T PRK14557 4 YKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGI-----------DRVEAD 72 (247)
T ss_pred ccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHHHHhcCC-----------ChHHHH
Confidence 37899999999998742 7889999999989999999999998633 344555543 233446
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhc-CCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRH-GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~-Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
.+.....++|..+... .|+.. +.. ++ +++.. .+......++...+...|
T Consensus 73 ~ig~~g~~lna~ll~~--------~l~~~~~~~-----~~-------i~t~~----------~~~~~~~~~~~~~~~~~l 122 (247)
T PRK14557 73 NIGTLGTIINSLMLRG--------VLTSKTNKE-----VR-------VMTSI----------PFNAVAEPYIRLRAVHHL 122 (247)
T ss_pred HHHHHHHHHHHHHHHH--------HHHhhhCCc-----ee-------EEecc----------ccccccchhhHHHHHHHH
Confidence 6555667777666654 24432 322 11 22211 111112234445577779
Q ss_pred cCCcEEEEcCC-ccCCCCceeeechHHHHHHHHHHcCCCEEEEe-eccccc---C----CCCccccccCHHHHHHHHHhh
Q 006709 249 DGGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 249 d~G~IPVv~~v-~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~L-TDVdgl---d----~~gklI~~ls~~e~~~li~~~ 319 (634)
++|.|||+.+. +. -.+++|.+|+.+|..++||.|+++ |||||+ | |++++|++++..|+. ..+
T Consensus 123 ~~g~VvV~~G~~g~------~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~---~~~ 193 (247)
T PRK14557 123 DNGYIVIFGGGNGQ------PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVV---RQN 193 (247)
T ss_pred hCCCEEEEECCcCC------CccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhc---ccC
Confidence 99999999763 22 245699999999999999999999 599997 2 368999999976541 111
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
. . -
T Consensus 194 ~---------------------------------------------------------~--------------------~ 196 (247)
T PRK14557 194 I---------------------------------------------------------Q--------------------V 196 (247)
T ss_pred H---------------------------------------------------------H--------------------H
Confidence 0 0 0
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|. ..|+..|.+.|++ ++|+||..++. |..++.++..||.|.+.
T Consensus 197 ~~--~~A~~~a~~~gi~-v~I~ng~~~~~-l~~~l~g~~~GT~i~~~ 239 (247)
T PRK14557 197 MD--QAALLLARDYNLP-AHVFNFDEPGV-MRRICLGEHVGTLINDD 239 (247)
T ss_pred HH--HHHHHHHHHCCCc-EEEEeCCCChH-HHHHHcCCCCcEEEecC
Confidence 32 3577888889997 89999999986 56777888899999753
|
|
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=190.57 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=147.1
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCc-------------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY------------------- 160 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~------------------- 160 (634)
++|+|+||+.+.+.+ +.++++.|......|.++|+|||+.+.++..|.++........+.
T Consensus 2 ~~V~KFGGssv~~~~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 81 (441)
T TIGR00657 2 LIVQKFGGTSVGNAERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEILERLIP 81 (441)
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhh
Confidence 579999999999876 888999998877789999999999888877776655433221110
Q ss_pred --------cCCC--------HHHHHHHHHHHh-HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecc
Q 006709 161 --------RITD--------SESLAAAMEAAG-GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKG 223 (634)
Q Consensus 161 --------RvT~--------~~~l~~~~~a~G-~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g 223 (634)
+.++ ....+. ..+.| .++..++.. .|+++|++ ++++++.+..+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~-ils~GE~~s~~l~~~--------~l~~~Gi~----a~~l~~~~~~l~t~~~-- 146 (441)
T TIGR00657 82 QAIAEELKRLLDAELVLEEKPREMDR-ILSFGERLSAALLSA--------ALEELGVK----AVSLLGGEAGILTDSN-- 146 (441)
T ss_pred HHHHHHHHHHHHHHHhhhcCcchHhh-eecHHHHHHHHHHHH--------HHHhCCCC----CEEEEcCcceEEecCC--
Confidence 0000 001111 12335 445544444 58899988 8999999887877553
Q ss_pred cccCccccccceEEEecHHHHHHHHcCCcEEEEcC-CccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-
Q 006709 224 VVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD- 298 (634)
Q Consensus 224 ~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~-v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld- 298 (634)
++....+..++.+.|+.+++.|.|||+++ ++.+..|++.++ ++|.+|+.+|.+|+|++|+++|||||++
T Consensus 147 ------~~~~~~~~~~~~~~l~~~l~~~~vpVv~G~~g~~~~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~ 220 (441)
T TIGR00657 147 ------FGRARVIIEILTERLEPLLEEGIIPVVAGFQGATEKGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYT 220 (441)
T ss_pred ------CCceeecHhhhHHHHHHHHhcCCEEEEeCcEeeCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCc
Confidence 22222356778899999999999999999 467788888877 7999999999999999999999999973
Q ss_pred --C----CCccccccCHHHHHHHHH
Q 006709 299 --E----SGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 299 --~----~gklI~~ls~~e~~~li~ 317 (634)
| +++++++++.+|+.+++.
T Consensus 221 ~DP~~~~~a~~i~~is~~ea~el~~ 245 (441)
T TIGR00657 221 TDPRIVPDARRIDEISYEEMLELAS 245 (441)
T ss_pred CCCCCCCCCeECCccCHHHHHHHHh
Confidence 3 689999999999988864
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis. |
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=162.70 Aligned_cols=219 Identities=19% Similarity=0.180 Sum_probs=151.6
Q ss_pred CCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
-+++|+||+|++|..++ +..++++|+.+.+.|+++.||.|||....-...+.+. | .+....|.
T Consensus 15 ~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni~Rg~~~~~~~------~---~~r~~~D~ 85 (249)
T PRK14556 15 LKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNILRGGRANFGN------K---IRRATADS 85 (249)
T ss_pred hCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHhCchhhccC------C---CchhhhhH
Confidence 37899999999997643 7899999999999999999999999876532222111 1 23344455
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
+.+++..+|..+... .|.+.|++. .-++..... +.....+.+.+.+.|+.
T Consensus 86 ~GmlaT~iNal~l~~--------~l~~~~~~~----~v~sa~~~~------------------~~~e~~~~~~~~~~l~~ 135 (249)
T PRK14556 86 MGMIATMINALALRD--------MLISEGVDA----EVFSAKGVD------------------GLLKVASAHEFNQELAK 135 (249)
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCCe----EEeeccccC------------------cCCCCCCHHHHHHHHhC
Confidence 545666777544443 477888872 222211100 01112366788889999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|.|||+.+-. | .-++++|.+|+++|..++||.|+++|||||++ |+++++++++..|.... +.
T Consensus 136 g~vvi~~gg~----G-~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~l--- 204 (249)
T PRK14556 136 GRVLIFAGGT----G-NPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---EL--- 204 (249)
T ss_pred CCEEEEECCC----C-CCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---ch---
Confidence 9999976521 1 23566899999999999999999999999983 35788888876543210 00
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
-...
T Consensus 205 ----------------------------------------------------------------------------~vmd 208 (249)
T PRK14556 205 ----------------------------------------------------------------------------NVMD 208 (249)
T ss_pred ----------------------------------------------------------------------------HhHH
Confidence 0112
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
..|+..+.+.|++ ++|+|+..++. |..++.++..||.|.-
T Consensus 209 ~~A~~~a~~~gIp-i~I~ng~~~~~-L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 209 LGAFTQCRDFGIP-IYVFDLTQPNA-LVDAVLDSKYGTWVTL 248 (249)
T ss_pred HHHHHHHHHCCCc-EEEECCCCchH-HHHHHcCCCCceEEEe
Confidence 4577778899997 89999999987 5566778889999854
|
|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=160.74 Aligned_cols=198 Identities=16% Similarity=0.130 Sum_probs=130.6
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc------c---c-----------C-
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK------Y---L-----------G- 158 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~------~---~-----------~- 158 (634)
++|.|+||+.+.+++ +..+++-|... ..+.++|+|.++-..++..|.++..... + . .
T Consensus 1 ~~V~KFGGtSv~~~~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~ 79 (298)
T cd04244 1 RLVMKFGGTSVGSAERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRHIKAAKE 79 (298)
T ss_pred CEEEEECcccCCCHHHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 479999999999865 67777766654 4578899999875445444433211000 0 0 0
Q ss_pred --------------------------Cc---cCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEE
Q 006709 159 --------------------------RY---RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVG 208 (634)
Q Consensus 159 --------------------------G~---RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~ 208 (634)
+. +-.++...+.+ .+.|+. +..++++ .|+++|++ +..
T Consensus 80 l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i-~s~GE~lSa~lla~--------~L~~~Gi~----a~~ 146 (298)
T cd04244 80 AISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYI-VSFGERLSAPIFSA--------ALRSLGIK----ARA 146 (298)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHh-ccHhHHHHHHHHHH--------HHHhCCCC----eEE
Confidence 00 00011111222 233433 4444444 58899998 889
Q ss_pred eeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcC-CccCCCCceeee---chHHHHHHHHHHcC
Q 006709 209 VSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC---NTYEVATACALAIE 284 (634)
Q Consensus 209 l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~-v~~~~~Gei~ni---d~D~lAa~LA~aL~ 284 (634)
+++.+..+++....+. . ....+....++. .+..+++.|.|||+++ ++.+.+|++.++ ++|.+|+.+|.+|+
T Consensus 147 l~~~~~~i~t~~~~~~--a--~~~~~~~~~i~~-~l~~ll~~~~vpVv~Gfig~~~~g~~ttlgRggsD~~A~~~A~~l~ 221 (298)
T cd04244 147 LDGGEAGIITDDNFGN--A--RPLPATYERVRK-RLLPMLEDGKIPVVTGFIGATEDGAITTLGRGGSDYSATIIGAALD 221 (298)
T ss_pred EcHHHcceeecCcccc--c--ccchhHHHHHHH-HHHHHhhcCCEEEEeCccccCCCCCEEEecCCChHHHHHHHHHHcC
Confidence 9888877776542210 0 000122223333 4557889999999999 477888998888 99999999999999
Q ss_pred CCEEEEeecccccC---C----CCccccccCHHHHHHHHH
Q 006709 285 ADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 285 AdkLI~LTDVdgld---~----~gklI~~ls~~e~~~li~ 317 (634)
|++|+++|||+|+. | ++++|++++.+|+.++..
T Consensus 222 a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~ 261 (298)
T cd04244 222 ADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAY 261 (298)
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHh
Confidence 99999999999973 3 689999999999998864
|
The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. |
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=162.60 Aligned_cols=194 Identities=16% Similarity=0.145 Sum_probs=131.6
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc-------c----------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------Y---------------- 156 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~-------~---------------- 156 (634)
++|.|+||+.+.+.+ ++.+++-|......+.++|+|.++-..++..|.++..... +
T Consensus 2 ~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 81 (465)
T PRK06291 2 RLVMKFGGTSVGDGERIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRERHYKAIE 81 (465)
T ss_pred cEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Confidence 468999999999866 7777777765555788899998874444433322110000 0
Q ss_pred --c------------------------CCc---cCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCccee
Q 006709 157 --L------------------------GRY---RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHE 206 (634)
Q Consensus 157 --~------------------------~G~---RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~a 206 (634)
. .+. +-.++...+.+ .+.|+. +..++.. .|+++|++ +
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i-~s~GE~~Sa~l~~~--------~L~~~Gi~----a 148 (465)
T PRK06291 82 EAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYI-LSFGERLSAPILSG--------ALRDLGIK----S 148 (465)
T ss_pred HhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHH-HhhhHHHHHHHHHH--------HHHhCCCC----e
Confidence 0 000 00112233333 333433 4555554 48899998 8
Q ss_pred EEeeccCCceeeeeecccccCccccccceEEEec----HHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHH
Q 006709 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD----VTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATA 278 (634)
Q Consensus 207 v~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd----~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~ 278 (634)
..+++.+..+++.... +..+.. ..+ .+.++.+++.|.|||+.+. +.+.+|++.++ ++|.+|+.
T Consensus 149 ~~l~~~~~~i~t~~~~--------~~~~~~-~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~~~g~~~tlgrggsD~~A~~ 219 (465)
T PRK06291 149 VALTGGEAGIITDSNF--------GNARPL-PKTYERVKERLEPLLKEGVIPVVTGFIGETEEGIITTLGRGGSDYSAAI 219 (465)
T ss_pred EEEchHHCcEEecCCC--------Cceeec-hhhHHHHHHHHHHHhhcCcEEEEeCcEEcCCCCCEEEecCCChHHHHHH
Confidence 8898888777775432 211110 011 2468888999999999994 77888998888 99999999
Q ss_pred HHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHH
Q 006709 279 CALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 279 LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li 316 (634)
+|.+|+||.|+++|||||++ |++++|++++.+|+.++.
T Consensus 220 ~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~ 264 (465)
T PRK06291 220 IGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELS 264 (465)
T ss_pred HHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHH
Confidence 99999999999999999973 368999999999888774
|
|
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-14 Score=134.23 Aligned_cols=131 Identities=32% Similarity=0.585 Sum_probs=112.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgq 528 (634)
..+|+++++|++.+.+++..+.......+.+.+++...+..++++..+++++|++.+.+. ....++|..++|+|+|||+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~~-~~~~~~i~~v~V~p~~rg~ 80 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHIL-WEDLAEIRSLAVSEDYRGQ 80 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEec-cCCceEEEEEEECHHHcCC
Confidence 368999999999999998876666555566778888888888999999999999999853 4456789999999999999
Q ss_pred CHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhh
Q 006709 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKR 606 (634)
Q Consensus 529 GiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~ 606 (634)
|+|++|+ ..+++.+++.|+..+.+.+ .+.+||+|+||+..+...+|+..|..
T Consensus 81 Glg~~Ll-------------------------~~l~~~a~~~g~~~i~~~~-~~~~~Y~k~GF~~~~~~~~~~~~~~~ 132 (152)
T PRK07757 81 GIGRMLV-------------------------EACLEEARELGVKRVFALT-YQPEFFEKLGFREVDKEALPQKVWAD 132 (152)
T ss_pred CHHHHHH-------------------------HHHHHHHHhCCCCeEEEEe-CcHHHHHHCCCEEcccccCChhHHhc
Confidence 9999999 9999999999999987765 46789999999999998899887764
|
|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-13 Score=147.34 Aligned_cols=195 Identities=15% Similarity=0.131 Sum_probs=130.6
Q ss_pred cCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc-------------c--------
Q 006709 98 RGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK-------------Y-------- 156 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~-------------~-------- 156 (634)
..+++|.|+||+.+.+ .++.+++-|... ..|.++|+|.++...++..|.++..... .
T Consensus 2 ~~~m~V~KFGGsSv~~-~~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~~~L~~~~ 79 (341)
T PRK08373 2 VEKMIVVKFGGSSVRY-DFEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFAKRLGIDL 79 (341)
T ss_pred CCCCEEEEECCcchHh-HHHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccch
Confidence 4688999999999987 466666666643 3578999999986555554433211000 0
Q ss_pred ----------cCCc-cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccc
Q 006709 157 ----------LGRY-RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV 225 (634)
Q Consensus 157 ----------~~G~-RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~ 225 (634)
.... ...++..++.+.....+++..+++. .|+++|++ +..+++.+- +.+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~--------~L~~~Gi~----a~~l~~~~~-i~t~~----- 141 (341)
T PRK08373 80 EILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAE--------ALENEGIK----GKVVDPWEI-LEAKG----- 141 (341)
T ss_pred hhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH--------HHHHCCCc----eEEEeHHHh-eeecC-----
Confidence 0000 1122344555544444455666665 58999998 666655432 22211
Q ss_pred cCccccccceE----EEecHHHHHHHHcCCcEEEEcCCccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC
Q 006709 226 DGVDYGATGEV----KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD 298 (634)
Q Consensus 226 ~g~d~g~~G~v----~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld 298 (634)
+++ ..++ ...+.+.+..+++.|.|||+++...+.+|++.++ ++|.+|+.+|.+|+|++++|+|||||+.
T Consensus 142 ---~~~-~a~i~~~~s~~~~~~l~~~l~~g~VpVv~Gf~g~~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVy 217 (341)
T PRK08373 142 ---SFG-NAFIDIKKSKRNVKILYELLERGRVPVVPGFIGNLNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIY 217 (341)
T ss_pred ---Ccc-ceeechhhhhhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccC
Confidence 111 1111 2356689999999999999998755667876654 8999999999999999999999999973
Q ss_pred -------CCCccccccCHHHHHHHH
Q 006709 299 -------ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 299 -------~~gklI~~ls~~e~~~li 316 (634)
+++++|++++.+|+.++.
T Consensus 218 taDP~~v~~A~~i~~isy~Ea~ela 242 (341)
T PRK08373 218 TADPKLVPSARLIPYLSYDEALIAA 242 (341)
T ss_pred CCCCCCCCCCeEcccCCHHHHHHHH
Confidence 358899999999988764
|
|
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-14 Score=135.04 Aligned_cols=125 Identities=21% Similarity=0.303 Sum_probs=96.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecC----CCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----EKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~----~~~~ei~~l~ 520 (634)
..||+++.+|++.+.+++.......+......+.+.+.+ ..++|++.++++||++.+..... ...++|..++
T Consensus 4 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l~ 83 (144)
T PRK10146 4 CELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELV 83 (144)
T ss_pred cEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheeheeE
Confidence 468999999999999998755433222111123343333 26788899999999999864321 1246788999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|||||+|++|+ +++++.|++.|++.+.+.+ ..|.+||+++||+..+.
T Consensus 84 v~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 84 VMPQARGLNVGSKLL-------------------------AWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 999999999999999 9999999999999999988 47999999999998765
Q ss_pred cc
Q 006709 597 EM 598 (634)
Q Consensus 597 ~~ 598 (634)
.+
T Consensus 139 ~~ 140 (144)
T PRK10146 139 RF 140 (144)
T ss_pred hh
Confidence 43
|
|
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.2e-13 Score=135.51 Aligned_cols=218 Identities=20% Similarity=0.172 Sum_probs=152.3
Q ss_pred cCCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 006709 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
+.+++|+||||++|..++ +++++++|+.+.+.|.+|.||.|||........... | .+....|
T Consensus 4 ~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~-------g---~~r~~~D 73 (238)
T COG0528 4 KYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAAA-------G---MDRVTAD 73 (238)
T ss_pred ceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHHc-------C---Cchhhhh
Confidence 457999999999998732 789999999999999999999999977654433221 2 2344445
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHc
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd 249 (634)
.....+..+|..+... .|.++|++.++ .+......+ ....+.....+.|+
T Consensus 74 ~mGmlaTvmNal~L~~--------aL~~~~~~~~v----~sai~~~~~------------------~e~~~~~~A~~~l~ 123 (238)
T COG0528 74 YMGMLATVMNALALQD--------ALERLGVDTRV----QSAIAMPQV------------------AEPYSRREAIRHLE 123 (238)
T ss_pred HHHHHHHHHHHHHHHH--------HHHhcCCccee----cccccCccc------------------cCccCHHHHHHHHH
Confidence 5545566677554443 47788887322 111111111 11234566677899
Q ss_pred CCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeec-cccc-------CCCCccccccCHHHHHHHHHhhch
Q 006709 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPIL-------DESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTD-Vdgl-------d~~gklI~~ls~~e~~~li~~~~~ 321 (634)
.|.|||.+.- . |.. .-.+|.+|++.|.+++||.|+..|+ |||+ ||+++.+++|+..|+.+..-+-
T Consensus 124 ~grVvIf~gG-t---g~P-~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~v-- 196 (238)
T COG0528 124 KGRVVIFGGG-T---GNP-GFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLKV-- 196 (238)
T ss_pred cCCEEEEeCC-C---CCC-CCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcCee--
Confidence 9999998751 1 121 2356999999999999999999995 9997 3679999999998876542100
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
|-
T Consensus 197 ------------------------------------------------------------------------------mD 198 (238)
T COG0528 197 ------------------------------------------------------------------------------MD 198 (238)
T ss_pred ------------------------------------------------------------------------------ec
Confidence 11
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
..|...+-+.+++ ++++|...+++ |..++.++..||.+.
T Consensus 199 --~tA~~l~~~~~i~-i~Vfn~~~~~~-l~~~~~ge~~gT~V~ 237 (238)
T COG0528 199 --PTAFSLARDNGIP-IIVFNINKPGN-LKRALKGEEVGTIVE 237 (238)
T ss_pred --HHHHHHHHHcCCc-EEEEeCCCCcc-HHHHHcCCCCceEec
Confidence 3455666678886 89999999998 667677889999875
|
|
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.2e-13 Score=147.51 Aligned_cols=200 Identities=15% Similarity=0.141 Sum_probs=142.8
Q ss_pred CeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHH-HHHHHHcC----------------------Cccc
Q 006709 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQI-DKLLSERG----------------------HEAK 155 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I-~~~l~~lg----------------------~~~~ 155 (634)
+++|.|+||+.+.+.+ +...++-++...+.|.+||+|.+++.-+ +.+++-.. ..+.
T Consensus 2 ~~iV~KFGGTSva~~e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~el~~~~~ 81 (447)
T COG0527 2 RLIVQKFGGTSVADAERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASELILDPF 81 (447)
T ss_pred ceEEEEeCCcccCCHHHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHHHhhcch
Confidence 4799999999999866 8888888888778899999999987633 33322221 1110
Q ss_pred cc-----------------CCccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceee
Q 006709 156 YL-----------------GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLA 218 (634)
Q Consensus 156 ~~-----------------~G~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ 218 (634)
.. .-....++..+|.+...-.+++..|+++ .|++.|++ +..+++.+-.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~--------~L~~~Gv~----A~~~~~~~~~i~t 149 (447)
T COG0527 82 IAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAA--------ALNALGVD----ARSLDGRQAGIAT 149 (447)
T ss_pred hhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHH--------HHHhCCCc----eEEEchHHceeee
Confidence 00 0001124555666544444455666666 48999998 6666666554544
Q ss_pred eeecccccCccccccceEEEecHHH-HHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeec
Q 006709 219 AKRKGVVDGVDYGATGEVKKVDVTR-MRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIID 293 (634)
Q Consensus 219 ak~~g~~~g~d~g~~G~v~~vd~~~-I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTD 293 (634)
.. .++ ..++...+.+. +..+++.|.|||+.+. +.+.+|++..+ -+|..|+.||..|+||++.+.||
T Consensus 150 ~~--------~~~-~a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TD 220 (447)
T COG0527 150 DS--------NHG-NARILDEDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLGRGGSDYSAAALAAALGADEVEIWTD 220 (447)
T ss_pred cC--------ccc-ccccchhhhhhhHHHHhcCCcEEEecCceeecCCCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEEC
Confidence 32 111 23344455566 8999999999999985 77788887755 68999999999999999999999
Q ss_pred cccc---C----CCCccccccCHHHHHHHHHhhc
Q 006709 294 GPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 294 Vdgl---d----~~gklI~~ls~~e~~~li~~~~ 320 (634)
|||+ | |++++|++|+.+|+.++..-|+
T Consensus 221 VdGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GA 254 (447)
T COG0527 221 VDGVYTADPRIVPDARLLPEISYEEALELAYLGA 254 (447)
T ss_pred CCCCccCCCCCCCcceEcCccCHHHHHHHHHCCc
Confidence 9998 4 5799999999999999875544
|
|
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=128.16 Aligned_cols=125 Identities=25% Similarity=0.365 Sum_probs=93.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec-----CCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF-----KEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l------~~~~V~~~~g~iiG~~~l~~~~-----~~~~~ei~ 517 (634)
..||+++++|++.+.+++..+...........+.+.+.. ..+++++.+|++||++.+.... ....++|.
T Consensus 7 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~ 86 (147)
T PTZ00330 7 LELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHIE 86 (147)
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEEE
Confidence 469999999999999998765433222111122222221 1345556789999999886321 11247899
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
.++|+|+|||+|+|++|+ .++++++++.++..+.+.+ ..+.+||+++||+.+..
T Consensus 87 ~~~V~~~~rg~Gig~~l~-------------------------~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 87 DVVVDPSYRGQGLGRALI-------------------------SDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACER 141 (147)
T ss_pred EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEEece
Confidence 999999999999999999 9999999999999988877 57899999999999876
Q ss_pred cc
Q 006709 597 EM 598 (634)
Q Consensus 597 ~~ 598 (634)
.|
T Consensus 142 ~~ 143 (147)
T PTZ00330 142 QM 143 (147)
T ss_pred EE
Confidence 54
|
|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.9e-13 Score=131.12 Aligned_cols=126 Identities=28% Similarity=0.552 Sum_probs=102.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEECCCCcC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rg 527 (634)
..+|+++++|.+.+.+++..+.............+.+....+++++ .++++||++.+.+. ....++|..++|+|+|||
T Consensus 6 i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~-~~~~~~i~~l~V~p~~rg 84 (169)
T PRK07922 6 ITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVM-WEDLAEIRTVAVDPAARG 84 (169)
T ss_pred ceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeec-CCCceEEEEEEECHHHhC
Confidence 4799999999999999988766544433334444445556788888 89999999988754 345688999999999999
Q ss_pred CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchh
Q 006709 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 601 (634)
Q Consensus 528 qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~ 601 (634)
+|+|++|| +++++.+++.|++.+++.+. +.+||+|+||+..+....+.
T Consensus 85 kGiG~~Ll-------------------------~~~~~~a~~~g~~~l~~~~~-~~~fY~k~GF~~~~~~~~~~ 132 (169)
T PRK07922 85 RGVGHAIV-------------------------ERLLDVARELGLSRVFVLTF-EVEFFARHGFVEIDGTPVTP 132 (169)
T ss_pred CCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEec-cHHHHHHCCCEECccccCCh
Confidence 99999999 99999999999999988763 57899999999987655443
|
|
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=157.67 Aligned_cols=136 Identities=29% Similarity=0.556 Sum_probs=115.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgq 528 (634)
..||+++++|++.+.+++..+.......+++.+++......++|++.+|++|||+.+.+. ....++|..++|+|+||||
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~~g~IVG~~~l~~~-~~~~~~I~~i~V~P~~rGk 542 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYIY-DSGLAEIRSLGVEAGWQVQ 542 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEECCEEEEEEEEEEc-CCCeEEEEEEEECHHHcCC
Confidence 469999999999999998776555444556777777777889999999999999998753 3456899999999999999
Q ss_pred CHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhcc
Q 006709 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 608 (634)
Q Consensus 529 GiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~ 608 (634)
|||++|| +++++++++.|++.+++.+ .+..||+|+||+.++..++|+.....-.
T Consensus 543 GIGk~Ll-------------------------~~l~~~ak~~g~~~i~l~~-~a~~FYek~GF~~~~~~~~~~~~~~~~~ 596 (614)
T PRK12308 543 GQGSALV-------------------------QYLVEKARQMAIKKVFVLT-RVPEFFMKQGFSPTSKSLLPEKVLKDCD 596 (614)
T ss_pred CHHHHHH-------------------------HHHHHHHHHCCCCEEEEee-CcHHHHHHCCCEECCcccCChHHHHhhc
Confidence 9999999 9999999999999998876 4679999999999999999987766555
Q ss_pred CCC
Q 006709 609 LSR 611 (634)
Q Consensus 609 ~~~ 611 (634)
+.+
T Consensus 597 ~~~ 599 (614)
T PRK12308 597 QCP 599 (614)
T ss_pred cCC
Confidence 443
|
|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.7e-12 Score=134.14 Aligned_cols=200 Identities=19% Similarity=0.187 Sum_probs=120.6
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCc------cc------------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE------AK------------------ 155 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~------~~------------------ 155 (634)
++|.|+||+.+.+.+ ++++++-|..-.+.+.++|+|.++-..++..|.++-.. ..
T Consensus 1 ~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~~~~L~~ 80 (295)
T cd04259 1 WVVLKFGGTSVSSRARWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNLAEQLEV 80 (295)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHHHHHhhh
Confidence 368999999998866 67777766543345677888877643333322111000 00
Q ss_pred ---------------ccCCc---cCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCce
Q 006709 156 ---------------YLGRY---RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNF 216 (634)
Q Consensus 156 ---------------~~~G~---RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~ 216 (634)
...+. ...++...+.+. +.|+. ...|++. .|++.|++ +..+.+.+ +
T Consensus 81 ~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~-s~GE~lSa~lla~--------~L~~~Gi~----a~~ld~~~--~ 145 (295)
T cd04259 81 DADALLANDLAQLQRWLTGISLLKQASPRTRAEVL-ALGELMSTRLGAA--------YLEAQGLK----VKWLDARE--L 145 (295)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHH-HHHHHHHHHHHHH--------HHHhCCCC----eEEEcHHH--h
Confidence 00000 011233333333 34443 4555555 48899998 55554433 2
Q ss_pred eeeee-cccccCccccccceE-EEecHHHHHHHHcC-CcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEE
Q 006709 217 LAAKR-KGVVDGVDYGATGEV-KKVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLI 289 (634)
Q Consensus 217 l~ak~-~g~~~g~d~g~~G~v-~~vd~~~I~~LLd~-G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI 289 (634)
+.... .+.- ..+|+ ...+ .......|.+.++. +.|||+.+. +.+..|++..+ ++|.+|+.+|.+|+||.|+
T Consensus 146 i~~~~~~~~~-~~~~~-~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~~G~~ttLGrggsD~tA~~lA~~l~A~~l~ 223 (295)
T cd04259 146 LTATPTLGGE-TMNYL-SARCESEYADALLQKRLADGAQLIITQGFIARNAHGETVLLGRGGSDTSAAYFAAKLQAARCE 223 (295)
T ss_pred eeeccccccc-ccccc-cceehhhhhHHHHHHHHhcCCceeEeCCceeeCCCCCEEEECCCChHHHHHHHHHHcCCCEEE
Confidence 22111 0000 00111 1111 11234567766665 679999986 77788887654 8999999999999999999
Q ss_pred Eeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 290 CIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 290 ~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
++|||+|+ | +++++|++++.+|+.++..
T Consensus 224 i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~ 258 (295)
T cd04259 224 IWTDVPGLFTANPHEVPHARLLKRLDYDEAQEIAT 258 (295)
T ss_pred EEECCCccccCCCCCCCCCeEeceeCHHHHHHHHH
Confidence 99999997 3 3689999999999988864
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine. |
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=135.25 Aligned_cols=122 Identities=20% Similarity=0.228 Sum_probs=97.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccC-CHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
..||+++++|++.+.+|+....... ..+. ..+.+.+.+ ..+++++.+|++||++.+........++|..++|+|+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~~-~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P~ 194 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPTY-PFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLPE 194 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhccC-CCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECHH
Confidence 4699999999999999987754322 2122 233344443 2577888999999999875444456789999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|| +.+++++++.|+..+++.+ .++..+|+++||+.++.
T Consensus 195 yRG~GiG~~Ll-------------------------~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~ 245 (266)
T TIGR03827 195 YRGKGLAKILL-------------------------AAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGT 245 (266)
T ss_pred HcCCCHHHHHH-------------------------HHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccE
Confidence 99999999999 9999999999999998877 35788999999999886
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.7e-12 Score=131.73 Aligned_cols=192 Identities=15% Similarity=0.129 Sum_probs=120.9
Q ss_pred EEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccccc-------------------CCc-
Q 006709 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL-------------------GRY- 160 (634)
Q Consensus 102 iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~-------------------~G~- 160 (634)
.|.|+||+.+.+.+ +..+++-|.... .+.++|+|.++-..++..|.++....... +.+
T Consensus 2 ~V~KFGGtSv~~~~~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~~l~ 80 (294)
T cd04257 2 KVLKFGGTSLANAERIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLDLITELL 80 (294)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhh
Confidence 59999999998865 777777666443 46788888887555554443321100000 000
Q ss_pred -----------------------------cCCCHHHHHHHHHHHhH-HHHHHHHhcCCCCchhhHHhcCCCCcceeEEee
Q 006709 161 -----------------------------RITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVS 210 (634)
Q Consensus 161 -----------------------------RvT~~~~l~~~~~a~G~-in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~ 210 (634)
+-.++...+.+ .+.|+ +...|++. .|++.|++ +..++
T Consensus 81 ~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i-ls~GE~lSa~lla~--------~L~~~Gi~----a~~ld 147 (294)
T cd04257 81 SGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKV-LSFGERLSARLLSA--------LLNQQGLD----AAWID 147 (294)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhh-eeHHHHHHHHHHHH--------HHHhCCCC----eEEEc
Confidence 00011112222 22333 33445554 48889988 66666
Q ss_pred ccCCceeeeeecccccCccccccceEEE-ecHHHHHHHHcC-CcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcC
Q 006709 211 VASGNFLAAKRKGVVDGVDYGATGEVKK-VDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIE 284 (634)
Q Consensus 211 ~~dg~~l~ak~~g~~~g~d~g~~G~v~~-vd~~~I~~LLd~-G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~ 284 (634)
+.+. +.+.. +++. ..+.. ...+.++.+++. +.|||+.+. +.+..|++..+ .+|.+|+.+|..|+
T Consensus 148 ~~~~-i~t~~--------~~~~-a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRGGSD~~A~~lA~~l~ 217 (294)
T cd04257 148 AREL-IVTDG--------GYLN-AVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQGETTTLGRNGSDYSAAILAALLD 217 (294)
T ss_pred hHHe-eEecC--------CCCc-eEechHhhHHHHHHHHhcCCCEEEecCcccCCCCCCEEECCCCchHHHHHHHHHHhC
Confidence 6552 33211 1221 12211 224677777776 899999986 66677887654 58999999999999
Q ss_pred CCEEEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 285 ADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 285 AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
||.++++|||||+ | +++++|+.|+.+|+.++..
T Consensus 218 a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~ 257 (294)
T cd04257 218 ADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSY 257 (294)
T ss_pred CCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHh
Confidence 9999999999997 3 4689999999999888754
|
These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act |
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.5e-13 Score=119.59 Aligned_cols=119 Identities=21% Similarity=0.367 Sum_probs=87.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeec----C--CCeEEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF----K--EKCGEVAAIGV 521 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~----~--~~~~ei~~l~V 521 (634)
+||+++++|++++.+|+...........+........+ ..+++++++++|||++.+.|.. + -..+.+..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 48999999999999998655543332210111222222 5789999999999999998752 1 13588999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeec
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 594 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~ 594 (634)
+|+|||||+|++|+ +.+.+.+++.|+..+++.. ...+||+++||+.+
T Consensus 81 ~p~~R~~Gl~~~L~-------------------------~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 81 DPEYRGRGLGRQLM-------------------------RALLERARERGVPFIFLFP-SSPPFYRRFGFEYA 127 (127)
T ss_dssp -GGGTTSSHHHHHH-------------------------HHHHHHHHHTT-SEEEEE--SSHHHHHHTTEEEE
T ss_pred CHHHcCCCHHHHHH-------------------------HHHHHHHHhCCCCEEEEec-CChhhhhcCCCEEC
Confidence 99999999999999 9999999999999888776 45889999999863
|
... |
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=131.85 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=65.9
Q ss_pred EecHHHHHHHHcCCcEEEEcCCccCCCCceeee---chHHHHHHHHHHcCCCEEEEeecccccC-------CCCcccccc
Q 006709 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 307 (634)
Q Consensus 238 ~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~l 307 (634)
..+.+.+..+++.|.|||+++...+.+|...++ ++|.+|+.+|.+|+||.++++|||||+. +++++|+++
T Consensus 144 ~~~~~~l~~~l~~g~IpVv~Gf~~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 144 KRNAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 446788899999999999998655667776654 7999999999999999999999999972 357899999
Q ss_pred CHHHHHHH
Q 006709 308 TLQEADSL 315 (634)
Q Consensus 308 s~~e~~~l 315 (634)
+.+|+.++
T Consensus 224 sy~Ea~el 231 (327)
T TIGR02078 224 SYEEIKIA 231 (327)
T ss_pred CHHHHHHH
Confidence 99887654
|
This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between. |
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=130.65 Aligned_cols=78 Identities=21% Similarity=0.215 Sum_probs=66.7
Q ss_pred HHHHHHHHcC-CcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccC
Q 006709 241 VTRMRERLDG-GCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLT 308 (634)
Q Consensus 241 ~~~I~~LLd~-G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls 308 (634)
.+.++.+++. +.|||+.+. +.+..|++..+ ++|.+|+.+|..|+||+++++|||||+ | +++++|++++
T Consensus 168 ~~~~~~~~~~~~~v~Vv~Gfig~~~~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls 247 (293)
T cd04243 168 KERLAQLLAEHGKVVVTQGFIASNEDGETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELS 247 (293)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCCCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeC
Confidence 3578888887 899999985 66778888765 589999999999999999999999997 3 4689999999
Q ss_pred HHHHHHHHHh
Q 006709 309 LQEADSLIRQ 318 (634)
Q Consensus 309 ~~e~~~li~~ 318 (634)
.+|+.++...
T Consensus 248 ~~ea~~l~~~ 257 (293)
T cd04243 248 YDEAMELAYF 257 (293)
T ss_pred HHHHHHHHhC
Confidence 9999888654
|
These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK- |
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.5e-12 Score=120.99 Aligned_cols=120 Identities=23% Similarity=0.284 Sum_probs=90.8
Q ss_pred ccCccchHHHHHHhHHHHHHccc---C-ccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecC-----CCeEEEE
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFK-----EKCGEVA 517 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~---~-~~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~-----~~~~ei~ 517 (634)
--|+.+|++.|.+|+........ . .+.+.....+.+ ..++|++++|++|||+.+...+. ...+.|.
T Consensus 10 ~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie 89 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTE 89 (154)
T ss_pred hhccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEE
Confidence 34789999999999765211111 0 111111111222 37889999999999998864332 2457899
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH---HhHHHHHhCCCeec
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFREC 594 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~---~a~~~Y~k~GF~~~ 594 (634)
.++|+|++||||||++|+ ++++++|++.|+..+++..| ++.+||.++|+++.
T Consensus 90 ~l~V~~~~RGqGIG~~Ll-------------------------~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~~~~ 144 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALL-------------------------RATEALARDLGATGLYVSGPTEGRLVQLLPAAGYRET 144 (154)
T ss_pred EEEEChhccCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEecCCCccchHHHHhCCchhh
Confidence 999999999999999999 99999999999999999985 48999999999987
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
..
T Consensus 145 ~~ 146 (154)
T PHA00673 145 NR 146 (154)
T ss_pred ch
Confidence 54
|
|
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.4e-12 Score=115.43 Aligned_cols=119 Identities=18% Similarity=0.263 Sum_probs=91.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCC--HHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~--~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
..+|+++++|++.+.+++... ....++. ...+...+ ..++++..++++||++.+.. ......+..++|+
T Consensus 3 ~~ir~~~~~d~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~--~~~~~~i~~i~v~ 77 (140)
T PRK03624 3 MEIRVFRQADFEAVIALWERC---DLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGY--DGHRGWAYYLAVH 77 (140)
T ss_pred eEEEEcccccHHHHHHHHHhc---CCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeec--cCCCceEEEEEEC
Confidence 358999999999999997654 2222221 11222222 25788888999999998763 2244677789999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
|+|||||+|++|| .++++.+++.+++.+.+.+ ..+.+||+++||+..+..
T Consensus 78 p~~rg~Gig~~ll-------------------------~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~ 131 (140)
T PRK03624 78 PDFRGRGIGRALV-------------------------ARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDRI 131 (140)
T ss_pred HHHhCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccEE
Confidence 9999999999999 8889999999999998877 468999999999986653
|
|
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.9e-12 Score=118.31 Aligned_cols=114 Identities=17% Similarity=0.192 Sum_probs=85.2
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHH-----------Hhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL-----------LKAL--DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~-----------~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei 516 (634)
.||+++++|++.+.+++...+........+.+++ .+.+ ..++|++.+|+++|++.+.. .++
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~~------~~i 75 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIE------HYI 75 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEehh------cee
Confidence 5899999999999999887665433322233222 2222 36888999999999988862 357
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
..++|+|+|||||+|++|| +++++.+.++ .+.. ...+.+||+++||+.++.
T Consensus 76 ~~~~v~p~~~g~GiG~~Ll-------------------------~~~~~~~~~l---~v~~-~~~a~~~Y~k~Gf~~~g~ 126 (147)
T PRK09831 76 DMLFVDPEYTRRGVASALL-------------------------KPLIKSESEL---TVDA-SITAKPFFERYGFQTVKQ 126 (147)
T ss_pred eeEEECHHHcCCCHHHHHH-------------------------HHHHHHhhhe---Eeec-chhhHHHHHHCCCEEeec
Confidence 7899999999999999999 7777777552 2222 257899999999999887
Q ss_pred cc
Q 006709 597 EM 598 (634)
Q Consensus 597 ~~ 598 (634)
..
T Consensus 127 ~~ 128 (147)
T PRK09831 127 QR 128 (147)
T ss_pred cc
Confidence 54
|
|
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=110.63 Aligned_cols=103 Identities=31% Similarity=0.495 Sum_probs=81.0
Q ss_pred hHHHHHHhHHHHHHcccCc---------cCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 458 DLSGIKQIIQPLVESGALV---------RRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 458 D~~~i~~l~~~~~~~~~~~---------~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
|+++|.+|+...+...... ..+.+.+.+.+ ..++|++.++++||++.+. +..+|..++|+|+
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~-----~~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE-----PDGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE-----TCEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc-----CCCeEEEEEEChh
Confidence 7889999988766553321 13455555554 2689999999999999986 3445999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCC
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 591 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF 591 (634)
|||+|+|++|+ +++++.+++ |++.+.+.. ..+..||+++||
T Consensus 76 ~r~~Gig~~Ll-------------------------~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 76 YRGRGIGRALL-------------------------DAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp GTTSSHHHHHH-------------------------HHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred hcCCcHHHHHH-------------------------HHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 99999999999 999999877 999888887 579999999998
|
|
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
Probab=99.35 E-value=8.5e-11 Score=123.41 Aligned_cols=192 Identities=15% Similarity=0.132 Sum_probs=125.2
Q ss_pred EEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchH-------HHHHHHHHc-CCcc------ccc---------
Q 006709 102 FVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHV-------QIDKLLSER-GHEA------KYL--------- 157 (634)
Q Consensus 102 iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~-------~I~~~l~~l-g~~~------~~~--------- 157 (634)
.|.|+||+.+.+.+ ++.+++-|. ..+.++|+|.++-. -+...|.++ .... ...
T Consensus 2 ~V~KFGGtSv~~~~~i~~v~~ii~---~~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 78 (288)
T cd04245 2 KVVKFGGSSLASAEQFQKVKAIVK---ADPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEAIVDRYAE 78 (288)
T ss_pred EEEEECcCccCCHHHHHHHHHHHH---hcCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 58999999998865 666666554 23567888888743 244333211 0000 000
Q ss_pred -----------------------CCccCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccC
Q 006709 158 -----------------------GRYRITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVAS 213 (634)
Q Consensus 158 -----------------------~G~RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~d 213 (634)
......++...+.+ .+.|+. +..+++. .|++.|++ +..+++.+
T Consensus 79 ~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i-~s~GE~lSa~ll~~--------~L~~~Gi~----a~~ld~~~ 145 (288)
T cd04245 79 IADELGLPMSILEEIAEILENLANLDYANPDYLLDAL-KARGEYLNAQLMAA--------YLNYQGID----ARYVIPKD 145 (288)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHH-HHHhHHHHHHHHHH--------HHHHCCCC----eEEEcHHH
Confidence 00000122233333 334443 4555555 48889988 55665554
Q ss_pred CceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEE
Q 006709 214 GNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLI 289 (634)
Q Consensus 214 g~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI 289 (634)
-.+++.. .++. ..+.....+.+.++++.+.|||+.+. +.+.+|++..+ .+|..|+.+|.+|+||.+.
T Consensus 146 ~~i~t~~--------~~~~-a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~G~~ttLgRggSD~tAal~A~~l~A~~v~ 216 (288)
T cd04245 146 AGLVVTD--------EPGN-AQILPESYQKIKKLRDSDEKLVIPGFYGYSKNGDIKTFSRGGSDITGAILARGFQADLYE 216 (288)
T ss_pred CceeecC--------Cccc-cccchhhHHHHHHHHhCCCEEEEeCccccCCCCCEEEcCCCchHHHHHHHHHHcCCCEEE
Confidence 4344322 1211 12223356788888899999999985 77788999888 8999999999999999999
Q ss_pred Eeeccccc---C----CCCccccccCHHHHHHHHHh
Q 006709 290 CIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 290 ~LTDVdgl---d----~~gklI~~ls~~e~~~li~~ 318 (634)
+.|||||+ | ++++.|++|+.+|+.++...
T Consensus 217 i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~ela~~ 252 (288)
T cd04245 217 NFTDVDGIYAANPRIVANPKPISEMTYREMRELSYA 252 (288)
T ss_pred EEeCCCceECCCCCCCCCCeEeCccCHHHHHHHHHC
Confidence 99999997 3 57899999999999988643
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine. |
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=116.50 Aligned_cols=123 Identities=22% Similarity=0.305 Sum_probs=100.1
Q ss_pred cccccCccchHHHHHHhHHHHHHccc---CccCCHHHHHhh--c----CcEEEEEE---CCeEEEEEEEeeecC----CC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA--L----DSFYVVER---EGQIIACAALFPFFK----EK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~---~~~~~~~~~~~~--l----~~~~V~~~---~g~iiG~~~l~~~~~----~~ 512 (634)
..||.++++|.+.+.+++.++.+-.- .+..+.+.+... + .+++|+.. ++.++|++.+++... ..
T Consensus 4 ~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~ 83 (163)
T KOG3216|consen 4 IRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQ 83 (163)
T ss_pred eEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccccc
Confidence 46999999999999999987765332 234466666664 2 25666665 789999999876543 24
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
..+|..|+|.|+|||+|+|++|+ +.+-+.|..+|+.++.+.+ .+|+.||++
T Consensus 84 ~iYleDlyV~e~yR~kG~Gs~Ll-------------------------~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k 138 (163)
T KOG3216|consen 84 GIYLEDLYVREQYRGKGIGSKLL-------------------------KFVAEEADKLGTPRVEWVVLDWNHRAILLYEK 138 (163)
T ss_pred eEEEEeeEecchhcccChHHHHH-------------------------HHHHHHHHHcCCCcEEEEEeccchhHHHHHHH
Confidence 57999999999999999999999 9999999999999999988 589999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
.|++....
T Consensus 139 ~gaq~l~~ 146 (163)
T KOG3216|consen 139 VGAQDLKE 146 (163)
T ss_pred hCccccce
Confidence 99987543
|
|
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=103.74 Aligned_cols=75 Identities=32% Similarity=0.524 Sum_probs=68.9
Q ss_pred EEECCeEEEEEEEeeecCC----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 493 VEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 493 ~~~~g~iiG~~~l~~~~~~----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
++.+|+|||++.+.+.... ...+|..++|+|+|||+|+|++|+ +++++.++
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~-------------------------~~~~~~~~ 55 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLL-------------------------QAAEEWAR 55 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHH
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhh-------------------------hhhhhhHH
Confidence 5789999999999877654 689999999999999999999999 99999999
Q ss_pred HcCCcEEEEec----HHhHHHHHhCCCe
Q 006709 569 SLGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 569 ~~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
+.|++.+.+.+ +.+.+||+++||+
T Consensus 56 ~~g~~~i~~~~~~~n~~~~~~~~k~Gf~ 83 (83)
T PF00583_consen 56 KRGIKRIYLDVSPDNPAARRFYEKLGFE 83 (83)
T ss_dssp HTTESEEEEEEETTGHHHHHHHHHTTEE
T ss_pred hcCccEEEEEEeCCCHHHHHHHHHcCCC
Confidence 99999999988 4689999999996
|
3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A .... |
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.2e-12 Score=117.38 Aligned_cols=122 Identities=25% Similarity=0.397 Sum_probs=90.3
Q ss_pred cccccCccchHH-HHHHhHHHHHHcccCccCCHHHHHhhc----C-----cEEEEEE--CCeEEEEEEEeeec-----CC
Q 006709 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL----D-----SFYVVER--EGQIIACAALFPFF-----KE 511 (634)
Q Consensus 449 e~iR~a~~~D~~-~i~~l~~~~~~~~~~~~~~~~~~~~~l----~-----~~~V~~~--~g~iiG~~~l~~~~-----~~ 511 (634)
..||+++++|++ .+..++..+... .+++.+.+.+.+ . .+++++. ++++||++.+.+.. ..
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 7 FKVRRLEISDKSKGFLELLQQLTVV---GDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred eEEeEhhhcccchHHHHHHHhccCC---CCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 359999999998 488776543221 234544444433 1 2455665 68999999885221 12
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
..++|..++|+|+|||||+|++|+ +.++++|+++|+..|.+.+ .....||+++|
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~G 138 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKII-------------------------EALTEHARSAGCYKVILDCSEENKAFYEKCG 138 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEeccccHHHHHHCc
Confidence 346777899999999999999999 9999999999999999988 33457999999
Q ss_pred Ceeccccc
Q 006709 591 FRECSIEM 598 (634)
Q Consensus 591 F~~~~~~~ 598 (634)
|+..+..|
T Consensus 139 F~~~g~~~ 146 (150)
T PLN02706 139 YVRKEIQM 146 (150)
T ss_pred CEEehhhe
Confidence 99987655
|
|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.2e-11 Score=119.78 Aligned_cols=122 Identities=18% Similarity=0.230 Sum_probs=91.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcc-cCccC-CHH---H-HH----hhc----Cc--EEEEEECCeEEEEEEEeeecCCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRR-TDE---E-LL----KAL----DS--FYVVEREGQIIACAALFPFFKEK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~-~~~~~-~~~---~-~~----~~l----~~--~~V~~~~g~iiG~~~l~~~~~~~ 512 (634)
..||+++++|++.+.+++....... ...++ +.+ . +. ..+ .. +++++.+|++||++.+.... ..
T Consensus 44 ~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~-~~ 122 (191)
T TIGR02382 44 PGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELN-DT 122 (191)
T ss_pred CcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecC-CC
Confidence 4799999999999999987654321 11111 111 1 11 111 12 23445678999999997553 34
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.++|..++|+|+|||||+|++|+ +.++++++++|+..|.+.+ ..+.+||+|
T Consensus 123 ~~~i~~l~V~p~~rGkG~G~~ll-------------------------~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~k 177 (191)
T TIGR02382 123 DARIGLLAVFPGAQSRGIGAELM-------------------------QTALNWCYARGLTRLRVATQMGNTAALRLYIR 177 (191)
T ss_pred ceEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHH
Confidence 57898999999999999999999 9999999999999999987 479999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||+..+.
T Consensus 178 lGF~~~~~ 185 (191)
T TIGR02382 178 SGANIEST 185 (191)
T ss_pred cCCccccc
Confidence 99998764
|
This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583). |
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.2e-11 Score=112.65 Aligned_cols=117 Identities=21% Similarity=0.277 Sum_probs=91.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC-c--EEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD-S--FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~-~--~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~ 525 (634)
..||+++.+|++.+.++... ....+++.+.+..... . .++++.++++||++.+.+.. ...++..++|+|+|
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~--~~~~~~~i~v~~~~ 75 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQR----AHAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVL--DEATLFNIAVDPDY 75 (146)
T ss_pred cchhcCChhhhHHHHHHHHh----cCCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeec--CceEEEEEEECHHH
Confidence 46999999999999998532 2223455555544332 2 23456789999999887543 34567789999999
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
||+|+|+.|+ +.+++.+++.++..+++.+ .++.+||++.||+..+.
T Consensus 76 rg~G~g~~ll-------------------------~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~ 125 (146)
T PRK09491 76 QRQGLGRALL-------------------------EHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTI 125 (146)
T ss_pred ccCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeee
Confidence 9999999999 8888999899999999876 46899999999998764
|
|
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.7e-11 Score=116.39 Aligned_cols=123 Identities=28% Similarity=0.339 Sum_probs=101.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc----C---cEEEEEEC-CeEEEEEEEeeecCCC----
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL----D---SFYVVERE-GQIIACAALFPFFKEK---- 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l----~---~~~V~~~~-g~iiG~~~l~~~~~~~---- 512 (634)
+.||+++..|++.|..|++..++++.. .+.+.+.+.+.. . +++|++.+ |+++|++.+.+|....
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 468999999999999999999988764 344666666544 1 56777665 9999999999886543
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.+|. +++|+|++||+|+|++|| +.+.+.+..+|+..+.... ..+..++++
T Consensus 82 tve~-SiYv~~~~~g~GiG~~Ll-------------------------~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~ 135 (169)
T COG1247 82 TVEL-SIYLDPAARGKGLGKKLL-------------------------QALITEARALGVRELVAGIESDNLASIALHEK 135 (169)
T ss_pred EEEE-EEEECcccccccHHHHHH-------------------------HHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHH
Confidence 2555 999999999999999999 8999999999998877766 358899999
Q ss_pred CCCeecccc
Q 006709 589 RGFRECSIE 597 (634)
Q Consensus 589 ~GF~~~~~~ 597 (634)
+||++++..
T Consensus 136 ~GF~~~G~~ 144 (169)
T COG1247 136 LGFEEVGTF 144 (169)
T ss_pred CCCEEeccc
Confidence 999999863
|
|
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-11 Score=115.43 Aligned_cols=119 Identities=19% Similarity=0.209 Sum_probs=87.0
Q ss_pred cccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc-CcEEEEE-ECCeEEEEEEEeeec-CCCeEEEEEEEECCCCcC
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVE-REGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 527 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~V~~-~~g~iiG~~~l~~~~-~~~~~ei~~l~V~p~~rg 527 (634)
||+++.+|++.|.+|+................+.+.. ..+++++ .++++||++.+.+.. .....++..++|+|+|||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 7999999999999997643111110001111122222 3466777 468999998765332 234578889999999999
Q ss_pred CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 528 qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
||+|++|+ +.+++++++.++..+.+.+ +.+++||+|+||+..
T Consensus 81 ~GiG~~L~-------------------------~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~ 126 (157)
T TIGR02406 81 KGLARRLL-------------------------EALLERVACERVRHLETTITPDNQASRALFKALARRRG 126 (157)
T ss_pred CcHHHHHH-------------------------HHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccC
Confidence 99999999 8888999899999998877 578999999999873
|
This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. |
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.9e-11 Score=131.39 Aligned_cols=191 Identities=15% Similarity=0.143 Sum_probs=121.8
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc----c-------------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK----Y------------------- 156 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~----~------------------- 156 (634)
++|.|+||+.+.+.+ ++.+++-|.. .+.++|+|.++-..++..|.++..... +
T Consensus 1 m~V~KFGGtSv~~~e~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~l~ 77 (448)
T PRK09084 1 LVVAKFGGTSVADFDAMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYAILDRLG 77 (448)
T ss_pred CEEEEECccCcCCHHHHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHhc
Confidence 479999999999865 6666665543 577888888885445444332210000 0
Q ss_pred -------------------cCCcc-CCCHHHHHHHHHHHhH-HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCc
Q 006709 157 -------------------LGRYR-ITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215 (634)
Q Consensus 157 -------------------~~G~R-vT~~~~l~~~~~a~G~-in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~ 215 (634)
..+.. ..++...+.+ .+.|+ +...+++. .|++.|++ +..+++.+-
T Consensus 78 ~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i-~s~GE~lSa~l~~~--------~L~~~Gi~----a~~l~~~~~- 143 (448)
T PRK09084 78 DPNVVREEIERLLENITVLAEAASLATSPALTDEL-VSHGELMSTLLFVE--------LLRERGVQ----AEWFDVRKV- 143 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhh-hhHHHHHHHHHHHH--------HHHhCCCC----cEEEchHHe-
Confidence 00000 0122233333 23443 34555555 48899998 566655442
Q ss_pred eeeeeecccccCccccccceE-----EEecHHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCC
Q 006709 216 FLAAKRKGVVDGVDYGATGEV-----KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEAD 286 (634)
Q Consensus 216 ~l~ak~~g~~~g~d~g~~G~v-----~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~Ad 286 (634)
+++.. +|+. .++ .....+.+..+++.+ |||+.+. +.+..|++..+ .+|..|+.+|..|+||
T Consensus 144 i~t~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~~G~~ttLgRggSD~~a~~~a~~l~a~ 213 (448)
T PRK09084 144 MRTDD--------RFGR-AEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDEKGRTTTLGRGGSDYSAALLAEALNAS 213 (448)
T ss_pred EEecC--------CCCc-ccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCCCCCEeecCCCchHHHHHHHHHHcCCC
Confidence 33311 1221 111 111124566677888 9999985 67788887765 8999999999999999
Q ss_pred EEEEeeccccc---C----CCCccccccCHHHHHHHHHh
Q 006709 287 KLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 287 kLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~ 318 (634)
.+++.|||||+ | |++++|++++.+|+.++...
T Consensus 214 ~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~ 252 (448)
T PRK09084 214 RVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATF 252 (448)
T ss_pred EEEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhC
Confidence 99999999997 3 46899999999999888643
|
|
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.2e-11 Score=111.20 Aligned_cols=120 Identities=27% Similarity=0.423 Sum_probs=89.3
Q ss_pred cccCccchHHHHHHhHHHHHHcccCcc----CCHHHHHhhc--------CcEEEEEE-CCeEEEEEEEeeecCC-CeEEE
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL--------DSFYVVER-EGQIIACAALFPFFKE-KCGEV 516 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~~~~----~~~~~~~~~l--------~~~~V~~~-~g~iiG~~~l~~~~~~-~~~ei 516 (634)
||+++++|++.|.+++........... .+.+.+.+.+ ..++++.. +|++||++.+.+.... ..+++
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 699999999999999976443333211 1222222222 24555555 9999999999876543 45666
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
+++|.|+||++|+|+.|+ +.+++.| ++.|++.|++.+ ..+..||+++||
T Consensus 81 -~~~v~~~~~~~gig~~l~-------------------------~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF 134 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLL-------------------------DELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGF 134 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHH-------------------------HHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTE
T ss_pred -eeEEChhHCCCcHHHHHH-------------------------HHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCC
Confidence 689999999999999999 9999999 999999999988 579999999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+..+.
T Consensus 135 ~~~g~ 139 (155)
T PF13420_consen 135 EEEGE 139 (155)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
|
... |
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.6e-11 Score=117.63 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=93.4
Q ss_pred ccccccCccchHHHHHHhHHHHHH-cccCccC-CHH-------HHHhh-c----C-cEEEEE-ECCeEEEEEEEeeecCC
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVE-SGALVRR-TDE-------ELLKA-L----D-SFYVVE-REGQIIACAALFPFFKE 511 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~-~~~~~~~-~~~-------~~~~~-l----~-~~~V~~-~~g~iiG~~~l~~~~~~ 511 (634)
-..||+++++|++.+.+++..... ..+..++ +.+ ++... . . .++|+. .++++||++.+... ..
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~-~~ 124 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLREL-ND 124 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEec-CC
Confidence 367999999999999999876533 2222111 111 11111 1 1 355555 46899999998754 33
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHH
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFK 587 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~ 587 (634)
..++|..++|+|+|||||+|++|+ ..+++++++.|++.+.+.+ +++.+||+
T Consensus 125 ~~~~i~~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~ye 179 (194)
T PRK10975 125 TDARIGLLAVFPGAQGRGIGARLM-------------------------QAALNWCQARGLTRLRVATQMGNLAALRLYI 179 (194)
T ss_pred CceEEEEEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEeCCCcHHHHHHHH
Confidence 458898899999999999999999 8999999999999999887 47899999
Q ss_pred hCCCeeccccc
Q 006709 588 SRGFRECSIEM 598 (634)
Q Consensus 588 k~GF~~~~~~~ 598 (634)
|+||+..++.+
T Consensus 180 k~Gf~~~~~~~ 190 (194)
T PRK10975 180 RSGANIESTAY 190 (194)
T ss_pred HCCCeEeEEEe
Confidence 99999977643
|
|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.1e-11 Score=131.31 Aligned_cols=192 Identities=16% Similarity=0.088 Sum_probs=116.7
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHc-CCccc------------c---cCCc-
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSER-GHEAK------------Y---LGRY- 160 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~l-g~~~~------------~---~~G~- 160 (634)
+.++|.|+||+.+.+.+ +.++++-|.. ..++|+|.++-..++..|.++ ..... + ....
T Consensus 1 ~~~~V~KFGGtSv~~~e~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~~~~~l~ 76 (440)
T PRK05925 1 MAPLVYKFGGTSLGTAESIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEEIAKELG 76 (440)
T ss_pred CCcEEEEECccccCCHHHHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 35789999999999855 5555555432 356788888754444443221 10000 0 0000
Q ss_pred ------------------cCCCHHHHHHHHHHHhH-HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeee
Q 006709 161 ------------------RITDSESLAAAMEAAGG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKR 221 (634)
Q Consensus 161 ------------------RvT~~~~l~~~~~a~G~-in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~ 221 (634)
...++...+.+. +.|+ +...+++. .|++.|++ +..+++.+- +++..
T Consensus 77 ~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~-s~GE~~Sa~l~a~--------~L~~~Gi~----a~~ld~~~~-i~t~~- 141 (440)
T PRK05925 77 IEFSLSPWWERLEHFEDVEEISSEDQARIL-AIGEDISASLICA--------YCCTYVLP----LEFLEARQV-ILTDD- 141 (440)
T ss_pred cchhhhHHHHHHHHHHHhCcCCchhhhhhe-ehhHHHHHHHHHH--------HHHhCCCC----eEEEcHHHh-EeecC-
Confidence 001122233332 3343 35556665 48889987 555554432 22211
Q ss_pred cccccCccccccceE--EEecHHHHHHHHcCCcEEEEcCC-ccCCCCcee---eechHHHHHHHHHHcCCCEEEEeeccc
Q 006709 222 KGVVDGVDYGATGEV--KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVL---NCNTYEVATACALAIEADKLICIIDGP 295 (634)
Q Consensus 222 ~g~~~g~d~g~~G~v--~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~---nid~D~lAa~LA~aL~AdkLI~LTDVd 295 (634)
.|+. ..+ ..+.....+..++.+.|||+.+. +.+.+|++. ..++|.+|+.+|..|+||.++++||||
T Consensus 142 -------~~~~-a~~~~~~~~~~~~~~~~~~~~v~Vv~GF~g~~~~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVd 213 (440)
T PRK05925 142 -------QYLR-AVPDLALMQTAWHELALQEDAIYIMQGFIGANSSGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVN 213 (440)
T ss_pred -------Cccc-cccCHHHHHHHHHHhhccCCcEEEecCcceeCCCCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCC
Confidence 1110 111 11222333335677889999986 778888866 458999999999999999999999999
Q ss_pred cc---C----CCCccccccCHHHHHHHHH
Q 006709 296 IL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 296 gl---d----~~gklI~~ls~~e~~~li~ 317 (634)
|+ | +++++|++++.+|+.++..
T Consensus 214 GvytaDP~~~~~A~~i~~is~~ea~ela~ 242 (440)
T PRK05925 214 GIYTMDPKIIKDAQLIPELSFEEMQNLAS 242 (440)
T ss_pred ccCCCCcCCCCCCeEeeEECHHHHHHHHh
Confidence 97 3 4689999999999888753
|
|
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.5e-11 Score=141.83 Aligned_cols=203 Identities=16% Similarity=0.074 Sum_probs=120.4
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc---c--------------cCCc
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK---Y--------------LGRY 160 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~---~--------------~~G~ 160 (634)
++++|.|+||+.+.+.+ ++++++-|..-.+.+.++|+|.++...++..|.++-.... + ...+
T Consensus 7 ~~~~V~KFGGtSv~~~~~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 86 (861)
T PRK08961 7 DRWVVLKFGGTSVSRRHRWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRHRELLAEL 86 (861)
T ss_pred CCcEEEEECccccCCHHHHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999998866 7777777665445678888888875444433322210000 0 0000
Q ss_pred -------------------------cCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCC
Q 006709 161 -------------------------RITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASG 214 (634)
Q Consensus 161 -------------------------RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg 214 (634)
+-.++...+.+ .+.|+. +..|+++ .|++.|++ +..+++.+-
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i-~s~GE~lSa~lla~--------~L~~~Gi~----a~~ld~~~~ 153 (861)
T PRK08961 87 GVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEV-LGQGELLSTTLGAA--------YLEASGLD----MGWLDAREW 153 (861)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheE-EEehHHHHHHHHHH--------HHHhCCCC----cEEEcHHHh
Confidence 00011111111 123322 3444444 58889988 444443332
Q ss_pred ceeeeeec-ccccCccccccceE-EEecHHHHHHHHcCC-cEEEEcCC-ccCCCCceee---echHHHHHHHHHHcCCCE
Q 006709 215 NFLAAKRK-GVVDGVDYGATGEV-KKVDVTRMRERLDGG-CLVILSNL-GYSSSGEVLN---CNTYEVATACALAIEADK 287 (634)
Q Consensus 215 ~~l~ak~~-g~~~g~d~g~~G~v-~~vd~~~I~~LLd~G-~IPVv~~v-~~~~~Gei~n---id~D~lAa~LA~aL~Adk 287 (634)
+..... .......+. ...+ ...+...++.+++.+ .|||+.+. +.+..|++.. .++|.+|+.+|.+|+||+
T Consensus 154 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~g~~ttLgrggsD~~A~~iA~~l~a~~ 230 (861)
T PRK08961 154 --LTALPQPNQSEWSQYL-SVSCQWQSDPALRERFAAQPAQVLITQGFIARNADGGTALLGRGGSDTSAAYFAAKLGASR 230 (861)
T ss_pred --EeecCccccccccccc-cceecHhhHHHHHHHHhccCCeEEEeCCcceeCCCCCEEEEeCCchHHHHHHHHHHcCCCE
Confidence 221110 000000000 0011 113456777777766 49999986 6777887664 489999999999999999
Q ss_pred EEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 288 LICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 288 LI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
|+++|||+|+ | +++++|++|+.+|+.++..
T Consensus 231 ~~i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~ 267 (861)
T PRK08961 231 VEIWTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT 267 (861)
T ss_pred EEEEeCCCccccCCCCCCCCceEecccCHHHHHHHHH
Confidence 9999999997 3 3678999999999988764
|
|
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-11 Score=112.46 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=90.6
Q ss_pred cccccCccchHHHHHHhHHHHHH-cc--cCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCC---CeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-SG--ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKE---KCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-~~--~~~~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~~---~~~ei~ 517 (634)
..+|+++.+|++.+.++...... .. .....+.+.+...+ ..+++++.++++||++.+.....+ ..+++
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~- 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF- 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE-
Confidence 35899999999999999753210 00 11122444554443 146788889999999998754221 23555
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCCCe
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
.++|+|+|||||+|+.|+ +.+.+++.+ .++..+.+.+ +++.+||+++||+
T Consensus 83 ~~~v~p~~rg~Gig~~ll-------------------------~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~ 137 (162)
T PRK10140 83 GICVDSRWKNRGVASALM-------------------------REMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFE 137 (162)
T ss_pred EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCE
Confidence 699999999999999999 888888877 6889888877 5799999999999
Q ss_pred eccc
Q 006709 593 ECSI 596 (634)
Q Consensus 593 ~~~~ 596 (634)
.++.
T Consensus 138 ~~g~ 141 (162)
T PRK10140 138 IEGT 141 (162)
T ss_pred EEee
Confidence 9775
|
|
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.6e-11 Score=98.58 Aligned_cols=75 Identities=36% Similarity=0.709 Sum_probs=63.9
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.+++++++++++|++.+.+. +...+|..++|+|+|||||+|++|+ +++.+.+
T Consensus 4 ~~~~~~~~~~ivG~~~~~~~--~~~~~i~~~~v~~~~rg~Gig~~ll-------------------------~~~~~~~- 55 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWPN--EDFAYIGYLAVDPEYRGKGIGSKLL-------------------------NYLLEKA- 55 (79)
T ss_dssp EEEEEEETTEEEEEEEEEET--TTEEEEEEEEE-GGGTTSSHHHHHH-------------------------HHHHHHH-
T ss_pred EEEEEEECCEEEEEEEEEEc--CCEEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHc-
Confidence 57899999999999999754 3588999999999999999999999 8887777
Q ss_pred HcCCcEEEEec-HHhHHHHHhCCCee
Q 006709 569 SLGLDMLFLLT-TRTADWFKSRGFRE 593 (634)
Q Consensus 569 ~~g~~~l~l~t-~~a~~~Y~k~GF~~ 593 (634)
+.+.+++.+ ..+.+||+++||++
T Consensus 56 --~~~~i~l~~~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 56 --KSKKIFLFTNPAAIKFYEKLGFEE 79 (79)
T ss_dssp --TCSEEEEEEEHHHHHHHHHTTEEE
T ss_pred --CCCcEEEEEcHHHHHHHHHCcCCC
Confidence 446677776 67899999999985
|
... |
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.7e-10 Score=118.06 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=60.5
Q ss_pred cCCcEEEEcCC-ccCCCCceee---echHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 249 DGGCLVILSNL-GYSSSGEVLN---CNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 249 d~G~IPVv~~v-~~~~~Gei~n---id~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
..+.|||+.+. +.+..|++.. .++|..|+.+|..|+|+.+++.|||+|+ | +++++|+.++.+|+.++..
T Consensus 176 ~~~~v~Vv~Gf~g~~~~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~ 255 (292)
T cd04258 176 LAGTVVVTQGFIGSTEKGRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMAT 255 (292)
T ss_pred hcCCEEEECCccccCCCCCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHH
Confidence 45689999985 6677888774 5899999999999999999999999997 3 4689999999999998865
Q ss_pred hh
Q 006709 318 QR 319 (634)
Q Consensus 318 ~~ 319 (634)
.|
T Consensus 256 ~G 257 (292)
T cd04258 256 FG 257 (292)
T ss_pred CC
Confidence 43
|
AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. |
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.5e-10 Score=102.79 Aligned_cols=108 Identities=24% Similarity=0.382 Sum_probs=83.1
Q ss_pred hHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHH
Q 006709 458 DLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 533 (634)
Q Consensus 458 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~ 533 (634)
|++.+.++.... +..+++.+.+...+ ..++++..++++||++.+... ....++..++|+|+|||||+|++
T Consensus 1 d~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~i~~~~v~~~~rg~G~g~~ 74 (131)
T TIGR01575 1 DLKAVLEIEAAA----FAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIV--LDEAHILNIAVKPEYQGQGIGRA 74 (131)
T ss_pred CHHHHHHHHHhh----CCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEec--CCCeEEEEEEECHHHcCCCHHHH
Confidence 566677764332 22345555555554 245667778999999997743 24567889999999999999999
Q ss_pred HHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 534 LLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 534 Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+ +++++.+.+.+++.+.+.+ ..+.+||+++||+..+.
T Consensus 75 ll-------------------------~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~ 116 (131)
T TIGR01575 75 LL-------------------------RELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAI 116 (131)
T ss_pred HH-------------------------HHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCcccc
Confidence 99 9999999999999998876 46889999999998765
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. |
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=109.71 Aligned_cols=126 Identities=25% Similarity=0.275 Sum_probs=90.6
Q ss_pred cccCc-cchHHHHHHhHHHHH-HcccCccCC---HHHHHhhcC-----cEEEEEECCeEEEEEEEeeec-----CCCeEE
Q 006709 451 TRTAK-VTDLSGIKQIIQPLV-ESGALVRRT---DEELLKALD-----SFYVVEREGQIIACAALFPFF-----KEKCGE 515 (634)
Q Consensus 451 iR~a~-~~D~~~i~~l~~~~~-~~~~~~~~~---~~~~~~~l~-----~~~V~~~~g~iiG~~~l~~~~-----~~~~~e 515 (634)
+|+++ .+|++.|.++++... ...+...++ .+++.+.+. ..+|++.+|+++|++.+.... .+....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 69999 999999999986442 222222222 334444442 589999999999999886421 334567
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+..++|+|+|||||+|++++ ..+.+.+.+. +++.|.+.+ .+++++|+|.|
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~-------------------------~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~G 135 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAML-------------------------RALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAG 135 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHH-------------------------HHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT
T ss_pred EeeeeechhhcCCCHHHHHH-------------------------HHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcC
Confidence 88889999999999999999 6666776655 899999988 57999999999
Q ss_pred Ceecccccchh
Q 006709 591 FRECSIEMIPE 601 (634)
Q Consensus 591 F~~~~~~~~~~ 601 (634)
|+.++.-.+|.
T Consensus 136 F~~~g~~~~~~ 146 (152)
T PF13523_consen 136 FRKVGEFEFPD 146 (152)
T ss_dssp -EEEEEEEESS
T ss_pred CEEeeEEECCC
Confidence 99999877764
|
|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.9e-10 Score=132.84 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=62.8
Q ss_pred HHHHHH-HcCCcEEEEcCC-ccCCCCceeeec---hHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCH
Q 006709 242 TRMRER-LDGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTL 309 (634)
Q Consensus 242 ~~I~~L-Ld~G~IPVv~~v-~~~~~Gei~nid---~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~ 309 (634)
..|+++ .+.+.|||+.+. +.+..|++..+. +|.+|+.+|..|+||.++++|||||+ | +++++|++++.
T Consensus 172 ~~i~~~~~~~~~v~Vv~Gfig~~~~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy 251 (819)
T PRK09436 172 RRIAASFIPADHVILMPGFTAGNEKGELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSY 251 (819)
T ss_pred HHHHHHHhcCCcEEEecCcccCCCCCCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecH
Confidence 455554 456899999986 667788877664 89999999999999999999999997 3 46899999999
Q ss_pred HHHHHHH
Q 006709 310 QEADSLI 316 (634)
Q Consensus 310 ~e~~~li 316 (634)
+|+.++.
T Consensus 252 ~ea~el~ 258 (819)
T PRK09436 252 QEAMELS 258 (819)
T ss_pred HHHHHHH
Confidence 9988874
|
|
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-09 Score=120.70 Aligned_cols=194 Identities=15% Similarity=0.140 Sum_probs=123.7
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchH-------HHHHHHHHcCC-ccc----------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHV-------QIDKLLSERGH-EAK---------------- 155 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~-------~I~~~l~~lg~-~~~---------------- 155 (634)
+.|.|+||+.+.+.+ ++.+++-|. +.+.++|+|.++-. .++..|.++.. ..+
T Consensus 1 m~V~KFGGtSv~~~~~i~~v~~ii~---~~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (454)
T PRK09034 1 MKVVKFGGSSLASAEQFKKVLNIVK---SDPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEAIIARYA 77 (454)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHh---ccCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 368999999998854 555555443 34667888888632 23333322110 000
Q ss_pred ----------------------ccCCccCCCHHHHHHHHHHHh-HHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeecc
Q 006709 156 ----------------------YLGRYRITDSESLAAAMEAAG-GIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA 212 (634)
Q Consensus 156 ----------------------~~~G~RvT~~~~l~~~~~a~G-~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~ 212 (634)
........++..++.+. +.| .++..+++. .|++.|++ +..+++.
T Consensus 78 ~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~-s~GE~~S~~l~a~--------~L~~~g~~----a~~~~~~ 144 (454)
T PRK09034 78 EIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFK-ARGEDLNAKLIAA--------YLNYEGIP----ARYVDPK 144 (454)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHH-HHHHHHHHHHHHH--------HHHhCCCC----cEEEchH
Confidence 00000111233344333 344 335556665 47889988 5555555
Q ss_pred CCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEE
Q 006709 213 SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKL 288 (634)
Q Consensus 213 dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkL 288 (634)
+-.+++.. +++. ..+.....+.+..++..+.|||+.+. +.+..|++..+ .+|..|+.+|.+|+||.+
T Consensus 145 ~~~~~t~~--------~~~~-a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~~g~~ttlgRggSD~tA~~la~~l~A~~~ 215 (454)
T PRK09034 145 EAGIIVTD--------EPGN-AQVLPESYDNLKKLRDRDEKLVIPGFFGVTKDGQIVTFSRGGSDITGAILARGVKADLY 215 (454)
T ss_pred HceEEecC--------CcCc-eeEcHhhHHHHHHHHhcCCEEEecCccccCCCCCEEecCCCcHHHHHHHHHHHcCCCEE
Confidence 44344322 1221 12323356777777778889999985 77888887755 689999999999999999
Q ss_pred EEeeccccc---C----CCCccccccCHHHHHHHHHhh
Q 006709 289 ICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 289 I~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~ 319 (634)
.+.|||||+ | |+++++++++.+|+.++...|
T Consensus 216 ~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~ela~~G 253 (454)
T PRK09034 216 ENFTDVDGIYAANPRIVKNPKSIKEITYREMRELSYAG 253 (454)
T ss_pred EEEecCCccCcCCCCCCCCCeECCccCHHHHHHHHhCC
Confidence 999999997 4 578999999999999986443
|
|
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.9e-10 Score=108.67 Aligned_cols=123 Identities=23% Similarity=0.306 Sum_probs=94.0
Q ss_pred ccccccccCccchHH--HHHHhHHHHHHcccC--ccCCHHHHHhhc----CcEEEEEE---CC----eEEEEEEEeeecC
Q 006709 446 DLYEGTRTAKVTDLS--GIKQIIQPLVESGAL--VRRTDEELLKAL----DSFYVVER---EG----QIIACAALFPFFK 510 (634)
Q Consensus 446 D~Ye~iR~a~~~D~~--~i~~l~~~~~~~~~~--~~~~~~~~~~~l----~~~~V~~~---~g----~iiG~~~l~~~~~ 510 (634)
.....+|++..+|+. .+..+.. ..+. .+|+.+.+...+ ..++++.. ++ +++|++.......
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~ 84 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEA----RTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDG 84 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhh----hcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecC
Confidence 445679999999999 6666632 2232 456777776666 35666665 33 5999999863333
Q ss_pred C----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC-cEEEEec----HH
Q 006709 511 E----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL-DMLFLLT----TR 581 (634)
Q Consensus 511 ~----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~-~~l~l~t----~~ 581 (634)
. ..++|..|+|+|+|||+|||++|+ +.+++.+++.+. ..+.|.+ ..
T Consensus 85 ~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll-------------------------~~~~~~~~~~~~~~~~~L~V~~~N~~ 139 (177)
T COG0456 85 RPSADHEGHIYNLAVDPEYRGRGIGRALL-------------------------DEALERLRERGLADKIVLEVRESNEA 139 (177)
T ss_pred CccccCccEEEEEEEChHhhcCCHHHHHH-------------------------HHHHHHHHhcCCCceEEEEEecCChH
Confidence 2 278999999999999999999999 888888888886 8888888 57
Q ss_pred hHHHHHhCCCeecccc
Q 006709 582 TADWFKSRGFRECSIE 597 (634)
Q Consensus 582 a~~~Y~k~GF~~~~~~ 597 (634)
|+.||+++||+...+.
T Consensus 140 Ai~lY~~~GF~~~~~~ 155 (177)
T COG0456 140 AIGLYRKLGFEVVKIR 155 (177)
T ss_pred HHHHHHHcCCEEEeee
Confidence 9999999999997653
|
|
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.4e-10 Score=108.06 Aligned_cols=118 Identities=14% Similarity=0.165 Sum_probs=84.4
Q ss_pred cccCccchHHHHHHhHHHHH--HcccCccCCHHHHHhh----cCcEEEEEECCeEEEEEEEeeecCC-CeEEEEEEEECC
Q 006709 451 TRTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKA----LDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSP 523 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~--~~~~~~~~~~~~~~~~----l~~~~V~~~~g~iiG~~~l~~~~~~-~~~ei~~l~V~p 523 (634)
+...+.+++..+..|-.... +.+... +++... ....+++..++++||++.+.+.... ..++|..++|+|
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~----~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~ 84 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPY----QDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSE 84 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCc----cccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECH
Confidence 45666777777777755443 223321 122111 1235566789999999999864322 357899999999
Q ss_pred CCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec-HHhHHHHHhCCCeecccc
Q 006709 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 524 ~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
+|||+|+|++|| +.+++.+++. +...+++.+ ..+..||+++||+..+..
T Consensus 85 ~~rG~GiG~~Lm-------------------------~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 85 ALRGEKVGQQLM-------------------------SKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEV 135 (153)
T ss_pred HHhCCCHHHHHH-------------------------HHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCCc
Confidence 999999999999 7777777664 778888887 457899999999997753
|
|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.3e-10 Score=127.99 Aligned_cols=120 Identities=19% Similarity=0.263 Sum_probs=93.5
Q ss_pred cccccC-ccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEE--CCeEEEEEEEeee-----cCCCeEEE
Q 006709 449 EGTRTA-KVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER--EGQIIACAALFPF-----FKEKCGEV 516 (634)
Q Consensus 449 e~iR~a-~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~--~g~iiG~~~l~~~-----~~~~~~ei 516 (634)
..||++ +.+|++.|.+|++.. + ..+++.+.+...+ ..++|++. +|++|||+..... .....++|
T Consensus 83 ~~IR~~~~~~D~~~I~~L~~~~---~-~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i 158 (547)
T TIGR03103 83 FTVRRLRGPADVDAINRLYAAR---G-MVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSL 158 (547)
T ss_pred cEEEeCCChhHHHHHHHHHHhc---C-CCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEE
Confidence 578997 789999999998652 2 2344555554443 25788875 6999999976422 11234789
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCe
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
..|+|+|+|||||+|++|| +.+++.+++.|+..+++.+ ..|.+||+++||+
T Consensus 159 ~~l~V~P~~Rg~GIG~~Ll-------------------------~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~ 213 (547)
T TIGR03103 159 WCLAVDPQAAHPGVGEALV-------------------------RALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFR 213 (547)
T ss_pred EEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCE
Confidence 9999999999999999999 9999999999999999887 4789999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
.....
T Consensus 214 ~~~~y 218 (547)
T TIGR03103 214 RIPVF 218 (547)
T ss_pred EeeEE
Confidence 87653
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.5e-10 Score=103.73 Aligned_cols=114 Identities=18% Similarity=0.246 Sum_probs=79.4
Q ss_pred cccccCccchHHHHHHhHHHHHHc--ccCccCCHHHHHhhc------CcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL------DSFYVVE-REGQIIACAALFPFFKEKCGEVAAI 519 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~l------~~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l 519 (634)
..||+++++|++.+.+++...... ....+.+.+.+.+.+ ..++++. .++++||++.+.+ .++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~------~~~~~~ 75 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG------GHMEAL 75 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec------CcEeEE
Confidence 358999999999999998754321 122222333333222 2344554 5899999998763 246689
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
+|+|+|||||+|++|+ +++.+.+. .+.+.+ +++.+||+|+||+.++
T Consensus 76 ~v~p~~rgkGig~~Ll-------------------------~~~~~~~~-----~i~~~v~~~N~~a~~~yek~Gf~~~~ 125 (145)
T PRK10514 76 FVDPDVRGCGVGRMLV-------------------------EHALSLHP-----ELTTDVNEQNEQAVGFYKKMGFKVTG 125 (145)
T ss_pred EECHHhccCCHHHHHH-------------------------HHHHHhcc-----ccEEEeecCCHHHHHHHHHCCCEEec
Confidence 9999999999999999 77766542 333333 5799999999999987
Q ss_pred ccc
Q 006709 596 IEM 598 (634)
Q Consensus 596 ~~~ 598 (634)
...
T Consensus 126 ~~~ 128 (145)
T PRK10514 126 RSE 128 (145)
T ss_pred ccc
Confidence 643
|
|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-09 Score=113.17 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=59.8
Q ss_pred CCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHh
Q 006709 250 GGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 250 ~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~ 318 (634)
.+.|||+.+. +.+..|++..+ .+|..|+.+|..|+|+.+++.|||+|+ | +++++|++|+.+|+.++...
T Consensus 189 ~~~v~Vv~GFig~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~ 268 (306)
T cd04247 189 ENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY 268 (306)
T ss_pred CCceEEeeccEecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC
Confidence 5779999986 66777887755 689999999999999999999999997 3 46899999999999988654
Q ss_pred h
Q 006709 319 R 319 (634)
Q Consensus 319 ~ 319 (634)
+
T Consensus 269 G 269 (306)
T cd04247 269 G 269 (306)
T ss_pred c
Confidence 3
|
Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. |
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.9e-10 Score=105.86 Aligned_cols=98 Identities=21% Similarity=0.224 Sum_probs=74.3
Q ss_pred cEEEEEECCe--EEEEEEEeee--cCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH
Q 006709 489 SFYVVEREGQ--IIACAALFPF--FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE 564 (634)
Q Consensus 489 ~~~V~~~~g~--iiG~~~l~~~--~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 564 (634)
.++++..|++ .||++...-- .+..+++|..++|+++|||||||++|+ +.++
T Consensus 56 ~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLv-------------------------r~aI 110 (165)
T KOG3139|consen 56 CFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALV-------------------------RKAI 110 (165)
T ss_pred eEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHH-------------------------HHHH
Confidence 4555554433 4887776421 123579999999999999999999999 8999
Q ss_pred HHHHHcCCcEEEEec----HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEe
Q 006709 565 KKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 618 (634)
Q Consensus 565 ~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k 618 (634)
+.+++.|+..|.|.| ..|.++|+++||+..... .+|.+.+...+.|+
T Consensus 111 d~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~-------~~YYlng~dA~rl~ 161 (165)
T KOG3139|consen 111 DAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRL-------FRYYLNGMDALRLK 161 (165)
T ss_pred HHHHHCCCcEEEEeccccchHHHHHHHhcCceEecce-------eEEEECCcceEEEE
Confidence 999999999999999 469999999999885532 24555555555554
|
|
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.7e-10 Score=102.07 Aligned_cols=122 Identities=24% Similarity=0.389 Sum_probs=98.8
Q ss_pred cccccCccchHHH-HHHhHHHHHHcccCccCCHHHHHhhc-------CcEEE--EEE--CCeEEEEEEEeeec-----CC
Q 006709 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------DSFYV--VER--EGQIIACAALFPFF-----KE 511 (634)
Q Consensus 449 e~iR~a~~~D~~~-i~~l~~~~~~~~~~~~~~~~~~~~~l-------~~~~V--~~~--~g~iiG~~~l~~~~-----~~ 511 (634)
.++|++..+|+.. ..++..++...+.. +++++.+.+ +.+++ +++ .++|||.+.+..-. -.
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v---t~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV---TREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc---CHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 4799999999996 78888777777776 556665554 22333 333 48999999997422 23
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
.++.|..+.|+++||||++|+.|+ +.+.+.++++|+-.+.|.+ +....||+|+|
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv-------------------------~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG 138 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLV-------------------------ETLVDLAKSLGCYKIILDCDPKNVKFYEKCG 138 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHH-------------------------HHHHHHHHhcCcEEEEEecchhhhhHHHHcC
Confidence 568999999999999999999999 9999999999999999999 66899999999
Q ss_pred Ceeccccc
Q 006709 591 FRECSIEM 598 (634)
Q Consensus 591 F~~~~~~~ 598 (634)
|...+.+|
T Consensus 139 ~s~~~~~M 146 (150)
T KOG3396|consen 139 YSNAGNEM 146 (150)
T ss_pred ccccchhh
Confidence 99877665
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=116.33 Aligned_cols=119 Identities=14% Similarity=0.210 Sum_probs=94.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcc-cCccCCHHHHHhhcC--cEEEEEE-----CCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD--SFYVVER-----EGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~-~~~~~~~~~~~~~l~--~~~V~~~-----~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
.+||+++++|++.+.+|.+...... ...+++.+++.+.+. .++++.. ++.+||++.+.+ .....+|..++
T Consensus 187 ~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~d~~gd~givG~~~~~~--~~~~~~I~~l~ 264 (320)
T TIGR01686 187 LNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMSDRFGDSGIIGIFVFEK--KEGNLFIDDLC 264 (320)
T ss_pred EEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEEecCCCCceEEEEEEEe--cCCcEEEEEEE
Confidence 4699999999999999986542221 124567777777663 3444442 578999998764 34567899999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhCCCeec
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFREC 594 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~GF~~~ 594 (634)
|+|++||+|+|++|| .++.+.|++.|++.+++.+ .+|++||+++||+..
T Consensus 265 vs~r~~grGig~~Ll-------------------------~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 265 MSCRALGRGVETRML-------------------------RWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EcHhHhcCcHHHHHH-------------------------HHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 999999999999999 9999999999999998865 469999999999863
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-09 Score=117.83 Aligned_cols=197 Identities=16% Similarity=0.152 Sum_probs=122.0
Q ss_pred CeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHc-------CCcc-----------------
Q 006709 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSER-------GHEA----------------- 154 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~l-------g~~~----------------- 154 (634)
-++|.|+||+.+.+.+ ++++++-|..- ...++|+|.++-.-++..|-++ +.+.
T Consensus 52 ~~~V~KFGGtSv~~~e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i~~~h~~~ 129 (521)
T PLN02551 52 LTVVMKFGGSSVASAERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAIRELHLRT 129 (521)
T ss_pred ceEEEEECCCccCCHHHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence 4679999999999866 77777666542 2345778887633333333221 0000
Q ss_pred --------c-----------ccCCc---cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeecc
Q 006709 155 --------K-----------YLGRY---RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVA 212 (634)
Q Consensus 155 --------~-----------~~~G~---RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~ 212 (634)
. ...|. +..++...+.+......+...|+++ .|++.|++ +..+++.
T Consensus 130 ~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~--------~L~~~Gi~----a~~lda~ 197 (521)
T PLN02551 130 ADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAA--------YLNKIGVK----ARQYDAF 197 (521)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHH--------HHHHCCCC----cEEechH
Confidence 0 00010 0112233333332222334556665 47889988 5666655
Q ss_pred CCceeeeeecccccCccccccceEEEecHHHHHHHH-----cCCcEEEEcCC-ccC-CCCceeee---chHHHHHHHHHH
Q 006709 213 SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL-----DGGCLVILSNL-GYS-SSGEVLNC---NTYEVATACALA 282 (634)
Q Consensus 213 dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL-----d~G~IPVv~~v-~~~-~~Gei~ni---d~D~lAa~LA~a 282 (634)
+-.+++.. .|+. ..+.......+.+.+ +.+.|||+.+. +.+ .+|++..+ -+|..|+.+|.+
T Consensus 198 ~~gi~t~~--------~~~~-a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~~G~~ttLGRGGSD~sA~~la~~ 268 (521)
T PLN02551 198 DIGFITTD--------DFTN-ADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWKTGAITTLGRGGSDLTATTIGKA 268 (521)
T ss_pred HcceEecC--------CCCc-cchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCCCCcEEecCCChHHHHHHHHHHH
Confidence 54444422 2221 122223334444443 45689999986 777 78988765 589999999999
Q ss_pred cCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhh
Q 006709 283 IEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 283 L~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~ 319 (634)
|+|+.+.+.|||||+ | +++++|++|+.+|+.++..-|
T Consensus 269 L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~G 312 (521)
T PLN02551 269 LGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFG 312 (521)
T ss_pred cCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCC
Confidence 999999999999997 4 478999999999999886544
|
|
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-09 Score=103.08 Aligned_cols=138 Identities=17% Similarity=0.249 Sum_probs=105.8
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecCC----CeEE
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKE----KCGE 515 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~~~----~~~e 515 (634)
++.||+.++.|++.|.++....+.. ....++.+++ ..-+|++++|++||++.+++..-. ...-
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~~-----~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~ 77 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFGP-----GREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLG 77 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhhc-----chHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEE
Confidence 4679999999999999997655542 1223333333 256889999999999999886433 3356
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecc
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 595 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~ 595 (634)
++-|+|+|+|||||||++|+ ...++.++..|...+.+.- ...+|.+.||+.+.
T Consensus 78 LaPLaV~p~~qg~GIG~~Lv-------------------------r~~le~a~~~G~~~v~vlG--dp~YY~rfGF~~~~ 130 (171)
T COG3153 78 LAPLAVDPEYQGQGIGSALV-------------------------REGLEALRLAGASAVVVLG--DPTYYSRFGFEPAA 130 (171)
T ss_pred EEeEEEchhhcCCcHHHHHH-------------------------HHHHHHHHHCCCCEEEEec--CcccccccCcEEcc
Confidence 78899999999999999999 8888999999999988774 46799999999988
Q ss_pred cccchhHhhhhccCCCCceEEEeecCC
Q 006709 596 IEMIPEERRKRINLSRNSKYYMKKLLP 622 (634)
Q Consensus 596 ~~~~~~~~~~~~~~~~~s~~~~k~l~~ 622 (634)
...++... ...+..++.+.|..
T Consensus 131 ~~~l~~p~-----~~~~~~fl~~~L~~ 152 (171)
T COG3153 131 GAKLYAPG-----PVPDERFLALELGD 152 (171)
T ss_pred ccccccCC-----CCCCceEEEEEccC
Confidence 77666321 13466666687764
|
|
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.4e-09 Score=117.40 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=91.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHh---hc--CcEEEEEECCeEEEEEEEeeec-----C--CCeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---AL--DSFYVVEREGQIIACAALFPFF-----K--EKCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~---~l--~~~~V~~~~g~iiG~~~l~~~~-----~--~~~~ei 516 (634)
..||+++.+|++++.+|........ .+.+.+.. .. ..+++++.+++++|++.+.++. . .+.++|
T Consensus 7 ~~iR~~~~~D~~~i~~L~~~~f~~~----~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i 82 (411)
T PRK01346 7 ITIRTATEEDWPAWFRAAATGFGDS----PSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGV 82 (411)
T ss_pred ceeecCCHHHHHHHHHHHHHHcCCC----CChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEE
Confidence 4699999999999999976443221 12222222 22 3578888999999999987653 1 145889
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
..++|+|+|||||+|++|| +++++.+++.|+..+.+... ...||+++||..+..
T Consensus 83 ~~v~V~P~~RgrGig~~Ll-------------------------~~~l~~a~~~g~~~~~L~~~-~~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 83 TAVTVAPTHRRRGLLTALM-------------------------REQLRRIRERGEPVAALTAS-EGGIYGRFGYGPATY 136 (411)
T ss_pred EEEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEECC-chhhHhhCCCeeccc
Confidence 9999999999999999999 89999999999988877763 357999999988754
|
|
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-08 Score=98.47 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=51.1
Q ss_pred cCCcEEEEcCC----ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC---CCCccccccCHHHHH
Q 006709 249 DGGCLVILSNL----GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---ESGHLIRFLTLQEAD 313 (634)
Q Consensus 249 d~G~IPVv~~v----~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld---~~gklI~~ls~~e~~ 313 (634)
..+.+||+-|- -.|.--..+-+-+|.+|.++|.+++|.++|+.|||||+. ++++++++|+..|+.
T Consensus 91 ~~~~~aVLLPyrlLr~~DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~~~kLv~eI~A~dl~ 162 (212)
T COG2054 91 KPDAKAVLLPYRLLRKTDPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDPKGKLVREIRASDLK 162 (212)
T ss_pred CcccceEeeehHhhhcCCCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCCcchhhhhhhHhhcc
Confidence 45667777653 234445678899999999999999999999999999973 567899988876654
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.5e-09 Score=109.42 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=82.8
Q ss_pred ccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
.+++++|+++|.+|+..........+++.+. ...+ ...+++..++++||++.+.+.. ....++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~-~~~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQV-LRGLREPGAGHTRHLVAVDSDPIVGYANLVPAR-GTDPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHH-HhhccccCCCCceEEEEEECCEEEEEEEEEcCC-CCcceEEEEEECHh
Confidence 3578899999999987655543333444433 3333 1467888899999999988653 23467889999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|| +.+++.+. ..+.+.+ ..|++||+++||+....
T Consensus 82 ~rg~GiG~~Ll-------------------------~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 82 HRRRGIGRALI-------------------------RALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred hcCCCHHHHHH-------------------------HHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 99999999999 66666653 3344444 46899999999987653
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.3e-09 Score=97.29 Aligned_cols=112 Identities=19% Similarity=0.302 Sum_probs=76.8
Q ss_pred ccccCccchHHHHHHhHHHHHHc-ccCccC-----CHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVES-GALVRR-----TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~-~~~~~~-----~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
.||+++.+|++.+.+++...... ...... ..+.+.+.. ..++++..++++||++.+... .++..++
T Consensus 1 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~-----~~i~~~~ 75 (145)
T PRK10562 1 MIREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG-----RFVGALF 75 (145)
T ss_pred CcccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec-----cEEEEEE
Confidence 38999999999999997532111 000000 011111111 246778888999999988632 3577899
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|||+|+|+.|+ +++++.+ ..+.+.+ ..+.+||+|+||+.++.
T Consensus 76 v~~~~rg~G~g~~ll-------------------------~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~~ 125 (145)
T PRK10562 76 VAPKAVRRGIGKALM-------------------------QHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVDS 125 (145)
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEccc
Confidence 999999999999999 6666643 3344434 57899999999999875
|
|
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.5e-09 Score=99.65 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=78.3
Q ss_pred CccchHHHHHHhHHHHHHcccCc-cC-CHHH----HHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEE---EEEEE
Q 006709 454 AKVTDLSGIKQIIQPLVESGALV-RR-TDEE----LLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE---VAAIG 520 (634)
Q Consensus 454 a~~~D~~~i~~l~~~~~~~~~~~-~~-~~~~----~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~e---i~~l~ 520 (634)
|+.+|++.+..|......+.... ++ +.++ +.+.+ ...++++.++++||++.+.+.......+ +..|+
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lY 88 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQY 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEE
Confidence 56778888888765443332211 01 1122 22111 2357788899999999987544332333 45579
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
|+|+|||+|+|++|| +.+++.|++.|+..|.+.+ .+|..||++.
T Consensus 89 V~pe~RG~GiG~~Ll-------------------------~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 89 VLPEYRNAGVAREFL-------------------------RELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 999999999999999 9999999999999998888 4689999973
|
|
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.8e-09 Score=103.75 Aligned_cols=108 Identities=19% Similarity=0.357 Sum_probs=77.5
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeec---------CCCeEEEEE
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF---------KEKCGEVAA 518 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~---------~~~~~ei~~ 518 (634)
+.+||++..+|+++|.++....... ..-..++++..++++||++.+.... .....+|..
T Consensus 17 ~~~~~~~~~~dl~~l~~l~~~~f~~------------~~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~ 84 (156)
T PRK13688 17 FKKFREFGNQELSMLEELQANIIEN------------DSESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWK 84 (156)
T ss_pred HHHHHHhcHHHHHHHHhhhhhEeec------------CCCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEE
Confidence 3468999999999998884332211 0123678888999999998774321 234578999
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccc
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
++|+|+|||||+|++|+ +++. +.++. +.+.. ..+.+||+|+||+..+..
T Consensus 85 l~V~p~~rgkGiG~~Ll-------------------------~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 85 LEVLPKYQNRGYGEMLV-------------------------DFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EEECHHHcCCCHHHHHH-------------------------HHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence 99999999999999999 5433 33443 33332 468899999999988765
|
|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.3e-09 Score=96.70 Aligned_cols=121 Identities=20% Similarity=0.200 Sum_probs=88.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHH---hhc-----CcEEEEEECCeEEEEEEEeeecC-CCeEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELL---KAL-----DSFYVVEREGQIIACAALFPFFK-EKCGEVA 517 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~---~~l-----~~~~V~~~~g~iiG~~~l~~~~~-~~~~ei~ 517 (634)
.+|+++++|++.+.++........+. ...+.++.. +.+ ..++++..+|++||++.+..... ...+++
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~- 80 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFW- 80 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEE-
Confidence 58999999999999987532222211 112322221 222 14778888999999999985432 234666
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCCCe
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
.++++|++| +|+|++++ ..+.+.+.+ .+++.+.+.+ .++++||+++||+
T Consensus 81 g~~~~~~~~-~G~g~~~~-------------------------~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~ 134 (156)
T TIGR03585 81 GIYANPFCK-PGVGSVLE-------------------------EAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFE 134 (156)
T ss_pred EEEeChhhh-cCchHHHH-------------------------HHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCe
Confidence 566999999 99999999 888888864 6999999877 5799999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
.++..
T Consensus 135 ~~g~~ 139 (156)
T TIGR03585 135 REGVF 139 (156)
T ss_pred Eeeee
Confidence 98753
|
Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar. |
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-09 Score=113.21 Aligned_cols=76 Identities=26% Similarity=0.507 Sum_probs=68.0
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.+++.++++++|||+.+.. .+|..++|+|+|||+|+|++|| +++++.++
T Consensus 7 ~~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll-------------------------~~l~~~a~ 55 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIV-------------------------SELINKAY 55 (297)
T ss_pred EEEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHH
Confidence 4677778899999998863 2589999999999999999999 99999999
Q ss_pred HcCCcEEEEec-HHhHHHHHhCCCeecc
Q 006709 569 SLGLDMLFLLT-TRTADWFKSRGFRECS 595 (634)
Q Consensus 569 ~~g~~~l~l~t-~~a~~~Y~k~GF~~~~ 595 (634)
+.|++.+++.+ +.+..||+++||+..+
T Consensus 56 ~~g~~~i~L~t~~~~~~fYek~GF~~~~ 83 (297)
T cd02169 56 EEGIFHLFLFTKPKNAKFFRGLGFKELA 83 (297)
T ss_pred HCCCCEEEEEEcccHHHHHHHCCCEEec
Confidence 99999999998 4578999999999888
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.8e-08 Score=97.37 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=90.2
Q ss_pred cccccCccchHHHHHHhHH--HHHHcc---cC-ccCCHHHHHhhcC-----------cEEEEEECCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQ--PLVESG---AL-VRRTDEELLKALD-----------SFYVVEREGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~--~~~~~~---~~-~~~~~~~~~~~l~-----------~~~V~~~~g~iiG~~~l~~~~~- 510 (634)
..+|+++++|++.+.+++. ...... +. ...+.++..+.+. .+++++.++++||++.+.....
T Consensus 11 l~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~~~ 90 (179)
T PRK10151 11 LELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIEPL 90 (179)
T ss_pred EEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeeccC
Confidence 3589999999999999973 211111 11 1123344333331 2577778999999999875432
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH-HcCCcEEEEec----HHhHHH
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA-SLGLDMLFLLT----TRTADW 585 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~-~~g~~~l~l~t----~~a~~~ 585 (634)
...++| .++++|+|||||+|++++ ..+.+++. ..++++|.+.+ .+++++
T Consensus 91 ~~~~~i-g~~i~~~~~g~G~~tea~-------------------------~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v 144 (179)
T PRK10151 91 NKTAYI-GYWLDESHQGQGIISQAL-------------------------QALIHHYAQSGELRRFVIKCRVDNPASNQV 144 (179)
T ss_pred CCceEE-EEEEChhhcCCcHHHHHH-------------------------HHHHHHHHhhCCccEEEEEEcCCCHHHHHH
Confidence 345788 678999999999999999 77778775 46899998877 579999
Q ss_pred HHhCCCeecccc
Q 006709 586 FKSRGFRECSIE 597 (634)
Q Consensus 586 Y~k~GF~~~~~~ 597 (634)
|+|+||+.+++.
T Consensus 145 ~ek~Gf~~~g~~ 156 (179)
T PRK10151 145 ALRNGFTLEGCL 156 (179)
T ss_pred HHHCCCEEEeEe
Confidence 999999998874
|
|
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.1e-08 Score=99.39 Aligned_cols=121 Identities=21% Similarity=0.227 Sum_probs=88.0
Q ss_pred ccccCccchHHHHHHhHHHHH-HcccC-ccC-CHHHH----Hhhc----CcEEEEEECCeEEEEEEEeeecC-CCeEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLV-ESGAL-VRR-TDEEL----LKAL----DSFYVVEREGQIIACAALFPFFK-EKCGEVA 517 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~-~~~~~-~~~-~~~~~----~~~l----~~~~V~~~~g~iiG~~~l~~~~~-~~~~ei~ 517 (634)
.+|+++++|++.+.++.+... ...+. .+. ...+. ...+ ...|++..+|++||++.+.+... ...+++
T Consensus 8 ~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~~~- 86 (186)
T PRK15130 8 KLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEF- 86 (186)
T ss_pred EEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeEEE-
Confidence 589999999999999865332 11111 111 11111 1111 24677788999999999875432 345677
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH-HcCCcEEEEec----HHhHHHHHhCCCe
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~-~~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
.++|+|+|||+|+|++++ ..+.+++. ..++.+|.+.+ .++.++|+++||+
T Consensus 87 ~~~v~~~~~g~G~g~~l~-------------------------~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~ 141 (186)
T PRK15130 87 QIIISPEYQGKGLATRAA-------------------------KLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFE 141 (186)
T ss_pred EEEECHHHcCCCHHHHHH-------------------------HHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCE
Confidence 699999999999999999 77778775 57999998877 4789999999999
Q ss_pred eccc
Q 006709 593 ECSI 596 (634)
Q Consensus 593 ~~~~ 596 (634)
..+.
T Consensus 142 ~~~~ 145 (186)
T PRK15130 142 VEGE 145 (186)
T ss_pred EEEE
Confidence 9765
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.5e-08 Score=105.43 Aligned_cols=122 Identities=18% Similarity=0.211 Sum_probs=87.4
Q ss_pred ccccCc-cchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc-------CcEEEEEE--CCeEEEEEEEeeecC-CCeEEEE
Q 006709 450 GTRTAK-VTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFK-EKCGEVA 517 (634)
Q Consensus 450 ~iR~a~-~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l-------~~~~V~~~--~g~iiG~~~l~~~~~-~~~~ei~ 517 (634)
.+|+++ ..|.+.+.++.......... ..++.+.+.... ..++++.. ++++||++.+..... ...++|.
T Consensus 151 ~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~~i~ 230 (292)
T TIGR03448 151 TVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPALGEVY 230 (292)
T ss_pred EeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCceeEEE
Confidence 577775 45888887775543332211 234555554321 24667766 689999976553221 2346787
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.++|+|+|||||+|++|+ ..+.+++++.|+..+.+.+ ..+.+||+|+||+.
T Consensus 231 ~~~V~p~~rg~GiG~~ll-------------------------~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~ 285 (292)
T TIGR03448 231 VVGVDPAAQGRGLGDALT-------------------------LIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTV 285 (292)
T ss_pred EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEE
Confidence 789999999999999999 8888999888999988877 46899999999998
Q ss_pred ccc
Q 006709 594 CSI 596 (634)
Q Consensus 594 ~~~ 596 (634)
...
T Consensus 286 ~~~ 288 (292)
T TIGR03448 286 AEV 288 (292)
T ss_pred ccc
Confidence 654
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.6e-08 Score=117.89 Aligned_cols=197 Identities=15% Similarity=0.116 Sum_probs=123.0
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHc-CCccc---c---------------cC
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSER-GHEAK---Y---------------LG 158 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~l-g~~~~---~---------------~~ 158 (634)
|+++|.|+||+.+.+.+ ++++++-|..-.+.+ +|+|.++...++..|..+ ..... . ..
T Consensus 10 M~~~V~KFGGtSv~~~e~i~~v~~iI~~~~~~~--~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~i~~~h~~~~~ 87 (810)
T PRK09466 10 MGRQLHKFGGSSLADAKCYRRVAGILAEYSQPD--DLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQTLRRYQQDLIE 87 (810)
T ss_pred ceeEEEEECccccCCHHHHHHHHHHHhhhccCC--EEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Confidence 45789999999999876 777776665433323 566666533333332211 10000 0 00
Q ss_pred Cc-------------------------cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccC
Q 006709 159 RY-------------------------RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVAS 213 (634)
Q Consensus 159 G~-------------------------RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~d 213 (634)
.+ ...++...+.+......+...|++. .|++.|++ +..+++.+
T Consensus 88 ~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~--------~L~~~G~~----a~~ld~~~ 155 (810)
T PRK09466 88 GLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAA--------LLNQQGLP----AAWLDARS 155 (810)
T ss_pred HhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHH--------HHHhCCCC----cEEEcHHH
Confidence 00 0011122233222222334555555 48889988 56665443
Q ss_pred CceeeeeecccccCccccccceE-EEecHHHHHHHHcCC--cEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCC
Q 006709 214 GNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERLDGG--CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEAD 286 (634)
Q Consensus 214 g~~l~ak~~g~~~g~d~g~~G~v-~~vd~~~I~~LLd~G--~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~Ad 286 (634)
+++... + +...+ .....+.++++++.+ .|||+.+. +.+..|++..+ -+|..|+.+|.+|+|+
T Consensus 156 --~i~~~~--------~-~~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~~G~~ttLGRGGSD~tA~~la~~l~A~ 224 (810)
T PRK09466 156 --FLRAER--------A-AQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNEAGETVLLGRNGSDYSATLIGALAGVE 224 (810)
T ss_pred --heecCC--------C-CCcccchhhhHHHHHHHHhccCCeEEEeeCccccCCCCCEEEcCCChHHHHHHHHHHHcCCC
Confidence 343321 1 11222 122346788877654 79999985 67788887765 4899999999999999
Q ss_pred EEEEeeccccc---C----CCCccccccCHHHHHHHHHhhc
Q 006709 287 KLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 287 kLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~ 320 (634)
.+.+.|||||+ | +++++|++|+.+|+.+|...|+
T Consensus 225 ~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Ga 265 (810)
T PRK09466 225 RVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAA 265 (810)
T ss_pred EEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcCc
Confidence 99999999997 4 5789999999999999987776
|
|
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.9e-08 Score=95.68 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=85.9
Q ss_pred ccccCccchHHHHHHhHHHHHH--cccCccC-----CHHH-------HHhhc----CcEEEEEE--CCeEEEEEEEeeec
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVE--SGALVRR-----TDEE-------LLKAL----DSFYVVER--EGQIIACAALFPFF 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~--~~~~~~~-----~~~~-------~~~~l----~~~~V~~~--~g~iiG~~~l~~~~ 509 (634)
.+|+++++|++.+.+++..... ..+.... ..++ +.... ...|++.. ++++||++.+....
T Consensus 19 ~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~~ 98 (194)
T PRK10809 19 VVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNVV 98 (194)
T ss_pred EEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEeec
Confidence 5999999999999998764111 1111100 0111 11111 12344433 67999999997553
Q ss_pred CC--CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHh
Q 006709 510 KE--KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRT 582 (634)
Q Consensus 510 ~~--~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a 582 (634)
.. ..+++ .+.|+|+|||||+|+.++ ..+.+++.+ +|+++|.+.+ .++
T Consensus 99 ~~~~~~~ei-g~~i~~~~~G~G~~~ea~-------------------------~~ll~~~~~~l~l~~i~~~v~~~N~~S 152 (194)
T PRK10809 99 RGSFHACYL-GYSLGQKWQGQGLMFEAL-------------------------QAAIRYMQRQQHMHRIMANYMPHNKRS 152 (194)
T ss_pred CCCeeeEEE-EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCceEEEEEeeCCCHHH
Confidence 21 34677 789999999999999999 888899865 6999999998 579
Q ss_pred HHHHHhCCCeeccc
Q 006709 583 ADWFKSRGFRECSI 596 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~ 596 (634)
+++|+|+||+.+++
T Consensus 153 ~~l~ek~Gf~~~g~ 166 (194)
T PRK10809 153 GDLLARLGFEKEGY 166 (194)
T ss_pred HHHHHHCCCcEEee
Confidence 99999999998775
|
|
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
Probab=98.81 E-value=3e-08 Score=106.30 Aligned_cols=80 Identities=26% Similarity=0.447 Sum_probs=70.7
Q ss_pred hcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHH
Q 006709 486 ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEK 565 (634)
Q Consensus 486 ~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 565 (634)
.++.+++++++|++|||+.+.. ..|.+++|+|+|||+|+|++|+ .++++
T Consensus 29 ~~d~~vv~~~~~~lVg~g~l~g------~~ik~vaV~~~~rG~Glg~~L~-------------------------~~L~~ 77 (332)
T TIGR00124 29 PLEIFIAVYEDEEIIGCGGIAG------NVIKCVAIDESLRGEGLALQLM-------------------------TELEN 77 (332)
T ss_pred CCCEEEEEEECCEEEEEEEEec------CEEEEEEEcHHHcCCCHHHHHH-------------------------HHHHH
Confidence 3567888889999999999862 2488999999999999999999 99999
Q ss_pred HHHHcCCcEEEEecH-HhHHHHHhCCCeeccc
Q 006709 566 KAASLGLDMLFLLTT-RTADWFKSRGFRECSI 596 (634)
Q Consensus 566 ~a~~~g~~~l~l~t~-~a~~~Y~k~GF~~~~~ 596 (634)
.+++.|+..+++.|. ....||+++||.+...
T Consensus 78 ~a~~~G~~~l~l~Tk~~~~~fy~klGF~~i~~ 109 (332)
T TIGR00124 78 LAYELGRFHLFIFTKPEYAALFEYCGFKTLAE 109 (332)
T ss_pred HHHHcCCCEEEEEECchHHHHHHHcCCEEeee
Confidence 999999999999993 4678999999999775
|
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. |
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.1e-07 Score=87.20 Aligned_cols=117 Identities=21% Similarity=0.315 Sum_probs=83.3
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC---cc-CCHHHHHhhcC-----------cEEEEEE-C-CeEEEEEEEeee-cCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VR-RTDEELLKALD-----------SFYVVER-E-GQIIACAALFPF-FKE 511 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~---~~-~~~~~~~~~l~-----------~~~V~~~-~-g~iiG~~~l~~~-~~~ 511 (634)
.+|+++++|++.+.++++.-....+. .. .+.++..+.+. .+|++.. + +++||++.+... ...
T Consensus 3 ~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~~ 82 (142)
T PF13302_consen 3 TLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKNN 82 (142)
T ss_dssp EEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETTT
T ss_pred EEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccCC
Confidence 58999999999999997421111111 11 24444333321 2344444 3 479999999533 346
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHH
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWF 586 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y 586 (634)
..+++ .+.|.|+|||+|+|+.++ ..+.+++ .+.|+..+.+.+ .++++++
T Consensus 83 ~~~ei-g~~i~~~~~g~G~~~~~~-------------------------~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~ 136 (142)
T PF13302_consen 83 NWAEI-GYWIGPDYRGKGYGTEAL-------------------------KLLLDWAFEELGLHRIIATVMADNEASRRLL 136 (142)
T ss_dssp TEEEE-EEEEEGGGTTSSHHHHHH-------------------------HHHHHHHHHTSTSSEEEEEEETT-HHHHHHH
T ss_pred Ccccc-ccchhHHHHhhhHHHHHH-------------------------HHHHHHHHhcCCcEEEEEEECcCCHHHHHHH
Confidence 77898 699999999999999999 8888888 689999999888 5799999
Q ss_pred HhCCCe
Q 006709 587 KSRGFR 592 (634)
Q Consensus 587 ~k~GF~ 592 (634)
+|.||+
T Consensus 137 ~k~GF~ 142 (142)
T PF13302_consen 137 EKLGFE 142 (142)
T ss_dssp HHTT-E
T ss_pred HHcCCC
Confidence 999996
|
... |
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=9.3e-08 Score=90.55 Aligned_cols=124 Identities=18% Similarity=0.181 Sum_probs=84.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEE-ECCeEEEEEEEeeec----CCCeEEEEEEEECCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFF----KEKCGEVAAIGVSPE 524 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~-~~g~iiG~~~l~~~~----~~~~~ei~~l~V~p~ 524 (634)
-||.|+++|+-.+...--....+.+...........+-...||++ .+|+||||+...-+. .+..+.|.+|+|.-.
T Consensus 3 ~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs 82 (193)
T KOG3235|consen 3 NIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRS 82 (193)
T ss_pred ccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehhh
Confidence 589999999988766411101111111101111111224578888 579999998876333 234589999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHH-hCCCeecccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFK-SRGFRECSIE 597 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~-k~GF~~~~~~ 597 (634)
||+.|+|++|+++++ .++.+.. +.+.+.|.+ ..|..+|+ .+||++|+++
T Consensus 83 ~RrlGla~kLm~qa~---------------------rAm~E~~---~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve 136 (193)
T KOG3235|consen 83 YRRLGLAQKLMNQAS---------------------RAMVEVY---EAKYVSLHVRKSNRAALHLYKNTLGFVVCEVE 136 (193)
T ss_pred HHHhhHHHHHHHHHH---------------------HHHHHhh---cceEEEEeeecccHHHHHhhhhccceEEeecc
Confidence 999999999997666 5555544 667777777 35888999 8999999876
|
|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=84.54 Aligned_cols=78 Identities=22% Similarity=0.359 Sum_probs=70.1
Q ss_pred EECCeEEEEEEEeeecCCC-eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC
Q 006709 494 EREGQIIACAALFPFFKEK-CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL 572 (634)
Q Consensus 494 ~~~g~iiG~~~l~~~~~~~-~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~ 572 (634)
|....++|-..+.+....+ ...+..+.|+.+.||+|+|+.|| +..+++++..|+
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lM-------------------------k~~E~~~R~~gf 117 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLM-------------------------KSTEKWMREKGF 117 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHH-------------------------HHHHHHHHHhhh
Confidence 4557899999999876554 47899999999999999999999 999999999999
Q ss_pred cEEEEecHHhHHHHHhCCCeeccc
Q 006709 573 DMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 573 ~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
+.++|.|..-.+||+++||+.|..
T Consensus 118 ~~~yLsT~DQ~~FYe~lGYe~c~P 141 (225)
T KOG3397|consen 118 NEAYLSTDDQCRFYESLGYEKCDP 141 (225)
T ss_pred hheeeecccchhhhhhhcccccCc
Confidence 999999987889999999999874
|
|
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.4e-06 Score=72.35 Aligned_cols=57 Identities=26% Similarity=0.459 Sum_probs=45.7
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++|..++|+|+|||+|+|+.|+ ..+.+.+.+.|..- ++.+ ..++.+|+|+
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv-------------------------~~l~~~~~~~g~~~-~l~v~~~N~~s~~ly~kl 75 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALV-------------------------AALARELLERGKTP-FLYVDADNEASIRLYEKL 75 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHH-------------------------HHHHHHHHHTTSEE-EEEEETT-HHHHHHHHHC
T ss_pred cEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhCCCcE-EEEEECCCHHHHHHHHHc
Confidence 7899999999999999999999 78878887777654 3333 4789999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+.+..
T Consensus 76 Gf~~~~~ 82 (86)
T PF08445_consen 76 GFREIEE 82 (86)
T ss_dssp T-EEEEE
T ss_pred CCEEEEE
Confidence 9998753
|
This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B. |
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.6e-06 Score=64.59 Aligned_cols=62 Identities=34% Similarity=0.483 Sum_probs=52.9
Q ss_pred EEEEECCeEEEEEEEeeecC-CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH
Q 006709 491 YVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS 569 (634)
Q Consensus 491 ~V~~~~g~iiG~~~l~~~~~-~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~ 569 (634)
+++..+++++|++.+.+... .+..++..++|+|+|||+|+|++++ ..+.+.+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~-------------------------~~~~~~~~~ 56 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALL-------------------------EAAEEEARE 56 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHH-------------------------HHHHHHHHH
Confidence 55667899999999986532 4678998899999999999999999 888888888
Q ss_pred cCCcEEEE
Q 006709 570 LGLDMLFL 577 (634)
Q Consensus 570 ~g~~~l~l 577 (634)
.+++.+.+
T Consensus 57 ~~~~~v~~ 64 (65)
T cd04301 57 RGAKRLRL 64 (65)
T ss_pred cCCcEEEe
Confidence 89888875
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera |
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.9e-06 Score=79.68 Aligned_cols=89 Identities=25% Similarity=0.346 Sum_probs=68.0
Q ss_pred hcCcEEEEEECCeEEEEEEEeeecCC-CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH
Q 006709 486 ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE 564 (634)
Q Consensus 486 ~l~~~~V~~~~g~iiG~~~l~~~~~~-~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 564 (634)
.-.++++...+|++++|+.+.|-... ....|..+.|+|++||+|+|.+|| ..+.
T Consensus 48 ~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm-------------------------~~AL 102 (155)
T COG2153 48 DTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLM-------------------------EKAL 102 (155)
T ss_pred ccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHH-------------------------HHHH
Confidence 33577777779999999999864322 225699999999999999999999 5555
Q ss_pred HHHHHc-CCcEEEEec-HHhHHHHHhCCCeecccccc
Q 006709 565 KKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 565 ~~a~~~-g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~ 599 (634)
+.+... +-+.+.+.. ...++||.++||..++.+..
T Consensus 103 ~~~~~~~p~~~v~l~AQahLq~fYa~~GFv~~~e~yl 139 (155)
T COG2153 103 ETAGREWPDKPVYLGAQAHLQDFYASFGFVRVGEEYL 139 (155)
T ss_pred HHHHhhCCCCCeEEehHHHHHHHHHHhCcEEcCchhh
Confidence 555443 355567776 56899999999999987543
|
|
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.2e-06 Score=86.33 Aligned_cols=122 Identities=17% Similarity=0.234 Sum_probs=81.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCC---------eEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK---------CGEVAAI 519 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~---------~~ei~~l 519 (634)
..+|..++.|+.++.+|-+.+....+... ..+++...-+..-+|..++..+|-.++....... ..+|..+
T Consensus 17 ~~l~~it~~nl~~~~~l~~~~fP~~y~~k-fy~~~~~~~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~L 95 (187)
T KOG3138|consen 17 IELRLITPNNLKQLKQLNEDIFPISYVDK-FYPDVLSNGDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSL 95 (187)
T ss_pred eeeccCCcchHHHHHHHhccccCcchHHH-HHHHHHhcCCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEee
Confidence 56899999999999999554433332211 1111111112222233334444444433211111 3779999
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcC-CcEEEEec----HHhHHHHHhCCCeec
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g-~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
.|.|.||.+|||++|| +++.+.+.... ++.+++.+ ..|..||+++||+..
T Consensus 96 gvl~~yR~~gIGs~Ll-------------------------~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~ 150 (187)
T KOG3138|consen 96 GVLPRYRNKGIGSKLL-------------------------EFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIV 150 (187)
T ss_pred cccHHHHhcchHHHHH-------------------------HHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEe
Confidence 9999999999999999 99999998888 88888887 369999999999986
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
..
T Consensus 151 ~~ 152 (187)
T KOG3138|consen 151 ER 152 (187)
T ss_pred ec
Confidence 64
|
|
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.8e-06 Score=80.86 Aligned_cols=115 Identities=18% Similarity=0.178 Sum_probs=83.0
Q ss_pred chHHHHHHhHHH----HH-Hcc--cCccCCHHHHHhhcCcEEEEEECC-eEEEEEEEeeecCC--CeEEEEEEEECCCCc
Q 006709 457 TDLSGIKQIIQP----LV-ESG--ALVRRTDEELLKALDSFYVVEREG-QIIACAALFPFFKE--KCGEVAAIGVSPECR 526 (634)
Q Consensus 457 ~D~~~i~~l~~~----~~-~~~--~~~~~~~~~~~~~l~~~~V~~~~g-~iiG~~~l~~~~~~--~~~ei~~l~V~p~~r 526 (634)
+|++-..+|+.. .. ... +..+.-..++...-..|+++..++ +++||+.+....+- .+.+...+-|.|.||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 677777777643 11 111 211112344444445778887766 89999998743332 356777889999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||+.|| +.++..+.+...+.|.|.+ .+|..||+++||.....
T Consensus 134 ~kGiGk~LL-------------------------~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~ 182 (202)
T KOG2488|consen 134 GKGIGKFLL-------------------------DTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEE 182 (202)
T ss_pred ccChHHHHH-------------------------HHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCCC
Confidence 999999999 9999999888888777776 68999999999988554
|
|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
Probab=98.18 E-value=7.4e-06 Score=92.80 Aligned_cols=85 Identities=19% Similarity=0.269 Sum_probs=66.0
Q ss_pred cEEEEE--ECCeEEEEEEEeeecC-------CCeEEEEEEE-----------ECCCCcCCCHHHHHHhhhcccccccccc
Q 006709 489 SFYVVE--REGQIIACAALFPFFK-------EKCGEVAAIG-----------VSPECRGQGQGDKLLGLCIWPLLSETRY 548 (634)
Q Consensus 489 ~~~V~~--~~g~iiG~~~l~~~~~-------~~~~ei~~l~-----------V~p~~rgqGiG~~Ll~~~i~~~~~~~~~ 548 (634)
.|.-.+ .++.++|++.+..... ..++.|..|. ++|+|||+|+|++||
T Consensus 413 ~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll------------- 479 (522)
T TIGR01211 413 FFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLL------------- 479 (522)
T ss_pred EEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHH-------------
Confidence 344444 2578999999974321 1245555555 359999999999999
Q ss_pred cccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccccc
Q 006709 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 549 ~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~ 598 (634)
+++++.|++.|++.+.+.+ ..|++||+++||+..+..|
T Consensus 480 ------------~~ae~~Ar~~G~~~i~v~s~~~A~~FY~klGf~~~g~ym 518 (522)
T TIGR01211 480 ------------EEAERIAAEEGSEKILVISGIGVREYYRKLGYELDGPYM 518 (522)
T ss_pred ------------HHHHHHHHHCCCCEEEEeeCchHHHHHHHCCCEEEccee
Confidence 9999999999999999866 5799999999999877654
|
The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. |
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.4e-06 Score=78.76 Aligned_cols=121 Identities=21% Similarity=0.169 Sum_probs=87.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEE-CCeEEEEEEEeee--cCCCeEEEEEEEECCCCc
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPF--FKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~-~g~iiG~~~l~~~--~~~~~~ei~~l~V~p~~r 526 (634)
++|+.+.+|+-..-.+--.-..+++..+....++...-+.|.+++. .++|-|++.-..- ..+-.+++.++.|.|+||
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~R 82 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYR 82 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHH
Confidence 5899999998877666332233445555566777777778888875 4788898876411 112347899999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
++|+|++|| +.+++-....+.--+.+.+ +-|+++|+++||...-
T Consensus 83 rl~la~~lm-------------------------~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR 130 (173)
T KOG3234|consen 83 RLGLAAKLM-------------------------DTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYR 130 (173)
T ss_pred HHHHHHHHH-------------------------HHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEE
Confidence 999999999 8888887665444444433 5699999999998743
|
|
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.8e-05 Score=75.78 Aligned_cols=112 Identities=21% Similarity=0.321 Sum_probs=66.6
Q ss_pred CHHHHHhhcC----cEEEEEECC--eEEEEEEEeeec------------------------------------CCCeEEE
Q 006709 479 TDEELLKALD----SFYVVEREG--QIIACAALFPFF------------------------------------KEKCGEV 516 (634)
Q Consensus 479 ~~~~~~~~l~----~~~V~~~~g--~iiG~~~l~~~~------------------------------------~~~~~ei 516 (634)
+++++...+| ..|+...++ +|+|++.+..-. .-....|
T Consensus 14 sPnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RI 93 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARI 93 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEE
T ss_pred CHHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeE
Confidence 4555554443 678888888 999999874110 0012578
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-------------------------HHcC
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-------------------------ASLG 571 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-------------------------~~~g 571 (634)
-.|+|||++|++|+|++|| +.+++++ +..+
T Consensus 94 vRIAvhP~~q~~G~Gs~lL-------------------------~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 148 (196)
T PF13718_consen 94 VRIAVHPDLQRMGYGSRLL-------------------------QQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPG 148 (196)
T ss_dssp EEEEE-CCC-SSSHHHHHH-------------------------HHHHHT-----------------------------S
T ss_pred EEEEEChhhhcCCHHHHHH-------------------------HHHHHHHhhhcccccccccccccccccccccccccC
Confidence 8999999999999999999 7777777 3557
Q ss_pred CcEEEEec---HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeec
Q 006709 572 LDMLFLLT---TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 572 ~~~l~l~t---~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
++.+-..- ....+||.|.||...-...-+++. -..-|.+++|.|
T Consensus 149 vDylGtSFG~t~~Ll~FW~k~gf~pv~l~~~~n~~-----SGe~S~imlr~l 195 (196)
T PF13718_consen 149 VDYLGTSFGATPELLKFWQKNGFVPVYLGQTRNEA-----SGEHSAIMLRPL 195 (196)
T ss_dssp -SEEEEEEE--HHHHHHHHCTT-EEEEE-SS--TT-----T---EEEEEEE-
T ss_pred CCEEEeccCCCHHHHHHHHHCCcEEEEEecCcccc-----cCceeeeEEeec
Confidence 77654332 568899999999997765444321 123455666765
|
|
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.6e-05 Score=81.72 Aligned_cols=78 Identities=24% Similarity=0.350 Sum_probs=61.5
Q ss_pred EEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC
Q 006709 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL 572 (634)
Q Consensus 493 ~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~ 572 (634)
.+.+|+||+.+... .....++.|..++++|+|||+|+++.|+ ..+-...-..|.
T Consensus 182 ~~~d~~iVa~A~t~-a~~~~~~~I~gV~T~peyR~kGyAt~lv-------------------------a~L~~~lL~eGk 235 (268)
T COG3393 182 LEGDGKIVAKAETA-AENPAYAQINGVYTHPEYRGKGYATALV-------------------------ATLAAKLLAEGK 235 (268)
T ss_pred EccCCcEEEeeecc-ccCCcceEEEEEEcCHHHccccHHHHHH-------------------------HHHHHHHHhCCC
Confidence 34456999999887 3456789999999999999999999999 666666555565
Q ss_pred c-EEEEec--HHhHHHHHhCCCeeccc
Q 006709 573 D-MLFLLT--TRTADWFKSRGFRECSI 596 (634)
Q Consensus 573 ~-~l~l~t--~~a~~~Y~k~GF~~~~~ 596 (634)
+ .++..+ +.|.+.|++.||+..+.
T Consensus 236 ~~~L~~~~~N~~A~~iY~riGF~~~g~ 262 (268)
T COG3393 236 IPCLFVNSDNPVARRIYQRIGFREIGE 262 (268)
T ss_pred eeEEEEecCCHHHHHHHHHhCCeecce
Confidence 4 455533 56899999999999773
|
|
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.4e-05 Score=79.91 Aligned_cols=111 Identities=23% Similarity=0.308 Sum_probs=88.5
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEEC-CeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~-g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
|..++...++|...+.++-+-+..++.. +...++.+.++..+ ++||+|..+.-. -|.+++|+|.+|
T Consensus 3 ~~~~~~v~~~e~~k~~~i~~fL~~~~l~-------~d~~ve~~v~~~~~~~~iiacGsiaGn------vikcvAvs~s~q 69 (352)
T COG3053 3 NYTFSRVKRSEKKKMAEIAEFLHQNDLR-------VDTTVEYFVAIYRDNEEIIACGSIAGN------VIKCVAVSESLQ 69 (352)
T ss_pred ceEEEEEccchhhHHHHHHHHHhhcCce-------ecccceEEEEEEcCCCcEEEecccccc------eeEEEEechhcc
Confidence 4456777778888888875555555442 33446667766665 999999988732 378999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
|-|+.-+|+ .++.+.+.++|...+|+.| +....||+.+||.+...
T Consensus 70 GeGl~lkl~-------------------------TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i~~ 115 (352)
T COG3053 70 GEGLALKLV-------------------------TELINLAYERGRTHLFIYTKPEYAALFKQCGFSEIAS 115 (352)
T ss_pred cccHHHHHH-------------------------HHHHHHHHHcCCceEEEEechhHHHHHHhCCceEeec
Confidence 999999999 9999999999999999999 56788999999998653
|
|
| >PRK09181 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00037 Score=78.49 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=64.4
Q ss_pred HHHHHHHHc----CCcEEEEcCCccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc--C------CCCcccc
Q 006709 241 VTRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL--D------ESGHLIR 305 (634)
Q Consensus 241 ~~~I~~LLd----~G~IPVv~~v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl--d------~~gklI~ 305 (634)
.+.++..++ .+.|||+.+...+..|++..+ -+|..|+.+|.+|+||.+.+-|||+.+ | +++++|+
T Consensus 182 ~~~i~~~l~~~~~~~~v~Vv~GF~~~~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~I~taDPriV~~~~A~~i~ 261 (475)
T PRK09181 182 DERIKKAFKDIDVTKELPIVTGYAKCKEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYHLSSADPKLVGEDKVVPIG 261 (475)
T ss_pred HHHHHHHHhhhccCCcEEEecCCcCCCCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCccccCCCCcCCCCCCeEcC
Confidence 355666555 478999999765667887765 589999999999999999999999733 3 4688999
Q ss_pred ccCHHHHHHHHHhhc
Q 006709 306 FLTLQEADSLIRQRV 320 (634)
Q Consensus 306 ~ls~~e~~~li~~~~ 320 (634)
+|+.+|+.+|..-|+
T Consensus 262 ~lsy~Ea~ELA~~GA 276 (475)
T PRK09181 262 RTNYDVADQLANLGM 276 (475)
T ss_pred ccCHHHHHHHHHcCc
Confidence 999999999865543
|
|
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00016 Score=68.57 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=62.7
Q ss_pred CeEEEEEEEeeecC---CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH-HcCC
Q 006709 497 GQIIACAALFPFFK---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA-SLGL 572 (634)
Q Consensus 497 g~iiG~~~l~~~~~---~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~-~~g~ 572 (634)
+++||++.+..... ...+++ ...++|+|+|||+|+..+ ..+.+++. ..++
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~i-g~~l~~~~~g~G~~tea~-------------------------~~~l~~~f~~~~l 130 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEI-GYWLDPEYWGKGYATEAL-------------------------RALLDYAFEELGL 130 (187)
T ss_pred CeEEEEEEEEEeccccccceEEE-EEEEChHHhcCchHHHHH-------------------------HHHHHHhhhhcCc
Confidence 58999999987652 556777 777899999999999999 66666653 5899
Q ss_pred cEEEEec----HHhHHHHHhCCCeeccccc
Q 006709 573 DMLFLLT----TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 573 ~~l~l~t----~~a~~~Y~k~GF~~~~~~~ 598 (634)
.+|.+.+ .++++.++|+||+..+...
T Consensus 131 ~ri~~~~~~~N~~S~rv~ek~Gf~~eg~~~ 160 (187)
T COG1670 131 HRIEATVDPENEASIRVYEKLGFRLEGELR 160 (187)
T ss_pred eEEEEEecCCCHHHHHHHHHcCChhhhhhh
Confidence 9999988 5799999999999987643
|
|
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=62.51 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=56.4
Q ss_pred EEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcC
Q 006709 492 VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLG 571 (634)
Q Consensus 492 V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g 571 (634)
.+..+|+.+|++.+.. .++...|....|.|++||||+|++|+ +.+.+++++.|
T Consensus 3 ~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~-------------------------~~~l~~a~~~~ 55 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLV-------------------------EAALDYARENG 55 (78)
T ss_dssp EEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHH-------------------------HHHHHHHHHTT
T ss_pred EEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHH-------------------------HHHHHHHHHCC
Confidence 3445688999999874 66788899999999999999999999 99999999988
Q ss_pred CcEEEEecHHhHHHHHhC
Q 006709 572 LDMLFLLTTRTADWFKSR 589 (634)
Q Consensus 572 ~~~l~l~t~~a~~~Y~k~ 589 (634)
.+ |...+.-+..|++++
T Consensus 56 ~k-v~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 56 LK-VVPTCSYVAKYFRRH 72 (78)
T ss_dssp -E-EEETSHHHHHHHHH-
T ss_pred CE-EEEECHHHHHHHHhC
Confidence 65 456777788888774
|
|
| >cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00047 Score=73.06 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=59.1
Q ss_pred CCcEEEEcCCccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc--C------CCCccccccCHHHHHHHHHh
Q 006709 250 GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL--D------ESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl--d------~~gklI~~ls~~e~~~li~~ 318 (634)
.+.|||+.+.+.+.+|++..+ -+|..|+.||.+|+|+.+.+-|||+.. | +++++|++++.+|+.+|..-
T Consensus 189 ~~~v~IvtGF~~~~~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~i~taDPriV~~~~A~~i~~lsY~EA~ELA~~ 268 (304)
T cd04248 189 RDELPIVTGYAKCAEGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFHLSSADPKLVGEDKARPIGRTNYDVADQLANL 268 (304)
T ss_pred CCcEEEeCCccCCCCCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCceecCCCCccCCCCceEeCccCHHHHHHHHHc
Confidence 578999999866667887765 589999999999999999999999733 3 36789999999999998654
Q ss_pred hc
Q 006709 319 RV 320 (634)
Q Consensus 319 ~~ 320 (634)
|+
T Consensus 269 Ga 270 (304)
T cd04248 269 GM 270 (304)
T ss_pred Ch
Confidence 43
|
Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon. |
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00049 Score=66.71 Aligned_cols=82 Identities=20% Similarity=0.353 Sum_probs=65.8
Q ss_pred cEEEEEECCeEEEEEEEeeecCC----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE 564 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 564 (634)
.||.+..|++++|++.+.....+ ..++| .-.|.|+.||+|+|+.+| ..+.
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emL-------------------------kl~L 123 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEML-------------------------KLAL 123 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHH-------------------------HHHH
Confidence 45555567999999999743222 24677 678999999999999999 9999
Q ss_pred HHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 565 KKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 565 ~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
++|+++|++.|.+.+ ..+++--+++|=...++
T Consensus 124 ~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGile~~ 159 (174)
T COG3981 124 EKARELGIKKVLVTCDKDNIASRKVIEANGGILENE 159 (174)
T ss_pred HHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEEeEE
Confidence 999999999999988 35777888888766554
|
|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00066 Score=79.35 Aligned_cols=132 Identities=20% Similarity=0.231 Sum_probs=86.9
Q ss_pred chHHHHHHhHHHHHHcccCccCCHHHHHhhcC----cEEEEEECC-eEEEEEEEeeecCC--------------------
Q 006709 457 TDLSGIKQIIQPLVESGALVRRTDEELLKALD----SFYVVEREG-QIIACAALFPFFKE-------------------- 511 (634)
Q Consensus 457 ~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~----~~~V~~~~g-~iiG~~~l~~~~~~-------------------- 511 (634)
.|-+.+.++|.-++..++- -++.++...++ +++++..++ ++++++.+.. .+.
T Consensus 437 ~~ee~Lr~~~gllV~AHYR--nsP~DL~~L~DaP~h~~~al~~~~~~~va~~qva~-EG~l~~~~i~~~~~g~r~~GnlI 513 (758)
T COG1444 437 FDEELLRQVYGLLVSAHYR--NSPNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAE-EGGLSDELIDIWLGGRRPRGNLI 513 (758)
T ss_pred hCHHHHHHHHhHHhhhhcc--CCHHHHHHHhcCCCCeeEEEEcCCCceEEEEEeec-cCCCcHHHHHHHhcCCCCCCccc
Confidence 3444445555545555442 35556655553 688888766 7777777631 100
Q ss_pred ----------------CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEE
Q 006709 512 ----------------KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDML 575 (634)
Q Consensus 512 ----------------~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l 575 (634)
....|-.|+|||++|++|||++|| +.+.++|+ .+++-+
T Consensus 514 p~~l~~~~~~~~fa~l~G~RIvRIAvhPe~q~~GiGsrlL-------------------------~~l~~~a~-~~~Dwl 567 (758)
T COG1444 514 PDLLAKHHRDPEFAKLVGWRIVRIAVHPELQRMGIGSRLL-------------------------ALLIEEAR-KGLDWL 567 (758)
T ss_pred HHHHHHhhcchhhcccceeeEEEEEeCHHHHhcCHHHHHH-------------------------HHHHHHHh-cCCCEE
Confidence 114678999999999999999999 88888885 567765
Q ss_pred EEec---HHhHHHHHhCCCeecccccchhHhhhhccCC--CCceEEEeecCCCC
Q 006709 576 FLLT---TRTADWFKSRGFRECSIEMIPEERRKRINLS--RNSKYYMKKLLPDT 624 (634)
Q Consensus 576 ~l~t---~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~--~~s~~~~k~l~~~~ 624 (634)
-..- ....+|+.++||.+..+..-- |.+ --|.+++|.|++..
T Consensus 568 gvsFG~t~~L~rFW~rnGF~pVhls~~r-------n~~SGeys~i~lkpLs~~~ 614 (758)
T COG1444 568 GVSFGYTEELLRFWLRNGFVPVHLSPTR-------NASSGEYTAIVLKPLSDAG 614 (758)
T ss_pred eeccCCCHHHHHHHHHcCeEEEEecCcc-------CcCCCceeEEEEecCCHHH
Confidence 4433 568899999999997654322 222 34666778887543
|
|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0024 Score=59.28 Aligned_cols=107 Identities=17% Similarity=0.239 Sum_probs=66.2
Q ss_pred cccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcC
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rg 527 (634)
+-.++++|.-.+..|+ ...+.+.+...+ ..+|++.-+++++|.+.+.. ....++|..|+|+|--|+
T Consensus 7 l~~ls~Qd~iDL~KIw---------p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VRevTRr 75 (128)
T PF12568_consen 7 LTTLSEQDRIDLAKIW---------PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVREVTRR 75 (128)
T ss_dssp -SS--HHHHHHHHHH----------TTS----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-TT-SS
T ss_pred cCCCCHHHHHHHHHhC---------CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEeecccc
Confidence 3456778888888885 122334444444 47999999999999999984 457899999999999999
Q ss_pred CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH--------HhHHHHHhCCCeecc
Q 006709 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT--------RTADWFKSRGFRECS 595 (634)
Q Consensus 528 qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~--------~a~~~Y~k~GF~~~~ 595 (634)
+|+|..|+ +.+...+ -.++...+... ....|...+||...+
T Consensus 76 RGVG~yLl-------------------------ee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~ 124 (128)
T PF12568_consen 76 RGVGLYLL-------------------------EEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQS 124 (128)
T ss_dssp SSHHHHHH-------------------------HHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-S
T ss_pred ccHHHHHH-------------------------HHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCccccC
Confidence 99999999 6666655 34555555442 245689999996643
|
It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A. |
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00099 Score=59.45 Aligned_cols=66 Identities=29% Similarity=0.384 Sum_probs=56.8
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH
Q 006709 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a 567 (634)
..+|+...+|+.+|.+..++ .++....|.+-+|+|++||||+|++|+ ..+.+.|
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~-~~~~~i~i~HT~V~d~lrGqGia~~L~-------------------------~~al~~a 68 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYD-RGENLIIIDHTYVPDELRGQGIAQKLV-------------------------EKALEEA 68 (99)
T ss_pred ceEEEEecCCcEEEEEEEec-CCCCEEEEecCcCCHHHcCCcHHHHHH-------------------------HHHHHHH
Confidence 57899999999999998884 355778899999999999999999999 8999999
Q ss_pred HHcCCcEEEEec
Q 006709 568 ASLGLDMLFLLT 579 (634)
Q Consensus 568 ~~~g~~~l~l~t 579 (634)
++.|.+-+-+..
T Consensus 69 r~~g~kiiP~Cs 80 (99)
T COG2388 69 REAGLKIIPLCS 80 (99)
T ss_pred HHcCCeEcccch
Confidence 999987655444
|
|
| >PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2 | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0009 Score=65.47 Aligned_cols=127 Identities=20% Similarity=0.290 Sum_probs=79.1
Q ss_pred HHHHHHhhcCCcccccccc-ccccccCccc-hHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEe
Q 006709 429 LLLELFKRDGMGTMVASDL-YEGTRTAKVT-DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 506 (634)
Q Consensus 429 ll~el~~~~g~GT~I~~D~-Ye~iR~a~~~-D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~ 506 (634)
|..||||..|.||+|.+-. .........- |.+.|.+++.........+....+.+...+...|+ +|..-|.+.+.
T Consensus 2 L~kELFt~sgagTlirrG~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt 78 (170)
T PF04768_consen 2 LQKELFTDSGAGTLIRRGYKILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVT 78 (170)
T ss_dssp HHHHHHSSSTSSEEEE----EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEE
T ss_pred ccchhcCCCCCceEEecCeeeEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEE
Confidence 6789999999999997643 2344555555 99999999765442222233233333333333333 34455566664
Q ss_pred e---ecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec---H
Q 006709 507 P---FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---T 580 (634)
Q Consensus 507 ~---~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~ 580 (634)
+ ......++|..++|.|..||.|++..+. ..|.+.. ..|++.+ .
T Consensus 79 ~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf-------------------------~~i~~d~-----p~L~Wrsr~~n 128 (170)
T PF04768_consen 79 PEGPDSNGPVPYLDKFAVSKSAQGSGVADNVF-------------------------NAIRKDF-----PKLFWRSREDN 128 (170)
T ss_dssp EE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHH-------------------------HHHHHH------SSEEEEEETT-
T ss_pred ecCCCCCCCCeEEEEEEecchhhhcCHHHHHH-------------------------HHHHHhc-----cceEEEecCCC
Confidence 3 2334579999999999999999999999 7776655 3466666 4
Q ss_pred HhHHHHHh
Q 006709 581 RTADWFKS 588 (634)
Q Consensus 581 ~a~~~Y~k 588 (634)
+...||-+
T Consensus 129 ~~~~Wyf~ 136 (170)
T PF04768_consen 129 PNNKWYFE 136 (170)
T ss_dssp TTHHHHHH
T ss_pred CcccEEEE
Confidence 56788753
|
7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A. |
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00021 Score=67.87 Aligned_cols=122 Identities=16% Similarity=0.120 Sum_probs=77.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCcc-C-CHHHHHhhcC------cEEEE-------EECCeEEEEEEEeeecCC--
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR-R-TDEELLKALD------SFYVV-------EREGQIIACAALFPFFKE-- 511 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~-~-~~~~~~~~l~------~~~V~-------~~~g~iiG~~~l~~~~~~-- 511 (634)
..||+.-++|.+++..| ...++..+ + +.+-+.+.+- .-+.. ..++.+||.+.-.....+
T Consensus 12 ~~irp~i~e~~q~~~~L----ea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~l 87 (190)
T KOG4144|consen 12 PRIRPGIPESCQRRHTL----EASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERL 87 (190)
T ss_pred ccCCCCChHHHHHHhcc----ccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhh
Confidence 45899999998888877 33344311 1 1122222221 11111 126788888765433222
Q ss_pred ------------CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec
Q 006709 512 ------------KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT 579 (634)
Q Consensus 512 ------------~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t 579 (634)
....|.+++|+|+||.||.|..|| .+|++..+.+--..++.|.+
T Consensus 88 t~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll------------------------~~ylq~l~~q~i~~r~~Li~ 143 (190)
T KOG4144|consen 88 TQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILL------------------------WRYLQHLGSQPIVRRAALIC 143 (190)
T ss_pred hHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHH------------------------HHHHHHhhcCccccceeeee
Confidence 226789999999999999999999 26677776544444555555
Q ss_pred -HHhHHHHHhCCCeeccccc
Q 006709 580 -TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 580 -~~a~~~Y~k~GF~~~~~~~ 598 (634)
.....||++.||+..+...
T Consensus 144 h~pLvPFYEr~gFk~vgp~~ 163 (190)
T KOG4144|consen 144 HDPLVPFYERFGFKAVGPCA 163 (190)
T ss_pred cCCccchhHhcCceeecccc
Confidence 6788999999999877633
|
|
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.001 Score=54.68 Aligned_cols=44 Identities=32% Similarity=0.524 Sum_probs=39.2
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCC
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 591 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF 591 (634)
++|+|+|||+|+|++|+ +.+.+.++..|+. ....+..+|.+.||
T Consensus 87 l~v~~~~rg~Gig~~Ll-------------------------~~~~~~~~~~g~~----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALL-------------------------EAALEWARKRGIS----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHH-------------------------HHHHHHHHHcCce----ehHHHHHHHHhcCC
Confidence 89999999999999999 8899999888876 44567889999999
|
|
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0086 Score=62.60 Aligned_cols=90 Identities=20% Similarity=0.239 Sum_probs=61.9
Q ss_pred CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcc
Q 006709 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF 558 (634)
Q Consensus 479 ~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~ 558 (634)
+.+++.+. ..-|++..+|+||+-|.-. +..+...|| .|.++|+|||||+++.+-
T Consensus 157 s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~-~~~~~~~EI-~I~T~~~yR~kGLA~~~a----------------------- 210 (265)
T PF12746_consen 157 SYEDFLKN-GFGFCILHDGEIVSGCSSY-FVYENGIEI-DIETHPEYRGKGLATAVA----------------------- 210 (265)
T ss_dssp SHHHHHHH---EEEEEETTEEEEEEEEE-EEETTEEEE-EEEE-CCCTTSSHHHHHH-----------------------
T ss_pred CHHHHHhc-CcEEEEEECCEEEEEEEEE-EEECCEEEE-EEEECHHhhcCCHHHHHH-----------------------
Confidence 45555444 3456677788887644333 234566888 899999999999999999
Q ss_pred hHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 559 LRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 559 ~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
..+...|.+.|+.-.+-.. ..+.++=+|+||+....
T Consensus 211 --a~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 211 --AAFILECLENGLYPSWDCHNLASIALAEKLGFHFDFE 247 (265)
T ss_dssp --HHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EEEE
T ss_pred --HHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCcccce
Confidence 8888889898987755433 56889999999987554
|
|
| >PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=63.78 Aligned_cols=146 Identities=20% Similarity=0.347 Sum_probs=71.8
Q ss_pred ccccCccchHHHHHHhHHHHHHccc-CccCCHHHHHhhc----------------C--cEEEEEE--CCeEEEEEEEe--
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----------------D--SFYVVER--EGQIIACAALF-- 506 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l----------------~--~~~V~~~--~g~iiG~~~l~-- 506 (634)
.|||++.+|+++|.+|-+..- .++ ..+.+.+.+.+.+ + .++|.|+ .|+|+|++.+.
T Consensus 3 viRp~~~~Dl~aL~~LA~~sg-~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~ 81 (342)
T PF04958_consen 3 VIRPARPSDLDALYALARESG-PGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAA 81 (342)
T ss_dssp EEEE--GGGHHHHHHHHHHS--TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEESS
T ss_pred EEecCchhhHHHHHHHHHHcC-CCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEec
Confidence 589999999999999954211 111 2344555554444 1 4677785 59999999873
Q ss_pred -----eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccccc
Q 006709 507 -----PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (634)
Q Consensus 507 -----~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~ 553 (634)
||+ -..+.||..|+++|+||+-|.|+.|- .+-
T Consensus 82 vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLS-r~R-------------- 146 (342)
T PF04958_consen 82 VGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLS-RSR-------------- 146 (342)
T ss_dssp TTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHH-HHH--------------
T ss_pred cCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHH-HHH--------------
Confidence 111 12347999999999999999998776 111
Q ss_pred CCCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhCCCeecccccchhHhhhhccCCC-CceEEEeecCCC
Q 006709 554 NGFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSR-NSKYYMKKLLPD 623 (634)
Q Consensus 554 ~~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~-~s~~~~k~l~~~ 623 (634)
=-......+.=-++|..+. ...-.||+..|=+-.+...-..+. ++. .+|-++..|-|.
T Consensus 147 -------fLFiA~~~~rF~~~viAElrG~~De~G~SPFWdalG~~FF~mdF~eAD~-----Lsg~~~k~FIaeLMP~ 211 (342)
T PF04958_consen 147 -------FLFIAQHRERFADRVIAELRGVSDEDGRSPFWDALGRHFFDMDFQEADY-----LSGIGNKQFIAELMPR 211 (342)
T ss_dssp -------HHHHHH-GGGS-SEEEEE--B---TT---HHHHHTGGGTS---HHHHHH-----HHHH------------
T ss_pred -------HHHHHhChhhcchheeeeccCCcCCCCCCchHHHhhccccCCCHHHHHH-----HHcCCcchHHHHhCCC
Confidence 1222233444557788777 235668888886665543222221 222 455666666554
|
This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A. |
| >COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0014 Score=60.71 Aligned_cols=124 Identities=20% Similarity=0.237 Sum_probs=87.4
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCc-cCCHHHHHhhcCcEEEEEECCeEEEEEEEeee-----------c---CCCeE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALV-RRTDEELLKALDSFYVVEREGQIIACAALFPF-----------F---KEKCG 514 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~-----------~---~~~~~ 514 (634)
.+|.....|...+..+-+. ..... ....+.+...+...|+++++|.+.|+..-+.. + -+...
T Consensus 9 ~~~D~~apd~aavLaLNNe---ha~elswLe~erL~~l~~eAF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~ 85 (167)
T COG3818 9 LIRDVRAPDLAAVLALNNE---HALELSWLELERLYRLYKEAFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENFF 85 (167)
T ss_pred ehhhhcCCchhhHHhccch---hhhhccccCHHHHHHHHHHHHHHhhccchhhheeeccccccCCCCceeehhhhCCceE
Confidence 3555566688777777431 11111 22455555555555688888887777654311 1 12347
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH------HhHHHHHh
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT------RTADWFKS 588 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~------~a~~~Y~k 588 (634)
+|..+.|....||.|+|+.|. +.+.+.|+..|...+..++. .+..|.-.
T Consensus 86 YvDRvVVA~~aRGrG~aRalY-------------------------~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaa 140 (167)
T COG3818 86 YVDRVVVASRARGRGVARALY-------------------------ADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAA 140 (167)
T ss_pred EEEEEEEEecccccchHHHHH-------------------------HHHHHHHHhcCCceEEEEecCCCCChHHHHHhhh
Confidence 899999999999999999999 99999999999999888872 35557789
Q ss_pred CCCeecccccchh
Q 006709 589 RGFRECSIEMIPE 601 (634)
Q Consensus 589 ~GF~~~~~~~~~~ 601 (634)
+||.+.+...+..
T Consensus 141 lGF~eVG~a~ihg 153 (167)
T COG3818 141 LGFHEVGQATIHG 153 (167)
T ss_pred cCceEccceEEec
Confidence 9999999866653
|
|
| >KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.017 Score=62.51 Aligned_cols=70 Identities=20% Similarity=0.234 Sum_probs=54.5
Q ss_pred CCcEEEEcCC-c-cCCCCcee---eechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 250 GGCLVILSNL-G-YSSSGEVL---NCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 250 ~G~IPVv~~v-~-~~~~Gei~---nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
.+.|||+.+. + .-.+|-+. -+-+|..|+.+|.+|++|.+-+-.||||+ | |.+++++.++.+|+.+|.-
T Consensus 258 en~VPVvTGf~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaY 337 (559)
T KOG0456|consen 258 ENAVPVVTGFLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAY 337 (559)
T ss_pred CCccceEeeccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHh
Confidence 4679999863 4 22333322 34689999999999999999999999997 3 5799999999999988754
Q ss_pred hh
Q 006709 318 QR 319 (634)
Q Consensus 318 ~~ 319 (634)
-|
T Consensus 338 fG 339 (559)
T KOG0456|consen 338 FG 339 (559)
T ss_pred hh
Confidence 33
|
|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0045 Score=66.14 Aligned_cols=83 Identities=18% Similarity=0.260 Sum_probs=68.8
Q ss_pred CcEEEEEECCeEEEEEEEeeec---CC---CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHH
Q 006709 488 DSFYVVEREGQIIACAALFPFF---KE---KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRD 561 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~---~~---~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~ 561 (634)
..++|...+.++++.....||. +. +.+.|..+++.|+|||+|.-++|| .
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll-------------------------~ 93 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALL-------------------------A 93 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHH-------------------------H
Confidence 4789999999999988887642 22 347889999999999999999999 8
Q ss_pred HHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 562 YIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 562 ~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
+..+..++.|+.-.+|.. -...||+|.||...+.
T Consensus 94 ~sLre~~~kG~p~s~L~P-~s~~iYrKfGye~asn 127 (389)
T COG4552 94 HSLREIARKGYPVSALHP-FSGGIYRKFGYEYASN 127 (389)
T ss_pred HHHHHHHHcCCeeEEecc-CchhhHhhccccccce
Confidence 888888899988766654 5688999999998764
|
|
| >TIGR03244 arg_catab_AstA arginine N-succinyltransferase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.01 Score=63.72 Aligned_cols=82 Identities=23% Similarity=0.462 Sum_probs=57.8
Q ss_pred cccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEe---
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALF--- 506 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~l----------------~~~~V~~~--~g~iiG~~~l~--- 506 (634)
|||++.+|+++|.+|-. ..+ ...+.+.+.+.+.+ ..+||.|+ .|+|+|++.+.
T Consensus 2 vRPv~~~Dl~aL~~LA~---~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~v 78 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQ---STGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAV 78 (336)
T ss_pred cccCccccHHHHHHHHH---HcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecc
Confidence 79999999999999843 333 22455555555554 15677775 59999999873
Q ss_pred ----eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 507 ----PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 507 ----~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
||+ -..+.||..|+++|+||+-|.|+.|=
T Consensus 79 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLS 139 (336)
T TIGR03244 79 GLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLS 139 (336)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHH
Confidence 211 01236899999999999999887654
|
In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST). |
| >TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.012 Score=63.07 Aligned_cols=82 Identities=20% Similarity=0.408 Sum_probs=56.9
Q ss_pred cccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhhc-----------------CcEEEEEE--CCeEEEEEEEe--
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALF-- 506 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~l-----------------~~~~V~~~--~g~iiG~~~l~-- 506 (634)
|||++.+|+++|.+|-. ..+ ...+.+.+.+.+.+ ..+||.|+ .|+|+|++.+.
T Consensus 2 iRpv~~~Dl~aL~~LA~---~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~ 78 (336)
T TIGR03245 2 VRPSRFADLPAIERLAN---ESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVAS 78 (336)
T ss_pred cccCccccHHHHHHHHH---HcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEec
Confidence 79999999999999843 333 12444555554444 15677775 59999999873
Q ss_pred -----eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 507 -----PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 507 -----~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
||+ -..+.||..|+++|+||+-|.|+.|=
T Consensus 79 vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLS 140 (336)
T TIGR03245 79 AGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLS 140 (336)
T ss_pred ccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHH
Confidence 211 01236899999999999999887654
|
In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit. |
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.086 Score=47.88 Aligned_cols=64 Identities=23% Similarity=0.126 Sum_probs=53.6
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++++..+|++||++.... .....+.....++|+|+..+.|..|+ ..+.++|.
T Consensus 72 ~l~~~~~~g~~va~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~l~-------------------------~~~i~~a~ 124 (142)
T PF13480_consen 72 RLFVLYDGGEPVAFALGFR--HGGTLYYWYGGYDPEYRKYSPGRLLL-------------------------WEAIRWAI 124 (142)
T ss_pred EEEEEEECCEEEEEEEEEE--ECCEEEEEEEEECHhhHhCCHHHHHH-------------------------HHHHHHHH
Confidence 5677888999999987763 34566777888999999999999999 88889999
Q ss_pred HcCCcEEEEec
Q 006709 569 SLGLDMLFLLT 579 (634)
Q Consensus 569 ~~g~~~l~l~t 579 (634)
+.|++.+-+..
T Consensus 125 ~~g~~~~d~g~ 135 (142)
T PF13480_consen 125 ERGLRYFDFGG 135 (142)
T ss_pred HCCCCEEEECC
Confidence 99998887665
|
|
| >PRK10456 arginine succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.012 Score=63.31 Aligned_cols=83 Identities=20% Similarity=0.414 Sum_probs=58.7
Q ss_pred ccccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEe--
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALF-- 506 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~l----------------~~~~V~~~--~g~iiG~~~l~-- 506 (634)
.|||++.+|+++|.+|-+ ..+ ...+.+.+.+.+.+ ..+||.|+ .|+|+|++.+.
T Consensus 3 vvRpv~~~Dl~aL~~LA~---~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~ 79 (344)
T PRK10456 3 VIRPVERSDLAALMQLAG---KTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVA 79 (344)
T ss_pred EEecCccccHHHHHHHHH---HcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEec
Confidence 589999999999999943 333 22455556555554 15677775 59999999873
Q ss_pred -----eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 507 -----PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 507 -----~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
||+ -..+.||..|+++|+||+-|.|+.|=
T Consensus 80 vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLS 141 (344)
T PRK10456 80 VGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLS 141 (344)
T ss_pred ccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHH
Confidence 211 01236899999999999999887654
|
|
| >TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=62.39 Aligned_cols=82 Identities=24% Similarity=0.464 Sum_probs=56.3
Q ss_pred cccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEe---
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALF--- 506 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~l----------------~~~~V~~~--~g~iiG~~~l~--- 506 (634)
|||++.+|+++|.+|-+ ..+ ...+.+.+.+.+.+ ..+||.|+ .|+|+|++.+.
T Consensus 2 vRpv~~~Dl~aL~~LA~---~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 78 (335)
T TIGR03243 2 VRPVRTSDLDALMQLAR---ESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAV 78 (335)
T ss_pred cccCccccHHHHHHHHH---HcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecc
Confidence 79999999999999843 233 12344444444443 14667775 59999999873
Q ss_pred ----eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 507 ----PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 507 ----~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
||+ -..+.||..|+++|+||+-|.|+.|=
T Consensus 79 G~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLS 139 (335)
T TIGR03243 79 GLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLS 139 (335)
T ss_pred cCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHH
Confidence 211 01236899999999999999887654
|
In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). |
| >TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.078 Score=54.72 Aligned_cols=83 Identities=18% Similarity=0.251 Sum_probs=61.7
Q ss_pred cEEEEEE-CCeEEEEEEEeeec-----------------------------CCCeEEEEEEEECCCCcCC--------C-
Q 006709 489 SFYVVER-EGQIIACAALFPFF-----------------------------KEKCGEVAAIGVSPECRGQ--------G- 529 (634)
Q Consensus 489 ~~~V~~~-~g~iiG~~~l~~~~-----------------------------~~~~~ei~~l~V~p~~rgq--------G- 529 (634)
++++... +|++|||+.+.|.. .....|+..++|+|+||++ |
T Consensus 57 h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~ 136 (241)
T TIGR03694 57 HSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGV 136 (241)
T ss_pred EEEEEECCCCCEEEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccc
Confidence 4444433 58999999987520 0234799999999999974 2
Q ss_pred -------------------HHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhC
Q 006709 530 -------------------QGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSR 589 (634)
Q Consensus 530 -------------------iG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~ 589 (634)
+...|+ ..+.+.|.+.|++.++..+ ....+++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~L~-------------------------~~~~~~a~~~Gi~~~~~v~~~~l~r~l~r~ 191 (241)
T TIGR03694 137 GVIETEAPFSESERRRFPHIPLGLY-------------------------LGLIALSSANGITHWYAIMEPRLARLLSRF 191 (241)
T ss_pred cccccccccchhhcccCchHHHHHH-------------------------HHHHHHHHHCCCcEEEEEeCHHHHHHHHHh
Confidence 234455 8889999999999999888 4567789999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
|+.....
T Consensus 192 G~~~~~l 198 (241)
T TIGR03694 192 GIQFRQV 198 (241)
T ss_pred CCceEEc
Confidence 9877544
|
Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production. |
| >COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.027 Score=60.63 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=51.2
Q ss_pred chHHHHHHhHHHHHHcccCccCCHHHHHhhcC----cEEEEEECCeEEEEEEEeee--cCCCeEEEEEEEECCCCcC-CC
Q 006709 457 TDLSGIKQIIQPLVESGALVRRTDEELLKALD----SFYVVEREGQIIACAALFPF--FKEKCGEVAAIGVSPECRG-QG 529 (634)
Q Consensus 457 ~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~----~~~V~~~~g~iiG~~~l~~~--~~~~~~ei~~l~V~p~~rg-qG 529 (634)
=|++.++.|++..+..+.. ..++++.+. ..+|. |.--|.+.+... ..++..++..++|.++.|| -|
T Consensus 345 Ldl~r~q~LI~~SFkRTLd----~h~y~~r~~~~La~~iVs---gdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~g 417 (495)
T COG5630 345 LDLPRLQHLIQSSFKRTLD----PHYYETRINTPLARAIVS---GDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEG 417 (495)
T ss_pred cCcHHHHHHHHHHHhhccC----HHHHHHhccCcceeEEee---ccceeeEEEEeeccCCCCCcceeeeeccccccccch
Confidence 3888999998877766554 345555543 44444 445566666532 2346789999999999999 99
Q ss_pred HHHHHH
Q 006709 530 QGDKLL 535 (634)
Q Consensus 530 iG~~Ll 535 (634)
|++.++
T Consensus 418 isd~vf 423 (495)
T COG5630 418 ISDAVF 423 (495)
T ss_pred HHHHHH
Confidence 999999
|
|
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.031 Score=48.99 Aligned_cols=72 Identities=22% Similarity=0.270 Sum_probs=58.1
Q ss_pred EEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC
Q 006709 493 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL 572 (634)
Q Consensus 493 ~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~ 572 (634)
...+|++|-..... ..+|+..-+.-|+|||||+.+.++ ....+.+.++|+
T Consensus 4 lgpeG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~-------------------------~~~~~~L~~~g~ 53 (89)
T PF08444_consen 4 LGPEGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVM-------------------------YHLAQYLHKLGF 53 (89)
T ss_pred cCCCCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHH-------------------------HHHHHHHHHCCC
Confidence 34578888776655 568898999999999999999999 888888888898
Q ss_pred cEEEEec----HHhHHHHHhCCCeecc
Q 006709 573 DMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 573 ~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
.. +..+ ...++..+++||....
T Consensus 54 P~-Y~hv~~~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 54 PF-YGHVDEDNEASQRLSKSLGFIFMP 79 (89)
T ss_pred Ce-EeehHhccHHHHHHHHHCCCeecC
Confidence 74 5555 4588899999998743
|
3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ]. |
| >PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.21 Score=49.39 Aligned_cols=83 Identities=19% Similarity=0.281 Sum_probs=62.7
Q ss_pred cEEEEEECCeEEEEEEEeeecC--------------------CCeEEEEEEEECCCCcC------CCHHHHHHhhhcccc
Q 006709 489 SFYVVEREGQIIACAALFPFFK--------------------EKCGEVAAIGVSPECRG------QGQGDKLLGLCIWPL 542 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~--------------------~~~~ei~~l~V~p~~rg------qGiG~~Ll~~~i~~~ 542 (634)
.++++..+|+++||+.+.|... ....|+..++|+|+.++ .-+...|+
T Consensus 46 ~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~------- 118 (182)
T PF00765_consen 46 VYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELL------- 118 (182)
T ss_dssp EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHH-------
T ss_pred eEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHH-------
Confidence 4566678899999999976421 24489999999999542 23566778
Q ss_pred cccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 543 LSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
..+.++|.+.|++.+...+ ....++|++.||...-.
T Consensus 119 ------------------~~~~e~a~~~gi~~~v~V~~~~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 119 ------------------LGMVEFALSNGIRHIVGVVDPAMERILRRAGWPVRRL 155 (182)
T ss_dssp ------------------HHHHHHHHCTT-SEEEEEEEHHHHHHHHHCT-EEEES
T ss_pred ------------------HHHHHHHHHCCCCEEEEEEChHHHHHHHHcCCceEEC
Confidence 8999999999999998888 56788999999987654
|
Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A. |
| >PRK13834 putative autoinducer synthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.34 Score=48.90 Aligned_cols=83 Identities=17% Similarity=0.247 Sum_probs=61.3
Q ss_pred cEEEEE-ECCeEEEEEEEeeec--------------------CCCeEEEEEEEECCCCc---CCC----HHHHHHhhhcc
Q 006709 489 SFYVVE-REGQIIACAALFPFF--------------------KEKCGEVAAIGVSPECR---GQG----QGDKLLGLCIW 540 (634)
Q Consensus 489 ~~~V~~-~~g~iiG~~~l~~~~--------------------~~~~~ei~~l~V~p~~r---gqG----iG~~Ll~~~i~ 540 (634)
++++.. .+|+++||+.+.|.. .+...|+..++|+|+++ +.+ +...|+
T Consensus 54 ~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~----- 128 (207)
T PRK13834 54 TYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMF----- 128 (207)
T ss_pred EEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHH-----
Confidence 455544 468999999885431 12358999999999864 222 445667
Q ss_pred cccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH-HhHHHHHhCCCeeccc
Q 006709 541 PLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSI 596 (634)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~-~a~~~Y~k~GF~~~~~ 596 (634)
..+.+++...|++.+...++ ...+.|++.||.....
T Consensus 129 --------------------~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~~l 165 (207)
T PRK13834 129 --------------------AGIIEWSMANGYTEIVTATDLRFERILARAGWPMQRL 165 (207)
T ss_pred --------------------HHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeEEC
Confidence 89999999999999998884 4667899999977543
|
|
| >KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.41 Score=45.75 Aligned_cols=74 Identities=24% Similarity=0.274 Sum_probs=54.5
Q ss_pred eEEEEEEEeeecCCC---------eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 498 QIIACAALFPFFKEK---------CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 498 ~iiG~~~l~~~~~~~---------~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
..||-+.++....+. .+|+.-+.--|.+||+|+|++.+ ..+..++.
T Consensus 83 ~MvGDvNlFlt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav-------------------------~~ml~y~~ 137 (185)
T KOG4135|consen 83 HMVGDVNLFLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAV-------------------------RAMLAYAY 137 (185)
T ss_pred hhccceeeEEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHH-------------------------HHHHHHHH
Confidence 467877776433222 37776666679999999999999 77777774
Q ss_pred H-cCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 569 S-LGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 569 ~-~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
+ +++.+-++.. .+..++|+|++|.....
T Consensus 138 s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 138 SVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred HHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 3 5777766655 46899999999988654
|
|
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.31 Score=48.25 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=49.1
Q ss_pred CCeEEEEEEEeeecC------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH-HHHH
Q 006709 496 EGQIIACAALFPFFK------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE-KKAA 568 (634)
Q Consensus 496 ~g~iiG~~~l~~~~~------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~a~ 568 (634)
..++|+.+.+..+.. .....+.-.+++|+|||+|+++ |+ ..+. +...
T Consensus 55 T~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~k-l~-------------------------~~~~~~~~~ 108 (181)
T PF06852_consen 55 TDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMK-LQ-------------------------DDICMDELD 108 (181)
T ss_pred CCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHH-HH-------------------------HHHHHHHhc
Confidence 467999888865432 3467888899999999999995 55 3333 3343
Q ss_pred HcCCcEEEEecHHhHHHHHh-CCCeeccc
Q 006709 569 SLGLDMLFLLTTRTADWFKS-RGFRECSI 596 (634)
Q Consensus 569 ~~g~~~l~l~t~~a~~~Y~k-~GF~~~~~ 596 (634)
..+-..+...+..+.+||.+ .||..++.
T Consensus 109 ~~~~N~~~~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 109 SVDDNSVAQGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred cCCCceeeecCHHHHHHHHHHhCCCCCcc
Confidence 33333333333567777765 79887664
|
Note that some proteins in the entry contain more than one copy of this region. |
| >COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.1 Score=57.86 Aligned_cols=52 Identities=19% Similarity=0.372 Sum_probs=46.2
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~ 598 (634)
...||.||+|++|| +.++..|++.+.++|.+.. -.++++|+|+||+.++..|
T Consensus 459 ~~~~QH~G~G~~L~-------------------------~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~gpYm 511 (515)
T COG1243 459 EDEWQHRGYGRELL-------------------------EEAERIAREEGAKKILVISGIGVREYYRKLGYELDGPYM 511 (515)
T ss_pred cchhhcccHHHHHH-------------------------HHHHHHHHhhccccEEEEecccHHHHHHHhCccccCCcc
Confidence 47899999999999 9999999999998888777 5799999999999887644
|
|
| >COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.80 E-value=0.2 Score=52.39 Aligned_cols=83 Identities=22% Similarity=0.432 Sum_probs=54.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc----------------CcEEEEEE--CCeEEEEEEEe-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL----------------DSFYVVER--EGQIIACAALF- 506 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l----------------~~~~V~~~--~g~iiG~~~l~- 506 (634)
..+||+...|++++.++- ...+.- .|.+.+.+.+.+ ..++|.|+ .|+++|++++.
T Consensus 2 lvvRP~~~aDl~al~~LA---~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a 78 (336)
T COG3138 2 LVVRPVERADLEALMELA---VKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEA 78 (336)
T ss_pred cccccccccCHHHHHHHH---HhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEE
Confidence 358999999999999884 233221 333444444433 25778887 79999998873
Q ss_pred ------eecC----------------------------CCeEEEEEEEECCCCcCCCHHHHH
Q 006709 507 ------PFFK----------------------------EKCGEVAAIGVSPECRGQGQGDKL 534 (634)
Q Consensus 507 ------~~~~----------------------------~~~~ei~~l~V~p~~rgqGiG~~L 534 (634)
||++ ..+.|+..+|++||||.-+.|+.|
T Consensus 79 ~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Ll 140 (336)
T COG3138 79 AVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLL 140 (336)
T ss_pred eeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhh
Confidence 2211 122578899999999977777544
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.22 Score=55.71 Aligned_cols=120 Identities=17% Similarity=0.210 Sum_probs=86.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc--CcEEEEE-------ECCeEEEEEEEeeecCCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL--DSFYVVE-------REGQIIACAALFPFFKEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l--~~~~V~~-------~~g~iiG~~~l~~~~~~~~~ei~~ 518 (634)
..++.+.+.+++.|.+|.+....-... .+.+.+++.+.. ..|+|.. -|.-+||++.+.. ++...+|..
T Consensus 414 l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~k--k~~~w~IDt 491 (574)
T COG3882 414 LTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEK--KESEWFIDT 491 (574)
T ss_pred EEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEe--cCCeEEhHH
Confidence 468889999999999997643322222 344777777733 3455443 2567999988873 445666666
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH------HhHHHHHhCCCe
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFR 592 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~------~a~~~Y~k~GF~ 592 (634)
+..+-.-=|+++-..|| ..+++.|.+.|+..++..-. .-.+||+++||+
T Consensus 492 ~lmSCRVlgRkvE~~l~-------------------------~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~ 546 (574)
T COG3882 492 FLMSCRVLGRKVEQRLM-------------------------NSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFK 546 (574)
T ss_pred HHHHHHHHHHHHHHHHH-------------------------HHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhccc
Confidence 66555555889999999 99999999999999987652 367899999999
Q ss_pred ecc
Q 006709 593 ECS 595 (634)
Q Consensus 593 ~~~ 595 (634)
..+
T Consensus 547 l~~ 549 (574)
T COG3882 547 LKG 549 (574)
T ss_pred ccc
Confidence 654
|
|
| >COG5628 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.75 Score=42.52 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=54.7
Q ss_pred HhhcCcEEEEEECCeEEEEEEEeeecC---CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchH
Q 006709 484 LKALDSFYVVEREGQIIACAALFPFFK---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR 560 (634)
Q Consensus 484 ~~~l~~~~V~~~~g~iiG~~~l~~~~~---~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~ 560 (634)
......-|....+|.+||++.+..... +-.--+..+++-..|||+|+|++..
T Consensus 33 ~~~~~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aa------------------------- 87 (143)
T COG5628 33 RDPVREAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAA------------------------- 87 (143)
T ss_pred cCcccceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHH-------------------------
Confidence 333445666778899999998753211 1223466789999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEec--HHhHHHHHhCCC
Q 006709 561 DYIEKKAASLGLDMLFLLT--TRTADWFKSRGF 591 (634)
Q Consensus 561 ~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF 591 (634)
+.|-..+ .|+-.|-..- ++|+.||++.=+
T Consensus 88 K~If~~~--~g~w~Va~i~EN~PA~~fwK~~~~ 118 (143)
T COG5628 88 KAIFGSA--WGVWQVATVRENTPARAFWKRVAE 118 (143)
T ss_pred HHHHHHh--hceEEEEEeccCChhHHHHHhhhc
Confidence 6665544 3444333222 689999998644
|
|
| >PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.19 Score=42.17 Aligned_cols=22 Identities=36% Similarity=0.516 Sum_probs=20.4
Q ss_pred EEEEEEEECCCCcCCCHHHHHH
Q 006709 514 GEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
+-|..|.|+|.+|++||+++||
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Ll 27 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLL 27 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHH
Confidence 4578999999999999999999
|
|
| >COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=89.60 E-value=4.1 Score=41.15 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=61.6
Q ss_pred cEEEE-EECCeEEEEEEEeeecC--------------------CCeEEEEEEEECC--CCcCCC----HHHHHHhhhccc
Q 006709 489 SFYVV-EREGQIIACAALFPFFK--------------------EKCGEVAAIGVSP--ECRGQG----QGDKLLGLCIWP 541 (634)
Q Consensus 489 ~~~V~-~~~g~iiG~~~l~~~~~--------------------~~~~ei~~l~V~p--~~rgqG----iG~~Ll~~~i~~ 541 (634)
.++++ ..+|+|+||+.+-|... ....|...++|++ .-+..| ++..|+
T Consensus 53 ~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~------ 126 (209)
T COG3916 53 VYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELF------ 126 (209)
T ss_pred eEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHH------
Confidence 44555 57899999999865321 1347888999997 333333 356677
Q ss_pred ccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 542 LLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
..+.+++...|++.|...| +...+.+++.||...-+
T Consensus 127 -------------------~g~ie~a~~~G~~~IvtVt~~~meril~r~Gw~~~ri 163 (209)
T COG3916 127 -------------------AGMIEYALARGITGIVTVTDTGMERILRRAGWPLTRI 163 (209)
T ss_pred -------------------HHHHHHHHHcCCceEEEEEchHHHHHHHHcCCCeEEc
Confidence 8899999999999999888 45677899999977554
|
|
| >KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.54 Score=54.65 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=21.3
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhh
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGL 537 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~ 537 (634)
+.|-.|+|||+|++.|+|++-++.
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqL 638 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQL 638 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHH
Confidence 567899999999999999999943
|
|
| >cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish | Back alignment and domain information |
|---|
Probab=87.65 E-value=1.4 Score=39.52 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=35.8
Q ss_pred EEEEEECCeEEEEEEEeeec-CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 490 FYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 490 ~~V~~~~g~iiG~~~l~~~~-~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
.+-+..++...||+.+.+-. .....+|..++|.|..||+|+|+.|+
T Consensus 10 ~~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf 56 (99)
T cd04264 10 LHAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALW 56 (99)
T ss_pred ceEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHH
Confidence 34444556688888887421 23678999999999999999999999
|
DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish | Back alignment and domain information |
|---|
Probab=87.37 E-value=1.4 Score=39.52 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=33.5
Q ss_pred EEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 491 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 491 ~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
+-+..++..=||+.+.+-......+|..++|.|..||+|+|+.|+
T Consensus 12 ~~~y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf 56 (99)
T cd04265 12 HTIYLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALW 56 (99)
T ss_pred eEEEEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHH
Confidence 334444556667767642213678999999999999999999999
|
This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=84.55 E-value=7.2 Score=39.01 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=74.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC------cEEEEEECC-eEEEEEEEeeecC-----CCe--
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------SFYVVEREG-QIIACAALFPFFK-----EKC-- 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~------~~~V~~~~g-~iiG~~~l~~~~~-----~~~-- 513 (634)
..+|+++++|++++..+++.+.+.--+ ...+.|++..++. ..||+++++ +|-.++.++..+. ++.
T Consensus 29 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~ 108 (190)
T PF02799_consen 29 PGLRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKT 108 (190)
T ss_dssp TTEEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSE
T ss_pred CccccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCccc
Confidence 458999999999999999988776443 3347888888873 467777764 8999988864432 212
Q ss_pred ---EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhC
Q 006709 514 ---GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSR 589 (634)
Q Consensus 514 ---~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~ 589 (634)
+++ -.++.... =-..|+ ..+.-.|++.|++...+.. -.-..|.+.+
T Consensus 109 l~aAY~-fY~~~~~~----~l~~Lm-------------------------~DaLi~Ak~~gfDVFNaLd~mdN~~fL~~l 158 (190)
T PF02799_consen 109 LKAAYS-FYYVATST----RLKELM-------------------------NDALILAKNEGFDVFNALDLMDNSSFLEDL 158 (190)
T ss_dssp EEEEEE-EEEEESSS----HHHHHH-------------------------HHHHHHHHHTTESEEEEESTTTGGGTTTTT
T ss_pred eeeeee-eeeeecCC----CHHHHH-------------------------HHHHHHHHHcCCCEEehhhhccchhhHhhC
Confidence 333 22333331 122344 6666788999999887776 2344678889
Q ss_pred CCeec
Q 006709 590 GFREC 594 (634)
Q Consensus 590 GF~~~ 594 (634)
.|.+-
T Consensus 159 KFg~G 163 (190)
T PF02799_consen 159 KFGPG 163 (190)
T ss_dssp T-EEE
T ss_pred CccCC
Confidence 99763
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A .... |
| >PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=84.54 E-value=12 Score=36.53 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=60.5
Q ss_pred ccCccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEE-EE--ECCeEEEEEEEeeec------
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYV-VE--REGQIIACAALFPFF------ 509 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V-~~--~~g~iiG~~~l~~~~------ 509 (634)
.....+|-.++.+++.-+.++.+ -...+.+-+.-.+. .+-+ +. ..+++|||+...|..
T Consensus 27 ~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv~~~ 106 (162)
T PF01233_consen 27 STLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRVRDK 106 (162)
T ss_dssp EE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTE
T ss_pred EecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEEeee
Confidence 44455566666666654444332 13445555554553 2222 32 369999999887642
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcE
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~ 574 (634)
..+..+|.-|+||+.+|+++++--|+ +++...+...|+-.
T Consensus 107 ~~~~~eINFLCVhKklRskrlAPvLI-------------------------kEItRRvn~~gI~q 146 (162)
T PF01233_consen 107 VIKMVEINFLCVHKKLRSKRLAPVLI-------------------------KEITRRVNLQGIWQ 146 (162)
T ss_dssp EEEEEEEEEEEE-GGGTTSSHHHHHH-------------------------HHHHHHHHTTT--E
T ss_pred EeeeeeEEEEeecHhHhhcCCcHHHH-------------------------HHHHHHhhhcCcee
Confidence 12458999999999999999999999 88888887777644
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A .... |
| >KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.89 E-value=8.9 Score=41.67 Aligned_cols=115 Identities=18% Similarity=0.225 Sum_probs=73.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC------cEEEEEE-CCeEEEEEEEeeecC-----C--C-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFK-----E--K- 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~------~~~V~~~-~g~iiG~~~l~~~~~-----~--~- 512 (634)
..+|++++.|++++.+|+..+...-.+ ...+.|++..++. ..||++. +|+|-++++++..+. . +
T Consensus 261 ~G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~kt 340 (421)
T KOG2779|consen 261 PGLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKT 340 (421)
T ss_pred CCcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCcce
Confidence 468999999999999999887765444 3346788887763 4566665 899999998874332 1 1
Q ss_pred --eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhC
Q 006709 513 --CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSR 589 (634)
Q Consensus 513 --~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~ 589 (634)
.+++ .-.|+.+-+ =..|+ .-+.-.++..|++-..+.. -.-..|++.+
T Consensus 341 l~aaYl-yY~v~~~t~----~~~lv-------------------------nDalilak~~gfDVFNAld~meN~~fl~~L 390 (421)
T KOG2779|consen 341 LQAAYL-YYNVATSTP----LLQLV-------------------------NDALILAKQKGFDVFNALDLMENESFLKDL 390 (421)
T ss_pred eeeeeE-EEeccCCcc----HHHHH-------------------------HHHHHHHHhcCCceeehhhhhhhhhHHHhc
Confidence 1333 223433310 12233 4444467788888665544 3456688999
Q ss_pred CCee
Q 006709 590 GFRE 593 (634)
Q Consensus 590 GF~~ 593 (634)
+|-+
T Consensus 391 kFg~ 394 (421)
T KOG2779|consen 391 KFGP 394 (421)
T ss_pred CcCc
Confidence 9965
|
|
| >TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated | Back alignment and domain information |
|---|
Probab=82.65 E-value=8.5 Score=41.15 Aligned_cols=81 Identities=17% Similarity=0.179 Sum_probs=58.8
Q ss_pred cEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH
Q 006709 489 SFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567 (634)
Q Consensus 489 ~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a 567 (634)
.+++++ .+|++||.+.+... .+.......+.+++++..+-+..|+ -.+.++|
T Consensus 196 ~l~~a~~~~g~~va~~l~~~~--~~~~~~~~~g~~~~~~~~~~~~lL~-------------------------w~~i~~a 248 (330)
T TIGR03019 196 EVLTVRLGDGVVASAVLSFYF--RDEVLPYYAGGLREARDVAANDLMY-------------------------WELMRRA 248 (330)
T ss_pred EEEEEEeCCCCEEEEEEEEEe--CCEEEEEeccChHHHHhhChHHHHH-------------------------HHHHHHH
Confidence 356667 68999988776633 2333322456789999999999999 8888999
Q ss_pred HHcCCcEEEEecH----HhHHHHHhCCCeeccc
Q 006709 568 ASLGLDMLFLLTT----RTADWFKSRGFRECSI 596 (634)
Q Consensus 568 ~~~g~~~l~l~t~----~a~~~Y~k~GF~~~~~ 596 (634)
.+.|++..-+... ...+|-++.||++...
T Consensus 249 ~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l 281 (330)
T TIGR03019 249 CERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPL 281 (330)
T ss_pred HHCCCcEEEcCCCCCCCccHHHHhcCCCeeccc
Confidence 9999998877652 3555667789988654
|
Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members |
| >PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus | Back alignment and domain information |
|---|
Probab=81.04 E-value=4.1 Score=40.66 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=26.6
Q ss_pred eEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 498 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 498 ~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
.++||-.=... ....--+++|.|-|.||++|+|+.|+
T Consensus 66 h~vGyFSKEk~-s~~~~NLsCIl~lP~yQrkGyG~~LI 102 (188)
T PF01853_consen 66 HIVGYFSKEKE-SWDNNNLSCILTLPPYQRKGYGRFLI 102 (188)
T ss_dssp EEEEEEEEESS--TT-EEESEEEE-GGGTTSSHHHHHH
T ss_pred eeEEEEEEEec-ccCCeeEeehhhcchhhhcchhhhhh
Confidence 47777655422 22335789999999999999999999
|
These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 634 | ||||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 3e-30 | ||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 3e-30 | ||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 3e-30 | ||
| 3e0k_A | 150 | Crystal Structure Of C-Termianl Domain Of N-Acetylg | 3e-21 | ||
| 2buf_A | 300 | Arginine Feed-Back Inhibitable Acetylglutamate Kina | 5e-14 | ||
| 2bty_A | 282 | Acetylglutamate Kinase From Thermotoga Maritima Com | 2e-12 | ||
| 2rd5_A | 298 | Structural Basis For The Regulation Of N-Acetylglut | 1e-11 | ||
| 2jj4_A | 321 | The Complex Of Pii And Acetylglutamate Kinase From | 4e-11 | ||
| 3zzf_A | 307 | Crystal Structure Of The Amino Acid Kinase Domain F | 8e-11 | ||
| 3zzi_A | 464 | Crystal Structure Of A Tetrameric Acetylglutamate K | 1e-10 | ||
| 3s6k_A | 467 | Crystal Structure Of Xcnags Length = 467 | 1e-09 | ||
| 2ap9_A | 299 | Crystal Structure Of Acetylglutamate Kinase From My | 2e-07 | ||
| 3l86_A | 279 | The Crystal Structure Of Smu.665 From Streptococcus | 6e-04 |
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of N-Acetylglutamate Synthase From Vibrio Parahaemolyticus Length = 150 | Back alignment and structure |
|
| >pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase Length = 300 | Back alignment and structure |
|
| >pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed With Its Inhibitor Arginine Length = 282 | Back alignment and structure |
|
| >pdb|2RD5|A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana Length = 298 | Back alignment and structure |
|
| >pdb|2JJ4|A Chain A, The Complex Of Pii And Acetylglutamate Kinase From Synechococcus Elongatus Pcc7942 Length = 321 | Back alignment and structure |
|
| >pdb|3ZZF|A Chain A, Crystal Structure Of The Amino Acid Kinase Domain From Saccharomyces Cerevisiae Acetylglutamate Kinase Complexed With Its Substrate N-Acetylglutamate Length = 307 | Back alignment and structure |
|
| >pdb|3ZZI|A Chain A, Crystal Structure Of A Tetrameric Acetylglutamate Kinase From Saccharomyces Cerevisiae Length = 464 | Back alignment and structure |
|
| >pdb|3S6K|A Chain A, Crystal Structure Of Xcnags Length = 467 | Back alignment and structure |
|
| >pdb|2AP9|A Chain A, Crystal Structure Of Acetylglutamate Kinase From Mycobacterium Tuberculosis Cdc1551 Length = 299 | Back alignment and structure |
|
| >pdb|3L86|A Chain A, The Crystal Structure Of Smu.665 From Streptococcus Mutans Ua159 Length = 279 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 634 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 9e-78 | |
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 7e-76 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 7e-48 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 1e-29 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 6e-06 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 4e-29 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 2e-05 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 5e-29 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 1e-05 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 1e-28 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 1e-05 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 5e-27 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 3e-05 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 2e-25 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 4e-24 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 8e-23 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 2e-22 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 3e-22 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 6e-21 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 2e-19 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 8e-17 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 2e-10 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 2e-09 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 5e-09 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 1e-08 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 2e-08 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 2e-08 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 8e-08 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 8e-08 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 9e-08 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 3e-07 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 3e-07 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 3e-07 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 5e-07 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 7e-07 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 1e-06 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 1e-06 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 2e-06 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 2e-06 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 2e-06 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 3e-06 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 3e-06 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 3e-06 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 3e-06 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 3e-06 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 4e-06 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 4e-06 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 5e-06 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 5e-06 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 6e-06 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 8e-06 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 9e-06 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 1e-05 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 1e-05 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 1e-05 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 1e-05 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 1e-05 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 2e-05 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 3e-05 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 3e-05 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 3e-05 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 3e-05 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 3e-05 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 4e-05 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 4e-05 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 4e-05 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 6e-05 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 6e-05 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 7e-05 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 8e-05 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 8e-05 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 9e-05 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 9e-05 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 1e-04 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 2e-04 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 2e-04 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 2e-04 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 2e-04 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 2e-04 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 3e-04 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 3e-04 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 3e-04 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 3e-04 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 3e-04 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 3e-04 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 4e-04 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 4e-04 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 6e-04 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 6e-04 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 7e-04 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 7e-04 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 9e-04 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 9e-78
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 11/251 (4%)
Query: 69 GNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHH 128
G V + + FV FREA PY+ RG T V I G ++ L+ + DI L
Sbjct: 13 GLVPRGSHMNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQ 72
Query: 129 LGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSP 188
LGIR VL+ G + +D+L + +G Y R+TD SL A + AG +R EA L
Sbjct: 73 LGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRFEAALC- 131
Query: 189 GPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248
+ V + SGNFL A+ GV+DG D G ++K D +R +L
Sbjct: 132 -------GSVSGFA--RAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQL 182
Query: 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFL 307
D G +V + LG+S G+ N + + A + A++++A+KL+ + I G L L
Sbjct: 183 DAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETL 242
Query: 308 TLQEADSLIRQ 318
+ QEA SL
Sbjct: 243 SAQEAQSLAEH 253
|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 248 bits (636), Expect = 7e-76
Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 26/218 (11%)
Query: 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 463
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 464 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 523
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA 583
+ + G G++LL +I KA +G+ LF L+T T
Sbjct: 382 QAQDGGYGERLL-------------------------AHIIDKARGIGISRLFALSTNTG 416
Query: 584 DWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKL 620
+WF RGF+ S + +PE RRK + RNS +++L
Sbjct: 417 EWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRL 454
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 7e-48
Identities = 52/173 (30%), Positives = 90/173 (52%), Gaps = 25/173 (14%)
Query: 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP 507
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P
Sbjct: 3 AEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYP 62
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567
+ +E+ E+A + + P+ R +G LL +Y++ ++
Sbjct: 63 YSEERKAEMACVAIHPDYRDGNRGLLLL-------------------------NYMKHRS 97
Query: 568 ASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
S ++ +F+LTT + WF+ +GF E ++ +P ++ N R SK L
Sbjct: 98 KSENINQIFVLTTHSLHWFREQGFYEVGVDYLPGAKQGLYNFQRKSKILALDL 150
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 1e-29
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 54 ERNLSKCKVFSEAMGGNVEETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSS 113
+ G ++ + V+ EA PYL G T VV G +
Sbjct: 4 SHHHHHHSSGLVPRGSHMSSEFIEAGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQ 63
Query: 114 PYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAM 172
L + +++DI FL +G+R V+V G +I+ L G E ++ R+TD++ M
Sbjct: 64 EELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDAD----TM 119
Query: 173 EAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231
E M++ +++ I + I G + VG G + A+ D G
Sbjct: 120 EVV---EMVLVGRVNKD--IVSRINTTGGRA----VGFCGTDGRLVLARPH---DQEGIG 167
Query: 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 291
GEV V+ + L+ G + ++S++ +G+ N N VA A A+ A+KLI +
Sbjct: 168 FVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILL 227
Query: 292 IDGP-ILDE---SGHLIRFLTLQEADSLIRQ 318
D IL++ LI L + ++ LI Q
Sbjct: 228 TDTRGILEDPKRPESLIPRLNIPQSRELIAQ 258
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 277 AQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-29
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 21/238 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
E+ P++ RG T VV G ++SP L ++ D+ L +G+R +LV G I++ L
Sbjct: 26 ESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYL 85
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ A++ R+TD+ ME M++ K++ + + I G ++
Sbjct: 86 KQLNIPAEFRDGLRVTDAT----TMEIV---SMVLVGKVNKN--LVSLINAAGATA---- 132
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+S G L A+ + G GEV +VD + +R +D G + +++++ SG+
Sbjct: 133 VGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQ 190
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLIRQRV 320
N N VA A A+ A+KLI + D IL+ LI+ + ++ +I
Sbjct: 191 AYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGK 248
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
+GV+ ++DG LL E+ +G GTM+
Sbjct: 265 AQGVKTASIIDGRRQHSLLHEIMSDEGAGTMI 296
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 5e-29
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA P+L G VV G ++ L D+AFL + GI V+V G QI +L
Sbjct: 15 EALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAML 74
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
G E + G +R+T E ++ A RM++ ++ + N I HG +
Sbjct: 75 RRLGIEGDFKGGFRVTTPE----VLDVA---RMVLFGQVGRE--LVNLINAHGPYA---- 121
Query: 207 VGVSVASGNFLAAKRKGVV---DGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
VG++ A R+ V D G G+V +V+ M + + G + ++S L +
Sbjct: 122 VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDA 181
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD---ESGHLIRFLTLQEADSLI 316
G V N N A A A A+ A+KL+ + D + + L+ + L+
Sbjct: 182 DGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLL 238
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
GV H++DG + +L+ELF G GT V
Sbjct: 257 IGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G TFV+ G + ++DI L + GI+ ++V G I +++
Sbjct: 11 EALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMM 70
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
+ G E + +R+TD + ME M++ K++ I + HG +
Sbjct: 71 KDLGIEPVFKNGHRVTDEK----TMEIV---EMVLVGKINKE--IVMNLNLHGGRA---- 117
Query: 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 266
VG+ + A+++ D G G+VKKV+ + ++ + +++ +G G
Sbjct: 118 VGICGKDSKLIVAEKET--KHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGH 175
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 318
N N A A ++ A+KLI + D +L + G LI LT EA+ LIR
Sbjct: 176 SYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD-GKLISTLTPDEAEELIRD 227
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 246 RGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-27
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIRFVLVPGTHVQIDKLL 147
EA PY+ G T V+ G + S L +D+ + +GI V+V G QI LL
Sbjct: 16 EALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLL 75
Query: 148 SERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHE 206
E+ ++ R+TD+ M+ M++ +++ I N I RHG S+
Sbjct: 76 KRLSIESHFIDGMRVTDAA----TMDVV---EMVLGGQVNKD--IVNLINRHGGSA---- 122
Query: 207 VGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDGGCLVILS 257
+G++ + AK+ V + +D G GEV V+V + + G + +++
Sbjct: 123 IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIA 182
Query: 258 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLI 316
+G S+GE N N VA A A++A+KL+ + + ++D+ G ++ L+ ++ + LI
Sbjct: 183 PIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELI 242
Query: 317 RQ 318
Sbjct: 243 AD 244
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 3e-05
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 412 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446
+ GV H++DG + +LLE+F G+GT++++
Sbjct: 263 QGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-25
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 28/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ +E YL VV + G ++ L+ + ++FL +G+ +++ G
Sbjct: 42 MASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDD-LEALTSSLSFLQEVGLTPIVLHGA 100
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRH 198
Q+D LS G E + + R+T +LA ++EA ++++
Sbjct: 101 GPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVEA----------LQQN 150
Query: 199 GDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258
G + ++ G A+ ++ YG GEVK V++ + L G + ++++
Sbjct: 151 GARA----TSIT---GGVFEAEY---LNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITS 200
Query: 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLI 316
LG + SG++LN N A ++ K+I + +LD G LI + L E D L+
Sbjct: 201 LGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLM 260
Query: 317 RQ 318
+Q
Sbjct: 261 QQ 262
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-24
Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 35/267 (13%)
Query: 88 REAWPYLWAHRGGT---FVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQI 143
+E YL G F VI + G ++ L + +AFL +G+ V+V G Q+
Sbjct: 43 KEIREYLHRFSGIDQERFAVIKVGGAVIQDD-LPGLASALAFLQTVGLTPVVVHGGGPQL 101
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR 203
D L + + R+T E++ + + + IR G +
Sbjct: 102 DAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANLALVDA---------IRDAGGRA- 151
Query: 204 WHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 263
V G F A +VD G GE + + + + G IL+ LG +
Sbjct: 152 ---AAVP--RGVFEA----DIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETP 202
Query: 264 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLIRQ--- 318
G ++N N A A++ K++ + +LDE G ++ + L + L++
Sbjct: 203 DGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADWV 262
Query: 319 ------RVKQSEIAANYVKAVAEEDIT 339
++++ + + + + IT
Sbjct: 263 NGGMRLKLEEIKRLLDDLPLSSSVSIT 289
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 8e-23
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL----WAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + V+ + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTA---------LEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Length = 279 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 2e-22
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 30/239 (12%)
Query: 89 EAWPYLWAHRGGTFVVIISGEIVSSPYLDPILK-----DIAFLHHLGIRFVLVPGTHVQI 143
V+ I G L I G + V+V G I
Sbjct: 26 GGQQMGRGSMKDIIVIKIGGVA------SQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAI 79
Query: 144 DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICN-IRRHGDSS 202
+KL+ E K + R+T + M + + + +R+ G S
Sbjct: 80 NKLMEENQVPVKKINGLRVTSKDD----MVLV---SHALLDLVGKN--LQEKLRQAGVSC 130
Query: 203 RWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS 262
+ + +AA D YG G+V ++ + E L+ + IL++LGYS
Sbjct: 131 ----QQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYS 183
Query: 263 SSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 320
G++LN N +ATA A+A+ ADKLI + + +L+ G ++ +T + I V
Sbjct: 184 KEGDMLNINADYLATAVAVALAADKLILMTNVKGVLEN-GAVLEKITSHQVQEKIDTAV 241
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Length = 307 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 3e-22
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 84 VKWFREAWPYL---WAHRGGTFVVI-ISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGT 139
+ RE YL + F VI + G I+S L + +AFL+H+G+ +++ GT
Sbjct: 29 ISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDN-LHELASCLAFLYHVGLYPIVLHGT 87
Query: 140 HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHG 199
Q++ L +G E Y+ RITD ++A + + + + + + G
Sbjct: 88 GPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKL---------VTALEQLG 138
Query: 200 DSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL 259
+ ++ SG F A +D Y G +K V + + G L IL++L
Sbjct: 139 VRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSL 188
Query: 260 GYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLI 316
++SG++LN N A A E K++ + G I +G I + L +E D L+
Sbjct: 189 AETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLM 248
Query: 317 RQ 318
+Q
Sbjct: 249 KQ 250
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Length = 258 | Back alignment and structure |
|---|
Score = 87.5 bits (218), Expect = 2e-19
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 121 KDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL-AAAMEAAGGI 178
+ R V+V G +D+L+ K R+T ++ + AG
Sbjct: 25 SALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTA 84
Query: 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238
+ A ++H ++ VG+ + G+ + + + G G +
Sbjct: 85 NKTLLAW---------AKKHQIAA----VGLFLGDGDSVKVTQLDE----ELGHVGLAQP 127
Query: 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-IL 297
+ L+ G L ++S++G + G+++N N + ATA A + A LI + D IL
Sbjct: 128 GSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGIL 186
Query: 298 DESGHLIRFLTLQEADSLIRQRV 320
D G I +T +A+ LI Q +
Sbjct: 187 DGKGQRIAEMTAAKAEQLIEQGI 209
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 8e-17
Identities = 23/153 (15%), Positives = 53/153 (34%), Gaps = 33/153 (21%)
Query: 459 LSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGE 515
L +K I P + +V+ + +S +++ + ++I + ++ E
Sbjct: 18 LIDLKNIFSRQLPKMPKEYIVK---LVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAE 74
Query: 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDML 575
VA + V+ + +G G +L+ + + ++ L
Sbjct: 75 VAFLAVTANEQVRGYGTRLM-------------------------NKFKDHMQKQNIEYL 109
Query: 576 FLLTTRTA-DWFKSRGFRECSIEMIPEERRKRI 607
A +FK +GF + M E+ + I
Sbjct: 110 LTYADNFAIGYFKKQGFTK-EHRMPQEKWKGYI 141
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-10
Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 44/184 (23%)
Query: 452 RTAKVTDLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY---------VVEREGQII 500
+ + + I + E + R D+ L+ ++ Y + I+
Sbjct: 7 IEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIV 66
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR 560
L + + V R G KLL I
Sbjct: 67 GTIGLIRL-DNNMSALKKMFVDKGYRNLKIGKKLLDKVI--------------------- 104
Query: 561 DYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFRECSIEMIPEERRKRINLSRNSKYY 616
+D ++L T ++ + GFRE +P L ++++Y
Sbjct: 105 ----MTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFP---KLDVDNRFY 157
Query: 617 MKKL 620
+ L
Sbjct: 158 YRNL 161
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} Length = 181 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 2e-09
Identities = 23/179 (12%), Positives = 62/179 (34%), Gaps = 45/179 (25%)
Query: 458 DLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY--------VVEREGQIIACAALFP 507
L+ + +I +E+ ++ +++ + ++++Y + +++ AL
Sbjct: 31 HLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR 90
Query: 508 FFKEKCGEVAAIGVSPECRGQ--GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEK 565
+K + P+ RG G KL +
Sbjct: 91 -IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFM-------------------------L 124
Query: 566 KAASLGLDMLFLLTTRTAD----WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
A + + L T +++++GF++ + + + + R+S+ Y+K L
Sbjct: 125 FARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYI---FPDRDSRIYVKLL 180
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Length = 157 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-09
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 44/167 (26%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDS--------FYVVEREGQIIA 501
R A + D+S + I + + E D+EL + ++ ++ E QIIA
Sbjct: 5 RKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIA 64
Query: 502 CAAL--------FPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553
AA+ + + G + + P RG G +L
Sbjct: 65 TAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGML------------------ 106
Query: 554 NGFPFLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEMI 599
D + +A + + L+ ++ K GF++ +
Sbjct: 107 -------DRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLE 146
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 1e-08
Identities = 20/154 (12%), Positives = 48/154 (31%), Gaps = 36/154 (23%)
Query: 459 LSGIKQIIQPLVESGALVRRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCG 514
L G++ + L R E + + + + ++G++I F +
Sbjct: 26 LVGLQNVFS-----HQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT 80
Query: 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574
E+ V+ + +G G L+ +++++ +
Sbjct: 81 EIVFCAVTSNEQVKGYGTHLM-------------------------NHLKEYHIKHNILY 115
Query: 575 LFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRI 607
A +FK +GF + I++ I
Sbjct: 116 FLTYADEYAIGYFKKQGFSK-DIKVPKSRYLGYI 148
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} Length = 166 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 55/190 (28%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVR----------RTDEELLKALDS----FYVVEREG 497
R AK DL + ++ L + ++ + + LD YV E +
Sbjct: 6 RRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDD 65
Query: 498 QIIACAALFPFF-------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDH 550
II + + + E R +G ++L+
Sbjct: 66 VIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLM--------------- 110
Query: 551 ISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 606
IE++ G+ +F+ +++ +G E + RK
Sbjct: 111 ----------MRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHYL-----RKP 155
Query: 607 INLSRNSKYY 616
+N + ++
Sbjct: 156 LNRLEHHHHH 165
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 Length = 172 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 52/191 (27%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---------------LKALDSFYVVERE 496
R D + I +E ++E+ + + +
Sbjct: 11 RPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQ 70
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556
G + A+L + + + V P+ G+ G L+
Sbjct: 71 GVPVGFASL-----KGPDHIDMLYVHPDYVGRDVGTTLI--------------------- 104
Query: 557 PFLRDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKY 615
D +EK A + G +L + + A ++F RG+ + N
Sbjct: 105 ----DALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSINGEWLAN------T 154
Query: 616 YMKKLLPDTSG 626
M K L D++
Sbjct: 155 TMTKSLADSAA 165
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* Length = 164 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 8e-08
Identities = 23/187 (12%), Positives = 44/187 (23%), Gaps = 63/187 (33%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL----------VRRTDEELLKALDS----FYVVEREG 497
R A V D + ++ + E+ A+ V E
Sbjct: 4 REATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDER 63
Query: 498 QIIACAALFPFF---------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
+ I ++ + K ++ + V RG G G +
Sbjct: 64 EKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIF------------- 110
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADW-------FKSRGFRECSIEMIPE 601
+ I + +D + L D+ + S G R M
Sbjct: 111 ------------EAIISYGKAHQVDAIELD---VYDFNDRAKAFYHSLGMRCQKQTM--- 152
Query: 602 ERRKRIN 608
+
Sbjct: 153 --ELPLL 157
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} Length = 153 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 8e-08
Identities = 25/169 (14%), Positives = 45/169 (26%), Gaps = 48/169 (28%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------VVEREGQI 499
R + DL + + + + T + + V+E G
Sbjct: 5 RPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAP 64
Query: 500 IACAALFPF---------FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDH 550
+A L ++K G + + V P R +G G L+
Sbjct: 65 LAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALM--------------- 109
Query: 551 ISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 598
+ E + A G+ L T G+ + EM
Sbjct: 110 ----------NRAEAEFAERGIAFAVLHATEMGQPLYARMGWSPTT-EM 147
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 163 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 9e-08
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 30/112 (26%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD 549
Y ++ L + + E+ I V + +G G +L+
Sbjct: 41 CYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLV-------------- 85
Query: 550 HISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADW----FKSRGFRECSIE 597
+KA LG D + + T ++ ++ GFR +I+
Sbjct: 86 -----------LDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAID 126
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 3e-07
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 30/112 (26%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD 549
YV ++ G +I L + K E+ I V+ +G+G G KLL
Sbjct: 39 TYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQGKGIGKKLL-------------- 83
Query: 550 HISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADW----FKSRGFRECSIE 597
+ + A G+ L + T ++ ++ GFR SI+
Sbjct: 84 -----------RHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 124
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 3e-07
Identities = 18/97 (18%), Positives = 27/97 (27%), Gaps = 9/97 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAAL 505
R D + + Q + L A +V Q+ +
Sbjct: 11 RLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEV 70
Query: 506 FPFFKEKCGEVAA---IGVSPECRGQGQGDKLLGLCI 539
P + IGVSP+ + QG G LL
Sbjct: 71 HPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIK 107
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Length = 161 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKALDSFYVV---EREGQIIACAAL 505
R + +DLS +++ L E+ L ++ + V + G+I+ A+L
Sbjct: 24 RVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASL 83
Query: 506 F--PFFKEKCGEVA---AIGVSPECRGQGQGDKLL 535
P F V + V P RG G G L+
Sbjct: 84 MIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALI 118
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} Length = 266 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 5e-07
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 16/103 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------------DSFYVVERE 496
+D+ IK + G + S YV+
Sbjct: 9 DRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVS 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
G+ +A + + + + V PE RG G ++ I
Sbjct: 69 GRPVATIHME-KLPDGSVMLGGLRVHPEYRGSRLGMSIMQETI 110
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} Length = 150 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-07
Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALDS-----FYVVEREGQIIACAAL 505
R A DL G+ ++ Q L S L + + A+ + +V G+ +A A L
Sbjct: 9 RAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATL 68
Query: 506 FPFFK-----EKCGEVAAIGVSPECRGQGQGDKLL 535
+ + RG+G G ++
Sbjct: 69 LIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVV 103
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* Length = 160 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 9e-07
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E A+ + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + + + V+P RG G L+
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLI 97
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 64/411 (15%), Positives = 110/411 (26%), Gaps = 127/411 (30%)
Query: 268 LNCNTYEVATACALA-IEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIA 326
+C + L+ E D II + F TL + Q+ + +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDH---IIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLR 88
Query: 327 ANY---VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 383
NY + + E S + + E+R +N+ F N
Sbjct: 89 INYKFLMSPIKTEQRQ------------PSMMTRMYIEQRDRLYNDNQVFAKYN------ 130
Query: 384 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMG--- 440
+ + +L L EL A V + G+
Sbjct: 131 ----VSRLQPYLKLRQALLELRPAKNVL------ID------------------GVLGSG 162
Query: 441 -TMVASDLYEGTRTAKVTDL--SGI-----------KQIIQPLVESGALVRRTDEELLKA 486
T VA D+ + KV I + +++ L L+ + D
Sbjct: 163 KTWVALDVC---LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ---KLLYQIDPNWTSR 216
Query: 487 LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGL--------- 537
D ++ I A L K K C LL L
Sbjct: 217 SDHSSNIKLRIHSIQ-AELRRLLKSK--------PYENC--------LLVLLNVQNAKAW 259
Query: 538 ------CIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL---DMLFLLTTRTADWFKS 588
C +L TR+ ++ +I S+ L ++ LL +
Sbjct: 260 NAFNLSC--KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL----LKYLDC 313
Query: 589 RGF---RE-CS-----IEMIPEERRKRINLSRNSKYYMKKLLPDTSGIIVD 630
R RE + + +I E R + N K+ L ++
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Length = 228 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 25/177 (14%)
Query: 377 NGLWSS----EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL-- 430
+W+S + + L RL+ AAAA G+ + D ++
Sbjct: 10 RPVWNSLGGPQSELDVASG-NLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPE 68
Query: 431 -------LELFKRDGMGTMVASDLYEGT-----RTAKVTDLSGIKQIIQPLVESGALVRR 478
+ + + M+A TD+ + + E G
Sbjct: 69 PVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALAL-ATEPGPWASG 127
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
T FY V +G++ A A EV+ + PE RG+G +L+
Sbjct: 128 TWR-----YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLI 179
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Length = 162 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 27/154 (17%), Positives = 43/154 (27%), Gaps = 41/154 (26%)
Query: 480 DEELLKALDSFYVV--EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGL 537
D L + +G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 40 DLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVYIDPQHRGQQLGEKLL-- 96
Query: 538 CIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADW-----FKSRGFR 592
+E KA L L T + G++
Sbjct: 97 -----------------------AALEAKARQRDCHTL-RLETGIHQHAAIALYTRNGYQ 132
Query: 593 ECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 626
S + K L D
Sbjct: 133 TR-------CAFAPYQPDPLSVFMEKPLFADLRS 159
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 49/176 (27%)
Query: 452 RTAKVTDLSGIKQII---------------QPLVESGALVRRTDEELLKALDSFYVVERE 496
RT + + IKQI + L D Y+ E E
Sbjct: 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 73
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556
GQ+IA ++ + + V P+ R G +L
Sbjct: 74 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLK--------------------- 112
Query: 557 PFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRIN 608
+EK A ++ + K G++ ++M K I+
Sbjct: 113 ----IALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHVKM-----YKDID 159
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 162 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-06
Identities = 27/188 (14%), Positives = 48/188 (25%), Gaps = 41/188 (21%)
Query: 452 RTAKVTDLSGIKQIIQPLVE-----------SGALVRRTDEELLKALDSFYVVEREGQII 500
R A +L I Q + + + +E + Y++ E I
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK-KRLYLLVHEEMIF 62
Query: 501 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLR 560
+ A ++ + SP +G G L G +
Sbjct: 63 SMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELE---------KRAVWEGRRKMY 113
Query: 561 -DYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 619
+ F+S+GF + E + L S Y K
Sbjct: 114 AQTNHTNHRMIRF-------------FESKGFTKI------HESLQMNRLDFGSFYLYVK 154
Query: 620 LLPDTSGI 627
L + S +
Sbjct: 155 ELENQSIV 162
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} Length = 288 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 6/92 (6%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD--SFYVVEREGQIIACAALFP 507
R A D+ + I ++ E+ + + + + + +F
Sbjct: 23 RYATPDDIEDMVSIFIDAYNFPGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFF 82
Query: 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ K + +GV + +G G ++ +
Sbjct: 83 Y--NKQAWIGLMGVKKAYQRRGIGTEVFRRLL 112
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 3e-06
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 39/136 (28%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S V EG+I +F + + V R G G +LL
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYH--LHIDFLWVDESVRHDGYGSQLL------------- 85
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA--DWFKSRGFREC-SIEMIPEERRK 605
IE A G ++ L + +++K G+RE +E P+
Sbjct: 86 ------------HEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVEDHPKGH-- 131
Query: 606 RINLSRNSKYYMKKLL 621
S+++ +K L
Sbjct: 132 -------SQHFFEKRL 140
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} Length = 182 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 28 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 87
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + + + V+P RG G L+
Sbjct: 88 NFYQWQHGDFCALGNMMVAPAARGLGVARYLI 119
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-06
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 41/135 (30%)
Query: 475 LVRRTDEELLKALD---------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525
+ + E + AL +F+ ++ C AL GE+ ++ S
Sbjct: 24 MTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTR-HGEIKSMRTSASH 82
Query: 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADW 585
+G ++L +I ++A G + L L T A +
Sbjct: 83 LRKGVAKQVL-------------------------QHIIEEAEKRGYERLSLETGSMASF 117
Query: 586 ------FKSRGFREC 594
++S GF+ C
Sbjct: 118 EPARKLYESFGFQYC 132
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 190 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 3e-06
Identities = 39/183 (21%), Positives = 64/183 (34%), Gaps = 54/183 (29%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALF--------------PFFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTAD----WFKSRG 590
L ++ K+ SLG D +++T + ++ +G
Sbjct: 128 L-------------------------EFAVKRLRSLGKDP-YVVTFPNLEAYSYYYMKKG 161
Query: 591 FRE 593
FRE
Sbjct: 162 FRE 164
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* Length = 180 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 3e-06
Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 32/164 (19%)
Query: 462 IKQIIQPLVES-----GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEV 516
Q+ L + G EE++ + +++ P + E+
Sbjct: 14 KDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWEL 73
Query: 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLF 576
+ V R G +L+ +Y+EK+ AS G ++
Sbjct: 74 HPLVVESSRRKNQIGTRLV-------------------------NYLEKEVASRGGITIY 108
Query: 577 LLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
L T + + E ++ NL + + +KL
Sbjct: 109 LGTDD--LDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKL 150
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* Length = 310 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-06
Identities = 25/233 (10%), Positives = 65/233 (27%), Gaps = 40/233 (17%)
Query: 121 KDIAFLHHLGIRFVLVPGTHVQI-DKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIR 179
+ L G R ++ G Q+ + LL ++ +++ + G I
Sbjct: 33 AYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCV-----AMTQGSIG 87
Query: 180 MMIEAKLSPGPPICNIRRH------------GDSSRWH---EVGVSVASGNFLAAKRKGV 224
+ L+ I++ D + + +G + A + G
Sbjct: 88 YWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGA 147
Query: 225 V----DGVDY----GATGEVKKVDVTRMRERLDGGCLVILSN------LGYSSSGEVLNC 270
+ G + + + + + + + I +G G
Sbjct: 148 IFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVI 207
Query: 271 NTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIRQ 318
+ + A ++AD L+ + + +T+ E + +
Sbjct: 208 DKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQA 260
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 406 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 4e-06
Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 43/194 (22%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKA---LDSFYVVEREGQII 500
+ + + +++ + ESG +R + + L + E Q+I
Sbjct: 13 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 72
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554
+ A++P K G V +G PE G L+ + + + +
Sbjct: 73 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTAL---------EEMRQD 123
Query: 555 GFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 614
L +++ +G+ S ++ + R ++ +
Sbjct: 124 KQWI-----------------SYLFPYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVP 166
Query: 615 YYMKKLLPDTSGII 628
+++L D +
Sbjct: 167 GMIERLAVDHPDVF 180
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 5e-06
Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFK 510
RT +D + ++ L + + D+ ++ + F
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQS 64
Query: 511 E-KCGEVAAIGVSPECRGQGQGDKLL 535
+ + + GV P+ R G +L
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLY 90
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Length = 150 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-06
Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 41/164 (25%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKALDS-----FYVVEREGQIIACAAL 505
R +D + Q+ + + G D ++ LK + + ++ +E +II + +
Sbjct: 9 RLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGM 68
Query: 506 FPFF----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRD 561
+ + A + E R +G G +LL
Sbjct: 69 CKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLL-------------------------A 103
Query: 562 YIEKKAASLGLDMLFLLTTRTAD------WFKSRGFRECSIEMI 599
E+ + L + L + + + G+ +
Sbjct: 104 DSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSGFT 147
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Length = 166 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 6e-06
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 9/93 (9%)
Query: 452 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 509
+ A L ++ L + ++ + L + + + Q IA F
Sbjct: 25 KPASEASLKDWLELRNKLWSDSEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRF 84
Query: 510 -------KEKCGEVAAIGVSPECRGQGQGDKLL 535
G + I V P R G L+
Sbjct: 85 EYVNGTETSPVGFLEGIYVLPAHRRSGVATMLI 117
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} Length = 157 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 8e-06
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 452 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDS------FYVVEREGQIIAC 502
R A++ DL I + L E L + +KAL ++V +++A
Sbjct: 10 REARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQ 69
Query: 503 AALFP----FFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ + ++ V E R +G + L
Sbjct: 70 IMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLF 106
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Length = 165 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 9e-06
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 508
R T L + + + L A + +E L + ++ +G I A
Sbjct: 24 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 83
Query: 509 F-------KEKCGEVAAIGVSPECRGQGQGDKLL 535
+ I V P R +G +L+
Sbjct: 84 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLI 117
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Length = 190 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 1e-05
Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 41/182 (22%)
Query: 433 LFKRDGMGTMVASDLYEGT--RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 489
LF + V + L R +D G +++ L G + + + +
Sbjct: 30 LFSPSLISPDVLAVLPADYTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRA 89
Query: 490 -------FYVVEREGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLGL 537
V + EG+I+ +L F G V I V +G+ G +++
Sbjct: 90 RSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRII-- 147
Query: 538 CIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSI 596
++ A +G L + + F GF+ +
Sbjct: 148 -----------------------QALDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGL 184
Query: 597 EM 598
EM
Sbjct: 185 EM 186
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Length = 197 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 1e-05
Identities = 12/99 (12%), Positives = 32/99 (32%), Gaps = 12/99 (12%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
++D+ + ++ + E V + + F V + + +I+
Sbjct: 38 SPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLD 97
Query: 505 LFPFFKEK----CGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ I V+ + R +G G L+ + +
Sbjct: 98 YSSLYPFPSGQHIVTFG-IAVAEKERRKGIGRALVQIFL 135
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} Length = 172 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 17/105 (16%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGALVR------RTDEELLKALDS--------FYVVERE 496
R A+ D + + + + +E+ T EE+ L+ +
Sbjct: 8 REAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLN 67
Query: 497 GQIIACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLGLCI 539
G+I + +++ + I + G G LL I
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAI 112
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} PDB: 3dr8_A* Length = 174 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A D + I +I V A + L ++ V E G +
Sbjct: 7 RFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVT 66
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A+ + + G E + + V P +G+G G KLL
Sbjct: 67 GYASFGDW-RSFDGFRYTVEHS-VYVHPAHQGKGLGRKLL 104
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* Length = 150 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 1e-05
Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 34/157 (21%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALDS------FYVVEREGQIIACAA 504
D ++ + G LV R + F + Q++AC
Sbjct: 7 ERVNDFDGYNWLPLLAKSSQEGFQLVERMLRNRREESFQEDGEAMFVALSTTNQVLACGG 66
Query: 505 LFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563
+ + G + + V PE R G G LL +
Sbjct: 67 YMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIM------------------------ 102
Query: 564 EKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIP 600
A L D L L + + +++ GF+ S E I
Sbjct: 103 --SEAFLTYDRLVLYSEQADPFYQGLGFQLVSGEKIT 137
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} Length = 181 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 2e-05
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 15/92 (16%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDS-----FYVVEREGQIIACA 503
T+ V +++++ P E R E L + D ++ + I
Sbjct: 11 TTSDVQHYKFMEELLVESFPPEE-----YRELEHLREYTDRIGNFHNNIIFDDDLPIGFI 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ F ++ V +P R G G + L
Sbjct: 66 TYWDF--DEFYYVEHFATNPALRNGGYGKRTL 95
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-05
Identities = 19/120 (15%), Positives = 27/120 (22%), Gaps = 30/120 (25%)
Query: 478 RTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 534
E L +AL Y+ ++ L V + V P + QG G L
Sbjct: 29 HQTEMLEQALSHSLVIYLALDGDAVVGLIRLVGDG-FSSVFVQDLIVLPSYQRQGIGSSL 87
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRE 593
+ L T F +S GF
Sbjct: 88 M-------------------------KEALGNFKEAYQVQLATEETEKNVGFYRSMGFEI 122
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 45/170 (26%)
Query: 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLKAL-----DSFYVVERE 496
E T + IK++ + + S + EEL ++L F+V E
Sbjct: 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNE 69
Query: 497 -GQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551
+++ + K + I V RG G G LL
Sbjct: 70 RSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALL---------------- 113
Query: 552 STNGFPFLRDYIEKKAASLGLDMLFLLT--TRTA-DWFKSRGFRECSIEM 598
E+ A G + L A W++ RG++ ++ M
Sbjct: 114 ---------RKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALIM 154
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Length = 388 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 3e-05
Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 32/146 (21%)
Query: 484 LKALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGL 537
+K Y + + A L PF K K G VA + PE R G +LL
Sbjct: 41 MKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQH 100
Query: 538 CIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 597
+ + +G+ +L +++ G+ C+
Sbjct: 101 SL---------QTMKKDGYTV-----------------SMLHPFAVSFYRKYGWELCANL 134
Query: 598 MIPEERRKRINLSRNSKYYMKKLLPD 623
++ + + + + +K+ +
Sbjct: 135 LVCHMTKSDLVMKKQVNGTVKRFNKE 160
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 477 RRTDEELLKALDSFYVVEREGQIIACAALFP-----FFKEKCGEVAAIGVSPECRGQGQG 531
KA D F+V + +I+ + G + V + +G+G G
Sbjct: 44 NYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIG 103
Query: 532 DKLLGLCI 539
KLL C+
Sbjct: 104 RKLLITCL 111
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 152 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 3e-05
Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 36/134 (26%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
+ + + + V + V RGQG KLL
Sbjct: 53 NITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLL------------- 97
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA--DWFKSRGFRECSIEMIPEERRKR 606
E++A G ++ T ++ GF +
Sbjct: 98 ------------AMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKI-------GSLGP 138
Query: 607 INLSRNSKYYMKKL 620
++ ++ + K+
Sbjct: 139 LSSGQSITWLEKRF 152
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* Length = 170 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 41/155 (26%)
Query: 481 EELLKALDSFYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLC 538
+++L+ + + + C + +K + +G R G G K+L
Sbjct: 38 KDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKML--- 94
Query: 539 IWPLLSETRYDHISTNGFPFLRDYIEKKAASLG-LDMLFL---LTTRTA-DWFKSRGFRE 593
+++ G D ++L ++ +A D+++ GF
Sbjct: 95 ----------------------NHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEI 132
Query: 594 CSIEMIPEERRKR--INLSRNSKYYMKKLLPDTSG 626
E +K + + ++K L SG
Sbjct: 133 -------IETKKNYYKRIEPADAHVLQKNLKVPSG 160
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 4e-05
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 11/98 (11%)
Query: 452 RTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDS---FYVVEREGQII--A 501
R D ++++++ E+ DE L+ F + + A
Sbjct: 24 RQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYA 83
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
C P E ++ I V+P + G G LL +
Sbjct: 84 CYGPTPA-TEGTYDLYWIAVAPHRQHSGLGRALLAEVV 120
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 Length = 170 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 13/101 (12%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 452 RTAKVTDLSGIKQII-QPLVESGAL----------VRRTDEELLKALDSFYVVEREGQII 500
+ + + + + E L VR ++++ +V +G +I
Sbjct: 11 KPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVI 70
Query: 501 ACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLGLCI 539
+ + +G+ P R +G G +L+ +
Sbjct: 71 GWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTL 111
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Length = 396 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 6e-05
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 486 ALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLL 535
L++F V+ RE ++ A+ P + +AA+G++PE RG G L+
Sbjct: 46 GLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALI 101
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 6e-05
Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 500
R A V DLSGI +I V + V E + V +G++
Sbjct: 8 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVA 67
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A+ + + G E + + V + RG G G +L+
Sbjct: 68 GYASYGDW-RAFDGYRHTREHS-VYVHKDARGHGIGKRLM 105
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 7e-05
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 16/104 (15%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-----------YVVEREGQII 500
R A DL + ++ V R + + +F V +I+
Sbjct: 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 67
Query: 501 ACAALF-----PFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + + + RGQG G +L+ I
Sbjct: 68 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAI 111
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} Length = 172 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 10/94 (10%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAAL 505
R A D + + Q++ +EL L + V+ A L
Sbjct: 26 RRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVL 85
Query: 506 FP----FFKEKCGEVAAIGVSPECRGQGQGDKLL 535
++ + + V P RG G LL
Sbjct: 86 SFRPNVWYPGPVAILDELYVRPGRRGHRLGSALL 119
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* Length = 177 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 8e-05
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 33/131 (25%)
Query: 471 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK---CGEVAAIGVSPECRG 527
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 45 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 104
Query: 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTAD--- 584
+G G +L+ D +E+ A +L L T
Sbjct: 105 RGLGRQLM-------------------------DEVEQVAVKHKRGLLH-LDTEAGSVAE 138
Query: 585 -WFKSRGFREC 594
++ + +
Sbjct: 139 AFYSALAYTRV 149
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} Length = 143 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
A + DL I I ++ + + RR + +V+ + I F +
Sbjct: 6 TKASIDDLDSIVHIDIDVIGNDS--RRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFD 63
Query: 512 KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
C ++ I VSP R +G LL +
Sbjct: 64 -CTFLSLIIVSPTKRRRGYASSLLSYML 90
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} Length = 187 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 9e-05
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+E + K Y+ QII L + + I V + R G G +L+
Sbjct: 68 NEYINKPNQIIYIALLHNQIIGFIVLKKNW-NNYAYIEDITVDKKYRTLGVGKRLIAQAK 126
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A Length = 160 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 28/171 (16%), Positives = 50/171 (29%), Gaps = 49/171 (28%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------------VV 493
R + DL + + ++ L G + + +L+K + V
Sbjct: 11 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 70
Query: 494 EREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
+R + A + K CG + I V+ + +GQG G L+
Sbjct: 71 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLI------------- 117
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 598
D + G + L F + GF +EM
Sbjct: 118 ------------DQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVEM 156
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Length = 254 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
V Q + + +K E+ GV E + QG G ++
Sbjct: 157 SSYNLDDIERLVAYVNHQPVGIVDII--MTDKTIEIDGFGVLEEFQHQGIGSEIQ 209
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Length = 149 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 40/162 (24%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS--------FYVVEREGQIIAC 502
R +++D G +++ L +G++ + + + S E G+I A
Sbjct: 8 RKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAAT 67
Query: 503 AAL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557
++ F K G + + V RG+ G K++
Sbjct: 68 GSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVV---------------------- 105
Query: 558 FLRDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 598
+++ S+G + L + F + G SI+M
Sbjct: 106 ---EFLMDHCKSMGCYKVILDCSVENKVFYEKCGMSNKSIQM 144
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Length = 144 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKALDS-FYVVEREGQIIACAALFPF 508
R + D + + + E + S F V E G+++
Sbjct: 7 RVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGYD 66
Query: 509 FKEKCGEVAAIGVSPECRGQGQGDKLL 535
G +GV PE RG+G + LL
Sbjct: 67 GHR--GSAYYLGVHPEFRGRGIANALL 91
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 18/100 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVVERE-GQII 500
R A+ DL + I + S T E+ ++ YV E E G +
Sbjct: 6 RLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVA 65
Query: 501 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLL 535
A + F + EV+ I + CRG+G G LL
Sbjct: 66 AWISFETF-YGRPAYNKTAEVS-IYIDEACRGKGVGSYLL 103
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 16/111 (14%)
Query: 439 MGTMVASDLYEGTRTAKVTDLSGIKQIIQ------PLVESGALVRRTDEELLKALDS--- 489
+G + T + ++ + V + + + + L L S
Sbjct: 19 LGGSSMGIIR--TCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTF 76
Query: 490 -FYVVEREGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLL 535
+ ++ A + K + + VS E R QG L+
Sbjct: 77 IALAAFDQEAVVGALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALI 127
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} Length = 179 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 34/134 (25%)
Query: 452 RTAKVTDLSGIKQIIQ----PLVESG------ALVRRTDEELLKALDS--FYVVEREGQI 499
R A TD I ++ L ESG L + + ++ + E E
Sbjct: 17 RFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGA 76
Query: 500 IACAALF-------------PFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSET 546
+A A + +K + I VS G +++
Sbjct: 77 LAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAE------- 129
Query: 547 RYDHISTNGFPFLR 560
PF+R
Sbjct: 130 --KLGIEMSVPFIR 141
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 400 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 3e-04
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 6/54 (11%)
Query: 488 DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLL 535
Y + Q+ + PF + + + PE RG+G ++
Sbjct: 47 TQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIM 100
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} Length = 163 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Query: 452 RTAKVTDLSGIKQII--------QPLVESGAL-----VRRTDEELLKALDS--FYVVERE 496
R A +D I+ + Q L+ S E L + + F V+E+
Sbjct: 9 RKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQA 68
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
++I A ++ E+AA + PE +G G +LL + +
Sbjct: 69 DKVIGFANFIEL-EKGKSELAAFYLLPEVTQRGLGTELLEVGM 110
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} Length = 168 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 18/98 (18%)
Query: 452 RTAKVTDLSGIKQIIQ-PLVES---GALVRRTDEELLKALDSFYVVEREGQII------- 500
R A++ D+ I +I + L E+ V E L + +F+V + ++
Sbjct: 16 RNARMDDIDQIIKINRLTLPENYPYYFFV----EHLKEYGLAFFVAIVDNSVVGYIMPRI 71
Query: 501 ---ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
+ G V +I V E R +G LL
Sbjct: 72 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLL 109
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} Length = 160 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
Query: 452 RTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKALDS----FYVVEREGQIIA 501
R A D I Q+ L + L R T+E+ K + ++ E +G+++
Sbjct: 8 RKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVG 67
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
A+L GE + + V R G G L+ I
Sbjct: 68 EASLHK-----DGEFS-LVVHRNYRTLGIGTLLVKTLI 99
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 3e-04
Identities = 9/100 (9%), Positives = 29/100 (29%), Gaps = 12/100 (12%)
Query: 452 RTAKVTDLSGIKQIIQ-----------PLVESGALVRRTDEELLKALDSFYVVEREGQII 500
D + ++ L +VR + +++ + +
Sbjct: 15 APVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPV 74
Query: 501 ACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ E + ++ + + + +G+G G + L
Sbjct: 75 GYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFA 114
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Length = 176 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 12/96 (12%)
Query: 452 RTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKALDS--FYVVEREGQIIACA 503
RTA + D+ + +++ + R + LL D +++ + +
Sbjct: 27 RTAHIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYI 86
Query: 504 ALFPFF-KEKCGEVA---AIGVSPECRGQGQGDKLL 535
L F E G V P RG+G G L
Sbjct: 87 VLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAAL 122
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 13/77 (16%), Positives = 29/77 (37%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S V+ + ++ PF K + E+ +S + +G G L+ + + +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108
Query: 549 DHISTNGFPFLRDYIEK 565
+ T + Y +K
Sbjct: 109 KYFLTYADNYAIGYFKK 125
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} Length = 276 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 6e-04
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 511
+ A L+ + + L + +G+++A F +
Sbjct: 144 QIAGTEQLTAFVTFAAANIGAPEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQY 203
Query: 512 KCGEVAAIG--VSPECRGQGQGDKLLGLCI 539
+ E A +G V+ RGQG K+L
Sbjct: 204 Q-TEYADLGMIVAQSNRGQGIAKKVLTFLT 232
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 6e-04
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 29/138 (21%)
Query: 462 IKQIIQPLVESGALVRRTDEELLKALDS---FYVVEREGQIIACAALFPFFKEKCGEVAA 518
+ + +G + +T E K L + + + ++I + ++
Sbjct: 11 CEDYCALRINAG-MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGDG-GTVFQIVD 68
Query: 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLL 578
I V +GQ G ++ + +I + + L+
Sbjct: 69 IAVLKSYQGQAYGSLIMEHIM---------KYIKNVSVESVY--------------VSLI 105
Query: 579 TTRTADWF-KSRGFRECS 595
AD GF
Sbjct: 106 ADYPADKLYVKFGFMPTE 123
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 7e-04
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + E I+ P ++ + G+ RG+G + L
Sbjct: 63 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALD 114
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 7e-04
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 490 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + E I+ P ++ + G+ RG+G + L
Sbjct: 87 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALD 138
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Length = 160 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 9e-04
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 481 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + ++ A A E + I V P+ + +G G LL I
Sbjct: 33 FGNQGERYLNLKLTADDRMAAFAITQVVLDE--ATLFNIAVDPDFQRRGLGRMLLEHLI 89
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 634 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 100.0 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 100.0 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 100.0 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 100.0 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 100.0 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 100.0 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 100.0 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 100.0 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 100.0 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 100.0 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 100.0 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 100.0 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 100.0 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 100.0 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 100.0 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 100.0 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 100.0 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 100.0 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 100.0 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 100.0 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 100.0 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 100.0 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 99.97 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.97 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.97 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.96 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.96 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.96 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.96 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.96 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.96 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.95 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.95 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 99.95 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.95 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.94 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.94 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.93 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 99.88 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.87 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 99.8 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 99.7 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 99.69 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 99.63 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 99.63 | |
| 4h89_A | 173 | GCN5-related N-acetyltransferase; N-acyltransferas | 99.62 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 99.62 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 99.61 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 99.61 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 99.6 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 99.59 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 99.59 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 99.59 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 99.59 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 99.58 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 99.58 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 99.58 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 99.57 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 99.57 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 99.57 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 99.57 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 99.57 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 99.57 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 99.56 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 99.56 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 99.56 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 99.56 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 99.55 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 99.55 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 99.55 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 99.55 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 99.55 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 99.54 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 99.54 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 99.54 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 99.54 | |
| 4fd4_A | 217 | Arylalkylamine N-acetyltransferase like 5B; GNAT; | 99.53 | |
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 99.53 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 99.53 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 99.53 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 99.53 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 99.52 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 99.52 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 99.52 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 99.52 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 99.52 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 99.52 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 99.51 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 99.51 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 99.51 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 99.51 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 99.51 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 99.51 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 99.51 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 99.5 | |
| 1xeb_A | 150 | Hypothetical protein PA0115; midwest center for st | 99.5 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 99.5 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 99.5 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 99.49 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 99.49 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 99.49 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 99.49 | |
| 2jdc_A | 146 | Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1. | 99.49 | |
| 3owc_A | 188 | Probable acetyltransferase; structural genomics, P | 99.48 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 99.48 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 99.47 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 99.47 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 99.47 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 99.47 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 99.47 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 99.47 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 99.47 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 99.46 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 99.45 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 99.45 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 99.45 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 99.45 | |
| 3fbu_A | 168 | Acetyltransferase, GNAT family; structur genomics, | 99.45 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 99.45 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 99.45 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 99.45 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 99.44 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 99.44 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 99.43 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 99.43 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 99.42 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 99.42 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 99.41 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 99.41 | |
| 2fl4_A | 149 | Spermine/spermidine acetyltransferase; structural | 99.41 | |
| 3igr_A | 184 | Ribosomal-protein-S5-alanine N-acetyltransferase; | 99.41 | |
| 2vi7_A | 177 | Acetyltransferase PA1377; GNAT, GCN5 family, N-ace | 99.41 | |
| 2bue_A | 202 | AAC(6')-IB; GNAT, transferase, aminoglycoside, flu | 99.41 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 99.39 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 99.39 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 99.39 | |
| 4fd5_A | 222 | Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A | 99.39 | |
| 3te4_A | 215 | GH12636P, dopamine N acetyltransferase, isoform A; | 99.38 | |
| 3tth_A | 170 | Spermidine N1-acetyltransferase; central intermedi | 99.38 | |
| 3eo4_A | 164 | Uncharacterized protein MJ1062; APC60792.2,MJ_1062 | 99.38 | |
| 1s7k_A | 182 | Acetyl transferase; GNAT; 1.80A {Salmonella typhim | 99.38 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 99.38 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 99.37 | |
| 3r9f_A | 188 | MCCE protein; microcin C7, acetyltransferase, SELF | 99.37 | |
| 3eg7_A | 176 | Spermidine N1-acetyltransferase; structural genomi | 99.37 | |
| 3f5b_A | 182 | Aminoglycoside N(6')acetyltransferase; APC60744, l | 99.37 | |
| 3juw_A | 175 | Probable GNAT-family acetyltransferase; structural | 99.36 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 99.36 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 99.36 | |
| 2qec_A | 204 | Histone acetyltransferase HPA2 and related acetylt | 99.36 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 99.36 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 99.35 | |
| 2fsr_A | 195 | Acetyltransferase; alpha-beta-sandwich, structural | 99.35 | |
| 2k5t_A | 128 | Uncharacterized protein YHHK; N-acetyl transferase | 99.34 | |
| 1nsl_A | 184 | Probable acetyltransferase; structural genomics, h | 99.34 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 99.33 | |
| 1yre_A | 197 | Hypothetical protein PA3270; APC5563, midwest cent | 99.32 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 99.32 | |
| 2d4p_A | 141 | Hypothetical protein TTHA1254; structural genomics | 99.31 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 99.3 | |
| 3pzj_A | 209 | Probable acetyltransferases; MCSG, PSI-2, structur | 99.28 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 99.28 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 99.27 | |
| 2fck_A | 181 | Ribosomal-protein-serine acetyltransferase, putat; | 99.27 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.26 | |
| 2vzy_A | 218 | RV0802C; transferase, GCN5-related N-acetyltransfe | 99.25 | |
| 2z10_A | 194 | Ribosomal-protein-alanine acetyltransferase; alpha | 99.25 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 99.23 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 99.22 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.21 | |
| 2qml_A | 198 | BH2621 protein; structural genomics, joint center | 99.21 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 99.2 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 99.19 | |
| 1yk3_A | 210 | Hypothetical protein RV1347C/MT1389; acyltransfera | 99.19 | |
| 2g0b_A | 198 | FEEM; N-acyl transferase, environmental DNA, prote | 99.19 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 99.19 | |
| 4fd7_A | 238 | Putative arylalkylamine N-acetyltransferase 7; GNA | 99.19 | |
| 2pr1_A | 163 | Uncharacterized N-acetyltransferase YLBP; YIBP pro | 99.18 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 99.18 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 99.18 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.17 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 99.17 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 99.15 | |
| 4ava_A | 333 | Lysine acetyltransferase; allosteric regulation, d | 99.15 | |
| 3tcv_A | 246 | GCN5-related N-acetyltransferase; GRAM negative co | 99.15 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 99.15 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.06 | |
| 2q04_A | 211 | Acetoin utilization protein; ZP_00540088.1, struct | 99.03 | |
| 1r57_A | 102 | Conserved hypothetical protein; GCN5, N-acetyltran | 99.01 | |
| 3g3s_A | 249 | GCN5-related N-acetyltransferase; ZP_00874857.1, a | 98.96 | |
| 2zw5_A | 301 | Bleomycin acetyltransferase; dimer, two domains; H | 98.96 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 98.96 | |
| 2ft0_A | 235 | TDP-fucosamine acetyltransferase; GNAT fold acetyl | 98.86 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 98.86 | |
| 2zpa_A | 671 | Uncharacterized protein YPFI; RNA modification enz | 98.77 | |
| 1ro5_A | 201 | Autoinducer synthesis protein LASI; alpha-beta-alp | 98.57 | |
| 3p2h_A | 201 | AHL synthase; acyl-ACP binding, SAM binding, signa | 98.32 | |
| 1xmt_A | 103 | Putative acetyltransferase; structural genomics, p | 98.32 | |
| 1yle_A | 342 | Arginine N-succinyltransferase, alpha chain; struc | 98.18 | |
| 1bob_A | 320 | HAT1, histone acetyltransferase; histone modificat | 98.11 | |
| 1kzf_A | 230 | Acyl-homoserinelactone synthase ESAI; alpha-beta, | 97.96 | |
| 3shp_A | 176 | Putative acetyltransferase STHE_0691; PSI-biology, | 97.91 | |
| 3dns_A | 135 | Ribosomal-protein-alanine acetyltransferase; N-ter | 97.37 | |
| 2p0w_A | 324 | Histone acetyltransferase type B catalytic subuni; | 93.33 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 91.35 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 89.6 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 88.54 | |
| 4hkf_A | 191 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 85.91 | |
| 3gkr_A | 336 | FEMX; FEMX, peptidoglycan, hexapeptide, transferas | 85.39 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 85.34 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 84.05 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 84.0 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 83.7 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 82.7 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 82.54 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-71 Score=611.19 Aligned_cols=429 Identities=36% Similarity=0.594 Sum_probs=391.6
Q ss_pred HHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCc
Q 006709 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160 (634)
Q Consensus 81 ~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~ 160 (634)
.+|+++||+|+|||++||++++|||+||++|+++++..++++|+.|++.|++||||||||++++.+++++++++++.+|.
T Consensus 25 ~~~~~~~~~~~~yi~~~~~~~iViK~GG~~l~~~~~~~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~~~~~~~~g~ 104 (456)
T 3d2m_A 25 DSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGL 104 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEECGGGGTSTHHHHHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTTCCCCCGGGC
T ss_pred hHHHHHHHHhHHHHHHhcCCEEEEEEChHHhcCchHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCCCCCEeeCCe
Confidence 57999999999999999999999999999999877999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEec
Q 006709 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (634)
Q Consensus 161 RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd 240 (634)
|+|++++|+.+.+++|++|..++++ |+ +|++....++++++.|++|+++++.++.+++|++++|+|+.+|
T Consensus 105 r~t~~~~l~~~~~~~G~~~~~l~~~---------l~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~ 174 (456)
T 3d2m_A 105 RVTDETSLGQAQQFAGTVRSRFEAA---------LC-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTD 174 (456)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHH---------HH-TC--------CCCEECCSCEEEEECCEETTEECBTBEEEEEEC
T ss_pred ecCCHHHHHHHHHHHhHHHHHHHHH---------Hh-cccccCCCccceeeccCcEEEEEEcccccCcccCceeeEEEEC
Confidence 9999999999855569999988886 45 7776322348999999999999998887888999999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHHHHHHHhh
Q 006709 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 241 ~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~~~li~~~ 319 (634)
.+.|+.||++|.|||++|++.+.+|+++|+|+|++|+++|.+|+||+|||+|||||+. .++++|++++.+|+++++..
T Consensus 175 ~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~~~~~i~~i~~~e~~~~~~~- 253 (456)
T 3d2m_A 175 TAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEH- 253 (456)
T ss_dssp HHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCTTSCBCSEEEHHHHHHHHTT-
T ss_pred HHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCCCCCccccCCHHHHHHHHhc-
Confidence 9999999999999999999999999999999999999999999999999999999974 57999999999988877531
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
| +||
T Consensus 254 ----------------------------------------------------------g---------~gg--------- 257 (456)
T 3d2m_A 254 ----------------------------------------------------------A---------ASE--------- 257 (456)
T ss_dssp ----------------------------------------------------------C---------CHH---------
T ss_pred ----------------------------------------------------------c---------CCC---------
Confidence 1 145
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHHHcccCccCC
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT 479 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~ 479 (634)
|.+||+||..|++.|+++++|+|++.++.|+.++|++++.||+|.++.|..||+++++|++.+.+++..+....+..+++
T Consensus 258 m~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~ 337 (456)
T 3d2m_A 258 TRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRS 337 (456)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCCCCEEEECCGGGHHHHHHHHHHHHHHTSSCCCC
T ss_pred hHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeecccceeeCCCCHHHHHHHHHHHHHHHhcCCCccCC
Confidence 99999999999999999999999999999889999999999999999999999999999999999998877777777888
Q ss_pred HHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcch
Q 006709 480 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFL 559 (634)
Q Consensus 480 ~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~ 559 (634)
.+.+.+.+..+++++.+|++|||+.+.+......++|..++|+|+|||||+|++|+
T Consensus 338 ~~~~~~~l~~~~va~~~g~iVG~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll------------------------ 393 (456)
T 3d2m_A 338 REYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLL------------------------ 393 (456)
T ss_dssp HHHHHHHGGGEEEEEETTEEEEEEEEEECSSTTEEEEEEEEECGGGTTSSHHHHHH------------------------
T ss_pred HHHHHHHHhhEEEEEECCEEEEEEEEEecCCCCEEEEEEEEECHHHcCCCHHHHHH------------------------
Confidence 99999888899999999999999999976566789999999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhhccCC-CCceEEEeecC
Q 006709 560 RDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKLL 621 (634)
Q Consensus 560 ~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~-~~s~~~~k~l~ 621 (634)
+++++++++.|++.+++.++++.+||+++||+..+...+|..++..|++. +++++|+|.|+
T Consensus 394 -~~~~~~a~~~g~~~i~l~N~~a~~fY~k~GF~~~~~~~~p~~~~~~y~~~~r~~~v~~k~L~ 455 (456)
T 3d2m_A 394 -AHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLH 455 (456)
T ss_dssp -HHHHHHHHHTTCCEEEEEESSCHHHHHTTTCEEECGGGSCHHHHHHHHHHCCCCEEEEEECC
T ss_pred -HHHHHHHHHcCCCEEEEEcHHHHHHHHHCCCEEeCcccCCHHHHhhcccccCCeEEEEEEcC
Confidence 99999999999999999888899999999999999999999999999999 99999999985
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-56 Score=490.03 Aligned_cols=366 Identities=20% Similarity=0.277 Sum_probs=316.0
Q ss_pred HHHHhhhHHHhhcC----CeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 006709 86 WFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (634)
Q Consensus 86 ~~r~a~pYi~~~r~----k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~R 161 (634)
.+||++|||++|++ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|
T Consensus 41 ~~re~~pyi~~f~~~~~~~~iViK~GGsv~~~-~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~R 119 (460)
T 3s6g_A 41 DGKEIREYLHRFSGIDQERFAVIKVGGAVIQD-DLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLR 119 (460)
T ss_dssp THHHHHHHHHHTSSSCGGGSEEEEECHHHHHH-CHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSC
T ss_pred CHHHHHHHHHHHhCCCCCCEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCcc
Confidence 46799999999998 89999999998875 48999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH
Q 006709 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (634)
Q Consensus 162 vT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~ 241 (634)
+|++++|+++.++.+++|..|+++ |+++|++ ++++++ + .+++++ +++.|+|++|+|+.+|.
T Consensus 120 vTd~~~l~vv~~~lg~vn~~lv~a---------L~~~G~~----Av~lsg--~-~~~a~~---~~~~d~g~~G~I~~v~~ 180 (460)
T 3s6g_A 120 VTRDEAMPIIRDTLTQANLALVDA---------IRDAGGR----AAAVPR--G-VFEADI---VDADKLGRVGEPRHIHL 180 (460)
T ss_dssp CBCTTTHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS--S-SEEEEE---SCTTTTBSEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEec--C-eEEEEE---ecCcccCccCcceEEcH
Confidence 999999999866668999999886 6889998 888775 3 446664 46789999999999999
Q ss_pred HHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCHH-HHHHHHHhh
Q 006709 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQ-EADSLIRQR 319 (634)
Q Consensus 242 ~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~~-e~~~li~~~ 319 (634)
+.|+.+|++|.|||++|++.+.+|+++|+|+|.+|+++|.+|+||+|||+|||+|+ ++++++|++++.. |++.++..+
T Consensus 181 ~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~ 260 (460)
T 3s6g_A 181 DLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQAD 260 (460)
T ss_dssp HHHHHHHHTTCEEEEECEEECTTCCEEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCTTSSBCCEEEHHHHHHHHHHCS
T ss_pred HHHHHHHHCCcEEEEECceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCeecceeCcHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999997 5789999999986 777775421
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
+.+||
T Consensus 261 ------------------------------------------------------------------~~tGG--------- 265 (460)
T 3s6g_A 261 ------------------------------------------------------------------WVNGG--------- 265 (460)
T ss_dssp ------------------------------------------------------------------SSCHH---------
T ss_pred ------------------------------------------------------------------CCCCc---------
Confidence 23466
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCcc---chHHHHHHhHHHHHHcccCc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALV 476 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~---~D~~~i~~l~~~~~~~~~~~ 476 (634)
|.+||+||..+++ |+++++|++++.+++|+.+||+++++||+|.++ +.+|.++. .|++.|.++++++.. +.++
T Consensus 266 M~~Kl~aa~~a~~-gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv 341 (460)
T 3s6g_A 266 MRLKLEEIKRLLD-DLPLSSSVSITRPSELARELFTHAGSGTLIRRG--ERMVATDDKSSLDLGRLDNLVKAAFG-RPAV 341 (460)
T ss_dssp HHHHHHHHHHHHH-TSCTTCEEEEECGGGHHHHHHSSCCSSEEEECC--CCEEEESCGGGSCHHHHHHHHHHHSS-SCBC
T ss_pred HHHHHHHHHHHHh-CCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcC--CceEEeccCCcCCHHHHHHHHHHHcC-cccH
Confidence 9999999988876 676799999999999999999999999999988 78899888 999999999998776 6555
Q ss_pred cCCHHHHH-hhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCC
Q 006709 477 RRTDEELL-KALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNG 555 (634)
Q Consensus 477 ~~~~~~~~-~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~ 555 (634)
+ +++. ..+..|||.+.++ |. +.+++.+..+||++++|+|+|||.|+|+.|+
T Consensus 342 ~---~~le~~~i~~~~v~e~~~---aa--aiv~~~~~~aeL~kfaV~~~~~g~g~gd~l~-------------------- 393 (460)
T 3s6g_A 342 E---GYWDRLRVDRAFVTESYR---AA--AITTRLDGWVYLDKFAVLDDARGEGLGRTVW-------------------- 393 (460)
T ss_dssp T---THHHHCCCSEEEEETTSS---EE--EEEEEETTEEEEEEEEECHHHHHHTHHHHHH--------------------
T ss_pred H---HHHhhcCcceEEEecCCC---EE--EEEecCCCCeEEEEEEEChhhhcCCHHHHHH--------------------
Confidence 3 4444 4567899998887 33 3334457899999999999999999999999
Q ss_pred CcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHh
Q 006709 556 FPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKS 588 (634)
Q Consensus 556 ~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k 588 (634)
+++++.+ ..+++.+ ..-..||-+
T Consensus 394 -----~~i~~~~-----~~L~Wrsr~~n~~~~Wyf~ 419 (460)
T 3s6g_A 394 -----NRMVDYA-----PQLIWRSRTNNPVNGFYFE 419 (460)
T ss_dssp -----HHHHHHC-----SSEEEEEETTCTTHHHHHH
T ss_pred -----HHHHHhC-----CceEEEeCCCCCccceEEe
Confidence 7777764 4477766 356788753
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-52 Score=454.92 Aligned_cols=372 Identities=20% Similarity=0.287 Sum_probs=298.7
Q ss_pred HHHHHhhhHHHhhcC----CeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCc
Q 006709 85 KWFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRY 160 (634)
Q Consensus 85 ~~~r~a~pYi~~~r~----k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~ 160 (634)
...||+.|||++||+ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+
T Consensus 30 ~~~re~~~yl~~F~~~~~~~~iVIK~GGsv~~~-~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~ 108 (464)
T 4ab7_A 30 STKREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGI 108 (464)
T ss_dssp -------------------CCEEEEECHHHHHH-CHHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETTE
T ss_pred CChhhHHHHHHHHhCCCCCceEEEEECHHHhhc-hHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCe
Confidence 345667777777776 89999999999875 4899999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEec
Q 006709 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD 240 (634)
Q Consensus 161 RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd 240 (634)
|+|++++|+++.++++++|..|+++ |+++|++ ++++++ +++++++ .+++|+|++|+|+.+|
T Consensus 109 RvTd~~tl~vv~mv~~~vn~~lv~~---------L~~~G~~----Avglsg---g~~~a~~---~~~~d~g~vG~I~~v~ 169 (464)
T 4ab7_A 109 RITDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVT 169 (464)
T ss_dssp ECBCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCTTTTBSBEEEEEEC
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eEEECC---CcEEEEe---cCccccCCcCcccccC
Confidence 9999999999966678999999886 6889998 888874 5667776 4678999999999999
Q ss_pred HHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC--CCCccccccCHHH-HHHHHH
Q 006709 241 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIR 317 (634)
Q Consensus 241 ~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld--~~gklI~~ls~~e-~~~li~ 317 (634)
.+.|+.+|++|.|||++|++.+.+|+++|+|+|.+|++||.+|+||+|||+|||+|+. +++++|++++.+| ++.++.
T Consensus 170 ~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~~~~~lI~~it~~e~~~~li~ 249 (464)
T 4ab7_A 170 KEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMK 249 (464)
T ss_dssp CHHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHHHHHHHHCCSEEEEEESSCSEECTTTCCEECEEEHHHHHHHHHT
T ss_pred HHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHHHHHHHcCCCEEEEEecccccccCCCCcCCcccCHHHHHHHHHh
Confidence 9999999999999999999998899999999999999999999999999999999973 4799999999875 566653
Q ss_pred hhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccc
Q 006709 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (634)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~ 397 (634)
++ +.+||
T Consensus 250 ~~------------------------------------------------------------------~~tgG------- 256 (464)
T 4ab7_A 250 QS------------------------------------------------------------------WVKYG------- 256 (464)
T ss_dssp CS------------------------------------------------------------------SCCHH-------
T ss_pred cC------------------------------------------------------------------CCCCc-------
Confidence 21 23466
Q ss_pred cCCHHHHHHHHHHHHc---CCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCccchHHHHHHhHHHHHHcc-
Q 006709 398 NGYLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG- 473 (634)
Q Consensus 398 ~~m~~Kl~AA~~a~~~---Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~- 473 (634)
|.+||+||..|++. | ..++|++ ++.++.|+|+++++||+|.++ |+.+|.++.+|++.+..|.+.+..+.
T Consensus 257 --M~pKl~aa~aa~~~v~~g-~~v~I~~---~~~ll~eLft~~g~GT~I~~~-~~~~r~a~~~dv~~~~~L~~lL~~s~~ 329 (464)
T 4ab7_A 257 --TKLKIREIKELLDYLPRS-SSVAIIN---VQDLQKELFTDSGAGTMIRRG-YKLVKRSSIGEFPSADALRKALQRDAG 329 (464)
T ss_dssp --HHHHHHHHHHHHTTSCTT-CEEEEEE---STTHHHHTTSSSTTSEEEECC-CCCEEESSGGGSSCHHHHHHHHTTSTT
T ss_pred --HHHHHHHHHHHHHhcccC-cEEEEec---ChHHHHHHhcCCCCceEEecC-ccccccCChhhhcCHHHHHHHHHhccc
Confidence 99999965555443 5 4689998 677899999999999999999 99999999999888777776666542
Q ss_pred -cCccCCHHHHHhhc-CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccc
Q 006709 474 -ALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (634)
Q Consensus 474 -~~~~~~~~~~~~~l-~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~ 551 (634)
.....+.+.+.+.+ ...+.+..++..-|++.+. .....+++..++|.|+.||.|+++.++
T Consensus 330 ~~~~~~~v~~y~~~L~~~~~~iy~d~~y~~~AIv~--~~~~~~~LdkFav~~~~~~~gv~d~vf---------------- 391 (464)
T 4ab7_A 330 ISSGKESVASYLRYLENSDFVSYADEPLEAVAIVK--KDTNVPTLDKFVCSDAAWLNNVTDNVF---------------- 391 (464)
T ss_dssp TSSSSSCHHHHHHHHHTSCEEEEECTTCSEEEEEE--CSSSSCEEEEEEECHHHHHTTHHHHHH----------------
T ss_pred ccchhhhHHHHHHHhhcCceEEEEeCCceEEEEEe--cCCCCEEEEEEEEcccccccCHHHHHH----------------
Confidence 12233566666665 2334555677788888886 356789999999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHh
Q 006709 552 STNGFPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKS 588 (634)
Q Consensus 552 ~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k 588 (634)
+.+.+.+ ..|++.+ .+...||-+
T Consensus 392 ---------~~i~~d~-----~~L~Wrsr~~n~~~~Wyf~ 417 (464)
T 4ab7_A 392 ---------NVLRRDF-----PALQWVVSENDANIAWHFD 417 (464)
T ss_dssp ---------HHHHHHC-----SSEEEEEETTCTTHHHHHH
T ss_pred ---------HHHHhhC-----CceEEEeCCCCCccceEEe
Confidence 7777765 3567666 356788753
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-54 Score=473.48 Aligned_cols=371 Identities=22% Similarity=0.320 Sum_probs=311.8
Q ss_pred HHHHhhhHHHhhcC----CeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 006709 86 WFREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (634)
Q Consensus 86 ~~r~a~pYi~~~r~----k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~R 161 (634)
.+||+.|||++|++ +++|||+||+++++ .+++++++|+.|+..|+++|||||||++++..++++|++++|++|+|
T Consensus 44 ~~re~~pyi~~f~~~~~~~~iViK~GG~v~~~-~l~~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~R 122 (467)
T 3s6k_A 44 SAKEISQYLKRFSQLDAKRFAVVKVGGAVLRD-DLEALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLR 122 (467)
T ss_dssp THHHHHHHHHSSSSSCSTTSCCCCCCHHHHTT-CCHHHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSC
T ss_pred CHHHHHHHHHHHhCCCCCcEEEEEEChHHhhh-HHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCcc
Confidence 35699999999998 89999999998775 48999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH
Q 006709 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (634)
Q Consensus 162 vT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~ 241 (634)
+|++++|+++.++.+++|..|+++ |+++|++ ++++++ +.++++ +.++.|+|++|+|+.+|.
T Consensus 123 vTd~~~l~vv~~~~g~vn~~Lv~a---------L~~~G~~----Av~lsg---~~~~a~---~~~~~d~g~~G~I~~v~~ 183 (467)
T 3s6k_A 123 VTSPHALAIVRKVFQASNLKLVEA---------LQQNGAR----ATSITG---GVFEAE---YLNRDTYGLVGEVKAVNL 183 (467)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHH---------HHHHTCC----BCCCCS---SSBCCC---BSCSSSSBSBBCCCCBCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----ceEEcC---ccEEEE---eccCcccCccceEEEEcH
Confidence 999999999866668999999886 5889988 677664 344554 356789999999999999
Q ss_pred HHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCHH-HHHHHHHhh
Q 006709 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQ-EADSLIRQR 319 (634)
Q Consensus 242 ~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~~-e~~~li~~~ 319 (634)
+.|+.+|++|.|||++|++.+.+|+++|+|+|.+|++||.+|+||+|||+|||+|+ ++++++|++++.. |++.++..+
T Consensus 184 ~~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~ 263 (467)
T 3s6k_A 184 APIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQP 263 (467)
T ss_dssp HHHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCSSCCCCCCCCTTTTTHHHHTSS
T ss_pred HHHHHHHHCCCEEEEECceECCCCcEEecCHHHHHHHHHHhcCCCEEEEEecccceeCCCCCCccccChHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999997 5689999999985 666665311
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
+.+||
T Consensus 264 ------------------------------------------------------------------~~tGG--------- 268 (467)
T 3s6k_A 264 ------------------------------------------------------------------WINGG--------- 268 (467)
T ss_dssp ------------------------------------------------------------------SCCSH---------
T ss_pred ------------------------------------------------------------------CCCCc---------
Confidence 23566
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccccccCcc---chHHHHHHhHHHHHHcccCc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALV 476 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~iR~a~~---~D~~~i~~l~~~~~~~~~~~ 476 (634)
|.+||+||..+++ |++++++++++.+++|+.+||+++++||+|.++ +.+|.++. .|++.|.++++++.. +.++
T Consensus 269 M~~Kl~aa~~a~~-gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv 344 (467)
T 3s6k_A 269 MRVKIEQIKDLLD-RLPLESSVSITRPADLAKELFTHKGSGTLVRRG--ERVLRATSWDELDLPRLTSLIESSFG-RTLV 344 (467)
T ss_dssp HHHHHHHHHHHHT-TSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCC--CCEEEESSTTSSCHHHHHHHHHHHSS-SCCC
T ss_pred hHHHHHHHHHHHh-CCCcEEEEEeCCchHHHHHHhcCCCcceEEeCC--CceEEccccCcCCHHHHHHHHHHhhc-cchH
Confidence 9999999888776 676799999999999999999999999999988 77888887 899999999998766 5444
Q ss_pred cCCHHHHH-hhcCcEEEEEECCeEEEEEEEeee---cCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccc
Q 006709 477 RRTDEELL-KALDSFYVVEREGQIIACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (634)
Q Consensus 477 ~~~~~~~~-~~l~~~~V~~~~g~iiG~~~l~~~---~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~ 552 (634)
+ +++. ..+..||+.+.++ |++.+++- ..+..+|++.++|+|+|||.|+|+.|+
T Consensus 345 ~---~yle~~~i~~~~v~e~~~---aaaiv~~e~~~~~~~~~~L~kfaV~~~~~g~g~~d~l~----------------- 401 (467)
T 3s6k_A 345 P---DYFSNTKLLRAYVSENYR---AAVILTDEGMLGASALIYLDKFAVLDDAQGEGLGRAVW----------------- 401 (467)
T ss_dssp T---TCTTTCCCSEEEEETTSS---CEEEEEEECSSTTCSEEEEEEECCCHHHHTTTSHHHHH-----------------
T ss_pred H---HHHhccCceEEEEecCCc---EEEEEeccccCCCCCCeEEEEEEEchhhhcCCHHHHHH-----------------
Confidence 2 3333 2456888888777 44444432 125789999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHh--CCC
Q 006709 553 TNGFPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGF 591 (634)
Q Consensus 553 ~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k--~GF 591 (634)
+++++. ...|++.+ ..-..||-+ .|+
T Consensus 402 --------~~i~~~-----~p~L~Wrsr~~n~~~~Wyf~rs~G~ 432 (467)
T 3s6k_A 402 --------NVMREE-----TPQLFWRSRHNNQVNIFYYAESDGC 432 (467)
T ss_dssp --------HHHTTT-----CCSEEEEECSSCTTHHHHHHHCSEE
T ss_pred --------HHHHHh-----CCceEEEeCCCCCccceEEeeeeEE
Confidence 666654 34577766 356788753 454
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-49 Score=413.53 Aligned_cols=281 Identities=27% Similarity=0.374 Sum_probs=255.5
Q ss_pred CcchHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc
Q 006709 77 PVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK 155 (634)
Q Consensus 77 ~~~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~ 155 (634)
++.+.+|+++||+|+|||++|+++++|||+||+++++++ ++.++++|+.|++.|+++||||||||+++.++++++++++
T Consensus 3 ~~~~~~~~~~~~~a~pyi~~~~~k~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~ 82 (299)
T 2ap9_A 3 ALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGD 82 (299)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCC
T ss_pred cCChhhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCccc
Confidence 345688999999999999999999999999999999866 7899999999999999999999999999999999999999
Q ss_pred ccCCccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeeccc---ccCcccc
Q 006709 156 YLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYG 231 (634)
Q Consensus 156 ~~~G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~---~~g~d~g 231 (634)
+.+|+|+|+.++++++ ++++|++|..++++ |+++|++ ++++++.|+++++++++++ .+++|+|
T Consensus 83 ~~~g~R~t~~~~l~~~~~~~~G~l~~~l~~~---------L~~~g~~----av~lt~~d~~~~~~~~~~~~~~~~~~d~g 149 (299)
T 2ap9_A 83 FKGGFRVTTPEVLDVARMVLFGQVGRELVNL---------INAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIG 149 (299)
T ss_dssp CSSSSCCBCHHHHHHHHHHHHHTHHHHHHHH---------HTTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCB
T ss_pred ccCCcccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----ceEechhHCCEEEEEecccccccccCCCC
Confidence 9999999999999997 67799999988776 5678887 7999999999999887764 2457999
Q ss_pred ccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC---C-CCcccccc
Q 006709 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFL 307 (634)
Q Consensus 232 ~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld---~-~gklI~~l 307 (634)
|+|+|+.++.+.|+.+|++|.|||++|++.+.+|+.+++|+|.+|+++|.+|+||+|+|+|||||+. | ++++|+++
T Consensus 150 ~~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~~~~~i~~i 229 (299)
T 2ap9_A 150 LVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229 (299)
T ss_dssp SEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEE
T ss_pred cceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCCCCcChhhc
Confidence 9999999999999999999999999999888899999999999999999999999999999999973 3 68999999
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+.+|+++++. |.
T Consensus 230 s~~e~~~l~~--------------------------------------------------------------------~~ 241 (299)
T 2ap9_A 230 DTGTLAQLLP--------------------------------------------------------------------TL 241 (299)
T ss_dssp EHHHHHHHGG--------------------------------------------------------------------GS
T ss_pred CHHHHHHHHH--------------------------------------------------------------------hh
Confidence 9998877642 12
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 447 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~ 447 (634)
+|| |.+|++||..|++.|+++++|+||+.+++||.++|++++.||+|.+++
T Consensus 242 ~gg---------M~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~~ 292 (299)
T 2ap9_A 242 ELG---------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGE 292 (299)
T ss_dssp CTT---------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECCC
T ss_pred cCc---------hHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecCC
Confidence 355 999999999999999999999999999998899999999999998764
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-49 Score=411.01 Aligned_cols=279 Identities=28% Similarity=0.457 Sum_probs=253.6
Q ss_pred hHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 80 ~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
+.+|+++||+|+|||++||++++|||+||+++++++ +..++++|+.|++.|+++||||||||+++..++++++++++.+
T Consensus 7 ~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~ 86 (300)
T 2buf_A 7 AAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFID 86 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSS
T ss_pred hHHHHHHHHHHhHHHHHhcCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccC
Confidence 458999999999999999999999999999999876 7899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccc--c-------Cc
Q 006709 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV--D-------GV 228 (634)
Q Consensus 159 G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~--~-------g~ 228 (634)
|.|+|++++|+.+ ++++|++|+.++++ |+++|++ ++++++.|++|+.+++.+.. + ++
T Consensus 87 g~rvt~~~~l~~~~~~~~G~~~~~l~~~---------l~~~g~~----a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 153 (300)
T 2buf_A 87 GMRVTDAATMDVVEMVLGGQVNKDIVNL---------INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEII 153 (300)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CC
T ss_pred CeecCCHHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----EEEecCCCCCeeeeeeccccccchhhcccccc
Confidence 9999999999997 56679999999886 5789987 89999999999998875432 2 34
Q ss_pred cccccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCcccccc
Q 006709 229 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFL 307 (634)
Q Consensus 229 d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~l 307 (634)
|++++|+|+.+|.+.|+.+|++|.|||++|++.+.+|+.+++|+|.+|+++|.+|+||+|+|+|||||+. .++++|+++
T Consensus 154 d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~~a~~i~~i 233 (300)
T 2buf_A 154 DIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGL 233 (300)
T ss_dssp CCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEE
T ss_pred cCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECCCCcChhhC
Confidence 8999999999999999999999999999999989999999999999999999999999999999999985 469999999
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+.+|+++++..+ ..
T Consensus 234 ~~~e~~~~~~~~------------------------------------------------------------------~~ 247 (300)
T 2buf_A 234 STEQVNELIADG------------------------------------------------------------------TI 247 (300)
T ss_dssp CHHHHHHHHHTT------------------------------------------------------------------CS
T ss_pred CHHHHHHHHHcC------------------------------------------------------------------CC
Confidence 999988876421 12
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
+|| |.+||+||..|+++|+++++|+||..+++||.++|++++.||+|.++
T Consensus 248 ~gg---------M~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 248 YGG---------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp CTT---------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECC
T ss_pred CCc---------cHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeC
Confidence 455 99999999999999999999999999999889999999999999764
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-49 Score=414.95 Aligned_cols=282 Identities=27% Similarity=0.424 Sum_probs=250.5
Q ss_pred CCCCcchHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCC
Q 006709 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGH 152 (634)
Q Consensus 74 ~g~~~~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~ 152 (634)
+|+++.+.+|+++||+|+|||++||++++|||+||+++++++ ++.++++|+.|++.|+++|||||||++++.+++++++
T Consensus 11 ~~~~~~~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~ 90 (298)
T 2rd5_A 11 TGNAPSPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNI 90 (298)
T ss_dssp -------CHHHHHHHHTHHHHHHTTTCEEEEEECTHHHHCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTC
T ss_pred cCCCCChHHHHHHHHHHHHHHHHhcCCEEEEEECchhhCChhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCC
Confidence 577777889999999999999999999999999999999866 7899999999999999999999999999999999999
Q ss_pred cccccCCccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCcccc
Q 006709 153 EAKYLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 231 (634)
Q Consensus 153 ~~~~~~G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g 231 (634)
+.++.+|.|+|++++|+.+ ++++|++|..+++. |+++|++ ++++++.+++++.+++.+ +++|++
T Consensus 91 ~~~~~~g~R~t~~~~l~~~~~~~~G~~n~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~--~~~d~g 155 (298)
T 2rd5_A 91 PAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSL---------INAAGAT----AVGLSGHDGRLLTARPVP--NSAQLG 155 (298)
T ss_dssp CCCEETTEECBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTSC----EEEEETTGGGCEEEEECT--THHHHB
T ss_pred CccccCCcccCCHHHHHHHHHHHhchHHHHHHHH---------HHhCCCC----ccccChHHCCEEEEEeCC--ccccCC
Confidence 9999999999999999997 56679999988775 6889987 899999999999988764 335899
Q ss_pred ccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC---C-CCcccccc
Q 006709 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFL 307 (634)
Q Consensus 232 ~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld---~-~gklI~~l 307 (634)
++|+++.+|.+.|+.+|++|.|||++|++.+..|+.+++|+|.+|+++|.+|+||+|+|+|||||++ | ++++|+++
T Consensus 156 ~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~~a~~i~~i 235 (298)
T 2rd5_A 156 FVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEI 235 (298)
T ss_dssp SEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSCTTSEECEE
T ss_pred cceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCCCCCCcccC
Confidence 9999999999999999999999999999988889999999999999999999999999999999973 2 38999999
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+.+|+++++..+ ..
T Consensus 236 s~~e~~~~~~~g------------------------------------------------------------------~~ 249 (298)
T 2rd5_A 236 DIKGVKKMIEDG------------------------------------------------------------------KV 249 (298)
T ss_dssp EHHHHHHHHHTT------------------------------------------------------------------SS
T ss_pred CHHHHHHHHHCC------------------------------------------------------------------CC
Confidence 999988876421 12
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
+|| |.+|++||..|+++|++++||+||+.++.||.++|++++.||+|.+
T Consensus 250 ~gG---------M~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 250 AGG---------MIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp CTT---------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred CCc---------hHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 455 9999999999999999999999999999987999999999999853
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-49 Score=415.07 Aligned_cols=280 Identities=29% Similarity=0.458 Sum_probs=252.9
Q ss_pred hHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 80 ~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
+.+|+++||+|+|||++||++++|||+||++|++++ ++.++++|+.|++.|+++||||||||+++..+++++++.++.+
T Consensus 30 ~~~~~~~~~~a~pyi~~~~~k~iVIKlGGs~l~~~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~ 109 (321)
T 2v5h_A 30 AADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHN 109 (321)
T ss_dssp CCCHHHHHHHTHHHHHHTTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSS
T ss_pred hhhHHHHHHHHHHHHHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccC
Confidence 347999999999999999999999999999999866 7899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEE
Q 006709 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK 237 (634)
Q Consensus 159 G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~ 237 (634)
|.|+|++.+|+.+ ++++|++|..|+.+ |+++|++ ++++++.+++++.+++.+ +.|++++|+++
T Consensus 110 g~Rvt~~~~l~~~~~~~~G~in~~l~~~---------L~~~g~~----a~gl~~~~a~~l~a~~~~---~~d~g~~g~v~ 173 (321)
T 2v5h_A 110 GLRVTDADTMEVVEMVLVGRVNKDIVSR---------INTTGGR----AVGFCGTDGRLVLARPHD---QEGIGFVGEVN 173 (321)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHHTCC----EEEECTTGGGSEEEEECS---SCSSBSBEEEE
T ss_pred CcccCCHHHHHHHHHHHhChHHHHHHHH---------HHhCCCC----eeeeChhhccEEEeecCC---CccccccceeE
Confidence 9999999999997 66789999988886 5789987 899999999999988764 36899999999
Q ss_pred EecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC---C-CCccccccCHHHHH
Q 006709 238 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEAD 313 (634)
Q Consensus 238 ~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld---~-~gklI~~ls~~e~~ 313 (634)
.+|.+.|+.+|++|.|||++|++.+..|+.+++|+|.+|+++|.+|+||+|+|+|||||++ | ++++|++|+.+|++
T Consensus 174 ~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~~a~~i~~is~~e~~ 253 (321)
T 2v5h_A 174 SVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSR 253 (321)
T ss_dssp EECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCCEEEHHHHH
T ss_pred EecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCCCCeeeeEEcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999973 3 58999999999988
Q ss_pred HHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccc
Q 006709 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (634)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~ 393 (634)
+++..+ +.+||
T Consensus 254 ~l~~~g------------------------------------------------------------------~~~gG--- 264 (321)
T 2v5h_A 254 ELIAQG------------------------------------------------------------------IVGGG--- 264 (321)
T ss_dssp HHHHTT------------------------------------------------------------------SSCTT---
T ss_pred HHHhCC------------------------------------------------------------------CCcCc---
Confidence 876421 12455
Q ss_pred cccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccccc
Q 006709 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG 450 (634)
Q Consensus 394 ~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye~ 450 (634)
|.+|++||..|++.|+++++|+||+.++.||.++|++++.||+|.++.|+.
T Consensus 265 ------M~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~~~~~ 315 (321)
T 2v5h_A 265 ------MIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYHE 315 (321)
T ss_dssp ------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC----
T ss_pred ------HHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECCcccc
Confidence 999999999999999999999999999998899999999999999998864
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=400.46 Aligned_cols=275 Identities=28% Similarity=0.449 Sum_probs=249.6
Q ss_pred HHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 006709 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (634)
Q Consensus 81 ~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G 159 (634)
.+|+++||+|+|||++|+++++|||+||+++++++ +.+++++|+.|++.|+++||||||||+++.+++++++++++.+|
T Consensus 3 ~~~~~~~~~~~pyi~~~~~~~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g 82 (282)
T 2bty_A 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred hHHHHHHHHHHHHHHHhcCCeEEEEECchhhCChhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCC
Confidence 46899999999999999999999999999999876 78999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEE
Q 006709 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (634)
Q Consensus 160 ~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~ 238 (634)
+|+|++.+|+.+ ++++|++|..+++. |+++|++ ++++++.+++++.+++.++ +.|++++|+++.
T Consensus 83 ~r~t~~~~l~~~~~~~~G~~~~~l~~~---------l~~~g~~----a~~l~~~~~~~l~~~~~~~--~~d~g~~g~v~~ 147 (282)
T 2bty_A 83 HRVTDEKTMEIVEMVLVGKINKEIVMN---------LNLHGGR----AVGICGKDSKLIVAEKETK--HGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHTTTCC----EEEEETTGGGSEEEEECCT--TCCCBSBEEEEE
T ss_pred cccCCHHHHHHHHHHHhhHHHHHHHHH---------HHhCCCC----ceecChhhCCEEEEecCCc--ccCCCcceEEEE
Confidence 999999999987 56679999888875 6788987 8999999999999887653 458999999999
Q ss_pred ecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-CCCccccccCHHHHHHHHH
Q 006709 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 239 vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-~~gklI~~ls~~e~~~li~ 317 (634)
+|.+.|+++|++|.|||++|++.+..|+.+++|+|.+|+++|.+|+||+|+|+|||||+. .. ++|++++.+|+++++.
T Consensus 148 ~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~~-~~i~~i~~~e~~~~~~ 226 (282)
T 2bty_A 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDG-KLISTLTPDEAEELIR 226 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETT-EECCEECHHHHHHHHT
T ss_pred ecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeecCc-hhhhhCCHHHHHHHHH
Confidence 999999999999999999999988889999999999999999999999999999999974 33 9999999998887753
Q ss_pred hhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccc
Q 006709 318 QRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRL 397 (634)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~ 397 (634)
.+ ..+||
T Consensus 227 ~g------------------------------------------------------------------~~~gG------- 233 (282)
T 2bty_A 227 DG------------------------------------------------------------------TVTGG------- 233 (282)
T ss_dssp TT------------------------------------------------------------------CSCTT-------
T ss_pred cC------------------------------------------------------------------CCCCc-------
Confidence 21 13456
Q ss_pred cCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 398 NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 398 ~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+|++||..|+++|+++++|+||+.+++|+.++|++++.||+|.++
T Consensus 234 --M~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 280 (282)
T 2bty_A 234 --MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp --HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred --HHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999999999999999899999999999889999999999999764
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=386.64 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=229.3
Q ss_pred HHHhhhHHHhhcC----CeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccC
Q 006709 87 FREAWPYLWAHRG----GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRI 162 (634)
Q Consensus 87 ~r~a~pYi~~~r~----k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~Rv 162 (634)
.||+.|||++||+ +++|||+||+++++ .+++++++|+.|+..|.++||||||||+++..++++|++++|++|+|+
T Consensus 32 ~re~~~yi~~f~~~~~~~~iViK~GGsv~~~-~~~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~Rv 110 (307)
T 3zzh_A 32 KREVEQYLKYFTSVSQQQFAVIKVGGAIISD-NLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRI 110 (307)
T ss_dssp HHHHHHHHHHHHCCCCSCCEEEEECHHHHHH-SHHHHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEEC
T ss_pred hhhHHHHHHHHhCCCCCCEEEEEEChHHhhc-hHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeec
Confidence 5678999999998 89999999999876 489999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHH
Q 006709 163 TDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVT 242 (634)
Q Consensus 163 T~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~ 242 (634)
|++++|+++.++++++|..|+++ |+++|++ ++++++ +++++++ .+++||||+|+|+.+|.+
T Consensus 111 Td~~~l~vv~m~~~~vn~~lv~~---------L~~~G~~----Av~l~g---g~~~a~~---~~~~d~g~~G~i~~v~~~ 171 (307)
T 3zzh_A 111 TDEHTMAVVRKCFLEQNLKLVTA---------LEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKE 171 (307)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHH---------HHHTTCC----EEEECS---SSEEEEE---SCHHHHBSBEEEEEECCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH---------HHhCCCC----eeEEcC---CcEEEEe---cCccccCccccccccCHH
Confidence 99999999966678999999886 6889998 888874 4567776 366799999999999999
Q ss_pred HHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC--CCCccccccCHHH-HHHHHHhh
Q 006709 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQR 319 (634)
Q Consensus 243 ~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld--~~gklI~~ls~~e-~~~li~~~ 319 (634)
.|+.+|++|+|||++|++++.+|+++|+|+|.+|+++|.+|+||+|||+|||||+. +++++|++++..| ++.++..+
T Consensus 172 ~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~~~~~~i~~i~~~e~~~~l~~~~ 251 (307)
T 3zzh_A 172 PIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQS 251 (307)
T ss_dssp HHHHHHHHTCEEEECCCEECTTCBEEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEETTTTEECCEEEHHHHHHHHHTST
T ss_pred HHHHHHHCCCEEEEeCCeECCCCcEEecCHHHHHHHHHHhCCCCEEEEEeCCcceecCCCCcCCcccCHHHHHHHHHhCC
Confidence 99999999999999999998889999999999999999999999999999999974 5899999999875 56665321
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
+.+||
T Consensus 252 ------------------------------------------------------------------~~tGG--------- 256 (307)
T 3zzh_A 252 ------------------------------------------------------------------WVKYG--------- 256 (307)
T ss_dssp ------------------------------------------------------------------TSCHH---------
T ss_pred ------------------------------------------------------------------CCCCc---------
Confidence 23466
Q ss_pred CHHHHHHHHHHHHc---CCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 400 YLSELAAAAFVCRR---GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 400 m~~Kl~AA~~a~~~---Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+||+||..|++. |. .++|++ ++.|+.|+|++++.||+|.+.
T Consensus 257 M~~Kl~aa~~a~~~v~~g~-~v~I~~---~~~ll~elft~~g~GT~I~~~ 302 (307)
T 3zzh_A 257 TKLKIREIKELLDYLPRSS-SVAIIN---VQDLQKELFTDSGAGTMIRRG 302 (307)
T ss_dssp HHHHHHHHHHHHHHSCTTC-CEEEEC---GGGHHHHHHSCCCCSEEEECC
T ss_pred HHHHHHHHHHHHHHhccCe-EEEEeC---ccHHHHHHhcCCCCcEEEecC
Confidence 99999975555554 64 599998 778899999999999999764
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=365.64 Aligned_cols=233 Identities=26% Similarity=0.345 Sum_probs=215.8
Q ss_pred CeEEEEECCccCCCCChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHHhHH
Q 006709 100 GTFVVIISGEIVSSPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAAGGI 178 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a~G~i 178 (634)
|++|||+||+++++. +++++++|+.|+..|+++||||||||+++..++++|+++++.+|+|+|++++|+++ ++++|++
T Consensus 37 k~iVIKiGGs~l~~~-~~~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~l 115 (279)
T 3l86_A 37 DIIVIKIGGVASQQL-SGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLV 115 (279)
T ss_dssp CEEEEEECTTGGGSC-CHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTT
T ss_pred ceEEEEEChHHHHhH-HHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHHH
Confidence 799999999999873 78999999999999999999999999999999999999999999999999999998 5689999
Q ss_pred HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEEEcC
Q 006709 179 RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 258 (634)
Q Consensus 179 n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~ 258 (634)
|..++++ |+++|++ ++++++.|++|+++++. ++.||+++|+|+.+|.+.|+.||++|+|||++|
T Consensus 116 n~~i~~~---------L~~~G~~----a~~l~g~dg~llta~~~---~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~ 179 (279)
T 3l86_A 116 GKNLQEK---------LRQAGVS----CQQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILAS 179 (279)
T ss_dssp HHHHHHH---------HHHTTCC----EEECSGGGGGTEEEEES---CHHHHBSBEEEEEECHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHH---------HHhCCCC----EEEEecCcCCEEEeecc---CccccCcccccchhhHHHHHHHHhCCcEEEECC
Confidence 9999886 6889988 89999999999999875 667999999999999999999999999999999
Q ss_pred CccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccc
Q 006709 259 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 338 (634)
Q Consensus 259 v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~ 338 (634)
++++.+|+.+|+|+|.+|+++|.+|+||+|||+|||||++.++++|++++.+|+++++..+
T Consensus 180 v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~d~~~I~~i~~~e~~~l~~~~------------------- 240 (279)
T 3l86_A 180 LGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTA------------------- 240 (279)
T ss_dssp EEECTTSCEEECCHHHHHHHHHHHTTCSEEEEECSSSSCEETTEECCEEEGGGSHHHHHTT-------------------
T ss_pred cEECCCCCEeecCHHHHHHHHHHHcCCCEEEEEeCCCccccCCEehhhccHHHHHHHHhCC-------------------
Confidence 9999899999999999999999999999999999999987789999999998888876421
Q ss_pred cccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceE
Q 006709 339 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 418 (634)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv 418 (634)
+.+|| |.+||+||..|++.|++++
T Consensus 241 -----------------------------------------------~~tGG---------M~~Kl~aa~~a~~~Gv~~v 264 (279)
T 3l86_A 241 -----------------------------------------------VITAG---------MIPKIESAAKTVAAGVGQV 264 (279)
T ss_dssp -----------------------------------------------SSCTT---------HHHHHHHHHHHHHTTCSEE
T ss_pred -----------------------------------------------CCcCc---------HHHHHHHHHHHHHcCCCEE
Confidence 23466 9999999999999999999
Q ss_pred EEccCC
Q 006709 419 HLLDGT 424 (634)
Q Consensus 419 ~I~~g~ 424 (634)
||+|+.
T Consensus 265 ~I~~~~ 270 (279)
T 3l86_A 265 LIGDNL 270 (279)
T ss_dssp EEESSS
T ss_pred EEeccC
Confidence 999975
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=326.79 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=225.5
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCC-eEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHHH
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEAA 175 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~-kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a~ 175 (634)
++++|||+||+++++++ +++++++|+.++..|. ++|||||||++++.+++.+++++++..|+|+|+.+.++.+ ++++
T Consensus 2 m~~~ViK~GGs~l~~~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~ 81 (258)
T 1gs5_A 2 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALA 81 (258)
T ss_dssp CCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHH
T ss_pred CccEEEEEChhHhCChHHHHHHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHh
Confidence 47899999999999876 8999999998877655 5899999999999999999999889999999999999886 6788
Q ss_pred hHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 176 G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
+.+|..+++. |+++|++ ++++++.+++|+++++.+ +|++++|+++.++.+.|+.+|++|.|||
T Consensus 82 ~~~n~~l~~~---------l~~~G~~----a~~l~~~~~~~~~~~~~~----~d~~~~g~~~~~~~~~i~~ll~~g~ipV 144 (258)
T 1gs5_A 82 GTANKTLLAW---------AKKHQIA----AVGLFLGDGDSVKVTQLD----EELGHVGLAQPGSPKLINSLLENGYLPV 144 (258)
T ss_dssp THHHHHHHHH---------HHHTTCC----EEEECTTGGGCEEEEECC----GGGBSBEEEEECCCHHHHHHHHTTCEEE
T ss_pred ccchHHHHHH---------HHHCCCC----eEEEeecCCCEEEEEEcC----CCCCCcCceeEECHHHHHHHHHCCCEEE
Confidence 9999988875 5789998 899999999999998753 5789999999999999999999999999
Q ss_pred EcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhh
Q 006709 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVA 334 (634)
Q Consensus 256 v~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~ 334 (634)
+++++.+.+|+++|+|+|.+|+++|.+|+|| |+|+|||||+ +.++++|++++.+|+++++..+
T Consensus 145 i~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~--------------- 208 (258)
T 1gs5_A 145 VSSIGVTDEGQLMNVNADQAATALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQG--------------- 208 (258)
T ss_dssp ECSEEECTTSCEEECCHHHHHHHHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTT---------------
T ss_pred EeCCcCCCCCcEEEecHHHHHHHHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcC---------------
Confidence 9999989999999999999999999999999 9999999997 4679999999999998886421
Q ss_pred hccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcC
Q 006709 335 EEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRG 414 (634)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~G 414 (634)
..+|| |.+|+.+|..+|+.+
T Consensus 209 ---------------------------------------------------~~~gG---------m~~k~~~a~~~~~~~ 228 (258)
T 1gs5_A 209 ---------------------------------------------------IITDG---------MIVKVNAALDAARTL 228 (258)
T ss_dssp ---------------------------------------------------CSCTH---------HHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------CCCCc---------HHHHHHHHHHHHHhC
Confidence 12455 999999999999875
Q ss_pred CceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 415 VQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 415 v~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+.++||+|++.++. |.++|++++.||+|.
T Consensus 229 ~~~v~I~~~~~~~~-l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 229 GRPVDIASWRHAEQ-LPALFNGMPMGTRIL 257 (258)
T ss_dssp TSCEEEEESSCGGG-HHHHHTTCCSSEEEC
T ss_pred CCEEEEecCCCchH-HHHHhcCCCCcEEEe
Confidence 55799999999987 789999999999985
|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=325.09 Aligned_cols=235 Identities=11% Similarity=0.174 Sum_probs=187.9
Q ss_pred CCeEEEEECCccCCCCC----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccccc---------CC
Q 006709 99 GGTFVVIISGEIVSSPY----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYL---------GR 159 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~---------~G 159 (634)
+|++|||+||++|++++ +++++++|+.++ +.++||||||||+++..+++++++++|. .|
T Consensus 2 ~k~iVIKlGG~~l~~~~~~~~~~~~~~l~~l~~~i~~l~--~~~~vlVhGGG~~~~~~~~~~gi~~~~~~~~g~~~~~~G 79 (269)
T 3ll9_A 2 SHMIILKLGGSVITRKDSEEPAIDRDNLERIASEIGNAS--PSSLMIVHGAGSFGHPFAGEYRIGSEIENEEDLRRRRFG 79 (269)
T ss_dssp -CCEEEEECHHHHEECCSSSCEECHHHHHHHHHHHHHHC--CSSEEEEECCGGGTHHHHHHHTTTSCCCSHHHHHHHHHH
T ss_pred CCEEEEEEChhheecCccccccccHHHHHHHHHHHHHhc--CCCEEEEECCcHHHHHHHHHcCCCcccccCcccccccch
Confidence 68999999999998765 578999998875 6899999999999999999999998876 44
Q ss_pred ccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEe
Q 006709 160 YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV 239 (634)
Q Consensus 160 ~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~v 239 (634)
+|+|+. +++++|..++++ |+++|++ ++++++.+..+++ +|+++.+
T Consensus 80 ~rvT~~--------~~~~ln~~l~~~---------L~~~G~~----a~~l~g~~~~~~~--------------~g~v~~v 124 (269)
T 3ll9_A 80 FALTQN--------WVKKLNSHVCDA---------LLAEGIP----AVSMQPSAFIRAH--------------AGRISHA 124 (269)
T ss_dssp HHHHHH--------HHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEEEE--------------TTEEEEE
T ss_pred hhHHHH--------HHHHHHHHHHHH---------HHHCCCc----EEEEcchHcCeEe--------------cCeeeee
Confidence 444443 345788887775 6889998 8999998876553 5889999
Q ss_pred cHHHHHHHHcCCcEEEEcC-CccCCC--CceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCH
Q 006709 240 DVTRMRERLDGGCLVILSN-LGYSSS--GEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL 309 (634)
Q Consensus 240 d~~~I~~LLd~G~IPVv~~-v~~~~~--Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~ 309 (634)
|.+.|+.+|++|.|||++| ++.+.+ |+++|+|+|.+|+++|.+|+||+|+|+|||||++ +++++|++++.
T Consensus 125 ~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~ 204 (269)
T 3ll9_A 125 DISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGS 204 (269)
T ss_dssp CCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC
T ss_pred cHHHHHHHHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCH
Confidence 9999999999999999998 677777 8999999999999999999999999999999973 45778999998
Q ss_pred HHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccC
Q 006709 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (634)
Q Consensus 310 ~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~G 389 (634)
.|+++++.... ..+.+|
T Consensus 205 ~e~~~~l~~~~---------------------------------------------------------------~~~~tg 221 (269)
T 3ll9_A 205 LDDLESLDGTL---------------------------------------------------------------NTDVTG 221 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcccC---------------------------------------------------------------CCcCcC
Confidence 88766553110 014567
Q ss_pred cccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCC-ccccc
Q 006709 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 444 (634)
Q Consensus 390 G~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~-GT~I~ 444 (634)
| |.+||+||..||+.|+ ++||+||+.++.|+ ++|++++. ||+|.
T Consensus 222 G---------M~~Kl~aa~~a~~~Gv-~v~I~~g~~~~~l~-~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 222 G---------MVGKIRELLLLAEKGV-ESEIINAAVPGNIE-RALLGEEVRGTRIT 266 (269)
T ss_dssp -----------SHHHHHHHHHHHTTC-CEEEEESSSTTHHH-HHHHTCCCSSEEC-
T ss_pred C---------cHHHHHHHHHHHhCCC-eEEEEeCCCchHHH-HHHCCCCCCcEEEE
Confidence 7 9999999999999999 79999999999865 99999999 99986
|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=321.83 Aligned_cols=258 Identities=19% Similarity=0.158 Sum_probs=211.8
Q ss_pred cCCeEEEEECCccCC--CC---------ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHH
Q 006709 98 RGGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSE 166 (634)
Q Consensus 98 r~k~iVIKLGGsvL~--~~---------~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~ 166 (634)
+++++|||+||++|+ ++ .++.++++|+.|++.|+++|||||||++++.+++++++++++ |++.
T Consensus 3 ~~~~iVIKlGGs~l~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~------t~~~ 76 (316)
T 2e9y_A 3 SGRLAVIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPE------RPRQ 76 (316)
T ss_dssp -CCEEEEECCHHHHSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTT------SCCC
T ss_pred CCCEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCC------CCHH
Confidence 468999999999998 53 267899999999999999999999999999999999988654 6777
Q ss_pred HHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCc----ceeEEeeccCCceeeee-ecccc-c-------Cccccc
Q 006709 167 SLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAK-RKGVV-D-------GVDYGA 232 (634)
Q Consensus 167 ~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~----~~av~l~~~dg~~l~ak-~~g~~-~-------g~d~g~ 232 (634)
+|+.+ ++++|++++.|+..|. ..|.++|++++ +.++.+++.|++|..++ +.|.+ + ..+++|
T Consensus 77 ~l~~~~~~~~G~i~~~l~~~l~-----~~l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~ 151 (316)
T 2e9y_A 77 PLYIATAMTQAWIGLLLKHSLE-----EELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGW 151 (316)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-----HHHHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhHHHHHHHHHHH-----HHHHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcce
Confidence 88886 5789999988888774 37889998743 33479999999988865 33432 1 124666
Q ss_pred c--ce--------------EEEecHHHHHHHHcCCcEEEEc-----CCccCCCC----ceeeechHHHHHHHHHHcCCCE
Q 006709 233 T--GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSG----EVLNCNTYEVATACALAIEADK 287 (634)
Q Consensus 233 ~--G~--------------v~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~G----ei~nid~D~lAa~LA~aL~Adk 287 (634)
+ |. ++.++.+.|++||++|.|||++ |++.+.+| +.+|+|+|.+|+++|.+|+||+
T Consensus 152 ~~~~~~g~g~r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~ 231 (316)
T 2e9y_A 152 VFKRDPRGGFRRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADL 231 (316)
T ss_dssp EEEECTTSSEEEEECCCCEEEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSE
T ss_pred eeeccccccceecccCCCcceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCE
Confidence 4 33 6779999999999999999998 77777777 6678899999999999999999
Q ss_pred EEEeecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccc
Q 006709 288 LICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSER 362 (634)
Q Consensus 288 LI~LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (634)
|||+|||||++ |++++|++++.+|+++++..+.
T Consensus 232 LiilTdVdGVy~dp~~p~a~~i~~i~~~e~~~~~~~g~------------------------------------------ 269 (316)
T 2e9y_A 232 LVILTDVPGVAVNYGREGERWLRRAAASELKKYLREGH------------------------------------------ 269 (316)
T ss_dssp EEEEESSSSCEETTTSTTCEECSEEEHHHHHHHHHTTC------------------------------------------
T ss_pred EEEEeCchHhhCCCCCCCCcCCcEEcHHHHHHHHhcCC------------------------------------------
Confidence 99999999973 3699999999999888864211
Q ss_pred hhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccc
Q 006709 363 RIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 442 (634)
Q Consensus 363 ~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~ 442 (634)
|.+|| |.+||+||..|++.|++++||++ ++. |.++|++ +.||+
T Consensus 270 -----------------------~~~Gg---------M~~Kv~aa~~a~~~gv~~v~I~~---~~~-l~~~l~g-~~GT~ 312 (316)
T 2e9y_A 270 -----------------------FPPGS---------MGPKVEAAISFVERTGKPAVIGS---LEE-ARQVLSL-QAGTV 312 (316)
T ss_dssp -----------------------SCTTT---------HHHHHHHHHHHHHHHCSCEEEEE---STT-HHHHHTT-SSSEE
T ss_pred -----------------------CCCCC---------HHHHHHHHHHHHHcCCCeEEECc---HHH-HHHHHcC-CCCeE
Confidence 34566 99999999999999998899997 233 7788886 89999
Q ss_pred ccc
Q 006709 443 VAS 445 (634)
Q Consensus 443 I~~ 445 (634)
|.+
T Consensus 313 i~~ 315 (316)
T 2e9y_A 313 VML 315 (316)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=315.93 Aligned_cols=258 Identities=17% Similarity=0.182 Sum_probs=207.3
Q ss_pred CCeEEEEECCccCCC-----C----ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSS-----P----YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~-----~----~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
++++|||+||+++++ + .++.++++|+.|++.|+++|||||||++++.++++++++.++ +|+.++|+
T Consensus 2 ~k~iVIKlGGs~l~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~-----~~~~~~l~ 76 (310)
T 2we5_A 2 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSE-----KNPAMPLD 76 (310)
T ss_dssp CCEEEEECCGGGGCCSSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSS-----SSCCCCHH
T ss_pred CcEEEEEEChHHhcCCCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCC-----CCCHHHHH
Confidence 579999999999986 2 378899999999999999999999999999999999887654 46888899
Q ss_pred HH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCccee----EEeeccCCceee-eeecccc-cCcc-------------
Q 006709 170 AA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHE----VGVSVASGNFLA-AKRKGVV-DGVD------------- 229 (634)
Q Consensus 170 ~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~a----v~l~~~dg~~l~-ak~~g~~-~g~d------------- 229 (634)
++ ++++|++++.+..+|+ ..|...|++.++.. ++++..|++|.. +++.|++ .+.|
T Consensus 77 ~~~a~~~G~l~~~i~~al~-----~~l~~~g~~~~v~~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~ 151 (310)
T 2we5_A 77 TCVAMTQGSIGYWLSNALN-----QELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKE 151 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----HHHHHTTCCCCEEEBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEE
T ss_pred HHHHHhhhHHHHHHHHHHH-----HHHHhcCCchhhHhhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccc
Confidence 87 6899999998887654 25778888755443 677777776532 2333332 1111
Q ss_pred ---cccc---c---eEEEecHHHHHHHHcCCcEEEEc-----CC-ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecc
Q 006709 230 ---YGAT---G---EVKKVDVTRMRERLDGGCLVILS-----NL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (634)
Q Consensus 230 ---~g~~---G---~v~~vd~~~I~~LLd~G~IPVv~-----~v-~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDV 294 (634)
.+|. | +++.++.+.|+.||++|+|||++ |+ ..+..|+++|+|+|++|+++|.+|+||+|+|+|||
T Consensus 152 ~~~~~~~~vv~sp~~i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdV 231 (310)
T 2we5_A 152 DAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGV 231 (310)
T ss_dssp CTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cCCcceeeccCCcccceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCc
Confidence 1331 3 56779999999999999999999 66 55567899999999999999999999999999999
Q ss_pred cccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccC
Q 006709 295 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (634)
Q Consensus 295 dgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (634)
||++ |++++|++++.+|+++++..+.
T Consensus 232 dGVy~dp~~~~a~~i~~i~~~e~~~~~~~g~------------------------------------------------- 262 (310)
T 2we5_A 232 DYVCINYGKPDEKQLTNVTVAELEEYKQAGH------------------------------------------------- 262 (310)
T ss_dssp SSCEESTTSTTCEECCEEEHHHHHHHHHTTC-------------------------------------------------
T ss_pred hHhhCCCCCCCCeECCEEcHHHHHHHhhCCC-------------------------------------------------
Confidence 9973 4699999999999888864211
Q ss_pred CcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCc-eEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ-RVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 370 ~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~-rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+|| |.+||+||..|++.|+. ++||++ ++. |.++|++++.||+|.
T Consensus 263 ----------------~~~Gg---------M~~Kv~aa~~a~~~gv~~~v~I~~---~~~-l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 263 ----------------FAPGS---------MLPKIEAAIQFVESQPNKQAIITS---LEN-LGSMSGDEIVGTVVT 309 (310)
T ss_dssp ----------------SCTTT---------THHHHHHHHHHHHHSTTCEEEEEC---SGG-GGGCBTTBCCSEEEE
T ss_pred ----------------CCCCC---------hHHHHHHHHHHHHcCCCceEEECc---HHH-HHHHHcCCCCCeEEe
Confidence 23456 99999999999999994 899997 333 678899999999985
|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=311.06 Aligned_cols=240 Identities=12% Similarity=0.104 Sum_probs=196.7
Q ss_pred hhcCCe-EEEEECCccCCCCC---------hHHHHHHHHHHHhCC------CeEEEEeCchHHHHHHHHHcCCccc----
Q 006709 96 AHRGGT-FVVIISGEIVSSPY---------LDPILKDIAFLHHLG------IRFVLVPGTHVQIDKLLSERGHEAK---- 155 (634)
Q Consensus 96 ~~r~k~-iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G------~kvVLVHGGG~~I~~~l~~lg~~~~---- 155 (634)
.||+++ +|||+||++|++++ +++++++|+.|+..| .++|||||||++++..++++|++++
T Consensus 2 ~~~~~m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lgi~~~~~~~ 81 (266)
T 3k4o_A 2 SHGGSMLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLKIEDGKKI 81 (266)
T ss_dssp -----CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGEEECSSSEE
T ss_pred CCCCceEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcCCCcccCcc
Confidence 377876 99999999999862 789999999998888 9999999999999999999999877
Q ss_pred cc---CCccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccc
Q 006709 156 YL---GRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 232 (634)
Q Consensus 156 ~~---~G~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~ 232 (634)
+. .|+|+|+.++ .++|..++++ |+++|++ ++++++.|..+.+
T Consensus 82 ~~~~~~G~r~T~~a~--------~~ln~~l~~~---------l~~~G~~----a~~l~~~d~~~~~-------------- 126 (266)
T 3k4o_A 82 FINMEKGFWEIQRAM--------RRFNNIIIDT---------LQSYDIP----AVSIQPSSFVVFG-------------- 126 (266)
T ss_dssp ECCHHHHHHHHHHHH--------HHHHHHHHHH---------HHTTTCC----EEEECGGGTCEES--------------
T ss_pred cccccCceeHHHHHH--------HHHHHHHHHH---------HHHCCCc----EEEeeHHHcCccc--------------
Confidence 65 5666655433 4678777765 6889988 8888887765443
Q ss_pred cceEEEecHHHHHHHHcCCcEEEEcC-CccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCCCCccccccCHHH
Q 006709 233 TGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311 (634)
Q Consensus 233 ~G~v~~vd~~~I~~LLd~G~IPVv~~-v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~~gklI~~ls~~e 311 (634)
.| +.+|.+.|+.+|++|.|||++| ++.+..++++|+|+|.+|+++|.+|+||+|+|+|||||++.++++|++++..|
T Consensus 127 ~g--~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~d~~~i~~~~~~e 204 (266)
T 3k4o_A 127 DK--LIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDNKPIKRIDKNN 204 (266)
T ss_dssp SS--CBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSBSSSSBCSEECTTT
T ss_pred Cc--eEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEEeCCeecCcCCHHH
Confidence 12 4678999999999999999998 67778888999999999999999999999999999999888889999999887
Q ss_pred HHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcc
Q 006709 312 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 391 (634)
Q Consensus 312 ~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~ 391 (634)
++++++.-. + .++ ++.+||
T Consensus 205 ~~~l~~~~~-------------------------------~----------------~~~-------------~~~tGG- 223 (266)
T 3k4o_A 205 IYKILNYLS-------------------------------G----------------SNS-------------IDVTGG- 223 (266)
T ss_dssp HHHHHHHHH-------------------------------S----------------TTC-------------SCCSSH-
T ss_pred HHHHHHHhc-------------------------------c----------------ccC-------------CcccCC-
Confidence 777764210 0 001 256778
Q ss_pred cccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 392 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 392 ~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+||++|..||+ ++||+||+.++. |.++|++++.||+|.+.
T Consensus 224 --------M~~Kv~aa~~a~~----~v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 224 --------MKYKIEMIRKNKC----RGFVFNGNKANN-IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp --------HHHHHHHHHHTTC----EEEEEETTSTTH-HHHHHTTCCCSEEEECC
T ss_pred --------HHHHHHHHHHHhc----CEEEEeCCCccH-HHHHhCCCCCceEEEeC
Confidence 9999999999987 799999999997 78999999999999763
|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=312.62 Aligned_cols=259 Identities=18% Similarity=0.206 Sum_probs=209.6
Q ss_pred CCeEEEEECCccCC--CC---------ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 006709 99 GGTFVVIISGEIVS--SP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~--~~---------~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~ 167 (634)
++++|||+||++|+ ++ .+++++++|+.|++.|+++||||||||+++..+.++++.+++ + +++..+
T Consensus 2 ~k~iViK~GGsal~~~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~-~---~~~~~~ 77 (314)
T 1e19_A 2 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQAT-Y---GIPAQP 77 (314)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHH-H---CCCCCC
T ss_pred CCEEEEEEChHHhcCCCCccchhhhHHHHHHHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCcccc-C---CCChhH
Confidence 68999999999999 53 267899999999999999999999999999999999887765 2 567777
Q ss_pred HHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCc----ceeEEeeccCCceeeeee-ccc-ccC-------cccccc
Q 006709 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAKR-KGV-VDG-------VDYGAT 233 (634)
Q Consensus 168 l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~----~~av~l~~~dg~~l~ak~-~g~-~~g-------~d~g~~ 233 (634)
|+++ ++.+|++++.|+..|+ ..|.++|++++ +.++.+++.|++|..+++ .|. +.+ .|+||+
T Consensus 78 l~~~~a~~~G~i~~~l~~~l~-----~~l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~ 152 (314)
T 1e19_A 78 MDVAGAMSQGWIGYMIQQALK-----NELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 152 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHhhHHHHHHHHHHH-----HHHHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCcc
Confidence 8886 6789999999988875 37899998752 234788999988877643 232 110 135553
Q ss_pred --ce--------------EEEecHHHHHHHHcCCcEEEEc-----CCccCCC---CceeeechHHHHHHHHHHcCCCEEE
Q 006709 234 --GE--------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLI 289 (634)
Q Consensus 234 --G~--------------v~~vd~~~I~~LLd~G~IPVv~-----~v~~~~~---Gei~nid~D~lAa~LA~aL~AdkLI 289 (634)
|. ++.++.+.|+.||++|+|||++ |++.+.+ |..+|+|+|.+|+++|.+|+||+|+
T Consensus 153 ~~g~~~~~~~~~v~s~~~i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li 232 (314)
T 1e19_A 153 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 232 (314)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred ccccccccccccccCcccceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEE
Confidence 22 7789999999999999999998 7766655 5667999999999999999999999
Q ss_pred EeecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchh
Q 006709 290 CIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (634)
Q Consensus 290 ~LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (634)
|+|||||++ +++++|++++.+|+++++..+.
T Consensus 233 ~lTdVdGvy~~~p~~~a~~i~~i~~~e~~~~~~~g~-------------------------------------------- 268 (314)
T 1e19_A 233 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 268 (314)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred EeccCCEEECCCCCCCCeECCEECHHHHHHHHhCCC--------------------------------------------
Confidence 999999972 3699999999998888864211
Q ss_pred ccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 365 ~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+|| |.+||++|..+++.|+.++||+++ + .|.++|++ +.||+|.
T Consensus 269 ---------------------~~~Gg---------M~~Kv~aa~~~~~~~~~~v~I~~~--~--~l~~~~~g-~~GT~i~ 313 (314)
T 1e19_A 269 ---------------------FKAGS---------MGPKVLAAIRFIEWGGERAIIAHL--E--KAVEALEG-KTGTQVL 313 (314)
T ss_dssp ---------------------SCTTT---------HHHHHHHHHHHHHHTCSEEEEEEG--G--GHHHHHTT-SSSEEEE
T ss_pred ---------------------cCCCC---------hHHHHHHHHHHHHhCCCeEEEecH--H--HHHHHHcC-CCCeEEc
Confidence 34566 999999999999988888999984 2 37889986 6999985
Q ss_pred c
Q 006709 445 S 445 (634)
Q Consensus 445 ~ 445 (634)
+
T Consensus 314 ~ 314 (314)
T 1e19_A 314 P 314 (314)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=294.92 Aligned_cols=262 Identities=15% Similarity=0.179 Sum_probs=194.0
Q ss_pred cCCeEEEEECCccCCCCC------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 98 RGGTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
.+|+||||+|||+|.++. ++.++++|+.|.+.|++|||||||||||+.++..++....+..+.+..+ ++++
T Consensus 23 ~MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~~~~~~~~~~~---l~~~ 99 (332)
T 4axs_A 23 HMSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAKKANEKTALVP---FAEA 99 (332)
T ss_dssp ---CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTTTTSCCCCCC---HHHH
T ss_pred CcceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhccccCCCCCch---hHHH
Confidence 358899999999998742 6789999999999999999999999999988776655443333333333 4443
Q ss_pred -HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceeee-eecccc-----------------cCc
Q 006709 172 -MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLAA-KRKGVV-----------------DGV 228 (634)
Q Consensus 172 -~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~a-k~~g~~-----------------~g~ 228 (634)
.+.++.+.+.|+..|. ..|.++|+..++. ++.++..|..|..+ ++.|+. +..
T Consensus 100 ~a~tqg~ig~~l~~~l~-----~~l~~~gi~~~v~~~vtqv~V~~~D~af~~p~K~iG~~~~~~ea~~l~~~~~~~~~~~ 174 (332)
T 4axs_A 100 GGMSQGYIGYHMLTAIS-----NELKKLNIQKDVLYFLTQTIVDANDPAFKNPTKPVGPFYSSKEIAEANNPNSVIVEDA 174 (332)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHHTTCCCCEEECCCEEEECTTCHHHHSCCEECSCCCC--------CTTSCCC---
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHhcCCCcceeeeeeeeeecccchhhhCcCceeccccCHHHHHHHHhcCCEEEEcc
Confidence 4577888888888874 3688888775433 56777877666653 333321 001
Q ss_pred c------ccccceEEEecHHHHHHHHcCCcEEEEcCC--------ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecc
Q 006709 229 D------YGATGEVKKVDVTRMRERLDGGCLVILSNL--------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDG 294 (634)
Q Consensus 229 d------~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v--------~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDV 294 (634)
. .+..+.++.++.+.|+.|+++|+|||+++. +.+.+|+.+|+|+|.+|++||.+|+||+|||||||
T Consensus 175 ~~g~rrvV~sp~p~~ive~~~I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV 254 (332)
T 4axs_A 175 GRGFRKVVASPIPVDFIGIDAIKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAV 254 (332)
T ss_dssp -----CEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCCceEECCCCCCceeecHHHHHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecC
Confidence 1 223455678999999999999999887532 22335778899999999999999999999999999
Q ss_pred ccc-----CCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccC
Q 006709 295 PIL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 369 (634)
Q Consensus 295 dgl-----d~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (634)
||+ +|++++|++++.+|+++++.++.
T Consensus 255 ~gv~~~~~~~~~~~i~~it~~e~~~~~~~g~------------------------------------------------- 285 (332)
T 4axs_A 255 DYVYVDFNKPTQKALKTVDVKALNNFINQDQ------------------------------------------------- 285 (332)
T ss_dssp SSCEESTTSTTCEECSSCBHHHHHHHHHTTC-------------------------------------------------
T ss_pred CceEcCCCCcchhhcccCCHHHHHHHHHCCC-------------------------------------------------
Confidence 997 25678999999999998875421
Q ss_pred CcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 370 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 370 ~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|++|| |.|||+||..|++.|+.+++|+.. .+. +.+++.+ +.||+|.+
T Consensus 286 ----------------~~~Gg---------M~pKv~Aa~~~v~~g~g~~~iI~~-~~~--~~~~l~g-~~GT~IvA 332 (332)
T 4axs_A 286 ----------------FAKGS---------MLPKIKAAMGFVNGHPNRSAIIAD-LSK--VEDALKG-LSGTKIIA 332 (332)
T ss_dssp ----------------SCTTT---------THHHHHHHHHHHTTCTTCEEEEEC-STT--HHHHTTT-SSSEEEBC
T ss_pred ----------------cCcCC---------cHHHHHHHHHHHHhCCCcEEEECC-HHH--HHHHHCC-CCCcEEeC
Confidence 45667 999999999999999887777742 333 5666655 58999863
|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=298.26 Aligned_cols=245 Identities=15% Similarity=0.174 Sum_probs=185.7
Q ss_pred hHHHhhcCCeEEEEECCccCCCCC---------hHHHHHHHHHHHhCCC-eEEEEeCchHHHHHHHHHcCCcccccCCcc
Q 006709 92 PYLWAHRGGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGI-RFVLVPGTHVQIDKLLSERGHEAKYLGRYR 161 (634)
Q Consensus 92 pYi~~~r~k~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~-kvVLVHGGG~~I~~~l~~lg~~~~~~~G~R 161 (634)
.||+.++ +++|||+||++|++++ ++.++++|+.|++.|+ ++|||||||++++..+++++++..+.
T Consensus 17 ~~~~~~~-~~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~l~~~~~~~~~~---- 91 (286)
T 3d40_A 17 RGSHMTP-DFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFS---- 91 (286)
T ss_dssp CSTTSCC-SEEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC------------CCT----
T ss_pred hhhccCC-CEEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHcCCCcccc----
Confidence 5888875 4999999999999863 7899999999999998 69999999999999998888765321
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH
Q 006709 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (634)
Q Consensus 162 vT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~ 241 (634)
.. .+.+..+.++..+++. |.++|++ ++++++.+++| + . | | ++.++.
T Consensus 92 ---~~---~~~vt~g~l~~~l~~~---------l~~~G~~----a~~l~~~~~~~-t-~--------d----g-~~~~~~ 137 (286)
T 3d40_A 92 ---LA---GLTEATFEVKKRWAEK---------LRGIGVD----AFPLQLAAMCT-L-R--------N----G-IPQLRS 137 (286)
T ss_dssp ---TH---HHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGTEE-E-E--------T----T-EEEECC
T ss_pred ---hh---cchhhHHHHHHHHHHH---------HHHcCCc----EEEEEeecCCc-c-c--------C----C-eEEehH
Confidence 11 1223446777777765 6889988 78999988876 2 1 1 3 677889
Q ss_pred HHHHHHHcCCcEEEEcC-CccCCCCceeeechHHHHHHHHHH-cCCCEEEEeecccccC-C---CCccccccCHHHHHHH
Q 006709 242 TRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALA-IEADKLICIIDGPILD-E---SGHLIRFLTLQEADSL 315 (634)
Q Consensus 242 ~~I~~LLd~G~IPVv~~-v~~~~~Gei~nid~D~lAa~LA~a-L~AdkLI~LTDVdgld-~---~gklI~~ls~~e~~~l 315 (634)
+.|+.||++|.|||+++ ++.+.+|+++|+|+|.+|+++|.+ |+||+|+|+|||||++ . ++++|++|+..|++++
T Consensus 138 ~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~~a~~i~~is~~e~~~l 217 (286)
T 3d40_A 138 EVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQA 217 (286)
T ss_dssp SHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC---CEECCEEETTSCHHH
T ss_pred HHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCCCCcCCcccCHHHHHHH
Confidence 99999999999999998 777788889999999999999999 9999999999999973 3 3899999998877666
Q ss_pred HHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccc
Q 006709 316 IRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLS 395 (634)
Q Consensus 316 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~ 395 (634)
++.-. + ++ .+|.+||
T Consensus 218 ~~~~~-------------------------------~----------------------~~-------~~~~tgg----- 232 (286)
T 3d40_A 218 YAALW-------------------------------G----------------------SS-------EWDATGA----- 232 (286)
T ss_dssp HHHHH-------------------------------H----------------------SC-------C----CH-----
T ss_pred HHhhc-------------------------------c----------------------cc-------CCcccCc-----
Confidence 53210 0 00 1256677
Q ss_pred cccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhh-----cCC-ccccccc
Q 006709 396 RLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKR-----DGM-GTMVASD 446 (634)
Q Consensus 396 ~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~-----~g~-GT~I~~D 446 (634)
|.+|++||..|++.|++ ++|+||+.++.| .++|++ ... ||.|..|
T Consensus 233 ----M~~Kl~Aa~~a~~~gv~-v~I~~g~~p~~l-~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 233 ----MHTKLDALVTCARRGAE-CFIMRGDPGSDL-EFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp ----HHHHHHHHHHHHHTTCE-EEEEECCTTCCC-GGGGSCGGGSCTTCCCEEEEC-
T ss_pred ----HHHHHHHHHHHHHCCCc-EEEEeCCCCCcH-HHHhcCcccCcccccceeeeec
Confidence 99999999999999997 999999999985 899987 665 9988654
|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=286.34 Aligned_cols=258 Identities=17% Similarity=0.169 Sum_probs=199.3
Q ss_pred CCeEEEEECCccCCC--C--C-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 006709 99 GGTFVVIISGEIVSS--P--Y-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~--~--~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~ 167 (634)
+|++||+|||++|.. + . ++..++.|+.|.+.|+++||+||+|||++.++....... ...++..
T Consensus 5 ~~~ivvalgGnal~~~g~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~------~~~~~~p 78 (317)
T 3kzf_A 5 GKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAA------GVSPEMP 78 (317)
T ss_dssp CCEEEEECCSTTTC--CCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTT------SSSCCCC
T ss_pred CCEEEEEcChhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhcc------ccCCCCC
Confidence 579999999999943 1 1 578899999999999999999999999998776544322 1235667
Q ss_pred HHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEeeccCCceee-eeeccccc------C---cc---
Q 006709 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGVSVASGNFLA-AKRKGVVD------G---VD--- 229 (634)
Q Consensus 168 l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l~~~dg~~l~-ak~~g~~~------g---~d--- 229 (634)
|+.+ .+.+|.|.+.|+++|++ .|.+.|+..++. .+.|+..|+.|-. .||.|++- . ..
T Consensus 79 ld~~~A~sqG~igy~l~~al~~-----~l~~~g~~~~v~t~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~ 153 (317)
T 3kzf_A 79 LHVCGAMSQGFIGYMMSQAMDN-----VFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGK 153 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHHHTTCCCCEEEBCCEEEECTTCGGGTSCCEECC------------------
T ss_pred ccccCchhhHHHHHHHHHHHHH-----HHHhcCCCCceeEEEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCC
Confidence 8886 68999999999888864 788899887665 3577788887776 35656320 0 11
Q ss_pred -------ccccc------eEEEecHHHHHHHHcCCcEEEEc-----CCccC---CCCceeeechHHHHHHHHHHcCCCEE
Q 006709 230 -------YGATG------EVKKVDVTRMRERLDGGCLVILS-----NLGYS---SSGEVLNCNTYEVATACALAIEADKL 288 (634)
Q Consensus 230 -------~g~~G------~v~~vd~~~I~~LLd~G~IPVv~-----~v~~~---~~Gei~nid~D~lAa~LA~aL~AdkL 288 (634)
.||.. .++.||.+.|+.||++|+|||++ |+..+ .+|..+|+|+|.+|+++|.+|+||+|
T Consensus 154 ~~~ed~grg~RrvV~sP~P~~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~L 233 (317)
T 3kzf_A 154 ILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYL 233 (317)
T ss_dssp --------CCCCEECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCE
T ss_pred eEeecCCCCeeeecCCCCCcceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEE
Confidence 13332 24789999999999999997777 55433 34677899999999999999999999
Q ss_pred EEeecccccC-----CCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccch
Q 006709 289 ICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERR 363 (634)
Q Consensus 289 I~LTDVdgld-----~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (634)
||||||||++ +++++|++++.+|+++++.++
T Consensus 234 IiLTDVdGVy~dp~~p~a~~I~~it~~e~~~li~~g-------------------------------------------- 269 (317)
T 3kzf_A 234 MILTDVLNACINYKKPDERKLEEIKLSEILALEKDG-------------------------------------------- 269 (317)
T ss_dssp EECCSSSSCEESSSCSSCEECCEEEHHHHHHHHTTT--------------------------------------------
T ss_pred EEecCCCeeeCCCCCCCCeECcCcCHHHHHHHHhcC--------------------------------------------
Confidence 9999999972 578999999999988886421
Q ss_pred hccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 364 IATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 364 ~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
.|.+|| |.+||+||..|++.|+.++||+++. .+.++|+++ .||+|
T Consensus 270 ---------------------~~~~GG---------M~pKl~AA~~av~~gg~~v~I~s~~----~l~~~l~G~-~GT~I 314 (317)
T 3kzf_A 270 ---------------------HFAAGS---------MGPKVRAAIEFTQATGKMSIITSLS----TAVDALNGK-CGTRI 314 (317)
T ss_dssp ---------------------SCC--C---------CHHHHHHHHHHHHHHCCCEEECCGG----GHHHHHTTS-SSEEE
T ss_pred ---------------------CCCCCC---------HHHHHHHHHHHHHcCCCeEEEcchH----HHHHHHCCC-CCeEE
Confidence 134567 9999999999999999999999963 256888765 89999
Q ss_pred ccc
Q 006709 444 ASD 446 (634)
Q Consensus 444 ~~D 446 (634)
.+|
T Consensus 315 ~~d 317 (317)
T 3kzf_A 315 IKD 317 (317)
T ss_dssp ECC
T ss_pred ecC
Confidence 865
|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=284.90 Aligned_cols=226 Identities=14% Similarity=0.096 Sum_probs=174.2
Q ss_pred CCeEEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEE-EEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFV-LVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvV-LVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+|++|||+||+++++++ +++++++|+. |+++| ||||||++++..++++|+++++++ |+...|
T Consensus 3 ~k~iViKiGG~~l~~~~~~~~l~~~~l~~l~~~i~~----G~~vv~lVhGGG~~~~~~~~~~gi~~~~~~----~d~~gl 74 (249)
T 3ll5_A 3 FTMMILKIGGSVITDKSAYRTARTYAIRSIVKVLSG----IEDLVCVVHGGGSFGHIKAMEFGLPGPKNP----RSSIGY 74 (249)
T ss_dssp -CCEEEEECHHHHBCTTSTTCBCHHHHHHHHHHHHT----CTTEEEEEECCGGGTHHHHHHHTCSEECCH----HHHHHH
T ss_pred ceEEEEEECccEEecCcccccchHHHHHHHHHHHhc----CCceEEEEECccHHHHHHHHHhCCCcCCCc----cccccH
Confidence 58999999999999852 5677777764 99999 999999999999999999987643 566777
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
.+..+++..+|..++++ |+++|++ ++++++.+. +++|++ +.+.|+.+|
T Consensus 75 ~~t~~~~~~ln~~~v~~---------l~~~G~~----a~~l~~~~~----------------~~~g~v---~~~~i~~ll 122 (249)
T 3ll5_A 75 SIVHRDMENLDLMVIDA---------MIEMGMR----PISVPISAL----------------RYDGRF---DYTPLIRYI 122 (249)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHTTCC----EEECCGGGS----------------CBSSSB---CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHCCCc----EEEEcHHHc----------------ccccEE---cHHHHHHHH
Confidence 77655567888888865 6889998 788776654 335666 889999999
Q ss_pred cCCcEEEEcCC-ccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhc
Q 006709 249 DGGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 249 d~G~IPVv~~v-~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~ 320 (634)
++|.|||+++. ..+.+++++|+|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++. ++....
T Consensus 123 ~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~---- 197 (249)
T 3ll5_A 123 DAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDR---- 197 (249)
T ss_dssp HTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC--------
T ss_pred HCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhccc----
Confidence 99999999973 334567789999999999999999999999999999973 23466777731 110000
Q ss_pred hhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCC
Q 006709 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (634)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m 400 (634)
..++.+|| |
T Consensus 198 --------------------------------------------------------------~~~~~tGg---------M 206 (249)
T 3ll5_A 198 --------------------------------------------------------------VQNDVTGG---------I 206 (249)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------CCCeeECC---------H
Confidence 01245677 9
Q ss_pred HHHHHHHHHH-HHcCCceEEEccCCcchhHHHHHHhhcCC-cccc
Q 006709 401 LSELAAAAFV-CRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMV 443 (634)
Q Consensus 401 ~~Kl~AA~~a-~~~Gv~rv~I~~g~~~~~ll~el~~~~g~-GT~I 443 (634)
.+||+||..| ++.|+ ++||+||+.++.|+. +.+++. ||+|
T Consensus 207 ~~Kl~aA~~a~~~~Gv-~v~I~~g~~~~~l~~--l~g~~~~GT~i 248 (249)
T 3ll5_A 207 GKKFESMVKMKSSVKN-GVYLINGNHPERIGD--IGKESFIGTVI 248 (249)
T ss_dssp HHHHHHHHHHHTTCTT-CEEEEETTSGGGGGG--TTSTTCCSEEE
T ss_pred HHHHHHHHHHHHhcCC-EEEEEeCCChhHHHH--hCCCCCCCEEe
Confidence 9999999999 89999 699999999999776 556888 9987
|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=285.85 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=165.5
Q ss_pred CCeEEEEECCccCCCC-------ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH
Q 006709 99 GGTFVVIISGEIVSSP-------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA 171 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~-------~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~ 171 (634)
.+++|||+||++|+++ .+..++++|+.|++.|+++|||||||++ ..+.+++++. +..+...++++
T Consensus 4 ~k~iVIKiGGs~l~~~~~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~--~g~~~lg~~~------~~~~l~~~qa~ 75 (367)
T 2j5v_A 4 SQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIA--AGREHLGYPE------LPATIASKQLL 75 (367)
T ss_dssp CCEEEEEECHHHHTTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHH--HHHHHHTSCC------CCSSHHHHHHH
T ss_pred CCEEEEEECcHHhcCCCCCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHH--HHHHHcCCCC------CCCCHHHHHHH
Confidence 4799999999999984 2789999999999999999999999855 4567888864 23455555554
Q ss_pred HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH-HHHHHHHcC
Q 006709 172 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDG 250 (634)
Q Consensus 172 ~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~-~~I~~LLd~ 250 (634)
+++|+.. ++..|. ..|+++|++ +.++.....+ +.++++.+|. ++|++||++
T Consensus 76 -aavGq~~--l~~~~~-----~~l~~~G~~----~~qvllt~~d----------------~~~~~r~~n~~~~i~~LL~~ 127 (367)
T 2j5v_A 76 -AAVGQSR--LIQLWE-----QLFSIYGIH----VGQMLLTRAD----------------MEDRERFLNARDTLRALLDN 127 (367)
T ss_dssp -HHHHHHH--HHHHHH-----HHHHTTTCC----EEEEEECGGG----------------GSSHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHH--HHHHHH-----HHHHHcCCc----eEEEEEeccc----------------ccCceEEEhHHHHHHHHHHC
Confidence 4667643 333332 258899987 4444333332 2344556676 899999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCH--HHHHHHHHhhch
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEADSLIRQRVK 321 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~--~e~~~li~~~~~ 321 (634)
|.|||+++++...++++.++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++. +|+++++...
T Consensus 128 g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~-- 205 (367)
T 2j5v_A 128 NVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDS-- 205 (367)
T ss_dssp TCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC------------------------------------
T ss_pred CCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhcc--
Confidence 999999977666667789999999999999999999999999999972 36899999998 6766654210
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
++ +|.+|| |.
T Consensus 206 ------------------------------------------------~s-------------~~gtGg---------M~ 215 (367)
T 2j5v_A 206 ------------------------------------------------VS-------------GLGTGG---------MS 215 (367)
T ss_dssp ------------------------------------------------------------------------------CH
T ss_pred ------------------------------------------------CC-------------CcCcCc---------cH
Confidence 01 145677 99
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
+|++||..|++.|++ ++|+++..++. |.++|++++.||+|.++
T Consensus 216 ~Kl~Aa~~a~~~Gv~-v~I~~g~~~~~-L~~~l~g~~~GT~i~~~ 258 (367)
T 2j5v_A 216 TKLQAADVACRAGID-TIIAAGSKPGV-IGDVMEGISVGTLFHAQ 258 (367)
T ss_dssp HHHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHHTCCCSEEECCC
T ss_pred HHHHHHHHHHHcCCC-EEEEcCCCchH-HHHHhcCCCCcEEEEcC
Confidence 999999999999997 99999999997 58999999999999764
|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=269.70 Aligned_cols=232 Identities=14% Similarity=0.127 Sum_probs=172.7
Q ss_pred CeEEEEECCccCC-----CCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 006709 100 GTFVVIISGEIVS-----SPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (634)
Q Consensus 100 k~iVIKLGGsvL~-----~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~ 173 (634)
|++|||+||++++ +++ +++++++|+.|++. +++|||||||++ ..+..++++. .++++. ++ ..
T Consensus 2 k~iViKlGGs~l~~~~~~~~~~~~~~~~~i~~l~~~-~~vVlVhgGg~~--~~~~~~g~~~-----~~~~~~---~~-l~ 69 (251)
T 2ako_A 2 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEK-YEVILVTSAAIS--AGHTKLDIDR-----KNLINK---QV-LA 69 (251)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHHH-SEEEEEECCHHH--HHHHHCCCCS-----SSHHHH---HH-HH
T ss_pred CEEEEEeCcceeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEECCHHH--HHHHHhCCcc-----CCchHH---HH-HH
Confidence 7899999999999 322 78999999999888 999999999855 5778888875 233333 22 22
Q ss_pred HHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH-HHHHHHHcCCc
Q 006709 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGC 252 (634)
Q Consensus 174 a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~-~~I~~LLd~G~ 252 (634)
++++ ..++..|. ..|.++|++ +.++...+.+ +.++++.+|. +.|+.||++|+
T Consensus 70 ~~~q--~~l~~~~~-----~~l~~~G~~----~~~i~~~~~~----------------~~~~~~~~~~~~~i~~ll~~g~ 122 (251)
T 2ako_A 70 AIGQ--PFLISVYN-----ELLAKFNKL----GGQILLTGKD----------------FDSRKATKHAKNAIDMMINLGI 122 (251)
T ss_dssp HHHH--HHHHHHHH-----HHHGGGTCC----EEEEEECTGG----------------GGCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH--HHHHHHHH-----HHHHHcCCc----EEEEEeccch----------------hcCcceEehHHHHHHHHHHCCC
Confidence 3333 33443332 357899987 4455444432 2444556676 99999999999
Q ss_pred EEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHH--HHHHHHHhhchhh
Q 006709 253 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRVKQS 323 (634)
Q Consensus 253 IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~--e~~~li~~~~~~~ 323 (634)
|||+++.+.-..++..++|+|.+|+++|.+|+||+|+|+|||||++ +++++|++++.. |+.+++....
T Consensus 123 ipVi~~~d~v~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~--- 199 (251)
T 2ako_A 123 LPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTG--- 199 (251)
T ss_dssp EEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC----------
T ss_pred EEEEeCCCceeecceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccC---
Confidence 9999944322233558999999999999999999999999999972 468999999987 6665542100
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
.+|.+|| |.+|
T Consensus 200 ------------------------------------------------------------~~~~~gg---------m~~k 210 (251)
T 2ako_A 200 ------------------------------------------------------------SEHGTGG---------IVTK 210 (251)
T ss_dssp --------------------------------------------------------------CBSCH---------HHHH
T ss_pred ------------------------------------------------------------CCCccCc---------hHHH
Confidence 1245677 9999
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHH--HHhhcCCccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLE--LFKRDGMGTMVA 444 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~e--l~~~~g~GT~I~ 444 (634)
++||..|++.|++ ++|+||+.++.| .+ +|++++.||+|.
T Consensus 211 ~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 211 LKAAKFLLEHNKK-MFLASGFDLSVA-KTFLLEDKQIGGTLFE 251 (251)
T ss_dssp HHHHHHHHHTTCE-EEEEESSSCHHH-HHHHHSCCCCSSEEEC
T ss_pred HHHHHHHHHCCCe-EEEEeCCChhhh-hhhHHhcCCCCceEeC
Confidence 9999999999997 999999999985 77 889889999873
|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=271.16 Aligned_cols=228 Identities=18% Similarity=0.142 Sum_probs=177.7
Q ss_pred HHHhhhHHHhhcCCeEEEEECCccCCCC---ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCC
Q 006709 87 FREAWPYLWAHRGGTFVVIISGEIVSSP---YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRIT 163 (634)
Q Consensus 87 ~r~a~pYi~~~r~k~iVIKLGGsvL~~~---~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT 163 (634)
=.+++|||+.|++ ++|||+||+ ++++ .+.+++++|+.|+ .|+++|||||||++++..++ ++.+ .|.
T Consensus 28 ~~~~~pyi~~~~~-~iVIKiGGs-l~~~~~~~l~~l~~~I~~l~-~G~~vVlV~GGg~~~~~~~~-~~~~----~gl--- 96 (276)
T 2ogx_A 28 PVAGKRPIRLLPW-LQVVKIGGR-VMDRGADAILPLVEELRKLL-PEHRLLILTGAGVRARHVFS-VGLD----LGL--- 96 (276)
T ss_dssp ---CCCCCCSSTT-EEEEEECHH-HHTTTHHHHHHHHHHHHHHT-TTCEEEEEECCTHHHHHHHH-HHHH----TTC---
T ss_pred hcccCchhhhcCC-eEEEEEChh-hcCCCHHHHHHHHHHHHHHh-CCCeEEEEECcHHHHHHHHh-ccCc----CCC---
Confidence 4578999999999 999999999 8774 2899999999998 79999999999999987776 4443 232
Q ss_pred CHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHH
Q 006709 164 DSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTR 243 (634)
Q Consensus 164 ~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~ 243 (634)
+...++.+....+.+|..+++.+ +..+|++ ++.. ..+.+.
T Consensus 97 ~~~~l~~v~~~~~~~n~~l~~~l--------l~~~g~~----~v~~----------------------------~~~~~~ 136 (276)
T 2ogx_A 97 PVGSLAPLAASEAGQNGHILAAM--------LASEGVS----YVEH----------------------------PTVADQ 136 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH--------HGGGTCC----BCCH----------------------------HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH--------HHhcCCC----cccc----------------------------cChHHH
Confidence 45677776555688888888864 4566764 1110 126789
Q ss_pred HHHHHcCCcEEEEcCCc-cC--CC-C-ceeeechHHHHHHHHHHcCCCEEEEeeccccc---CCC------CccccccCH
Q 006709 244 MRERLDGGCLVILSNLG-YS--SS-G-EVLNCNTYEVATACALAIEADKLICIIDGPIL---DES------GHLIRFLTL 309 (634)
Q Consensus 244 I~~LLd~G~IPVv~~v~-~~--~~-G-ei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d~~------gklI~~ls~ 309 (634)
|+.+|++|.|||++++. .+ .. | .+.|+|+|.+|+++|.+|+||+|+|+|||||+ ||+ +++|++++.
T Consensus 137 i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~ 216 (276)
T 2ogx_A 137 LAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSA 216 (276)
T ss_dssp HHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEH
T ss_pred HHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCH
Confidence 99999999999999953 33 22 3 34899999999999999999999999999997 343 899999998
Q ss_pred HHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccC
Q 006709 310 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 389 (634)
Q Consensus 310 ~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~G 389 (634)
+|+.+++ .+|
T Consensus 217 ~e~~~~~----------------------------------------------------------------------g~g 226 (276)
T 2ogx_A 217 TDLAKSE----------------------------------------------------------------------GPL 226 (276)
T ss_dssp HHHHTSC----------------------------------------------------------------------SCC
T ss_pred HHHHHHh----------------------------------------------------------------------CcC
Confidence 7654431 023
Q ss_pred cccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 390 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 390 G~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
| |.+|+.++..+++.|+ +++|+||..++.| .+++++++.||+|.++
T Consensus 227 g---------M~~K~~~~~~~~~~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 227 P---------VDRALLDVMATARHIE-RVQVVNGLVPGRL-TAALRGEHVGTLIRTG 272 (276)
T ss_dssp S---------SCHHHHHHHHTCSSCC-EEEEEETTSTTHH-HHHHTTCCCSEEEECS
T ss_pred C---------hHHHHHHHHHHhcCCC-eEEEEECCCccHH-HHHHcCCCCceEEccC
Confidence 4 9999988887777776 6999999999985 5677888999999765
|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=251.87 Aligned_cols=210 Identities=17% Similarity=0.151 Sum_probs=167.8
Q ss_pred CeEEEEECCccCC--CCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHH---HHHcCCcccccCCccCCCHHHHHHHHH
Q 006709 100 GTFVVIISGEIVS--SPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL---LSERGHEAKYLGRYRITDSESLAAAME 173 (634)
Q Consensus 100 k~iVIKLGGsvL~--~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~---l~~lg~~~~~~~G~RvT~~~~l~~~~~ 173 (634)
+++|||+||++++ +++ +++++++|+.|++.|+++|||||||++++.. +++++++ ..+++...+
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~-----------~~~~~~~~~ 69 (226)
T 2j4j_A 1 MNIILKISGKFFDEDNVDNLIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIG-----------EAYLDLLGI 69 (226)
T ss_dssp CEEEEEECTHHHHTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCC-----------HHHHHHHHH
T ss_pred CeEEEEeccccccCCCHHHHHHHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCC-----------cccHHHHHH
Confidence 4799999999998 533 8999999999999999999999999999885 6777764 245666555
Q ss_pred HHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcE
Q 006709 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (634)
Q Consensus 174 a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~I 253 (634)
....+|..+++. .|+++|++ + + .++.+.|+++|+.|.|
T Consensus 70 ~~~~~~~~l~~~--------~l~~~g~~----~------~------------------------~~~~~~i~~ll~~g~i 107 (226)
T 2j4j_A 70 WASRLNAYLVMF--------SLQDLAYM----H------V------------------------PQSLEEFIQDWSHGKV 107 (226)
T ss_dssp HHHHHHHHHHHH--------HHTTSBCS----C------C------------------------CSSHHHHHHHHTTSSB
T ss_pred HHHHHHHHHHHH--------HHHHhCCC----C------C------------------------cCCHHHHHHHHHCCCE
Confidence 566778777653 35677764 1 1 1356789999999999
Q ss_pred EEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhchhhhhH
Q 006709 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVKQSEIA 326 (634)
Q Consensus 254 PVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~~~~~~~ 326 (634)
||+++ + ..++|+|.+|+++|.+|+||+|+|+|||||+ | +++++|++++.+|+.+++...
T Consensus 108 pVi~g-g------~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~------- 173 (226)
T 2j4j_A 108 VVTGG-F------QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGS------- 173 (226)
T ss_dssp EEECC-C------STTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC---------
T ss_pred EEEcC-C------CCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcC-------
Confidence 99999 2 2389999999999999999999999999997 2 358999999999887775320
Q ss_pred HHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCC--HHHH
Q 006709 327 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY--LSEL 404 (634)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m--~~Kl 404 (634)
++.+|| | .+|+
T Consensus 174 ----------------------------------------------------------~~~~gg---------m~~~~k~ 186 (226)
T 2j4j_A 174 ----------------------------------------------------------QSVQAG---------TYELLDP 186 (226)
T ss_dssp ---------------------------------------------------------------------------CCSCH
T ss_pred ----------------------------------------------------------CCCcCC---------ccccchH
Confidence 123455 7 9999
Q ss_pred HHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 405 ~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
.||..|++.|++ ++|+|+..++.| .++|++++.||+|.+
T Consensus 187 ~a~~~a~~~gi~-v~I~~~~~~~~l-~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 187 LAIKIVERSKIR-VIVMNYRKLNRI-IDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHHHHHHTTCE-EEEEEGGGGGGH-HHHHTTCSSCEEEEC
T ss_pred HHHHHHHHCCCe-EEEEeCCChhHH-HHHHcCCCCceEEee
Confidence 999999999997 999999999985 889999999999864
|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-29 Score=253.45 Aligned_cols=219 Identities=20% Similarity=0.156 Sum_probs=167.8
Q ss_pred cCCeEEEEECCccCCCC-------C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCC-ccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSP-------Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR-YRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~-------~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G-~RvT~~~~l 168 (634)
+.+++|||+||++++++ + +++++++|+.+++.|+++|||||||+.+...... ..| .+.++.+.+
T Consensus 6 ~~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-------~~G~~~~~~~~~~ 78 (240)
T 4a7w_A 6 KNKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-------QGGIIRRTSGDYM 78 (240)
T ss_dssp CCCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC----------------CCCHHHHHHH
T ss_pred CCCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-------hcCCCCCCCHHHH
Confidence 46899999999999852 2 7899999999999999999999999877543211 123 233333333
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
+ ++++.+|..+++. .|+++|++ ++.+++.|.... .+.+|.+.+.++|
T Consensus 79 ~---~la~~~n~~l~~~--------~l~~~G~~----av~lt~~d~~~~------------------~~~~~~~~i~~lL 125 (240)
T 4a7w_A 79 G---MLATVINAVAMQE--------ALEHIGLD----TRVQSAIEIKEI------------------CESYIYRKAIRHL 125 (240)
T ss_dssp H---HHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCTTT------------------SEECCHHHHHHHH
T ss_pred H---HHHHHHHHHHHHH--------HHHHCCCC----EEEecHHHcCcc------------------cCcCcHHHHHHHH
Confidence 3 3567788887754 48999998 788887765321 1246888999999
Q ss_pred cCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhch
Q 006709 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 249 d~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~~ 321 (634)
+.|.|||+++. .|. .++|+|.+|+++|.+|+||+|+|+|||||+ | |++++|++++.+|+.+. +
T Consensus 126 ~~g~ipVi~~~----~g~-~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g-- 195 (240)
T 4a7w_A 126 EKGRVVIFGAG----TGN-PFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---D-- 195 (240)
T ss_dssp HTTCEEEEEST----TSC-TTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---S--
T ss_pred HCCCEEEEeCC----CCC-CCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---C--
Confidence 99999999982 233 369999999999999999999999999997 2 45789999998765421 1
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
.++ |
T Consensus 196 ------------------------------------------------------------------~~~---------m- 199 (240)
T 4a7w_A 196 ------------------------------------------------------------------IEV---------M- 199 (240)
T ss_dssp ------------------------------------------------------------------CCS---------S-
T ss_pred ------------------------------------------------------------------ccc---------c-
Confidence 012 6
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+++||..|++.|++ +||+|++.++.|+.++++++++||+|.
T Consensus 200 -~~~a~~~a~~~gv~-v~I~~g~~~~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 200 -DDTAISLAKDNKLP-IVVCNMFKKGNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp -CHHHHHHHHHTTCC-EEEEESSSTTHHHHHHHHSCSSCEEEC
T ss_pred -HHHHHHHHHHCCCe-EEEECCCCccHHHHHHCCCCCCceeeC
Confidence 47899999999996 999999999999988888889999973
|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=247.84 Aligned_cols=221 Identities=15% Similarity=0.139 Sum_probs=167.9
Q ss_pred CCeEEEEECCccCCCC--------ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~--------~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
.+++|||+||++++++ .++.++++|+.|++.|+++|||||||+++... +++++++.. +.+
T Consensus 7 ~k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~-----------~~~ 75 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRV-----------QAD 75 (252)
T ss_dssp CSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHH-----------HHH
T ss_pred CCEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCC-----------chH
Confidence 5899999999999963 17899999999999999999999999876544 677887642 122
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHc
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd 249 (634)
...+..+.+|..++.. .|.++|++ ++.+++.+...+. | ..++.+. +.+|+
T Consensus 76 ~~~~~~~~~~~~ll~~--------al~~~G~~----~~~~~~~~~~~~~----------~-------~~~~~~~-~~lL~ 125 (252)
T 1z9d_A 76 YTGMLGTVMNALVMAD--------SLQHYGVD----TRVQTAIPMQNVA----------E-------PYIRGRA-LRHLE 125 (252)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHTTTCC----EEEEESSCBTTTB----------E-------ECCHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHHcCCC----eEEEecccccccc----------C-------cchHHHH-HHHHh
Confidence 2233445666663332 47888987 6677665432111 0 1246555 89999
Q ss_pred CCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEee-cccccC-------CCCccccccCHHHHHHHHHhhch
Q 006709 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LT-DVdgld-------~~gklI~~ls~~e~~~li~~~~~ 321 (634)
.|.|||+++. .| ..|+|+|.+|+++|.+|+||+|+|+| ||||++ +++++|++++.+|+.+. +
T Consensus 126 ~g~IpVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---~-- 195 (252)
T 1z9d_A 126 KNRIVVFGAG----IG-SPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR---G-- 195 (252)
T ss_dssp TTCEEEEEST----TS-CTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---T--
T ss_pred CCCEEEEeCC----cC-CCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---c--
Confidence 9999999982 23 45899999999999999999999999 999972 35899999998765421 0
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
.|+ |
T Consensus 196 ------------------------------------------------------------------~~~---------m- 199 (252)
T 1z9d_A 196 ------------------------------------------------------------------LKI---------M- 199 (252)
T ss_dssp ------------------------------------------------------------------CCC---------S-
T ss_pred ------------------------------------------------------------------ccc---------c-
Confidence 122 7
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 449 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Ye 449 (634)
|+.||..|++.|++ ++|+|+..++.| .++|++++.||+|.++.|.
T Consensus 200 -k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~~~~~~ 244 (252)
T 1z9d_A 200 -DATASTLSMDNDID-LVVFNMNEAGNI-QRVVFGEHIGTTVSNKVCD 244 (252)
T ss_dssp -CHHHHHHHHHTTCE-EEEEETTSTTHH-HHHHTTCCCSEEEECC---
T ss_pred -CHHHHHHHHHcCCe-EEEEeCCCchHH-HHHHcCCCCceEEecCCCC
Confidence 78999999999997 999999999974 8899999999999999884
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=258.05 Aligned_cols=230 Identities=16% Similarity=0.164 Sum_probs=174.1
Q ss_pred HHHHHhhhHHHh--hcCCeEEEEECCccCCCCC---hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 006709 85 KWFREAWPYLWA--HRGGTFVVIISGEIVSSPY---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (634)
Q Consensus 85 ~~~r~a~pYi~~--~r~k~iVIKLGGsvL~~~~---l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G 159 (634)
+.|.++.||++. +..+++|||+||++++++. +++++++|+.|++. +++|||||||++.+. +.+++.+. |
T Consensus 20 ~~~~~~~~~~~~~~~m~~~iVIKlGGs~l~~~~~~~~~~la~~I~~l~~~-~~vVlVhGGg~~~~~-~~~~~~~~----g 93 (270)
T 2ogx_B 20 PQLQAAAAAAADFRILPDATVIKIGGQSVIDRGRAAVYPLVDEIVAARKN-HKLLIGTGAGTRARH-LYSIAAGL----G 93 (270)
T ss_dssp HHHHHHHHTSCCCCSSTTEEEEEECTTTTGGGCHHHHHHHHHHHHHHTTT-CEEEEEECCCHHHHH-HHHHHHHT----T
T ss_pred hhhhhhhcccchhhhccCeEEEEechHHhCCCCHHHHHHHHHHHHHHhcC-CcEEEEECChHHHHH-HHHHHHhc----C
Confidence 468999999977 4445999999999999742 89999999999876 999999999996643 44444332 2
Q ss_pred ccCCCHHHHHH-HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEE
Q 006709 160 YRITDSESLAA-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (634)
Q Consensus 160 ~RvT~~~~l~~-~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~ 238 (634)
. +...++. +++++|+.+..+.+. |.++|++ .++ .
T Consensus 94 ~---~~~~~~~~~~~a~G~~~l~~~~~---------l~~~G~~--------------~vt-------------------~ 128 (270)
T 2ogx_B 94 L---PAGVLAQLGSSVADQNAAMLGQL---------LAKHGIP--------------VVG-------------------G 128 (270)
T ss_dssp C---CHHHHHHHHHHHHHHHHHHHHHH---------HGGGTCC--------------BCC-------------------S
T ss_pred C---ChHHHHHHHHHHHHHHHHHHHHH---------HHhcCCc--------------eec-------------------H
Confidence 2 3444444 467889888777554 5667764 111 1
Q ss_pred ecHHHHHHHHcCCcEEEEcCCc-cC------CCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccc
Q 006709 239 VDVTRMRERLDGGCLVILSNLG-YS------SSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLI 304 (634)
Q Consensus 239 vd~~~I~~LLd~G~IPVv~~v~-~~------~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI 304 (634)
.|.+.|+++|++|.|||++++. ++ ..|+..++|+|.+|+++|.+|+||+|+|+|||||+ | |++++|
T Consensus 129 ~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i 208 (270)
T 2ogx_B 129 AGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFI 208 (270)
T ss_dssp STTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEE
T ss_pred hhHHHHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEc
Confidence 2344699999999999999873 22 23556789999999999999999999999999997 2 358999
Q ss_pred cccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCccccc
Q 006709 305 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQ 384 (634)
Q Consensus 305 ~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~ 384 (634)
++++.+|++++...+ +.+
T Consensus 209 ~~i~~~e~~~~~~~g---------------------------------------------------~~~----------- 226 (270)
T 2ogx_B 209 PRISVDEMKAKGLHD---------------------------------------------------SIL----------- 226 (270)
T ss_dssp SEEEHHHHHHTTCCC---------------------------------------------------TTS-----------
T ss_pred ceeCHHHHHHHhcCC---------------------------------------------------Ccc-----------
Confidence 999998877654211 001
Q ss_pred ccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 385 GFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 385 ~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
. || |.+|+++|. .++ ++||+|++.++.| .++|++++.||+|.+
T Consensus 227 --~-gg---------m~~kl~aa~----~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 227 --E-FP---------VLDLLQSAQ----HVR-EVQVVNGLVPGNL-TRALAGEHVGTIITA 269 (270)
T ss_dssp --C-HH---------HHHHHHHCS----SCC-EEEEEETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred --c-HH---------HHHHHHHhh----cCC-cEEEEeCCCchHH-HHHHcCCCCCeEecC
Confidence 1 34 999999985 345 6999999999985 889999999999975
|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=243.63 Aligned_cols=207 Identities=18% Similarity=0.117 Sum_probs=159.8
Q ss_pred CeEEEEECCccCCC--CChHHHHHHHHHHHhCCCeEEEEeCchHHHHH---HHHHcCCcccccCCccCCCHHHHHHHHHH
Q 006709 100 GTFVVIISGEIVSS--PYLDPILKDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAAAMEA 174 (634)
Q Consensus 100 k~iVIKLGGsvL~~--~~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~---~l~~lg~~~~~~~G~RvT~~~~l~~~~~a 174 (634)
+++|||+||+++++ +.+++++++|+.|++ |+++|||||||++++. .++++++ +..+++...++
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~~i~~l~~-g~~vvlV~ggG~~~~~~~~~~~~~g~-----------~~~~l~~~~~~ 68 (219)
T 2ij9_A 1 MKVVLSLGGSVLSNESEKIREFAKTIESVAQ-QNQVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIA 68 (219)
T ss_dssp CEEEEEECSSTTTTCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHH
T ss_pred CeEEEEeChhhhCChHHHHHHHHHHHHHHcC-CCEEEEEECcchHhcchHHHHHHcCC-----------CccchHHHHHH
Confidence 47999999999998 348999999999998 9999999999999998 5777776 34667776556
Q ss_pred HhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEE
Q 006709 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (634)
Q Consensus 175 ~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IP 254 (634)
.+.+|..+++.+ |..+ +. + ..++.+.|+.+|+.|.||
T Consensus 69 ~~~~~~~l~~~~--------~~~~-~~------------------~----------------~~~~~~~i~~ll~~g~ip 105 (219)
T 2ij9_A 69 ATRLNAMLLISA--------IPSA-AK------------------K----------------VPVDFMEAEELSKLYRVV 105 (219)
T ss_dssp HHHHHHHHHHHH--------CTTB-CS------------------S----------------CCSSHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHH--------HHHh-cC------------------C----------------CcCCHHHHHHHHHCCCEE
Confidence 778887777754 2111 11 0 125778899999999999
Q ss_pred EEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---CC----CCccccccCHHHHHHHHHhhchhhhhHH
Q 006709 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---DE----SGHLIRFLTLQEADSLIRQRVKQSEIAA 327 (634)
Q Consensus 255 Vv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d~----~gklI~~ls~~e~~~li~~~~~~~~~~~ 327 (634)
|+++ |..++ |+|.+|+++|.+|+||+|+|+|||||+ || ++++|++++.+|+.+++...
T Consensus 106 Vi~~------g~~~~-~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~-------- 170 (219)
T 2ij9_A 106 VMGG------TFPGH-TTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRS-------- 170 (219)
T ss_dssp EECC------CSSSS-CTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC---------
T ss_pred EEeC------CCCCC-CchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcC--------
Confidence 9999 34455 999999999999999999999999997 23 68999999999887764320
Q ss_pred HHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHH
Q 006709 328 NYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAA 407 (634)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA 407 (634)
+ +.+|| |.+|..+|
T Consensus 171 --------------------------------------------g-------------~~~g~---------~~~~~~~a 184 (219)
T 2ij9_A 171 --------------------------------------------S-------------AKAGT---------NVVIDLLA 184 (219)
T ss_dssp -------------------------------------------------------------CC---------CCCSCHHH
T ss_pred --------------------------------------------C-------------CCCCC---------ccchHHHH
Confidence 0 11233 55555566
Q ss_pred HHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 408 AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 408 ~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
..+++.++.++||+|+ .++.| .++|++++.||+|.
T Consensus 185 ~~~~~~~~~~v~I~~g-~~~~l-~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 185 AKIIERSKIKTYVILG-TPENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHHHTCCEEEEEC-CHHHH-HHHHTTCCCSEEEC
T ss_pred HHHHHHCCCeEEEEEC-CHhHH-HHHHcCCCCCeEeC
Confidence 6666655556999999 99985 78999999999874
|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=250.91 Aligned_cols=211 Identities=14% Similarity=0.062 Sum_probs=161.9
Q ss_pred CCeEEEEECCccCCCC----C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHH---HHHHcCCcccccCCccCCCHHHHHH
Q 006709 99 GGTFVVIISGEIVSSP----Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDK---LLSERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~----~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~---~l~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
.+++|||+||++++++ + ++.++++|+.|++ |+++|||||||++++. .++++++ +...++.
T Consensus 19 ~k~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~-g~~vViV~GgG~~~~~~~~~~~~~gl-----------~~~~~~~ 86 (244)
T 2brx_A 19 HMRIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNS-----------SETFKDF 86 (244)
T ss_dssp CCEEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTC-----------CHHHHHH
T ss_pred ccEEEEEechhhcCCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECccHHHhchHHHHHHcCC-----------CcccHHH
Confidence 4789999999999853 2 7899999999999 9999999999999988 3556555 3455665
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
..++...+|..+++. .|.++|++ + ..++.+.+.++|+.
T Consensus 87 ~~~~~~~~~~~l~~~--------~l~~~g~~----~------------------------------~~~~~~~i~~lL~~ 124 (244)
T 2brx_A 87 IGIQITRANAMLLIA--------ALREKAYP----V------------------------------VVEDFWEAWKAVQL 124 (244)
T ss_dssp HHHHHHHHHHHHHHH--------HHGGGBCS----S------------------------------CBCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH--------HHHHcCCC----C------------------------------CcCCHHHHHHHHhC
Confidence 544566777777653 36777754 1 02366788999999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhchhh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|.|||+++ |..++ |+|.+|+++|.+|+||+|+|+|||||+ | |++++|++++.+|+.+++...
T Consensus 125 g~IpVi~g------g~~~~-~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~---- 193 (244)
T 2brx_A 125 KKIPVMGG------THPGH-TTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKG---- 193 (244)
T ss_dssp TCBCEECC------CSTTC-CHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC-----
T ss_pred CCEEEEcC------CCCCC-CchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhcc----
Confidence 99999999 33344 999999999999999999999999997 2 369999999999988776431
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
++..|| |.+|
T Consensus 194 -------------------------------------------------------------g~~~g~---------m~~~ 203 (244)
T 2brx_A 194 -------------------------------------------------------------IEKAGS---------SSVI 203 (244)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -------------------------------------------------------------CCCCCC---------Ccch
Confidence 012233 6666
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
..+|..+++.++.+++|+||+.++.| .++|++++.||+|.+
T Consensus 204 ~~~A~~~~~~~~~~v~I~ng~~~~~l-~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 204 DPLAAKIIARSGIKTIVIGKEDAKDL-FRVIKGDHNGTTIEP 244 (244)
T ss_dssp CHHHHHHHHHHTCCEEEECHHHHTCH-HHHHTTCSSSEEECC
T ss_pred HHHHHHHHHHCCCeEEEEeCCChhHH-HHHHcCCCCceEecC
Confidence 66777777755557999999999985 789999999999863
|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=245.07 Aligned_cols=222 Identities=11% Similarity=0.068 Sum_probs=163.8
Q ss_pred hHHHhh-cCCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCcc
Q 006709 92 PYLWAH-RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYR 161 (634)
Q Consensus 92 pYi~~~-r~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~R 161 (634)
||...+ +.+++|||+||++++++. ++.++++|+.|+ .|+++|||||||+++... +++++++..
T Consensus 16 ~~~~~~~~~k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~~~~~g~~~~------ 88 (256)
T 2va1_A 16 PRGSHMMRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNIWRGSIAKELDMDRN------ 88 (256)
T ss_dssp -------CCSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTTCCHHHHHHTTCCHH------
T ss_pred chhhhhhhcCEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHHhccchHHHcCCCCC------
Confidence 444444 358999999999999641 789999999998 899999999999987665 778887642
Q ss_pred CCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecH
Q 006709 162 ITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV 241 (634)
Q Consensus 162 vT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~ 241 (634)
..+...+.++.+|..++.. .|.++|++ ++++++.+... +. . ..++.
T Consensus 89 -----~~~~~~~l~~~~n~~l~~~--------~l~~~Gi~----a~~~~~~t~~~-------------~~---~-~~~~~ 134 (256)
T 2va1_A 89 -----LADNMGMMATIINGLALEN--------ALNHLNVN----TIVLSAIKCDK-------------LV---H-ESSAN 134 (256)
T ss_dssp -----HHHHHHHHHHHHHHHHHHH--------HHHTTTCC----EEEEESSCCTT-------------TC---E-ECCHH
T ss_pred -----chhHHHHHHHHHHHHHHHH--------HHHHcCCC----eEEEeeeeccc-------------cc---c-hhhHH
Confidence 1122234445667666332 47889987 66666544211 11 0 13556
Q ss_pred HHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeec-ccccC-------CCCccccccCHHHHH
Q 006709 242 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEAD 313 (634)
Q Consensus 242 ~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTD-Vdgld-------~~gklI~~ls~~e~~ 313 (634)
+. ..+|+.|.|||+++ .+| ..++|+|.+|+++|.+|+||+|+|+|| |||++ |++++|++++.+|++
T Consensus 135 ~~-~~lL~~g~IpVi~~----~~g-~~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~ 208 (256)
T 2va1_A 135 NI-KKAIEKEQVMIFVA----GTG-FPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMAL 208 (256)
T ss_dssp HH-HHHHHTTCEEEEES----TTS-SSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHH
T ss_pred HH-HHHHhCCcEEEEEC----CCC-CCCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHH
Confidence 66 78999999999998 223 346899999999999999999999999 99973 358999999998876
Q ss_pred HHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccc
Q 006709 314 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 393 (634)
Q Consensus 314 ~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~ 393 (634)
++ +. ||
T Consensus 209 ~~---~~--------------------------------------------------------------------~~--- 214 (256)
T 2va1_A 209 TQ---NL--------------------------------------------------------------------KV--- 214 (256)
T ss_dssp HH---TC--------------------------------------------------------------------CS---
T ss_pred Hh---cc--------------------------------------------------------------------CC---
Confidence 54 10 22
Q ss_pred cccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 394 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 394 ~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
| |++||..|++.|++ ++|+|+..++.| .++|++++.||+|.
T Consensus 215 ------m--k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 215 ------M--DATALALCQENNIN-LLVFNIDKPNAI-VDVLEKKNKYTIVS 255 (256)
T ss_dssp ------S--CHHHHHHHHHTTCE-EEEEESSSTTHH-HHHHTTCSCEEEEE
T ss_pred ------c--cHHHHHHHHHCCCe-EEEEeCCCchHH-HHHHcCCCCeEEEe
Confidence 8 89999999999997 999999999985 68999989999985
|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=236.77 Aligned_cols=217 Identities=15% Similarity=0.107 Sum_probs=165.7
Q ss_pred CCeEEEEECCccCCCC-----C---hHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSP-----Y---LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~-----~---l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
.+++|||+||++++++ + +++++++|+.|++.|+++|||||||+++... +++++++.. +.+
T Consensus 7 ~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~~~~~-----------~~~ 75 (239)
T 1ybd_A 7 YKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRA-----------TAD 75 (239)
T ss_dssp CSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSCHH-----------HHH
T ss_pred CCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcCCCCc-----------cHH
Confidence 5899999999999864 2 7899999999999999999999999987766 577777542 222
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHc
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd 249 (634)
...+....+|..++.. .|.++|++ +..+++.+...+. . ..++.+.+ ++|+
T Consensus 76 ~~~~~~~~~~~~l~~~--------~l~~~G~~----~~~~~~~~~~~~~---------------~--~~~~~~~~-~ll~ 125 (239)
T 1ybd_A 76 YMGMMATVMNALALKD--------AFETLGIK----ARVQSALSMQQIA---------------E--TYARPKAI-QYLE 125 (239)
T ss_dssp HHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCBSSSC---------------E--ECCHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHH--------HHHHcCCC----eEEEeeecccccc---------------c--chhHHHHH-HHHh
Confidence 2333445566664332 47889987 6666665532211 0 12456777 8999
Q ss_pred CCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchh
Q 006709 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~ 322 (634)
.|.|||+++. .| ..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 126 ~g~ipVv~g~----~g-~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-- 195 (239)
T 1ybd_A 126 EGKVVIFAAG----TG-NPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NL-- 195 (239)
T ss_dssp TTCEEEEEST----TS-STTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TC--
T ss_pred CCcEEEEECC----cc-CCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cc--
Confidence 9999999832 22 34699999999999999999999999999972 45789999998876532 11
Q ss_pred hhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHH
Q 006709 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (634)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~ 402 (634)
++ |
T Consensus 196 ------------------------------------------------------------------~~---------m-- 198 (239)
T 1ybd_A 196 ------------------------------------------------------------------KV---------M-- 198 (239)
T ss_dssp ------------------------------------------------------------------CS---------S--
T ss_pred ------------------------------------------------------------------cc---------c--
Confidence 12 6
Q ss_pred HHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 403 Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|+.||..|++.|++ ++|+|+..++.| .++|++++.||+|.+
T Consensus 199 ~~~a~~~a~~~gv~-v~I~~~~~~~~l-~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 199 DATAFALCRERKLN-IVVFGIAKEGSL-KRVITGEDEGTLVHC 239 (239)
T ss_dssp CHHHHHHHHHTTCC-EEEECTTSTTHH-HHHHHTCSCSEEEEC
T ss_pred CHHHHHHHHHcCCc-EEEEeCCChhHH-HHHHcCCCCCeEEcC
Confidence 57799999999998 999999999985 589999999999853
|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=239.07 Aligned_cols=218 Identities=18% Similarity=0.135 Sum_probs=165.3
Q ss_pred cCCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHH-HHHHHHHcCCcccccCCccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQ-IDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~-I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+.+++|||+||++|++++ +++++++|+.+++.|+++|||||||+. .+..+.++|++. ...
T Consensus 8 ~~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~-----------~~~ 76 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDR-----------VTG 76 (243)
T ss_dssp SCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCH-----------HHH
T ss_pred cCcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCC-----------CCH
Confidence 468999999999999752 789999999999999999999998764 233344444432 222
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
+....+.+.+|..++.. +|.++|++ ++.+++.+...+ ...++.+.+..+|
T Consensus 77 d~~g~l~t~~N~~~l~~--------al~~~G~~----a~~~~~~~~~~v------------------~~~~~~~~~~~lL 126 (243)
T 3ek6_A 77 DHMGMLATVINALAMQD--------ALEKLGAK----VRVMSAIKINDV------------------CEDFIRRRAIRHL 126 (243)
T ss_dssp HHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCBTTT------------------BEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--------HHHHcCCC----eEEechhhcCcc------------------cCcCCHHHHHHHH
Confidence 22223455777663332 47899987 777776653211 1235678899999
Q ss_pred cCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhch
Q 006709 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 249 d~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~ 321 (634)
++|.|||+++. +| ..++|+|.+|+++|.+|+||+|+++|||||++ |++++|++++.+|+.+ .+.
T Consensus 127 ~~g~IpVv~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~- 197 (243)
T 3ek6_A 127 EKGRIAIFAAG----TG-NPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM---QGL- 197 (243)
T ss_dssp HTTCEEEEEST----TS-STTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH---HTC-
T ss_pred HCCcEEEEECC----CC-CCcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh---CCc-
Confidence 99999999982 23 23599999999999999999999999999972 4688999999887543 111
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
++ |
T Consensus 198 -------------------------------------------------------------------~~---------~- 200 (243)
T 3ek6_A 198 -------------------------------------------------------------------EV---------M- 200 (243)
T ss_dssp -------------------------------------------------------------------CS---------S-
T ss_pred -------------------------------------------------------------------hh---------H-
Confidence 01 4
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|+.||..|++.|++ +||+|++.++. |.++|++++.||+|.+
T Consensus 201 -~~~a~~~a~~~gv~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 201 -DTAAFALARDSDLP-LRIFGMSEPGV-LLRILHGAQIGTLVQG 241 (243)
T ss_dssp -CHHHHHHHHHTTCC-EEEECCCSTTH-HHHHHTTCCCSEEECC
T ss_pred -HHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHCCCCCceEEee
Confidence 58899999999997 99999999998 5599999999999975
|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-27 Score=237.71 Aligned_cols=219 Identities=17% Similarity=0.101 Sum_probs=166.3
Q ss_pred cCCeEEEEECCccCCCC-------C-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSP-------Y-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~-------~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+++++|||+||++++++ + +++++++|+.|++.|+++|||||||+++... +++++++.. +.
T Consensus 7 ~~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~-----------~~ 75 (247)
T 2a1f_A 7 IYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRV-----------VG 75 (247)
T ss_dssp SCSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHH-----------HH
T ss_pred cccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCC-----------cH
Confidence 36899999999999953 1 7899999999999999999999999886554 567776542 22
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
+...+..+.+|..++.. .|.++|++ +..+++.+...+. . ..++.+ ++++|
T Consensus 76 d~~~~~~~~~~~~ll~~--------~l~~~G~~----~~~~~~~~~~~~~-----------~------~~~~~~-~~~ll 125 (247)
T 2a1f_A 76 DHMGMLATVMNGLAMRD--------SLFRADVN----AKLMSAFQLNGIC-----------D------TYNWSE-AIKML 125 (247)
T ss_dssp HHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCTTTS-----------E------ECCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHH--------HHHHcCCC----eEEeccccccccc-----------c------hhhHHH-HHHHH
Confidence 33344555667663332 47889987 6677766542211 0 124545 47899
Q ss_pred cCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhch
Q 006709 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 249 d~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~ 321 (634)
+.|.|||+++. .| ..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++.+|+.++ +.
T Consensus 126 ~~g~ipVi~~~----~g-~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~- 196 (247)
T 2a1f_A 126 REKRVVIFSAG----TG-NPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---EL- 196 (247)
T ss_dssp HTTCEEEEEST----TS-CSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TC-
T ss_pred hCCCEEEEeCC----cC-CCCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---Cc-
Confidence 99999999982 23 35699999999999999999999999999972 35899999998876542 11
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
++ |
T Consensus 197 -------------------------------------------------------------------~~---------m- 199 (247)
T 2a1f_A 197 -------------------------------------------------------------------KV---------M- 199 (247)
T ss_dssp -------------------------------------------------------------------CS---------S-
T ss_pred -------------------------------------------------------------------cc---------c-
Confidence 12 6
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|+.||..|++.|++ ++|+|+..++. |.++++++..||.|...
T Consensus 200 -~~~aa~~a~~~gv~-v~I~~~~~~~~-l~~~l~g~~~GT~~~~~ 241 (247)
T 2a1f_A 200 -DLSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTICEG 241 (247)
T ss_dssp -CHHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEECCC
T ss_pred -CHHHHHHHHHcCCc-EEEEeCCCchH-HHHHHcCCCCceEEeec
Confidence 57799999999998 99999999997 56788899999999653
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=238.38 Aligned_cols=216 Identities=16% Similarity=0.180 Sum_probs=159.5
Q ss_pred CCeEEEEECCccCCCCC-------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHH-HHcCCcccccCCccCCCHHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY-------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLL-SERGHEAKYLGRYRITDSESLAA 170 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l-~~lg~~~~~~~G~RvT~~~~l~~ 170 (634)
.++||||+||++|++++ +.+++++|+.+++.|++||||||||..+.... ..++++ .++...++
T Consensus 50 ~krIViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~--------~~~~d~~g- 120 (281)
T 3nwy_A 50 YSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGME--------RTRSDYMG- 120 (281)
T ss_dssp CSEEEEEECGGGGGTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCC--------HHHHHHHH-
T ss_pred CcEEEEEEchhhccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCC--------ccchhHHH-
Confidence 58999999999999642 78999999999999999999999876543221 112222 12222232
Q ss_pred HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcC
Q 006709 171 AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG 250 (634)
Q Consensus 171 ~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~ 250 (634)
++...+|..+... .|.++|++ ++.+++.+.+.+. + ..++.+.+ ++|++
T Consensus 121 --~lat~~n~~~l~~--------~L~~~Gi~----a~~~~~~~~~~~~-~----------------~~~~~~~l-~lL~~ 168 (281)
T 3nwy_A 121 --MLGTVMNSLALQD--------FLEKEGIV----TRVQTAITMGQVA-E----------------PYLPLRAV-RHLEK 168 (281)
T ss_dssp --HHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCCGGGS-E----------------ECCHHHHH-HHHHT
T ss_pred --HHHHHHHHHHHHH--------HHHHcCCC----EEEEecccccccc-c----------------ccchHHHH-HHHHc
Confidence 2344556544433 58999998 6666666554332 1 23566777 79999
Q ss_pred CcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhh
Q 006709 251 GCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 251 G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
|.|||+++. +| ..++|+|.+|+++|.+|+||+|+|+|||||++ |++++|++++..|+.+ .
T Consensus 169 g~IpVv~g~----~g-~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~---~----- 235 (281)
T 3nwy_A 169 GRVVIFGAG----MG-LPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD---R----- 235 (281)
T ss_dssp TCEEEEEST----TS-STTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT---T-----
T ss_pred CCeEEEECC----CC-CCCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH---c-----
Confidence 999999982 22 34699999999999999999999999999972 3578999999876421 0
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
| + |..|
T Consensus 236 ----------------------------------------------------g-~---------------------~v~k 241 (281)
T 3nwy_A 236 ----------------------------------------------------G-L---------------------RVAD 241 (281)
T ss_dssp ----------------------------------------------------T-C---------------------CSSC
T ss_pred ----------------------------------------------------C-C---------------------CcHH
Confidence 0 1 4557
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+.||..|++.|++ ++|+|++.++. |.++|++++.||+|.
T Consensus 242 ~~Aa~~a~~~Gi~-v~I~~g~~p~~-l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 242 ATAFSLCMDNGMP-ILVFNLLTDGN-IARAVRGEKIGTLVT 280 (281)
T ss_dssp HHHHHHHHTTTCC-EEEEETTSTTH-HHHHHHTCCCSEEEC
T ss_pred HHHHHHHHHCCCe-EEEecCCCchH-HHHHHcCCCCceEEe
Confidence 8999999999997 99999999997 559999999999985
|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-26 Score=248.63 Aligned_cols=258 Identities=19% Similarity=0.219 Sum_probs=178.3
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeC-chHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPG-THVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHG-GG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G 176 (634)
++++|+|+||+++++++ +++++++|+.+++.|+++||||| +|++++.+++..+.... + .+...++++. +.|
T Consensus 1 m~~iViK~GGssl~~~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~-----~-~~~~~~d~~~-a~G 73 (421)
T 3ab4_A 1 MALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNP-----V-PPAREMDMLL-TAG 73 (421)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCS-----S-CCHHHHHHHH-HHH
T ss_pred CCeEEEEEChhHhCCHHHHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhcc-----C-CCHHHHHHHH-HHH
Confidence 47899999999999855 89999999999999999999996 78898888876543221 2 2567788775 446
Q ss_pred H-HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 177 G-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 177 ~-in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
+ ++..+... .|+++|++ ++.+++.+..+++.++ ++ .+++..++.+.|+.+|+.|.|||
T Consensus 74 e~~~~~ll~~--------~L~~~G~~----a~~l~~~~~~~~t~~~--------~~-~~~v~~~~~~~i~~~l~~g~ipV 132 (421)
T 3ab4_A 74 ERISNALVAM--------AIESLGAE----AQSFTGSQAGVLTTER--------HG-NARIVDVTPGRVREALDEGKICI 132 (421)
T ss_dssp HHHHHHHHHH--------HHHHTTCC----EEECCCC--------------------------CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHH--------HHHHCCCC----eEEEehhhceEEeccC--------CC-CeeechhhHHHHHHHHhCCCEEE
Confidence 5 77765544 47899998 7888887766666553 22 47888899999999999999999
Q ss_pred EcCC-ccCCC-Cceeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhchhh
Q 006709 256 LSNL-GYSSS-GEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRVKQS 323 (634)
Q Consensus 256 v~~v-~~~~~-Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~~~~ 323 (634)
+++. +.+.+ |++.++ ++|.+|+.+|.+|+||+|+++|||||+ | +++++|++++.+|+.++...+.
T Consensus 133 v~g~~g~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~Ga--- 209 (421)
T 3ab4_A 133 VAGFQGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGS--- 209 (421)
T ss_dssp C------------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTTC---
T ss_pred EeCCcCcCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcCC---
Confidence 9997 77888 888888 999999999999999999999999997 3 3699999999999998864321
Q ss_pred hhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHH
Q 006709 324 EIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSE 403 (634)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~K 403 (634)
+..|
T Consensus 210 ----------------------------------------------------------------------------~v~~ 213 (421)
T 3ab4_A 210 ----------------------------------------------------------------------------KILV 213 (421)
T ss_dssp ----------------------------------------------------------------------------CSSC
T ss_pred ----------------------------------------------------------------------------cCch
Confidence 2235
Q ss_pred HHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccc----cc--cccCc------------cchHHH-HHH
Q 006709 404 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY----EG--TRTAK------------VTDLSG-IKQ 464 (634)
Q Consensus 404 l~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Y----e~--iR~a~------------~~D~~~-i~~ 464 (634)
+.|+..|++.|++ ++|.|+..+ +.||+|.++++ +. +|.++ ..|.+. +.+
T Consensus 214 ~~a~~~a~~~gi~-v~I~n~~~~-----------~~GT~I~~~~~~~~~~~~~i~~i~~~~~~~~i~v~~~~~~~g~~~~ 281 (421)
T 3ab4_A 214 LRSVEYARAFNVP-LRVRSSYSN-----------DPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAK 281 (421)
T ss_dssp HHHHHHHHHTTCC-EEEEESSSC-----------CCCEEECSCGGGSCTTTCCCCEEEEECSEEEEEEEEEESSTTHHHH
T ss_pred HHHHHHHHHcCCC-EEEecCcCC-----------CCCeEEEecCcccccccCccceEEeeCCEEEEEEeccCCcccHHHH
Confidence 6799999999998 899998654 68999988744 22 55544 233333 446
Q ss_pred hHHHHHHcccC
Q 006709 465 IIQPLVESGAL 475 (634)
Q Consensus 465 l~~~~~~~~~~ 475 (634)
+|..+.+.+..
T Consensus 282 If~~La~~~I~ 292 (421)
T 3ab4_A 282 VFRALADAEIN 292 (421)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCc
Confidence 77777666554
|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=225.14 Aligned_cols=219 Identities=17% Similarity=0.195 Sum_probs=160.6
Q ss_pred cCCeEEEEECCccCCCC--------ChHHHHHHHHHHHhCCCeEEEEeCchHHHHHH-HHHcCCcccccCCccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSP--------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKL-LSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~--------~l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~-l~~lg~~~~~~~G~RvT~~~~l 168 (634)
+++++|||+||++++++ .+++++++|+.+++.|+++|||||||+++... +++++++.. +.+.+
T Consensus 11 ~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~~~~~~~~~g~~~~--------~~~~~ 82 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGIDRV--------EADNI 82 (255)
T ss_dssp BCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHTTCCHH--------HHHHH
T ss_pred cCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHHhhhHHHHcCCCCC--------ChHHH
Confidence 46899999999999974 27899999999999999999999999987444 667776531 22333
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHh-cCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRR-HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~-~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~L 247 (634)
+ +....+|..++.. .|.+ +|++ +..+++.+...++ + .++...+..+
T Consensus 83 ~---~~~~~~~~~ll~~--------~l~~~~Gi~----a~~l~~~~~~~v~----------------~--~~~~~~~~~l 129 (255)
T 2jjx_A 83 G---TLGTIINSLMLRG--------VLTSKTNKE----VRVMTSIPFNAVA----------------E--PYIRLRAVHH 129 (255)
T ss_dssp H---HHHHHHHHHHHHH--------HHHHHCSSC----EEEEESSCCCSSS----------------E--ECCHHHHHHH
T ss_pred h---HHHHHHHHHHHHH--------HHHhhcCCc----eEEecHHHcCccc----------------C--cccHHHHHHH
Confidence 3 2334566663332 4788 9998 6677766543221 1 2244344489
Q ss_pred HcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEee-cccccC-------CCCccccccCHHHHHHHHHhh
Q 006709 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQR 319 (634)
Q Consensus 248 Ld~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LT-DVdgld-------~~gklI~~ls~~e~~~li~~~ 319 (634)
|+.|.|||+++ + +|. .++++|.+|+++|.+|+||+|+|+| ||||++ |++++|++++.+|+.++ +
T Consensus 130 L~~g~IpVi~g-g---~g~-~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G 201 (255)
T 2jjx_A 130 LDNGYIVIFGG-G---NGQ-PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---N 201 (255)
T ss_dssp HHTTCEEEEES-T---TSC-SSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---T
T ss_pred HhCCcEEEEeC-C---CCC-CccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---C
Confidence 99999999998 2 333 3578899999999999999999999 999972 35899999997665432 1
Q ss_pred chhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccC
Q 006709 320 VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 399 (634)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~ 399 (634)
. |+
T Consensus 202 ~--------------------------------------------------------------------~~--------- 204 (255)
T 2jjx_A 202 I--------------------------------------------------------------------QV--------- 204 (255)
T ss_dssp C--------------------------------------------------------------------CS---------
T ss_pred C--------------------------------------------------------------------cc---------
Confidence 1 22
Q ss_pred CHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 400 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 400 m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+ .|+..+.+.|++ ++|+|+..++.| .+++++++.||+|.++
T Consensus 205 m~~--~a~~~a~~~gi~-v~I~~~~~~~~l-~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 205 MDQ--AALLLARDYNLP-AHVFNFDEPGVM-RRICLGEHVGTLINDD 247 (255)
T ss_dssp SCH--HHHHHHHHHTCC-EEEEETTSTTHH-HHHHBTCCCSEEEESS
T ss_pred CHH--HHHHHHHHcCCe-EEEEeCCCchHH-HHHhcCCCCceEEecC
Confidence 653 344444458997 999999999984 5677888999999874
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=183.18 Aligned_cols=149 Identities=35% Similarity=0.698 Sum_probs=137.2
Q ss_pred cccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 447 ~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
+|++||+++++|++.+.+++..+....+..+++.+.+.+.+..++|++.+|++||++.+.+......++|..++|+|+||
T Consensus 2 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~~~V~p~~r 81 (150)
T 3e0k_A 2 NAEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYR 81 (150)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHTTCC-CCCHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEECGGGC
T ss_pred chheeecCCHhhHHHHHHHHHHHhhcccccccCHHHHHHHHHheEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHh
Confidence 57889999999999999999988888888888999999999999999999999999999977667789999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccccchhHhhhh
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKR 606 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~~~~~~~~~~ 606 (634)
|||+|++|+ +.+++.+++.|+..+++.+.++.+||+++||+.++...+|...+..
T Consensus 82 g~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~n~~a~~~y~k~GF~~~~~~~~~~~~~~~ 136 (150)
T 3e0k_A 82 DGNRGLLLL-------------------------NYMKHRSKSENINQIFVLTTHSLHWFREQGFYEVGVDYLPGAKQGL 136 (150)
T ss_dssp SSSHHHHHH-------------------------HHHHHHHHTTTCCEEECCCSSCHHHHHHHTCCCCCGGGSCGGGHHH
T ss_pred ccCHHHHHH-------------------------HHHHHHHHHCCCcEEEEecHHHHHHHHHcCCeecCcccChHHHHhh
Confidence 999999999 8999999999999999998889999999999999999999999999
Q ss_pred ccCCCCceEEEeec
Q 006709 607 INLSRNSKYYMKKL 620 (634)
Q Consensus 607 ~~~~~~s~~~~k~l 620 (634)
|++.+++++++|+|
T Consensus 137 ~~~~~~~~v~~k~l 150 (150)
T 3e0k_A 137 YNFQRKSKILALDL 150 (150)
T ss_dssp HTC-CCCCCCCCCC
T ss_pred cCcccCccchhccC
Confidence 99999999999876
|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=219.32 Aligned_cols=190 Identities=17% Similarity=0.188 Sum_probs=141.5
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCc-hHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHHh
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGT-HVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAG 176 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGG-G~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~G 176 (634)
|+++|+|+||+.+.+++ +++++++|+.+++.|+++|||||| |...+.+++... .+. .|+ +...++++. +.|
T Consensus 1 m~~iViK~GGssl~~~~~i~~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~---~~~--~~~-~~~~~d~l~-s~G 73 (600)
T 3l76_A 1 MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQ---QIS--PNP-CRREMDMLL-STG 73 (600)
T ss_dssp -CEEEEEECSGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHH---HHC--SSC-CHHHHHHHH-HHH
T ss_pred CceEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHH---hhc--cCC-CHHHHHHHH-HHh
Confidence 47899999999999876 889999999999999999999999 887776654211 111 122 456677653 445
Q ss_pred H-HHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 177 G-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 177 ~-in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
+ ++..+++. .|+++|++ ++.+++.+..+++.... + .+++..++.+.|+.+|+.|.|||
T Consensus 74 e~~s~~l~~~--------~l~~~G~~----a~~l~~~~~~l~~~~~~--------~-~~~~~~~~~~~i~~ll~~g~IpV 132 (600)
T 3l76_A 74 EQVSIALLSL--------ALQEIDQP----AISLTGAQVGIVTEAEH--------S-RARILEIRPDRLEHHLREGKVVV 132 (600)
T ss_dssp HHHHHHHHHH--------HHHHTTCC----EEEEEGGGTEEEEC----------------CCEEEECCHHHHHTTTCEEE
T ss_pred HHHHHHHHHH--------HHHhCCCC----eEEechhHcceEEecCC--------C-CceeccccHHHHHHHHhCCCEEE
Confidence 4 77777765 48999998 89999888766654321 1 34556677789999999999999
Q ss_pred EcC-CccCCCC--ceee---echHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHH
Q 006709 256 LSN-LGYSSSG--EVLN---CNTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 256 v~~-v~~~~~G--ei~n---id~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li 316 (634)
+++ .+.+.+| .+.+ .++|.+|+.+|.+|+||+|+++|||||+ | +++++|++++.+|+.++.
T Consensus 133 v~Gf~g~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela 206 (600)
T 3l76_A 133 VAGFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELA 206 (600)
T ss_dssp EECEEEC----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTG
T ss_pred EECCeecCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHH
Confidence 986 4667777 3333 2589999999999999999999999997 3 368999999999887764
|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=175.24 Aligned_cols=192 Identities=18% Similarity=0.183 Sum_probs=130.0
Q ss_pred CCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc---------c--------cCCc
Q 006709 99 GGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK---------Y--------LGRY 160 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~---------~--------~~G~ 160 (634)
++++|.|+||+.+.+.+ ++++++-|. +...++|+|+|+..-++..|-++..... . .+..
T Consensus 2 m~~~V~KFGGTSv~~~e~i~~va~ii~---~~~~~~vVVvSA~g~~Td~L~~~~~~~~~~~~~~~i~~i~~~~~~i~~~l 78 (449)
T 2j0w_A 2 SEIVVSKFGGTSVADFDAMNRSADIVL---SDANVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERL 78 (449)
T ss_dssp -CCEEEEECSGGGSSHHHHHHHHHHHT---SCTTEEEEEECCCTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccEEEEECCccCCCHHHHHHHHHHHH---hcCCCEEEEeCCCCchHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHh
Confidence 57899999999998865 566665553 2344889999986666665554432200 0 0000
Q ss_pred c-------------------------CCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCC
Q 006709 161 R-------------------------ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASG 214 (634)
Q Consensus 161 R-------------------------vT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg 214 (634)
. ...+..+|.+. +.|+. +..++.. .|+++|++ ++.+++.+.
T Consensus 79 ~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~l~-s~Ge~~s~~l~~~--------~L~~~Gi~----a~~l~~~~~ 145 (449)
T 2j0w_A 79 RYPNVIREEIERLLENITVLAEAAALATSPALTDELV-SHGELMSTLLFVE--------ILRERDVQ----AQWFDVRKV 145 (449)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH-HHHHHHHHHHHHH--------HHHTTSCC----EEECCGGGT
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhccCcCHHHHHHHH-HHHHHHHHHHHHH--------HHHHCCCc----EEEEchHHh
Confidence 0 11245555553 44444 4444554 58999998 889988887
Q ss_pred ceeeeeecccccCccccccceEEEec-----HHHHHHHHcCCcEEEEcC-CccCCCCceeeec---hHHHHHHHHHHcCC
Q 006709 215 NFLAAKRKGVVDGVDYGATGEVKKVD-----VTRMRERLDGGCLVILSN-LGYSSSGEVLNCN---TYEVATACALAIEA 285 (634)
Q Consensus 215 ~~l~ak~~g~~~g~d~g~~G~v~~vd-----~~~I~~LLd~G~IPVv~~-v~~~~~Gei~nid---~D~lAa~LA~aL~A 285 (634)
+++.. +|+. +++...+ .+.++.|++.+ |||+++ .+.+.+|.+.+++ +|.+|+.+|.+|+|
T Consensus 146 -l~t~~--------~~~~-~~~~~~~~~~~~~~~l~~l~~~~-IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~A 214 (449)
T 2j0w_A 146 -MRTND--------RFGR-AEPDIAALAELAALQLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHA 214 (449)
T ss_dssp -CBBCS--------CTTS-CCBCHHHHHHHHHHHTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTC
T ss_pred -eeecC--------CCCC-ccccHhHhHHHHHHHHHHHhcCC-EEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCC
Confidence 55533 2332 2222222 24666777655 999984 6778888888887 99999999999999
Q ss_pred CEEEEeeccccc---C----CCCccccccCHHHHHHHHH
Q 006709 286 DKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 317 (634)
Q Consensus 286 dkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~ 317 (634)
|+|+++|||||+ | +++++|++++.+|+.++..
T Consensus 215 d~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~ 253 (449)
T 2j0w_A 215 SRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMAT 253 (449)
T ss_dssp SEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHH
T ss_pred CEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHh
Confidence 999999999997 3 3689999999999888753
|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=171.34 Aligned_cols=196 Identities=17% Similarity=0.160 Sum_probs=133.4
Q ss_pred cCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCc--------cccc-----------
Q 006709 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHE--------AKYL----------- 157 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~--------~~~~----------- 157 (634)
.++++|.|+||+.+.+.+ ++.+++-|... .+.++|+|+++..-++..|-++... ..+.
T Consensus 25 ~~~~~V~KFGGTSva~~e~i~~va~iI~~~--~~~~~vVVVSA~g~~Td~Ll~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 102 (510)
T 2cdq_A 25 KGITCVMKFGGSSVASAERMKEVADLILTF--PEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHI 102 (510)
T ss_dssp CCCCEEEEECTGGGSSHHHHHHHHHHHHHC--TTCCEEEEECCSTTHHHHHHHHHHHHTTTCTTTGGGCHHHHHHHHHHH
T ss_pred CCCeEEEEECCcccCCHHHHHHHHHHHHhc--cCCCEEEEEcCCCCCchHHHHHHHHHhhccccchhHHHHHHHHHHHHH
Confidence 467899999999999865 66777666432 3568888888754454443221100 0000
Q ss_pred ------------------------CC---ccCCCHHHHHHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEee
Q 006709 158 ------------------------GR---YRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVS 210 (634)
Q Consensus 158 ------------------------~G---~RvT~~~~l~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~ 210 (634)
.+ ..-.++..+|.+.....+++..++.. .|+++|++ ++.++
T Consensus 103 ~i~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~r~~d~l~s~GE~~s~~ll~~--------~L~~~Gi~----A~~l~ 170 (510)
T 2cdq_A 103 RTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAA--------YLNTIGVK----ARQYD 170 (510)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEC
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHhhhhccccCCHHHHHHHHHHHHHHHHHHHHH--------HHHHCCCC----EEEEE
Confidence 00 01113445555443333455555554 48999998 89999
Q ss_pred ccCCceeeeeecccccCccccccceEEEe----cHHHHHH-HHcCCcEEEEcC-CccCC-CCceeeec---hHHHHHHHH
Q 006709 211 VASGNFLAAKRKGVVDGVDYGATGEVKKV----DVTRMRE-RLDGGCLVILSN-LGYSS-SGEVLNCN---TYEVATACA 280 (634)
Q Consensus 211 ~~dg~~l~ak~~g~~~g~d~g~~G~v~~v----d~~~I~~-LLd~G~IPVv~~-v~~~~-~Gei~nid---~D~lAa~LA 280 (634)
+.+.++++... ++. +++..+ ..+.+.. |++.|.|||+++ .+.+. +|.+.+++ +|.+|+.+|
T Consensus 171 ~~~~~l~t~~~--------~~~-~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA 241 (510)
T 2cdq_A 171 AFEIGFITTDD--------FTN-GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIG 241 (510)
T ss_dssp GGGTTCEECSC--------STT-CCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHH
T ss_pred hhHeeEEEecC--------CCc-cchhhHHHHHHHHHHHHHHHhCCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHH
Confidence 99887777543 221 222222 2345554 789999999998 56777 88988877 999999999
Q ss_pred HHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHH
Q 006709 281 LAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLI 316 (634)
Q Consensus 281 ~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li 316 (634)
.+|+||.|+++|||||+ | +++++|++++.+|+.++.
T Consensus 242 ~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela 284 (510)
T 2cdq_A 242 KALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELA 284 (510)
T ss_dssp HHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHH
T ss_pred HHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHH
Confidence 99999999999999997 3 368999999999987775
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.3e-15 Score=141.46 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=97.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCH-------------HHHHhhc----CcEEEEEECCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DSFYVVEREGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~-------------~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~- 510 (634)
..||+++++|++.|.+|........+....+. +.+...+ ..++|++.+|++||++.+.+...
T Consensus 3 ~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~~ 82 (180)
T 1tiq_A 3 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 82 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred eEEEECCHHhHHHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCHHHHHHHHcCCCceEEEEEECCEEEEEEEEEeCCCc
Confidence 36999999999999999765443322111222 2222222 14788899999999999986432
Q ss_pred -----CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HH
Q 006709 511 -----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TR 581 (634)
Q Consensus 511 -----~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~ 581 (634)
...++|..|+|+|+|||||+|++|| +.++++|++.|++.|.|.+ .+
T Consensus 83 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~L~v~~~N~~ 137 (180)
T 1tiq_A 83 SEEMGAESLEIERIYIKNSFQKHGLGKHLL-------------------------NKAIEIALERNKKNIWLGVWEKNEN 137 (180)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHH
T ss_pred ccccCCCcEEEEEEEECHHHhCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEehhcCHH
Confidence 2468999999999999999999999 8999999999999999988 57
Q ss_pred hHHHHHhCCCeecccc
Q 006709 582 TADWFKSRGFRECSIE 597 (634)
Q Consensus 582 a~~~Y~k~GF~~~~~~ 597 (634)
|++||+|+||+.++..
T Consensus 138 A~~fY~k~GF~~~g~~ 153 (180)
T 1tiq_A 138 AIAFYKKMGFVQTGAH 153 (180)
T ss_dssp HHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCEEcCcE
Confidence 9999999999998864
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=142.86 Aligned_cols=124 Identities=19% Similarity=0.245 Sum_probs=103.7
Q ss_pred cccccCccchHHHHHHhHHHHHH-----cccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-----~~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
..||+++++|++.+.+++..... .....+++.+.+...+ ..++|++.+|++||++.+.+......++|..++
T Consensus 25 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~i~~l~ 104 (182)
T 3kkw_A 25 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 104 (182)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhHHHHhhhccccCCCCCHHHHHHHhcCCccEEEEEeCCeEEEEEEEEeecCCceEEEEEEE
Confidence 46999999999999999765422 1223456777777765 368899999999999999877766789999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
|+|+|||||+|++|+ +.+++++++. +++.+.+.+ ..+.+||+++||+.++
T Consensus 105 V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 159 (182)
T 3kkw_A 105 VAPAARGLGVARYLI-------------------------GVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRA 159 (182)
T ss_dssp ECGGGTTSSHHHHHH-------------------------HHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeEec
Confidence 999999999999999 8888999887 888988877 5789999999999987
Q ss_pred cc
Q 006709 596 IE 597 (634)
Q Consensus 596 ~~ 597 (634)
..
T Consensus 160 ~~ 161 (182)
T 3kkw_A 160 IA 161 (182)
T ss_dssp EE
T ss_pred cc
Confidence 64
|
| >4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=141.96 Aligned_cols=123 Identities=22% Similarity=0.293 Sum_probs=94.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeecCC--Ce
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFKE--KC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l---------~~~~V~~~~g~iiG~~~l~~~~~~--~~ 513 (634)
..||+++++|++.|.+|++.....+.. .+.+.++..... ..+++++.+|+|||++.+.+.... ..
T Consensus 9 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~~~~~ 88 (173)
T 4h89_A 9 LQVRDAEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPGPGAH 88 (173)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEEEecCCCCCce
Confidence 479999999999999998876654322 223444433321 135666778999999999875432 22
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-----HHhHHHHHh
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-----TRTADWFKS 588 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-----~~a~~~Y~k 588 (634)
..+..++|+|+|||||||++|+ +.++++|++.|++.+.+.+ ++|++||+|
T Consensus 89 ~~~~~~~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k 143 (173)
T 4h89_A 89 VASASFMVAAAARGRGVGRALC-------------------------QDMIDWAGREGFRAIQFNAVVETNTVAVKLWQS 143 (173)
T ss_dssp EEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHH
T ss_pred EEEEeeEEEEeeccchHHHHHH-------------------------HHHHHHHHHCCCcEEEEeeecccCHHHHHHHHH
Confidence 4445899999999999999999 9999999999999887642 579999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||++++.
T Consensus 144 ~GF~~~G~ 151 (173)
T 4h89_A 144 LGFRVIGT 151 (173)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEE
Confidence 99999875
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-15 Score=137.56 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=94.1
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCc-----cC---CHHHHHhhc----CcEEEEEECCeEEEEEEEeeec--------
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALV-----RR---TDEELLKAL----DSFYVVEREGQIIACAALFPFF-------- 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~-----~~---~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-------- 509 (634)
.||+++++|++.+.+|+.......... .+ ..+.+...+ ..++|++.+|++||++.+....
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 82 (153)
T 2q0y_A 3 ECRPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSHP 82 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCBTTBT
T ss_pred EEEECCHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHHHHhcCCCeeEEEEEeCCeEEEEEEEEeeccCCCCCCC
Confidence 589999999999999987655433210 00 011122222 2578899999999999886431
Q ss_pred -CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHH
Q 006709 510 -KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFK 587 (634)
Q Consensus 510 -~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~ 587 (634)
....++|..|+|+|+|||||+|++|| +++++.+++.|+..+.|.+ ..|..||+
T Consensus 83 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~L~~~~~A~~fY~ 137 (153)
T 2q0y_A 83 LQDKRGYILNLYVDPSHRERGIGQALM-------------------------NRAEAEFAERGIAFAVLHATEMGQPLYA 137 (153)
T ss_dssp TCSEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCCEEECCCTTTHHHHH
T ss_pred CCCCcEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEeCHHHHHHHH
Confidence 12357899999999999999999999 9999999999999999988 56899999
Q ss_pred hCCCeecc
Q 006709 588 SRGFRECS 595 (634)
Q Consensus 588 k~GF~~~~ 595 (634)
++||+..+
T Consensus 138 k~GF~~~~ 145 (153)
T 2q0y_A 138 RMGWSPTT 145 (153)
T ss_dssp HTTCCCCC
T ss_pred HcCCccch
Confidence 99999877
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=5.8e-15 Score=141.75 Aligned_cols=123 Identities=23% Similarity=0.317 Sum_probs=97.1
Q ss_pred ccccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhh----c---------CcEEEEEECCeEEEEEEEeeec----
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKA----L---------DSFYVVEREGQIIACAALFPFF---- 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~----l---------~~~~V~~~~g~iiG~~~l~~~~---- 509 (634)
.||+++++|++.|.+|+....... +....+.+.+... + ..++|++.+|++||++.+.+..
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred ccccCChHHHHHHHHHHHHHHhhhHHHHhccCCHHHHHHHHHHHHhCCCCccccccEEEEEECCeEEEEEEEecCcHHHH
Confidence 489999999999999987765432 1122334333221 1 2489999999999999886432
Q ss_pred --------------------------CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHH
Q 006709 510 --------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563 (634)
Q Consensus 510 --------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i 563 (634)
.....+|..|+|+|+|||||||++|| +++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~ 137 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLL-------------------------DAL 137 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHH-------------------------HTH
T ss_pred HHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHH-------------------------HHH
Confidence 12357899999999999999999999 899
Q ss_pred HHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 564 EKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 564 ~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
++.|++.|++.|.|.+ .+|++||+++||+.++..
T Consensus 138 ~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~~~~ 175 (199)
T 1u6m_A 138 PEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTM 175 (199)
T ss_dssp HHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEccEE
Confidence 9999999999999988 469999999999998764
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-14 Score=131.78 Aligned_cols=121 Identities=22% Similarity=0.274 Sum_probs=92.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcc--cCccC-CHHHHHhhc----CcEEEEEE-CCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG--ALVRR-TDEELLKAL----DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~-~~~~~~~~l----~~~~V~~~-~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
..||+++++| +.+..++....... ..... ........+ ..++|++. +|++||++.+.+. ....++|..++
T Consensus 4 ~~ir~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~i~~~~ 81 (162)
T 3lod_A 4 YTITDIAPTD-AEFIALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVY 81 (162)
T ss_dssp CEEEECCTTS-HHHHHHHHHHHHHTTCC---------GGGTSCGGGEEEEEEECSSCCEEEEEEEEEC-TTSEEEEEEEE
T ss_pred eEEEECCCCC-HHHHHHHHHHHHhccccCChhHhhhhhHHhCCCCCcEEEEEECCCCCEEEEEEEEEc-CCCeEEEEEEE
Confidence 5799999999 77777766433221 11111 111111112 25888998 9999999999864 56789999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+.+||+++||+.++.
T Consensus 82 v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~ 136 (162)
T 3lod_A 82 IDPQHRGQQLGEKLL-------------------------AALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCA 136 (162)
T ss_dssp ECTTSCSSSHHHHHH-------------------------HHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECC
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEccc
Confidence 999999999999999 9999999999999999987 46899999999999876
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=133.53 Aligned_cols=118 Identities=23% Similarity=0.284 Sum_probs=93.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHH----HHhhc----CcEEEEEECCeEEEEEEEeeecC-----CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVEREGQIIACAALFPFFK-----EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~----~~~~l----~~~~V~~~~g~iiG~~~l~~~~~-----~~~~e 515 (634)
..||+++++|++.+.+++..+...... .+.+. +...+ ..++|++.+|++||++.+..... ...++
T Consensus 6 ~~iR~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~ 83 (150)
T 2dxq_A 6 ISLRAAGPGDLPGLLELYQVLNPSDPE--LTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARPYAF 83 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCTTSCC--CCHHHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHHHHCCEEE
T ss_pred eEEEECChhhHHHHHHHHHHhcccccc--ccHHHHHHHHHHHhcCCCceEEEEecCCEEEEEEEEEEecccccCCCceEE
Confidence 469999999999999998765432221 22222 22222 25788889999999999875432 13588
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
|..++|+|+|||||+|++|| ++++++|++.|+..+.+.+ .+|++||+|+||
T Consensus 84 i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF 138 (150)
T 2dxq_A 84 IENVVTLEARRGRGYGRTVV-------------------------RHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGF 138 (150)
T ss_dssp EEEEECCGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTC
T ss_pred EEEEEECHHHhCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCC
Confidence 99999999999999999999 9999999999999999988 469999999999
Q ss_pred ee
Q 006709 592 RE 593 (634)
Q Consensus 592 ~~ 593 (634)
+.
T Consensus 139 ~~ 140 (150)
T 2dxq_A 139 VQ 140 (150)
T ss_dssp EE
T ss_pred cc
Confidence 84
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.59 E-value=5e-15 Score=134.44 Aligned_cols=123 Identities=13% Similarity=0.107 Sum_probs=97.1
Q ss_pred cccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcE-EEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 006709 447 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSF-YVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (634)
Q Consensus 447 ~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~-~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V 521 (634)
+...+|+++++|++++.++......... .++.+...+.. ..+ ++.+.+|++||++.+.+. ....++|..++|
T Consensus 3 M~~~ir~~~~~d~~~i~~l~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~V 79 (147)
T 3efa_A 3 AMKIIFSASPANRAAAYALRQAVFVEER--GISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQ-ADHVMRFGRVCT 79 (147)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHTTTTT--CCCHHHHSCTTCSTTCCEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEE
T ss_pred hhHHhHcCCHhHHHHHHHHHHHHhhhcc--CCCcHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEeC-CCCeEEEEEEEE
Confidence 3457999999999999999765543211 22332222222 245 344489999999999864 557899999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
+|+|||+|+|++|+ +++++.+++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 80 ~p~~rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~~~~~ 131 (147)
T 3efa_A 80 RKAYRGHGWGRQLL-------------------------TAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGP 131 (147)
T ss_dssp CGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEECC
T ss_pred cHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcccCCc
Confidence 99999999999999 9999999999999999988 579999999999998754
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.8e-14 Score=128.30 Aligned_cols=125 Identities=19% Similarity=0.260 Sum_probs=101.8
Q ss_pred ccccCccchHHHHHHhHHHHHHc-------ccC-ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVES-------GAL-VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 519 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~-------~~~-~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l 519 (634)
.||+++++|++.+.+++...... .+. ...+.+.+...+ ..+++++.+|++||++.+.+.......++..+
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (162)
T 2fia_A 2 KIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKRF 81 (162)
T ss_dssp CEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEEE
T ss_pred cchhCCHhhHHHHHHHHHHHHHHHhccCcccCCCCCCCHHHHHHHHHhCcEEEEEECCEEEEEEEEeeCCCCCceEEEEE
Confidence 58999999999999998764331 111 222455665554 47889999999999999987655466789999
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
+|+|+|||+|+|++|+ +.+++.+++.|++.+.+.+ ..+.+||+++||+..+
T Consensus 82 ~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~ 136 (162)
T 2fia_A 82 ATSPNYIAKGYGSLLF-------------------------HELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIH 136 (162)
T ss_dssp EECGGGTTTTHHHHHH-------------------------HHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred EEcccccCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEe
Confidence 9999999999999999 8999999999999999988 4799999999999988
Q ss_pred cccc
Q 006709 596 IEMI 599 (634)
Q Consensus 596 ~~~~ 599 (634)
....
T Consensus 137 ~~~~ 140 (162)
T 2fia_A 137 ESLQ 140 (162)
T ss_dssp EECC
T ss_pred eEee
Confidence 7544
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=131.49 Aligned_cols=116 Identities=19% Similarity=0.302 Sum_probs=92.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccC--CHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR--TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~--~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
..||+++++|++.+.+++... ....++ +.+.+...+ ..++|++.+|++||++.+.. ....++|..++|+
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~--~~~~~~i~~l~V~ 78 (144)
T 2pdo_A 4 MEIRVFRQEDFEEVITLWERC---DLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGY--DGHRGSAYYLGVH 78 (144)
T ss_dssp EEEEECCGGGHHHHHHHHHHT---TCCBTTBCHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEE--CSSCEEEEEEEEC
T ss_pred eEEEECchhhHHHHHHHHhcc---cccCCccchHHHHHHHhhCCCccEEEEEcCCcEEEEEEeec--CCCceEEEEEEEC
Confidence 368999999999999987543 222222 223343333 36889999999999998763 3356889999999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
|+|||||+|++|| +++++.+++.|+..+.+.+ ..+.+||+++||+..
T Consensus 79 p~~rg~GiG~~Ll-------------------------~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~ 129 (144)
T 2pdo_A 79 PEFRGRGIANALL-------------------------NRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHA 129 (144)
T ss_dssp GGGTTSCHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEEC
T ss_pred ccccCCcHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCccc
Confidence 9999999999999 8999999999999999877 578999999999984
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=135.93 Aligned_cols=120 Identities=17% Similarity=0.207 Sum_probs=95.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecC----------CCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----------EKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~----------~~~~ 514 (634)
..||+++++|++.+.++....... .++.+.+...+ ..++|++.++++||++.+.+... ...+
T Consensus 13 ~~iR~~~~~D~~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~ 88 (168)
T 2x7b_A 13 FTLRNARMDDIDQIIKINRLTLPE----NYPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKG 88 (168)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCSC----CCCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHCCC----CccHHHHHHHHhcCCceEEEEEECCeEEEEEEEEEeccccccccccCCCcEE
Confidence 369999999999999986543222 23344443333 35788889999999998875322 1367
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~ 589 (634)
+|..++|+|+|||||+|++|+ +.+++++++. |++.|.+.+ .+|++||+|+
T Consensus 89 ~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~ 143 (168)
T 2x7b_A 89 HVVSIAVLEEYRRKGIATTLL-------------------------EASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKL 143 (168)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHT
T ss_pred EEEEEEECHHHhccCHHHHHH-------------------------HHHHHHHHHhcCeeEEEEEEEeCCHHHHHHHHHC
Confidence 899999999999999999999 9999999988 999999987 4799999999
Q ss_pred CCeecccc
Q 006709 590 GFRECSIE 597 (634)
Q Consensus 590 GF~~~~~~ 597 (634)
||+..+..
T Consensus 144 GF~~~~~~ 151 (168)
T 2x7b_A 144 NFKKVKVL 151 (168)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEe
Confidence 99998753
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=134.97 Aligned_cols=122 Identities=17% Similarity=0.178 Sum_probs=99.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCcc-------------CCHHHHHhhc----Cc----EEEEEECCeEEEEEEEee
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR-------------RTDEELLKAL----DS----FYVVEREGQIIACAALFP 507 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~-------------~~~~~~~~~l----~~----~~V~~~~g~iiG~~~l~~ 507 (634)
..||+++++|++.+.+++.......+... ++.+.+...+ .. ++|++.+|++||++.+.+
T Consensus 27 i~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~ 106 (183)
T 3fix_A 27 IEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIELKI 106 (183)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCHHHHHHHHHHHHTTSSEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEeCCHhhHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHhcChHHHHHHHccccccccceEEEEEeCCEEEEEEEEEe
Confidence 57999999999999999876544422211 2233333333 23 899999999999999986
Q ss_pred ecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhH
Q 006709 508 FFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTA 583 (634)
Q Consensus 508 ~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~ 583 (634)
. ...++|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ .++.
T Consensus 107 ~--~~~~~i~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~n~~a~ 159 (183)
T 3fix_A 107 I--ANKAELLRLYLKPEYTHKKIGKTLL-------------------------LEAEKIMKKKGILECRLYVHRQNSVGF 159 (183)
T ss_dssp E--TTEEEEEEEEECGGGCCHHHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEETTCHHHH
T ss_pred C--CCceEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCceEEEEEecCCHHHH
Confidence 5 5789999999999999999999999 8999999999999999988 5699
Q ss_pred HHHHhCCCeecccc
Q 006709 584 DWFKSRGFRECSIE 597 (634)
Q Consensus 584 ~~Y~k~GF~~~~~~ 597 (634)
+||+++||+..+..
T Consensus 160 ~~y~k~GF~~~~~~ 173 (183)
T 3fix_A 160 SFYYKNGFKVEDTD 173 (183)
T ss_dssp HHHHHTTCEEEEEC
T ss_pred HHHHHcCCEEeccc
Confidence 99999999997753
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=133.87 Aligned_cols=121 Identities=18% Similarity=0.118 Sum_probs=96.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC----cEEEEEECCeEEEEEEEeeecC-------CCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD----SFYVVEREGQIIACAALFPFFK-------EKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~----~~~V~~~~g~iiG~~~l~~~~~-------~~~~ei~ 517 (634)
..||+++.+|++.+.+++...+.. ......+.+...+. .++|++.+|++||++.+.+... ...++|.
T Consensus 22 ~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 99 (166)
T 4evy_A 22 MNIKPASEASLKDWLELRNKLWSD--SEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYVNGTETSPVGFLE 99 (166)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSCC--CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHhcC--CchHHHHHHHHHhcCCCceEEEEEECCeEEEEEEEEeecccccCCCCCCeEEEE
Confidence 469999999999999998764333 11111233444332 5888999999999999854321 4668999
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.++|+|+|||+|+|++|+ +++++++++.|++.+.+.+ ..+.+||+++||+.
T Consensus 100 ~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 154 (166)
T 4evy_A 100 GIYVLPAHRRSGVATMLI-------------------------RQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQE 154 (166)
T ss_dssp EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred EEEEChhhhcCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEe
Confidence 999999999999999999 9999999999999999988 35899999999998
Q ss_pred ccc
Q 006709 594 CSI 596 (634)
Q Consensus 594 ~~~ 596 (634)
.+.
T Consensus 155 ~~~ 157 (166)
T 4evy_A 155 TEK 157 (166)
T ss_dssp EEE
T ss_pred cce
Confidence 663
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-14 Score=128.60 Aligned_cols=143 Identities=17% Similarity=0.272 Sum_probs=107.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCH------HHHHhhc----CcEEEEEECCe-EEEEEEEeeecCCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD------EELLKAL----DSFYVVEREGQ-IIACAALFPFFKEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~------~~~~~~l----~~~~V~~~~g~-iiG~~~l~~~~~~~~~ei~ 517 (634)
..||+++++|++.+.+++.......+...++. +.+...+ ..+++++.+++ +||++.+.+. ....+++.
T Consensus 4 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~i~ 82 (163)
T 3d8p_A 4 INIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRL-DNNMSALK 82 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHTTSCCSCCGGGCGGGGCHHHHTTTTTCEEEEEECTTCCEEEEEEEEEC-STTEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHhhCCCCccccchHHHHHHHHHhcCCceEEEEEeCCCeEEEEEEEEec-CCCEEEEE
Confidence 46899999999999999887665444322222 1333333 35788888888 9999998854 45678899
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.++|+|+|||||+|++|+ +.+++.+++.|++.+.+.+ .++.+||+++||+.
T Consensus 83 ~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~ 137 (163)
T 3d8p_A 83 KMFVDKGYRNLKIGKKLL-------------------------DKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFRE 137 (163)
T ss_dssp EEEECGGGTTTTHHHHHH-------------------------HHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred EEEEChhhccCCHHHHHH-------------------------HHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEE
Confidence 999999999999999999 8999999999999999988 36899999999999
Q ss_pred cccccchhHhhhhccCCCCceEEEeec
Q 006709 594 CSIEMIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
.+....+... .....+..+|-+.|
T Consensus 138 ~~~~~~~~~~---~~~~~~~~~~~~~l 161 (163)
T 3d8p_A 138 IKRGDLPSSF---PKLDVDNRFYYRNL 161 (163)
T ss_dssp ECGGGSCTTS---CCCC--CEEEEEEC
T ss_pred eeeccchhhc---cccccceeeeehhc
Confidence 9876655321 11223455555655
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-14 Score=130.17 Aligned_cols=123 Identities=19% Similarity=0.234 Sum_probs=100.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcc-----cCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG-----ALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~-----~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
..||+++++|++.+.+++....... ...+++.+.+...+ ..+++++.+|++||++.+.+......++|..++
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~~ 82 (160)
T 2i6c_A 3 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 82 (160)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred eEeccCCHHHHHHHHHHHhhHHHHhccCccccCccCHHHHHHHhccCCceEEEEeCCeEEEEEEEEEEcCCCceEEEEEE
Confidence 4689999999999999875432211 12345666666655 256788899999999999977666779999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
|+|+|||+|+|++|+ +.+++.+++ .|++.+.+.+ ..+.+||+++||+..+
T Consensus 83 v~p~~rg~Gig~~l~-------------------------~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 137 (160)
T 2i6c_A 83 VAPAARGLGVARYLI-------------------------GVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRA 137 (160)
T ss_dssp ECGGGTTTTHHHHHH-------------------------HHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred ECHHHcCCCHHHHHH-------------------------HHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEEcc
Confidence 999999999999999 888899988 7999999987 4789999999999987
Q ss_pred c
Q 006709 596 I 596 (634)
Q Consensus 596 ~ 596 (634)
.
T Consensus 138 ~ 138 (160)
T 2i6c_A 138 I 138 (160)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-14 Score=129.28 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=100.5
Q ss_pred ccccCccchHHHHHHhHHHHHHcc----------cCccCCHHHHHhhc----CcEEEEEECC-eEEEEEEEeeecCC---
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESG----------ALVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPFFKE--- 511 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~----------~~~~~~~~~~~~~l----~~~~V~~~~g-~iiG~~~l~~~~~~--- 511 (634)
.||+++++|++.+.+++....... ....++.+.+...+ ..++|++.++ ++||++.+.+....
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~~~~~~~~ 81 (164)
T 4e0a_A 2 IIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPLLP 81 (164)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEEEEECCCS
T ss_pred EEEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEecCCCCCc
Confidence 589999999999999987654321 02334566666655 2578888877 99999999765322
Q ss_pred -----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHh
Q 006709 512 -----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRT 582 (634)
Q Consensus 512 -----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a 582 (634)
..++|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+
T Consensus 82 ~~~~~~~~~i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~a 136 (164)
T 4e0a_A 82 TMQQRKTVYISDLCVDETRRGGGIGRLIF-------------------------EAIISYGKAHQVDAIELDVYDFNDRA 136 (164)
T ss_dssp SBCCEEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHH
T ss_pred cccCCcEEEEEEEEECHHHhcCChHHHHH-------------------------HHHHHHHHHcCCCEEEEEEEcCCHHH
Confidence 348999999999999999999999 9999999999999999987 478
Q ss_pred HHHHHhCCCeecccccc
Q 006709 583 ADWFKSRGFRECSIEMI 599 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~~~~ 599 (634)
.+||+++||+..+....
T Consensus 137 ~~~y~k~GF~~~~~~~~ 153 (164)
T 4e0a_A 137 KAFYHSLGMRCQKQTME 153 (164)
T ss_dssp HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHcCCEEeceecc
Confidence 99999999999876443
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3e-14 Score=133.82 Aligned_cols=122 Identities=25% Similarity=0.324 Sum_probs=94.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcc-c--CccCCHHHHHhh-c-----CcEEEEEE--------CCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG-A--LVRRTDEELLKA-L-----DSFYVVER--------EGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~-~--~~~~~~~~~~~~-l-----~~~~V~~~--------~g~iiG~~~l~~~~~- 510 (634)
..||+++++|++.|.+|+..+.... . ..+++.+.+... + ..++|++. ++++||++.+.+...
T Consensus 4 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ivG~~~~~~~~~~ 83 (170)
T 2bei_A 4 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 83 (170)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHhcCCCCcEEEEEEEeccccCCCCCCcEEEEEEEEeeccc
Confidence 4699999999999999976543211 1 123455555432 1 13477777 799999998764221
Q ss_pred --CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHH
Q 006709 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 --~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~ 584 (634)
...++|..|+|+|+|||||+|++|| +++++++++.|+..+.|.+ .+|.+
T Consensus 84 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~L~v~~~N~~A~~ 138 (170)
T 2bei_A 84 WKGRTIYLEDIYVMPEYRGQGIGSKII-------------------------KKVAEVALDKGCSQFRLAVLDWNQRAMD 138 (170)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHH
T ss_pred cCCCcEEEEEEEEChHhcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEeccCHHHHH
Confidence 2357899999999999999999999 9999999999999999987 47999
Q ss_pred HHHhCCCeecc
Q 006709 585 WFKSRGFRECS 595 (634)
Q Consensus 585 ~Y~k~GF~~~~ 595 (634)
||+++||+..+
T Consensus 139 fY~k~GF~~~~ 149 (170)
T 2bei_A 139 LYKALGAQDLT 149 (170)
T ss_dssp HHHHTTCEEHH
T ss_pred HHHHCCCEecc
Confidence 99999999865
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.3e-14 Score=132.38 Aligned_cols=142 Identities=17% Similarity=0.219 Sum_probs=103.0
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCcc---CCHHHHHhhcC--cEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEECC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVR---RTDEELLKALD--SFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSP 523 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~---~~~~~~~~~l~--~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l~V~p 523 (634)
.||+++++|++.+.++...+.. .+... ...+.+.+.+. .++++. .+|++||++.+.+......++|..++|+|
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~l~V~p 80 (180)
T 1n71_A 2 IISEFDRNNPVLKDQLSDLLRL-TWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVES 80 (180)
T ss_dssp EEEECCTTCHHHHHHHHHHHHH-HCTTTSSSTHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECT
T ss_pred EEEECCccCHHHHHHHHHHHHH-hcccccchhHHHHHHHHhCCCcEEEEEecCCeEEEEEEEeccCCCceEEEEEEEEcc
Confidence 5899999999777666543322 22211 22444555542 344554 57999999999876556789999999999
Q ss_pred CCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH-----------------------
Q 006709 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT----------------------- 580 (634)
Q Consensus 524 ~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~----------------------- 580 (634)
+|||||+|++|+ +++++.+++.|++.+.+.+.
T Consensus 81 ~~rg~GiG~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~~~~~~ 135 (180)
T 1n71_A 81 SRRKNQIGTRLV-------------------------NYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVAS 135 (180)
T ss_dssp TSCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHT
T ss_pred ccccCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEecCCcccccccccccccccchhhhh
Confidence 999999999999 99999999999999999872
Q ss_pred ------HhHHHHHhCCCeecccccchhHhhhhccCCCCceEEE-eecCCCC
Q 006709 581 ------RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLPDT 624 (634)
Q Consensus 581 ------~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~~ 624 (634)
.|.+||+++||+.++..... .......++| |.|.|.+
T Consensus 136 v~n~~~~a~~~y~k~GF~~~~~~~~~-------~~~~~~~~~m~k~l~~~~ 179 (180)
T 1n71_A 136 IQNLREHPYEFYEKLGYKIVGVLPNA-------NGWDKPDIWMAKTIIPRP 179 (180)
T ss_dssp CCBSSCCTHHHHHHTTCEEEEEETTT-------TSTTCCEEEEEEECSCCC
T ss_pred hcccchHHHHHHHHcCcEEEeeeccc-------CCCCCCcEEEEecCCCCC
Confidence 46899999999998764321 1123455666 7776654
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-14 Score=128.06 Aligned_cols=125 Identities=17% Similarity=0.139 Sum_probs=102.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec--------------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-------------- 509 (634)
..||+++++|++.+.+++........ ..+++.+.+.+.+ ..+++++.+|++||++.+.+..
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 85 (166)
T 1cjw_A 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 85 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred eeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEEEECCeEEEEEEeeeeccccccccccccccC
Confidence 46899999999999999865543321 2345666666655 3688999999999999998653
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec-HHhHHHHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT-TRTADWFK 587 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t-~~a~~~Y~ 587 (634)
....++|..++|+|+|||||+|++|+ +.+++.+++. |+..+.+.+ ..+.+||+
T Consensus 86 ~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~~g~~~i~l~~n~~a~~~y~ 140 (166)
T 1cjw_A 86 RGHSAHLHALAVHRSFRQQGKGSVLL-------------------------WRYLHHVGAQPAVRRAVLMCEDALVPFYQ 140 (166)
T ss_dssp TCCEEEEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHTSTTCCEEEEEECGGGHHHHH
T ss_pred CCCceEEEEEEECHhhccCChHHHHH-------------------------HHHHHHHHHhcCcceEEEecCchHHHHHH
Confidence 35678999999999999999999999 9999999984 999998866 57999999
Q ss_pred hCCCeeccccc
Q 006709 588 SRGFRECSIEM 598 (634)
Q Consensus 588 k~GF~~~~~~~ 598 (634)
++||+..+...
T Consensus 141 k~GF~~~~~~~ 151 (166)
T 1cjw_A 141 RFGFHPAGPCA 151 (166)
T ss_dssp TTTEEEEEECS
T ss_pred HcCCeECCccc
Confidence 99999988643
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.6e-15 Score=132.64 Aligned_cols=123 Identities=20% Similarity=0.255 Sum_probs=100.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeec--CCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF--KEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~V~~~~g~iiG~~~l~~~~--~~~~~ei~ 517 (634)
..||+++++|++.+.+++.......+. ..+.+.+.. ..++|++.+|++||++.+.+.. ....++|.
T Consensus 4 ~~ir~~~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~i~ 80 (150)
T 3gy9_A 4 VTIERVNDFDGYNWLPLLAKSSQEGFQ---LVERMLRNRREESFQEDGEAMFVALSTTNQVLACGGYMKQSGQARTGRIR 80 (150)
T ss_dssp CEEEECSCGGGSCCHHHHHHHHHTTCC---HHHHHHHTTTTSCSCSTTCEEEEEECTTCCEEEEEEEEECTTSTTEEEEE
T ss_pred EEEEECcccCHHHHHHHHHHHHHhccc---chHHHHHHHHHhhhcCCCcEEEEEEeCCeEEEEEEEEeccCCCCCeEEEE
Confidence 469999999999999998877666442 112222221 3688999999999999998543 56789999
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeecccc
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 597 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~~ 597 (634)
.++|+|+|||||+|++|+ +.+++.+++ |+..+.+.+..+.+||+++||+.++..
T Consensus 81 ~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~-~~~~i~l~~~~a~~~y~k~GF~~~~~~ 134 (150)
T 3gy9_A 81 HVYVLPEARSHGIGTALL-------------------------EKIMSEAFL-TYDRLVLYSEQADPFYQGLGFQLVSGE 134 (150)
T ss_dssp EEEECGGGTTSSHHHHHH-------------------------HHHHHHHTT-TCSEEEECCSSCHHHHHHTTCEECCCS
T ss_pred EEEECHhhcCCCHHHHHH-------------------------HHHHHHHHh-CCCEEEEechHHHHHHHHCCCEEeeee
Confidence 999999999999999999 999999988 999999998789999999999998765
Q ss_pred cch
Q 006709 598 MIP 600 (634)
Q Consensus 598 ~~~ 600 (634)
.++
T Consensus 135 ~~~ 137 (150)
T 3gy9_A 135 KIT 137 (150)
T ss_dssp SCS
T ss_pred eee
Confidence 444
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=8e-14 Score=128.54 Aligned_cols=144 Identities=15% Similarity=0.138 Sum_probs=106.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCC--CeEEEEEEEECC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKE--KCGEVAAIGVSP 523 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~--~~~ei~~l~V~p 523 (634)
..||+++++|++.+.+++.... ...++.+.+...+ ..+++++.++++||++.+.+.... ..++|..++|+|
T Consensus 7 ~~ir~~~~~D~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~v~p 82 (170)
T 2ob0_A 7 IELGDVTPHNIKQLKRLNQVIF----PVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLA 82 (170)
T ss_dssp EEEEECCTTTHHHHHHHHHHHC----SSCCCHHHHHHHTTSGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEECG
T ss_pred EEEEECCHhhHHHHHHHHHHHc----ccccCHHHHHHHhcCCCcEEEEEECCeEEEEEEEEEEecCCCcEEEEEEEEECH
Confidence 4699999999999999976532 3344555555544 368888999999999998755332 468999999999
Q ss_pred CCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCCCeeccccc
Q 006709 524 ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 524 ~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~GF~~~~~~~ 598 (634)
+|||+|+|++|+ ..+++.+++. |++.+.+.+ ..+.+||+++||+..+...
T Consensus 83 ~~rg~Gig~~ll-------------------------~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~ 137 (170)
T 2ob0_A 83 PYRRLGIGTKML-------------------------NHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKK 137 (170)
T ss_dssp GGTTSSHHHHHH-------------------------HHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEEET
T ss_pred HHcCcCHHHHHH-------------------------HHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEEeEeee
Confidence 999999999999 8899999887 999999988 3689999999999987632
Q ss_pred chhHhhhhccCCCCceEEEeecCCCCCC
Q 006709 599 IPEERRKRINLSRNSKYYMKKLLPDTSG 626 (634)
Q Consensus 599 ~~~~~~~~~~~~~~s~~~~k~l~~~~~~ 626 (634)
-- ..+......++|.+.++..++
T Consensus 138 ~~-----~~~g~~~~~~~m~~~l~~~~~ 160 (170)
T 2ob0_A 138 NY-----YKRIEPADAHVLQKNLKVPSG 160 (170)
T ss_dssp TC-----CSSSSSCCEEEEEEEC-----
T ss_pred cc-----ccCCCCCccEEEEEeccCCcc
Confidence 10 012233456777444444343
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-13 Score=126.33 Aligned_cols=124 Identities=20% Similarity=0.190 Sum_probs=101.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCC---CeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~---~~~ 514 (634)
..||+++++|++.+.+++......... .+.+.+++...+ ..+++++.+|++||++.+.+.... ...
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 83 (174)
T 3dr6_A 4 MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYT 83 (174)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred eEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhcccCceEEEEecCCeEEEEEEEeecCCCCCcceE
Confidence 469999999999999998876554321 234555555443 368899999999999999865432 347
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
++..++|+|+|||+|+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++|
T Consensus 84 ~~~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~G 138 (174)
T 3dr6_A 84 VEHSVYVHPAHQGKGLGRKLL-------------------------SRLIDEARRCGKHVMVAGIESQNAASIRLHHSLG 138 (174)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEEEEECHHHccCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCC
Confidence 888999999999999999999 9999999999999999887 46899999999
Q ss_pred Ceecccc
Q 006709 591 FRECSIE 597 (634)
Q Consensus 591 F~~~~~~ 597 (634)
|+.++..
T Consensus 139 f~~~~~~ 145 (174)
T 3dr6_A 139 FTVTAQM 145 (174)
T ss_dssp CEEEEEE
T ss_pred CEEEEEc
Confidence 9998763
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-14 Score=130.73 Aligned_cols=124 Identities=16% Similarity=0.216 Sum_probs=92.1
Q ss_pred cccccCccchHHHHHHhHHHHHH-c-ccCc-cCCHHHH---Hhhc-----CcEEEEEECCeEEEEEEEeeecC-----CC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-S-GALV-RRTDEEL---LKAL-----DSFYVVEREGQIIACAALFPFFK-----EK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-~-~~~~-~~~~~~~---~~~l-----~~~~V~~~~g~iiG~~~l~~~~~-----~~ 512 (634)
..||+++++|++.+.+++..... . .... ....+.+ ...+ ..++|++.+|++||++.+..... ..
T Consensus 5 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 84 (153)
T 1z4e_A 5 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 84 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHcCCCeeEEEEecCCcEEEEEEEEecCCcccCCcc
Confidence 46899999999999999764110 0 0000 1111111 1111 25788889999999998864321 23
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.++|..++|+|+|||||+|++|| ++++++|++.|+..+.+.+ ..|.+||++
T Consensus 85 ~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k 139 (153)
T 1z4e_A 85 RATIEGVRTHSAARGQGIGSQLV-------------------------CWAIERAKERGCHLIQLTTDKQRPDALRFYEQ 139 (153)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHTTEEEEEEEEETTCTTHHHHHHH
T ss_pred ceEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEccCChHHHHHHHH
Confidence 47899999999999999999999 9999999999999999888 369999999
Q ss_pred CCCeecccc
Q 006709 589 RGFRECSIE 597 (634)
Q Consensus 589 ~GF~~~~~~ 597 (634)
+||+.....
T Consensus 140 ~GF~~~~~~ 148 (153)
T 1z4e_A 140 LGFKASHEG 148 (153)
T ss_dssp HTCEEEEEE
T ss_pred cCCceecee
Confidence 999987643
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=131.62 Aligned_cols=123 Identities=14% Similarity=0.169 Sum_probs=95.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhh-cCcEEEEEECCeEEEEEEEeeec-CCCeEEEEEEEECCCCc
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA-LDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~-l~~~~V~~~~g~iiG~~~l~~~~-~~~~~ei~~l~V~p~~r 526 (634)
..||+++++|++.+.+++................+... -..++|++.+|++||++.+.+.. ....++|..++|+|+||
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~r 81 (157)
T 1mk4_A 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEECCHhHHHHHHHHHHHhccCcchhhHHHHHHHhccCCcEEEEEECCeEEEEEEEecCCCCCCeEEEEEEEECHHHc
Confidence 35899999999999999754332211111111112121 23678888999999999886533 34678999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|++|+ +.+++.+++.|++.+.+.+ ..+.+||+++||+.++.
T Consensus 82 g~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 130 (157)
T 1mk4_A 82 KMQIGKQLY-------------------------DVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKG 130 (157)
T ss_dssp HHHHHHHHH-------------------------HHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCC
T ss_pred CCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcCC
Confidence 999999999 8999999999999999988 36899999999999884
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-14 Score=127.39 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=96.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHH----Hhhc-----CcEEEEEECCeEEEEEEEeeecC----CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL----LKAL-----DSFYVVEREGQIIACAALFPFFK----EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~----~~~l-----~~~~V~~~~g~iiG~~~l~~~~~----~~~~e 515 (634)
..||+++++|++.+.++...........+.+.+.. ...+ ..+++++.+|++||++.+.+... ....+
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 86 (157)
T 3dsb_A 7 IEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGNFLW 86 (157)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCGGGCEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHhCcCcceEEEEEeCCcEEEEEEEEEeccccCCCceEE
Confidence 46999999999999998766543111111222222 2211 36788889999999999975322 23467
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcC-CcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLG-LDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g-~~~l~l~t----~~a~~~Y~k~G 590 (634)
|..++|+|+|||+|+|++|+ +.+++++++.| +..+.+.+ .++.+||+++|
T Consensus 87 i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~G 141 (157)
T 3dsb_A 87 IQSVYVDKEYRRKGIFNYLF-------------------------NYIKNICDKDENIVGMRLYVEKENINAKATYESLN 141 (157)
T ss_dssp EEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTT
T ss_pred EEEEEECHHHhcCCHHHHHH-------------------------HHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCC
Confidence 99999999999999999999 99999999999 98888877 46999999999
Q ss_pred Ceecccccch
Q 006709 591 FRECSIEMIP 600 (634)
Q Consensus 591 F~~~~~~~~~ 600 (634)
|+.++..+..
T Consensus 142 f~~~~~~~~~ 151 (157)
T 3dsb_A 142 MYECDYNMYE 151 (157)
T ss_dssp CEECSEEEEE
T ss_pred CEEecceeee
Confidence 9998765543
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.55 E-value=3e-14 Score=127.93 Aligned_cols=119 Identities=17% Similarity=0.269 Sum_probs=88.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec----CCCeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----KEKCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~----~~~~~ei 516 (634)
..||+++++|++.+.+++... . .+++.+.+.+.+ ..+++++.+|++||++.+.+.. ....++|
T Consensus 9 ~~ir~~~~~D~~~i~~l~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~i 83 (150)
T 3t9y_A 9 RLFNNSDFEKLNQLCKLYDDL---G--YPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYMRI 83 (150)
T ss_dssp EECCGGGGGCHHHHHHHHHHH---T--CCCCHHHHHHHHHHHHTSTTEEEEEEEETTEEEEEEEEEEEECSSSSCEEEEE
T ss_pred HHHHhcCHHHHHHHHHHHHHh---C--CCCCHHHHHHHHHHhhcCCceEEEEEEECCEEEEEEEEEEeccccccCCEEEE
Confidence 579999999999999997553 2 233444444332 2568889999999999998653 3356889
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH------HhHHHHHhCC
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT------RTADWFKSRG 590 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~------~a~~~Y~k~G 590 (634)
..++|+|+|||||+|++|+ +.+++.+++.|++.+.+.+. ++.+||+++|
T Consensus 84 ~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~G 138 (150)
T 3t9y_A 84 LAFVIHSEFRKKGYGKRLL-------------------------ADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNG 138 (150)
T ss_dssp EEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSCEEECCCCCC------------C
T ss_pred EEEEECHHHhccCHHHHHH-------------------------HHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcC
Confidence 9999999999999999999 89999999999999999874 4889999999
Q ss_pred Ceecccc
Q 006709 591 FRECSIE 597 (634)
Q Consensus 591 F~~~~~~ 597 (634)
|+.++..
T Consensus 139 F~~~~~~ 145 (150)
T 3t9y_A 139 YVSNTSG 145 (150)
T ss_dssp CCCCCCC
T ss_pred CEEecce
Confidence 9998754
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.3e-14 Score=131.81 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=91.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHH---HHHhh-----cCcEEEEEECCeEEEEEEEeeec-----CCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDE---ELLKA-----LDSFYVVEREGQIIACAALFPFF-----KEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~---~~~~~-----l~~~~V~~~~g~iiG~~~l~~~~-----~~~~~ 514 (634)
..||+++++|++.|.+++......... ...+.+ .+.+. -..++|++.+|++||++.+.+.. ....+
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 86 (159)
T 1wwz_A 7 EKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVG 86 (159)
T ss_dssp EECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEE
T ss_pred hhhhhCCHhHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHhCCCCcEEEEEECCEEEEEEEEeccccccccCCceE
Confidence 469999999999999997543211100 001111 11111 13588999999999999886421 12347
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+|+|||||+|++|| +++++.+++.| ..+.+.+ .+|.+||+|+|
T Consensus 87 ~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~G 140 (159)
T 1wwz_A 87 AIHEFVVDKKFQGKGIGRKLL-------------------------ITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFG 140 (159)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCC
Confidence 899999999999999999999 89999999999 9998877 57999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 141 F~~~~~ 146 (159)
T 1wwz_A 141 FKKVGK 146 (159)
T ss_dssp CEEEEE
T ss_pred CEEccc
Confidence 999775
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.1e-14 Score=128.00 Aligned_cols=127 Identities=21% Similarity=0.264 Sum_probs=98.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccC-C-HHH----HHhhc----CcEEEEEECCeEEEEEEEeeec--------C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-T-DEE----LLKAL----DSFYVVEREGQIIACAALFPFF--------K 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-~-~~~----~~~~l----~~~~V~~~~g~iiG~~~l~~~~--------~ 510 (634)
..||+++++|++.+.+++...........+ . .+. +...+ ..+++++.+|++||++.+.+.. .
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 81 (157)
T 3mgd_A 2 MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKT 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEECCCBTTBTT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHHHHHHHhcCCceEEEEEEECCEEEEEEEEEeecCCCCccCcC
Confidence 468999999999999998776544322111 1 222 22222 2568899999999999887531 1
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhC
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSR 589 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~ 589 (634)
...++|..++|+|+|||+|+|++|+ +++++++++.|+..+.+.+ ..+.+||+++
T Consensus 82 ~~~~~i~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~ 136 (157)
T 3mgd_A 82 GRKGYITNMYTEPTSRGNGIATGML-------------------------DRLVNEAKERNIHKICLVASKLGRPVYKKY 136 (157)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCCEEECCCTTHHHHHHHH
T ss_pred CcEEEEEEEEEcHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEeCcccHHHHHHc
Confidence 3568899999999999999999999 9999999999999999988 5789999999
Q ss_pred CCeecccccch
Q 006709 590 GFRECSIEMIP 600 (634)
Q Consensus 590 GF~~~~~~~~~ 600 (634)
||+.++....+
T Consensus 137 GF~~~~~~~~~ 147 (157)
T 3mgd_A 137 GFQDTDEWLEL 147 (157)
T ss_dssp TCCCCTTCCCC
T ss_pred CCeecceEEEE
Confidence 99998765443
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.7e-14 Score=127.07 Aligned_cols=123 Identities=23% Similarity=0.239 Sum_probs=98.2
Q ss_pred cccccCccchHHHHHHhHHHHHHccc---CccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeec----CCCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~---~~~~~~~~~~~~l------~~~~V~~~~g~iiG~~~l~~~~----~~~~~e 515 (634)
..||+++++|++.+.+++........ ..+++.+.+.+.+ ..+++++.+|++||++.+.+.. ....++
T Consensus 11 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 90 (166)
T 2fe7_A 11 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 90 (166)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEeCCeEEEEEEEEeccCCcccCCcEE
Confidence 57999999999999999876433221 1345667776665 2578889999999999997642 223478
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
|..++|+|+|||+|+|++|+ +.+++.+++.|++.+.+.+ ..+.+||+++||
T Consensus 91 i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf 145 (166)
T 2fe7_A 91 LEDLYVTPEYRGVGAGRRLL-------------------------RELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGA 145 (166)
T ss_dssp EEEEEECGGGCC--HHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEEEECccccCccHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCC
Confidence 99999999999999999999 8999999999999999888 479999999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+..+.
T Consensus 146 ~~~~~ 150 (166)
T 2fe7_A 146 LPQDE 150 (166)
T ss_dssp EECTT
T ss_pred eEccc
Confidence 98764
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=8.3e-14 Score=127.91 Aligned_cols=123 Identities=21% Similarity=0.289 Sum_probs=98.6
Q ss_pred cccccCccch----HHHHHHhHHHHHHcc----cCccCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeec
Q 006709 449 EGTRTAKVTD----LSGIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 509 (634)
Q Consensus 449 e~iR~a~~~D----~~~i~~l~~~~~~~~----~~~~~~~~~~~~~l-----------~~~~V~~~~g~iiG~~~l~~~~ 509 (634)
..||+++++| ++.+.+++....... +..+.+.+++...+ ..+++++.+|++||++.+.+..
T Consensus 4 ~~ir~~~~~D~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~ 83 (177)
T 1ghe_A 4 AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQ 83 (177)
T ss_dssp CEEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEeCChHHhHhHHHHHHHHHHHHhhccCcccccCCCCHHHHHHHHHHHHHhhcCCceEEEEEecCCEEEEEEEEEecc
Confidence 3689999999 999999987765543 22334444433222 2478889999999999998653
Q ss_pred C---CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec---HHhH
Q 006709 510 K---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---TRTA 583 (634)
Q Consensus 510 ~---~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~ 583 (634)
. ...++|..++|+|+|||||+|++|+ +.+++.+++.|++.+.+.+ ..+.
T Consensus 84 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~a~ 138 (177)
T 1ghe_A 84 KPNGLNRAEVQKLMVLPSARGRGLGRQLM-------------------------DEVEQVAVKHKRGLLHLDTEAGSVAE 138 (177)
T ss_dssp STTCTTEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTSHHH
T ss_pred CCCCcceEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEeccCCHHH
Confidence 2 3479998999999999999999999 9999999999999999988 2599
Q ss_pred HHHHhCCCeeccc
Q 006709 584 DWFKSRGFRECSI 596 (634)
Q Consensus 584 ~~Y~k~GF~~~~~ 596 (634)
+||+++||+..+.
T Consensus 139 ~~y~k~Gf~~~~~ 151 (177)
T 1ghe_A 139 AFYSALAYTRVGE 151 (177)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCEEccc
Confidence 9999999999775
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-13 Score=129.49 Aligned_cols=129 Identities=15% Similarity=0.192 Sum_probs=102.5
Q ss_pred ccccccccCc--cchHHHHHHhHHHHHHcccCccCC------HHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCe
Q 006709 446 DLYEGTRTAK--VTDLSGIKQIIQPLVESGALVRRT------DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKC 513 (634)
Q Consensus 446 D~Ye~iR~a~--~~D~~~i~~l~~~~~~~~~~~~~~------~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~ 513 (634)
..-..||+++ ++|++.+.+++.......+..++. .+.+...+ ..++|++.+|++||++.+.+. ....
T Consensus 17 ~~~~~iR~~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~-~~~~ 95 (181)
T 2q7b_A 17 FQGMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI-DDKT 95 (181)
T ss_dssp CTTEEEEECCCCHHHHHHHHHHHHHHHHTTSCCCCCGGGGGGGGCHHHHTGGGTCEEEEEEETTEEEEEEEEEEC-SSSE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCccccchHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc-CCCE
Confidence 3446799999 999999999987665443332211 12233333 368888999999999999864 4567
Q ss_pred EEEEEEEECCCCcC--CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHH
Q 006709 514 GEVAAIGVSPECRG--QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFK 587 (634)
Q Consensus 514 ~ei~~l~V~p~~rg--qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~ 587 (634)
++|..++|+|+||| ||+|++|+ +.+++++++.|++.+.+.+ .++.+||+
T Consensus 96 ~~i~~~~V~p~~rg~~~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~ 150 (181)
T 2q7b_A 96 AVLKKFFTYPKYRGNPVRLGRKLF-------------------------ERFMLFARASKFTRIVLDTPEKEKRSHFFYE 150 (181)
T ss_dssp EEEEEEEECGGGSSTTTCHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHH
T ss_pred EEEEEEEEChhhcCccccHHHHHH-------------------------HHHHHHHHHCCCcEEEEEecCCCHHHHHHHH
Confidence 89999999999999 99999999 8999999999999999988 36899999
Q ss_pred hCCCeecccccch
Q 006709 588 SRGFRECSIEMIP 600 (634)
Q Consensus 588 k~GF~~~~~~~~~ 600 (634)
++||+..+...++
T Consensus 151 k~GF~~~~~~~~~ 163 (181)
T 2q7b_A 151 NQGFKQITRDELD 163 (181)
T ss_dssp TTTCEEECTTTCC
T ss_pred HCCCEEeeeeecc
Confidence 9999998876544
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-14 Score=132.37 Aligned_cols=122 Identities=21% Similarity=0.268 Sum_probs=90.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCc----cCCHHHHHhhc-CcEEEEE-ECCeEEEEEEEeeecC----CCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL-DSFYVVE-REGQIIACAALFPFFK----EKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~----~~~~~~~~~~l-~~~~V~~-~~g~iiG~~~l~~~~~----~~~~ei~~ 518 (634)
..||+++++|++.+.+++.......... ..+.+.+...+ ...+++. .+|++||++.+.+... ...+++ .
T Consensus 8 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~ 86 (166)
T 2ae6_A 8 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL-S 86 (166)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE-E
T ss_pred eEEEEcCHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHhccCeEEEEeeCCEEEEEEEEEeccccCCCceEEEE-E
Confidence 4699999999999999975433221111 11222333333 4555555 8999999999986411 234666 8
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
++|+|+|||||+|++|| +.+++.+++.|++.|.+.+ .+|++||+|+||+..
T Consensus 87 l~V~p~~rg~GiG~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~ 141 (166)
T 2ae6_A 87 IGVSPDFQDQGIGGSLL-------------------------SYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQE 141 (166)
T ss_dssp EEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred EEECHHHhCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEe
Confidence 99999999999999999 8999999999999999988 479999999999997
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
+.
T Consensus 142 ~~ 143 (166)
T 2ae6_A 142 AH 143 (166)
T ss_dssp EE
T ss_pred eE
Confidence 75
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.5e-14 Score=132.19 Aligned_cols=121 Identities=21% Similarity=0.318 Sum_probs=97.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeec-----CCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~V~~~~g~iiG~~~l~~~~-----~~~~~ 514 (634)
..||+++++|++.+.+++...... .+++.+.+.+.+ ..+++++.+|++||++.+.+.. ....+
T Consensus 21 ~~ir~~~~~D~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 97 (161)
T 3i3g_A 21 LELRVLEESDLSSHLELLGHLTEA---PPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVG 97 (161)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSCC---CCCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGCCEE
T ss_pred EEEEECcHhhHHHHHHHHHHhccC---CCCCHHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCccEE
Confidence 469999999999999996543222 234555555433 2466777899999999998642 25678
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCee
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 593 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~ 593 (634)
+|..++|+|+|||+|+|++|+ +.+++++++.|+..+.+.+ ..+.+||+++||+.
T Consensus 98 ~i~~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~ 152 (161)
T 3i3g_A 98 HIEDVVVDPSYRGAGLGKALI-------------------------MDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRA 152 (161)
T ss_dssp EEEEEEECGGGTTTTHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEE
T ss_pred EEEEEEEcHHHcccCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEecccchhHHHhcCCee
Confidence 999999999999999999999 8999999999999999988 45689999999999
Q ss_pred cccc
Q 006709 594 CSIE 597 (634)
Q Consensus 594 ~~~~ 597 (634)
++..
T Consensus 153 ~~~~ 156 (161)
T 3i3g_A 153 HERQ 156 (161)
T ss_dssp EEEE
T ss_pred cCce
Confidence 8764
|
| >4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-13 Score=131.26 Aligned_cols=127 Identities=18% Similarity=0.219 Sum_probs=96.8
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-------CccCCHHH----HHhhc--CcEEEEEE--CCeEEEEEEEeeec----
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-------LVRRTDEE----LLKAL--DSFYVVER--EGQIIACAALFPFF---- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~----~~~~l--~~~~V~~~--~g~iiG~~~l~~~~---- 509 (634)
..||+++++|++.+.+++........ ......++ +...+ ..++|+.+ +|+|||++.+.+..
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~~~~~~ 86 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPIQPGDP 86 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEECTTHH
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeeccCccch
Confidence 47999999999999999866421111 01111122 22223 36788888 89999999886542
Q ss_pred ------------------------------------CCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccccc
Q 006709 510 ------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIST 553 (634)
Q Consensus 510 ------------------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~ 553 (634)
.....+|..++|+|+|||||+|++|+
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll------------------ 148 (217)
T 4fd4_A 87 DAMVEEAATTETKKWGDILKLLALLERTADVCGRYGLEKAYHVHILAVDPTYRGHSLGQRLL------------------ 148 (217)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHCHHHHHTCSCEEEEEEEEECTTSCSSCHHHHHH------------------
T ss_pred HHHHHhhhhhcChhHHHHHHHHHHHHhcccHHHHcCCCceEEEEEEEECHHHccCCHHHHHH------------------
Confidence 23557888999999999999999999
Q ss_pred CCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccccch
Q 006709 554 NGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 554 ~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~~~ 600 (634)
+.+++.+++.|+..+.+.+ ..+.+||+|+||+..+.....
T Consensus 149 -------~~~~~~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 149 -------QFQMDLSKKLGFKAISGDFTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp -------HHHHHHHHHHTCSEEEEEECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred -------HHHHHHHHHcCCCEEEEEeCCHHHHHHHHHCCCeEEEeEeHH
Confidence 8999999999999999866 579999999999998865443
|
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.5e-14 Score=132.34 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=100.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc----------CcEEEEEECCeEEEEEEEeeecC----CCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------DSFYVVEREGQIIACAALFPFFK----EKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l----------~~~~V~~~~g~iiG~~~l~~~~~----~~~ 513 (634)
..||+++++|++.+.+++.......+. ...+.+++.+.+ ..+++++.+|++||++.+.+... ...
T Consensus 24 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~~~ 103 (183)
T 3i9s_A 24 VEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPKLSGQ 103 (183)
T ss_dssp CEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEEEEESCCGGGCEE
T ss_pred eEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEEECCEEEEEEEEEEecCCCCCCCe
Confidence 579999999999999998765543332 234555554433 13888899999999999986533 256
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++|..++|+|+|||+|+|++|+ +.+++++++.|+..+.+.+ ..+.+||+++
T Consensus 104 ~~i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~ 158 (183)
T 3i9s_A 104 MYMKDLFVSSSARGKGIGLQLM-------------------------KHLATIAITHNCQRLDWTAESTNPTAGKFYKSI 158 (183)
T ss_dssp EEEEEEEECGGGTTSCHHHHHH-------------------------HHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHT
T ss_pred EEEEeEEECHhhcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEecCChHHHHHHHHc
Confidence 8999999999999999999999 9999999999999999888 4689999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 159 GF~~~~~ 165 (183)
T 3i9s_A 159 GASLIRE 165 (183)
T ss_dssp TCEECTT
T ss_pred CCceecc
Confidence 9999774
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=5.5e-14 Score=132.39 Aligned_cols=122 Identities=28% Similarity=0.441 Sum_probs=95.7
Q ss_pred cccccCccchHHHHHHhHHHHHHccc----CccCCHHHHHhhc------CcEEEEEEC-CeEEEEEEEeeecC----CCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK----EKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~----~~~~~~~~~~~~l------~~~~V~~~~-g~iiG~~~l~~~~~----~~~ 513 (634)
..||+++++|++.|.+++........ ..+.+.+++...+ ..++|++.+ |++||++.+.+... ...
T Consensus 3 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 82 (175)
T 1vhs_A 3 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 82 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHHhcCCCceEEEEEcCCCcEEEEEEEeccCCCCccCCE
Confidence 36999999999999999876543321 1223333333322 257888887 99999999986542 234
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
+++ .++|+|+|||||+|++|+ +.++++|++.|+..|.+.+ .+|++||+|+
T Consensus 83 ~e~-~l~V~p~~rg~GiG~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~ 136 (175)
T 1vhs_A 83 AEV-SIYIDEACRGKGVGSYLL-------------------------QEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKH 136 (175)
T ss_dssp EEE-EEEECGGGCSSSHHHHHH-------------------------HHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHT
T ss_pred EEE-EEEEChhhcCCCHHHHHH-------------------------HHHHHHHHhCCceEEEEEEecCCHHHHHHHHHC
Confidence 677 899999999999999999 8999999999999999987 5799999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 137 GF~~~g~ 143 (175)
T 1vhs_A 137 GFAEWGL 143 (175)
T ss_dssp TCEEEEE
T ss_pred CCEEEeE
Confidence 9999875
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=9.6e-14 Score=126.04 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=96.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCcc-------------CCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR-------------RTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~-------------~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~ 513 (634)
..||+++++|++.+.++....+...+... ++.+.+.+.+ ..++|++.+|++||++.+.+.. ...
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~~~ 84 (163)
T 3fnc_A 6 FHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQADKVIGFANFIELE-KGK 84 (163)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHHHHHHSCEEEEEETTEEEEEEEEEEEE-TTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHhcCCHHHHHHhccCCEEEEEEECCEEEEEEEEEeCC-CCc
Confidence 47999999999999999766544332211 1233333333 3689999999999999998754 678
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++|..++|+|+|||||+|++|+ +.+++.++ |+..+.+.+ ..+.+||+++
T Consensus 85 ~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~ 137 (163)
T 3fnc_A 85 SELAAFYLLPEVTQRGLGTELL-------------------------EVGMTLFH--VPLPMFVNVEKGNETAIHFYKAK 137 (163)
T ss_dssp EEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHTT--CCSSEEEEEETTCHHHHHHHHHT
T ss_pred EEEEEEEECHHHhCCCHHHHHH-------------------------HHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHc
Confidence 9999999999999999999999 88888886 888888887 4689999999
Q ss_pred CCeecccc
Q 006709 590 GFRECSIE 597 (634)
Q Consensus 590 GF~~~~~~ 597 (634)
||+..+..
T Consensus 138 Gf~~~~~~ 145 (163)
T 3fnc_A 138 GFVQVEEF 145 (163)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 99998764
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.2e-14 Score=126.44 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=99.1
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCC
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~ 525 (634)
+.-.|+++++|++.+.+++.. ...+..+.+.+.+.+.+ ..+++++.++++||++.+.+ .....++|..++|+|+|
T Consensus 5 ~~i~~~~~~~D~~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 81 (142)
T 2ozh_A 5 VHVSTDNSLLDIGLIHRTLSQ--DTDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVIS-DYATFAYLGDVFVLPEH 81 (142)
T ss_dssp CEEECCGGGCCHHHHHHHHHH--HCSTTTTCCHHHHHHHHHTSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGG
T ss_pred EEecCCCchhhHHHHHHHHhh--ccccCCCCCHHHHHHHhccCcEEEEEECCEEEEEEEEEe-cCCCcEEEEEEEECHHH
Confidence 333457899999999999764 12333344666666655 36788889999999999985 34566899999999999
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
||||+|++|+ +.+++.+++.|++.+.+.+..+.+||+++||+.++.
T Consensus 82 rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~a~~~y~k~GF~~~~~ 127 (142)
T 2ozh_A 82 RGRGYSKALM-------------------------DAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPPLF 127 (142)
T ss_dssp TTSSHHHHHH-------------------------HHHHHCGGGSSCSEEECCCSSCHHHHHTTTCCSCSS
T ss_pred cCCCHHHHHH-------------------------HHHHHHHHhCCCCEEEEecchHHHHHHHCCCEEcCC
Confidence 9999999999 889999999999999998888899999999998764
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-13 Score=125.80 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=95.4
Q ss_pred cccccCccchHHHHHHhHHHHHHc---ccCccC-------CHHHHHhhc--CcEEEEE-ECCeEEEEEEEeeec------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRR-------TDEELLKAL--DSFYVVE-REGQIIACAALFPFF------ 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~---~~~~~~-------~~~~~~~~l--~~~~V~~-~~g~iiG~~~l~~~~------ 509 (634)
..||+++++|++.+.+++...... .....+ +.+.+...+ ..++|++ .+|++||++.+.+..
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~ 93 (179)
T 2oh1_A 14 FLVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTD 93 (179)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHCCCCTTHHHHHHTTCEEEEECTTCCEEEEEEEESSCCHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHhcCCcchhhccccchHHHHHHhhccCcEEEEEecCCeEEEEEEEecCCCcchhc
Confidence 469999999999999997654321 001111 112222222 3678888 899999999987532
Q ss_pred ------CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----
Q 006709 510 ------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---- 579 (634)
Q Consensus 510 ------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---- 579 (634)
....++|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+
T Consensus 94 ~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N 148 (179)
T 2oh1_A 94 LWEDLAIDKAYYLHRIMVSRAFSGISLSKQMI-------------------------YFAEKLGIEMSVPFIRLDCIESN 148 (179)
T ss_dssp HHGGGTTSCEEEEEEEEECGGGTTSCHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTC
T ss_pred ccccCCCCceEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEecCCc
Confidence 13678999999999999999999999 8999999999999999888
Q ss_pred HHhHHHHHhCCCeecccc
Q 006709 580 TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 580 ~~a~~~Y~k~GF~~~~~~ 597 (634)
.++.+||+++||+..+..
T Consensus 149 ~~a~~~y~k~GF~~~~~~ 166 (179)
T 2oh1_A 149 ETLNQMYVRYGFQFSGKK 166 (179)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEeccc
Confidence 468999999999998764
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=127.49 Aligned_cols=119 Identities=19% Similarity=0.239 Sum_probs=94.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCH-------------HHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~-------------~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~ 513 (634)
..||+++++|++.+.+++............+. +.+...+ ..++|++.+|++||++.+. ..
T Consensus 8 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~-----~~ 82 (172)
T 2fiw_A 8 PALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLK-----GP 82 (172)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEE-----TT
T ss_pred cEEEECchhhHHHHHHHHHHHHHHhccccCCHHHHHHHHhhccCHHHHHHHhcCCeEEEEEECCEEEEEEEEe-----cC
Confidence 46999999999999999876544322212222 2222222 3688889999999999988 34
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCe
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 592 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~ 592 (634)
+++..++|+|+|||||+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+
T Consensus 83 ~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~GF~ 137 (172)
T 2fiw_A 83 DHIDMLYVHPDYVGRDVGTTLI-------------------------DALEKLAGARGALILTVDASDNAAEFFAKRGYV 137 (172)
T ss_dssp TEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCE
T ss_pred cEEEEEEECccccCcCHHHHHH-------------------------HHHHHHHHhcCCcEEEEEeCHHHHHHHHHcCCE
Confidence 5788999999999999999999 8999999999999999987 5789999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
..+..
T Consensus 138 ~~~~~ 142 (172)
T 2fiw_A 138 AKQRN 142 (172)
T ss_dssp EEEEE
T ss_pred Eecce
Confidence 97754
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-13 Score=127.21 Aligned_cols=122 Identities=18% Similarity=0.178 Sum_probs=95.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-------ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecC---
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK--- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-------~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~~--- 510 (634)
..||+++++|++.+.+++......... .+++.+++...+ ..++|++.+|++||++.+.+...
T Consensus 5 l~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 84 (172)
T 2i79_A 5 LLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRV 84 (172)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTCSSSSCCTTCCCCCHHHHHHHHHHHHHCSSCEEEEEEETTEEEEEEEEECCCSTTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhcCcccccCCccccCCHHHHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEEecCCCcc
Confidence 369999999999999998765433211 123444433322 25678889999999999885432
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcC-CcEEEEec----HHhHHH
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLG-LDMLFLLT----TRTADW 585 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g-~~~l~l~t----~~a~~~ 585 (634)
...+++ .++|+|+|||||+|++|+ +.++++|++.+ ++.|.+.+ .+|++|
T Consensus 85 ~~~~~~-~~~v~~~~~g~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~ 138 (172)
T 2i79_A 85 RHIGDL-FIVIGKRYWNNGLGSLLL-------------------------EEAIEWAQASGILRRLQLTVQTRNQAAVHL 138 (172)
T ss_dssp TTEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSSCCEEEEEEETTCHHHHHH
T ss_pred ceEEEE-EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCeEEEEEEEECCCHHHHHH
Confidence 234677 799999999999999999 89999999888 99999988 479999
Q ss_pred HHhCCCeeccc
Q 006709 586 FKSRGFRECSI 596 (634)
Q Consensus 586 Y~k~GF~~~~~ 596 (634)
|+|+||+..+.
T Consensus 139 yek~GF~~~g~ 149 (172)
T 2i79_A 139 YQKHGFVIEGS 149 (172)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCEEEeE
Confidence 99999999875
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=2e-13 Score=126.65 Aligned_cols=122 Identities=16% Similarity=0.303 Sum_probs=96.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC---CCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~---~~~~ 514 (634)
..||+++++|++.+.+++......... ...+.+.+...+ ..+++++.+|++||++.+.+... ...+
T Consensus 8 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 87 (170)
T 2ge3_A 8 VTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCG 87 (170)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTEE
T ss_pred EEEeeCCHHHHHHHHHHHHhhhhcccccccCCCCCHHHHHHHHHhhccCCceEEEEEECCEEEEEEEEecccccCCCceE
Confidence 469999999999999998765543321 223443333222 35788889999999999986532 2456
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
++ .++|+|+|||||+|++|+ +.+++++++.|++.|.+.+ .+|.+||+|+|
T Consensus 88 ~~-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~G 141 (170)
T 2ge3_A 88 TL-GMGILPAYRNKGLGARLM-------------------------RRTLDAAHEFGLHRIELSVHADNARAIALYEKIG 141 (170)
T ss_dssp EE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHT
T ss_pred EE-EEEECHHHhCCCHHHHHH-------------------------HHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCC
Confidence 77 899999999999999999 8888999889999999988 47999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 142 F~~~~~ 147 (170)
T 2ge3_A 142 FAHEGR 147 (170)
T ss_dssp CEEEEE
T ss_pred CEEEeE
Confidence 998775
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=128.14 Aligned_cols=122 Identities=22% Similarity=0.357 Sum_probs=96.8
Q ss_pred cccccCccchHH-HHHHhHHHHHHcccCccCCHHHHHhhc---------CcEEEEEE--CCeEEEEEEEeeec-----CC
Q 006709 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (634)
Q Consensus 449 e~iR~a~~~D~~-~i~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~V~~~--~g~iiG~~~l~~~~-----~~ 511 (634)
..||+++++|++ .+.+++..+. ...+++.+++...+ ..+++++. +|++||++.+.+.. ..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 81 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLT---VTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCG 81 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTS---CCCCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEEecCchhhHHHHHHHHHHHh---cCCCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEeccccCCCCC
Confidence 368999999999 9999865422 22245666665532 14566777 79999999998632 24
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
..++|..++|+|+|||||+|++|+ +.+++.+++.|+..+.+.+ ....+||+++|
T Consensus 82 ~~~~i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~G 136 (149)
T 3t90_A 82 KAGHIEDVVVDSRFRGKQLGKKVV-------------------------EFLMDHCKSMGCYKVILDCSVENKVFYEKCG 136 (149)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEECCCCGGGHHHHHTTT
T ss_pred CceEEEEEEECHHHhCCcHHHHHH-------------------------HHHHHHHHHCCCeEEEEeccccHHHHHHHCC
Confidence 568999999999999999999999 8999999999999999987 45669999999
Q ss_pred Ceeccccc
Q 006709 591 FRECSIEM 598 (634)
Q Consensus 591 F~~~~~~~ 598 (634)
|+..+..+
T Consensus 137 F~~~~~~~ 144 (149)
T 3t90_A 137 MSNKSIQM 144 (149)
T ss_dssp CCCCCCCC
T ss_pred Ceecccee
Confidence 99987653
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.3e-13 Score=126.14 Aligned_cols=122 Identities=24% Similarity=0.248 Sum_probs=94.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCC----Ce
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE----KC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~----~~ 513 (634)
..||+++++|++.+.+++......... .+.+.+++...+ ..++|++.+|++||++.+.+.... ..
T Consensus 5 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (175)
T 1yr0_A 5 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 84 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEecCCHhHHHHHHHHHHHHHhcCcccccccCCCHHHHHHHHHhhcccCceEEEEEeCCcEEEEEEEecccCccccCce
Confidence 358999999999999998765443221 223444432222 257788889999999998864321 23
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
.++ .++|+|+|||||+|++|+ +.+++.+++.|+..+.+.+ .+|.+||+|+
T Consensus 85 ~~~-~~~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~ 138 (175)
T 1yr0_A 85 REH-SVYVHKDARGHGIGKRLM-------------------------QALIDHAGGNDVHVLIAAIEAENTASIRLHESL 138 (175)
T ss_dssp EEE-EEEECTTSTTSSHHHHHH-------------------------HHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHT
T ss_pred EEE-EEEECccccCCCHHHHHH-------------------------HHHHHHHHhCCccEEEEEecCCCHHHHHHHHHC
Confidence 444 799999999999999999 8999999999999999877 4799999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 139 GF~~~g~ 145 (175)
T 1yr0_A 139 GFRVVGR 145 (175)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 9999775
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=8.9e-14 Score=124.34 Aligned_cols=121 Identities=22% Similarity=0.216 Sum_probs=94.5
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHH----HHhhc----CcEEEEEE--CCeEEEEEEEeeecC----CCeEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVER--EGQIIACAALFPFFK----EKCGE 515 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~----~~~~l----~~~~V~~~--~g~iiG~~~l~~~~~----~~~~e 515 (634)
.||+++++|++.+.+++..+... +..+.+.+. +...+ ..+++++. +|++||++.+.+... ...++
T Consensus 2 ~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~~ 80 (153)
T 2eui_A 2 RIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVWI 80 (153)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEEE
T ss_pred eeEeCCHhhHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCCCeEEEEEecCCCcEEEEEEEEecCCCCccCceEE
Confidence 58999999999999998754322 111222222 22222 25788888 999999999975432 35689
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
|..++|+|+|||+|+|++|+ +.+++.+++.|++.+.+.+ ..+.+||+++||
T Consensus 81 i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf 135 (153)
T 2eui_A 81 LNDIYVAEEARRQLVADHLL-------------------------QHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGF 135 (153)
T ss_dssp EEEEEECTTSCHHHHHHHHH-------------------------HHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTC
T ss_pred EEEEEEcHHHhcCChHHHHH-------------------------HHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCC
Confidence 99999999999999999999 8999999999999999888 469999999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+..+.
T Consensus 136 ~~~~~ 140 (153)
T 2eui_A 136 REDQE 140 (153)
T ss_dssp BCCCS
T ss_pred EEecc
Confidence 98653
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=127.13 Aligned_cols=124 Identities=21% Similarity=0.258 Sum_probs=97.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCC--------HHHHHhhc----CcEEEEEEC-CeEEEEEEEeeec----CC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT--------DEELLKAL----DSFYVVERE-GQIIACAALFPFF----KE 511 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~--------~~~~~~~l----~~~~V~~~~-g~iiG~~~l~~~~----~~ 511 (634)
..||+++++|++.|.+++..........++. .+.+...+ ..+++++.+ |++||++.+.+.. ..
T Consensus 10 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 89 (158)
T 1vkc_A 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYV 89 (158)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCS
T ss_pred ceeccCCHHHHHHHHHHHHhhhHHhhcCCCCchhhhhhHHHHHHHHhcCCCcEEEEEEcCCCcEEEEEEEEEeccccCCC
Confidence 4699999999999999987654332222333 22233222 147888888 9999999998643 34
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH---HhHHHHHh
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT---RTADWFKS 588 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~---~a~~~Y~k 588 (634)
..++|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+. .+.+||++
T Consensus 90 ~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k 144 (158)
T 1vkc_A 90 KIAYIYDIEVVKWARGLGIGSALL-------------------------RKAEEWAKERGAKKIVLRVEIDNPAVKWYEE 144 (158)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSCEEECCCTTCTHHHHHHH
T ss_pred CEEEEEEEEECHHHhCCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEEeCCCcHHHHHHH
Confidence 578999999999999999999999 89999999999999999762 68999999
Q ss_pred CCCeecccc
Q 006709 589 RGFRECSIE 597 (634)
Q Consensus 589 ~GF~~~~~~ 597 (634)
+||+..+..
T Consensus 145 ~GF~~~~~~ 153 (158)
T 1vkc_A 145 RGYKARALI 153 (158)
T ss_dssp TTCCCCCCC
T ss_pred CCCEeeEEE
Confidence 999987653
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-13 Score=126.82 Aligned_cols=116 Identities=20% Similarity=0.252 Sum_probs=98.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~---~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
.||+++++|++.+.+++.... ..+++.+.+.+.+. .+++++.+|++||++.+.+.. ..++|..++|+|+||
T Consensus 3 ~ir~~~~~D~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~--~~~~i~~~~v~p~~r 76 (160)
T 2cnt_A 3 TISILSTTDLPAAWQIEQRAH----AFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVVL--DEATLFNIAVDPDFQ 76 (160)
T ss_dssp EEEECCGGGHHHHHHHHHHHC----SSCCCHHHHHHSCSTTBCCEEEEETTEEEEEEEEEEET--TEEEEEEEEECGGGC
T ss_pred EEEeCCHHHHHHHHHHHHhhc----ccCCCHHHHHHHhccCccEEEEEECCeEEEEEEEEecC--CceEEEEEEECHHHc
Confidence 689999999999999975432 34567777777663 578888999999999998643 578899999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|++|+ ..+++.+++.|++.+.+.+ ..+.+||+++||+.++.
T Consensus 77 g~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 125 (160)
T 2cnt_A 77 RRGLGRMLL-------------------------EHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATI 125 (160)
T ss_dssp SSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEE
Confidence 999999999 8899999999999999987 47899999999999875
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=9.5e-14 Score=127.65 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=96.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeee-------cCCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------FKEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~-------~~~~~~ei~ 517 (634)
..||+++++|++.+.+++...+..... ....+.+...+ ..++|++.+|++||++.+.+. .....++|.
T Consensus 21 ~~ir~~~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~i~ 99 (165)
T 1s3z_A 21 MDIRQMNKTHLEHWRGLRKQLWPGHPD-DAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLE 99 (165)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCH-HHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred EEEEeCchhhHHHHHHHHHHHhccCCc-HHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccccCCCcEEEE
Confidence 469999999999999998765432211 00112233333 257888999999999999862 123678999
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.++|+|+|||+|+|++|+ +++++++++.|+..+.+.+ ..+.+||+++||+.
T Consensus 100 ~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 154 (165)
T 1s3z_A 100 GIFVLPSFRQRGVAKQLI-------------------------AAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEE 154 (165)
T ss_dssp EEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred EEEEChhhcCCcHHHHHH-------------------------HHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeE
Confidence 999999999999999999 8999999999999999988 46899999999998
Q ss_pred ccc
Q 006709 594 CSI 596 (634)
Q Consensus 594 ~~~ 596 (634)
.+.
T Consensus 155 ~~~ 157 (165)
T 1s3z_A 155 TER 157 (165)
T ss_dssp EEE
T ss_pred eee
Confidence 764
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=124.41 Aligned_cols=118 Identities=20% Similarity=0.220 Sum_probs=94.2
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqG 529 (634)
.+|+++++|++.+.+++..+....+....... ..-..+++++.+|++||++.+.+.. ...+|..++|+|+|||+|
T Consensus 5 i~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~vG~~~~~~~~--~~~~i~~~~v~~~~rg~G 79 (140)
T 1y9w_A 5 HIENGTRIEGEYIKNKVIQYNMSILTDEVKQP---MEEVSLVVKNEEGKIFGGVTGTMYF--YHLHIDFLWVDESVRHDG 79 (140)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHTSCGGGCCC---CEEEEEEEECTTCCEEEEEEEEEET--TEEEEEEEEECGGGTTTT
T ss_pred EeccCCHHHHHHHHHHHHHhhhccCchhhhhh---ccceEEEEECCCCeEEEEEEEEEec--CEEEEEEEEEcHHHcCCC
Confidence 46889999999999998875544433211100 0112566777789999999998653 678999999999999999
Q ss_pred HHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccc
Q 006709 530 QGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 530 iG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~ 597 (634)
+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+..+..
T Consensus 80 ig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~ 124 (140)
T 1y9w_A 80 YGSQLL-------------------------HEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVV 124 (140)
T ss_dssp HHHHHH-------------------------HHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEE
T ss_pred HHHHHH-------------------------HHHHHHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEE
Confidence 999999 8999999999999999888 468999999999997753
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-14 Score=130.77 Aligned_cols=124 Identities=18% Similarity=0.161 Sum_probs=82.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccC---CHHH----HHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRR---TDEE----LLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~---~~~~----~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei 516 (634)
..||+++++|++.|.+|+......... ... +.++ +...+ ..+++++.+|++||++.+.+......++|
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i 93 (159)
T 2aj6_A 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVNI 93 (159)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEEE
T ss_pred hhcCCCchhhHHHHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHhCCCcEEEEEEECCeEEEEEEEEeecCCCEEEE
Confidence 469999999999999998866543321 111 1112 22222 25788889999999999885555678999
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCe
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+.+||+++||+
T Consensus 94 ~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 148 (159)
T 2aj6_A 94 ELLYVEPQFRKLGIATQLK-------------------------IALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQ 148 (159)
T ss_dssp EEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSCCCCC------------------
T ss_pred EEEEECHHHccCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHCCCE
Confidence 9999999999999999999 8999999999999988877 3589999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
..+..
T Consensus 149 ~~~~~ 153 (159)
T 2aj6_A 149 VSHVK 153 (159)
T ss_dssp -----
T ss_pred EeeeE
Confidence 87754
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-13 Score=128.28 Aligned_cols=146 Identities=12% Similarity=0.090 Sum_probs=103.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc---C-ccCCHHHHHhhc-------CcEEEE-EECCeEEEEEEEeeecC----CC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----EK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~---~-~~~~~~~~~~~l-------~~~~V~-~~~g~iiG~~~l~~~~~----~~ 512 (634)
..||+++++|++.+.+++........ . .+.+.+++...+ ..++|+ +.+|++||++.+.+... ..
T Consensus 11 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~iiG~~~~~~~~~~~~~~~ 90 (182)
T 2jlm_A 11 RFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAYKY 90 (182)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHCSSSCCSSCCCHHHHHHHHHHHHHTTCCEEEEEETTSCEEEEEEEEESSSSGGGTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhcceeeccCCCCCHHHHHHHHHhccccCceEEEEEccCCcEEEEEEecccCCcccccc
Confidence 46999999999999999876543221 1 233444432221 246777 66899999999875432 13
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.+++ .++|+|+|||||+|++|+ +.++++++++|+..|.+.+ .+|++||+|
T Consensus 91 ~~e~-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek 144 (182)
T 2jlm_A 91 TVEH-SVYIHKDYRGLGLSKHLM-------------------------NELIKRAVESEVHVMVGCIDATNVASIQLHQK 144 (182)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH
T ss_pred eeEE-EEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHCCceEEEEEEeCCCHHHHHHHHH
Confidence 4565 799999999999999999 8888999999999999988 479999999
Q ss_pred CCCeecccccchhHhhhhccCCCCceEEEeecCCCC
Q 006709 589 RGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDT 624 (634)
Q Consensus 589 ~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~~~~ 624 (634)
+||+.++... ... ..+......++|.++.+++
T Consensus 145 ~GF~~~g~~~--~~~--~~~g~~~d~~~m~~~~~~~ 176 (182)
T 2jlm_A 145 LGFIHSGTIQ--QAG--FKFGRWLDAAFYQLTLDTP 176 (182)
T ss_dssp TTCEEEEEEE--EEE--EETTEEEEEEEEEEECSCC
T ss_pred CCCcEEEEee--eee--eeCCEEEEeeeehhhhccC
Confidence 9999987531 100 1122223456776665443
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.8e-14 Score=125.73 Aligned_cols=123 Identities=19% Similarity=0.208 Sum_probs=95.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcc---cCccCCHHHHHhhcC-----cEEEEE--ECCeEEEEEEEeeec----CCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALD-----SFYVVE--REGQIIACAALFPFF----KEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~l~-----~~~V~~--~~g~iiG~~~l~~~~----~~~~~ 514 (634)
..||+++++|++.+.+++....... +...++.+.+...+. .++|++ .+|++||++.+.+.. ....+
T Consensus 5 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 84 (152)
T 1qsm_A 5 ITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDKI 84 (152)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCEE
T ss_pred EEEEEcchhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHhcCCCceeEEEEEeCCCCeEEEEEEEEecCCccccccce
Confidence 4699999999999999986532221 112223334444432 477888 789999999997542 34678
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+|+|||||+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++|
T Consensus 85 ~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~G 139 (152)
T 1qsm_A 85 YINDLYVDENSRVKGAGGKLI-------------------------QFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVG 139 (152)
T ss_dssp EEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHE
T ss_pred EEEEEEechhcccCCHHHHHH-------------------------HHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcC
Confidence 999999999999999999999 8999999999999998877 47899999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|++...
T Consensus 140 f~~~~~ 145 (152)
T 1qsm_A 140 YKAPKI 145 (152)
T ss_dssp EECSEE
T ss_pred CCccce
Confidence 997544
|
| >1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.50 E-value=7.1e-14 Score=127.22 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=95.0
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccC-CHHHHHh-hcCcEEEEEECCeEEEEEEEeeecCC-CeEEEEEEEECCC
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLK-ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPE 524 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~-~l~~~~V~~~~g~iiG~~~l~~~~~~-~~~ei~~l~V~p~ 524 (634)
+..+|+++++|++.+.++...........+. ..+.... .-..+++++.+|++||++.+.+.... ..++|..++|+|+
T Consensus 7 ~~~ir~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~ 86 (150)
T 1xeb_A 7 CKHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSA 86 (150)
T ss_dssp EEEGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGG
T ss_pred eeeehhCCHHHHHHHHHHHHHHhhcccCCChhhhhhhhccCCcEEEEEEECCEEEEEEEEEccCCCCCeEEEEEEEECHH
Confidence 3569999999999999997765433222111 0000000 12356777889999999999865322 5689999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|+ +++++.+++. |+..+.+.+ ..+.+||+++||+..+.
T Consensus 87 ~rg~Gig~~ll-------------------------~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~Gf~~~~~ 135 (150)
T 1xeb_A 87 ARGQGLGHQLM-------------------------ERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTE 135 (150)
T ss_dssp GTTSSHHHHHH-------------------------HHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSC
T ss_pred HccCCHHHHHH-------------------------HHHHHHHHHhcCCCEEEEechhHHHHHHHHcCCEECCc
Confidence 99999999999 8889999887 999999888 57899999999999874
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-13 Score=125.59 Aligned_cols=122 Identities=20% Similarity=0.244 Sum_probs=93.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEE-EECCeEEEEEEEeeecCC----C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFKE----K 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~-~~~g~iiG~~~l~~~~~~----~ 512 (634)
..||+++++|++.+.+++......... .+.+.+++...+ ..++|+ +.+|++||++.+.++... .
T Consensus 3 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (172)
T 2j8m_A 3 ASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFRG 82 (172)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTT
T ss_pred eEEEECCHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHhhcccCceEEEEEcCCCeEEEEEEEecccCCcccCc
Confidence 368999999999999998765443211 123444432222 246777 668999999998765321 2
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
..++ .++|+|+|||||+|++|+ +.++++|++.|+..|.+.+ ..|.+||+|
T Consensus 83 ~~~~-~~~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k 136 (172)
T 2j8m_A 83 TVEH-SVYVRDDQRGKGLGVQLL-------------------------QALIERARAQGLHVMVAAIESGNAASIGLHRR 136 (172)
T ss_dssp EEEE-EEEECTTCTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHH
T ss_pred eEEE-EEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHCCccEEEEEEcCCCHHHHHHHHH
Confidence 4555 799999999999999999 8999999999999999987 469999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||+.++.
T Consensus 137 ~GF~~~g~ 144 (172)
T 2j8m_A 137 LGFEISGQ 144 (172)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEee
Confidence 99999875
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=7e-14 Score=127.76 Aligned_cols=122 Identities=24% Similarity=0.290 Sum_probs=96.2
Q ss_pred cccccCccchHH-HHHHhHHHHHHcccCccCCHHHHHhhc---------CcEEEEEE--CCeEEEEEEEeeec-----CC
Q 006709 449 EGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----KE 511 (634)
Q Consensus 449 e~iR~a~~~D~~-~i~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~V~~~--~g~iiG~~~l~~~~-----~~ 511 (634)
..||+++++|++ .+.+++..+.... ..+.+++.+.+ ..++|++. +|++||++.+.+.. ..
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~~~~~~~~~~ 98 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSVG---NLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAG 98 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCCT---TCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEEEEECSHHHHC
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEEecccccCCCC
Confidence 469999999999 5988876543322 23445554433 24678887 99999999997421 23
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
..++|..++|+|+|||||+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++|
T Consensus 99 ~~~~i~~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~G 153 (165)
T 4ag7_A 99 SRGRVEDVVVDTEMRRQKLGAVLL-------------------------KTLVSLGKSLGVYKISLECVPELLPFYSQFG 153 (165)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCSEEEECSCGGGHHHHHTTT
T ss_pred cEEEEEEEEECHHhcCCCHHHHHH-------------------------HHHHHHHHHcCCeEEEEEeCHHHHHHHHHCC
Confidence 468899999999999999999999 8999999999999999988 45789999999
Q ss_pred Ceeccccc
Q 006709 591 FRECSIEM 598 (634)
Q Consensus 591 F~~~~~~~ 598 (634)
|+..+..+
T Consensus 154 F~~~~~~~ 161 (165)
T 4ag7_A 154 FQDDCNFM 161 (165)
T ss_dssp CEECCCCE
T ss_pred CCcccchh
Confidence 99877543
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=4.6e-13 Score=122.01 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=96.2
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCc--------cCC----HHHHHhhc---C---cEEEEE-ECCeEEEEEEEeeecC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALV--------RRT----DEELLKAL---D---SFYVVE-REGQIIACAALFPFFK 510 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~--------~~~----~~~~~~~l---~---~~~V~~-~~g~iiG~~~l~~~~~ 510 (634)
.||+++++|++.+.+++.......+.. ..+ .+.+...+ . .++++. .+|++||++.+.+...
T Consensus 2 ~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~ 81 (174)
T 2cy2_A 2 RIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDRA 81 (174)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECCS
T ss_pred ceeecCHhHHHHHHHHHHHHHHHhhcCcCCHHHHhhhhhhhhHHHHHHHHcCCCcCceEEEEEecCCEEEEEEEEecCCC
Confidence 589999999999999987654433210 111 12222222 2 367776 7899999999986542
Q ss_pred ----CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHh
Q 006709 511 ----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRT 582 (634)
Q Consensus 511 ----~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a 582 (634)
...++|..++|+|+|||+|+|++|+ +.+++.+++.|++.+.+.+ ..+
T Consensus 82 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~n~~a 136 (174)
T 2cy2_A 82 SGFPGYTAELWAIYVLPTWQRKGLGRALF-------------------------HEGARLLQAEGYGRMLVWVLKENPKG 136 (174)
T ss_dssp CSCTTCCEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHH
T ss_pred CCCCCCceEEEEEEECHHHhCcCHHHHHH-------------------------HHHHHHHHhCCCceEEEEEECCChhH
Confidence 3678999999999999999999999 8888999999999999887 478
Q ss_pred HHHHHhCCCeeccccc
Q 006709 583 ADWFKSRGFRECSIEM 598 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~~~ 598 (634)
.+||+++||+..+...
T Consensus 137 ~~~y~k~Gf~~~~~~~ 152 (174)
T 2cy2_A 137 RGFYEHLGGVLLGERE 152 (174)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCeeeceEE
Confidence 9999999999988643
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=129.08 Aligned_cols=123 Identities=19% Similarity=0.325 Sum_probs=93.5
Q ss_pred ccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeec----CCCeE
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF----KEKCG 514 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~V~~~~g~iiG~~~l~~~~----~~~~~ 514 (634)
-..||+++++|++.+.+++........ .+.+.+...+.+ ..++|++.+|++||++.+.+.. ....+
T Consensus 23 ~~~ir~~~~~D~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 101 (176)
T 3fyn_A 23 SPQVRTAHIGDVPVLVRLMSEFYQEAG-FALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGGLRG 101 (176)
T ss_dssp GGGEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHCGGGEEEEEEEETTEEEEEEEEEEEEETTTTEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHhcC-CCcccHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEEEEeccccccCCceE
Confidence 357999999999999999876554322 122333322222 2678899999999999997532 23468
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+|+|||+|+|++|+ +.+++++++.|+..+.+.+ .++.+||+++|
T Consensus 102 ~i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~G 156 (176)
T 3fyn_A 102 FVDDFFVRPNARGKGLGAAAL-------------------------QTVKQGCCDLGVRALLVETGPEDHPARGVYSRAG 156 (176)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCCEECCCC--------HHHHTT
T ss_pred EEEEEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCC
Confidence 999999999999999999999 9999999999999999888 46899999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 157 F~~~~~ 162 (176)
T 3fyn_A 157 FEESGR 162 (176)
T ss_dssp CCCCCC
T ss_pred Ceeccc
Confidence 998654
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-13 Score=125.45 Aligned_cols=124 Identities=20% Similarity=0.180 Sum_probs=94.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHH----hhc--CcEEEEEECCeEEEEEEEeeec----CCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL----KAL--DSFYVVEREGQIIACAALFPFF----KEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~----~~l--~~~~V~~~~g~iiG~~~l~~~~----~~~~~ei~~ 518 (634)
..||+++++|++.+.+++..+.........+.+... ..+ ..++++..+|++||++.+.+.. ....++|..
T Consensus 23 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~i~~ 102 (172)
T 2r1i_A 23 EVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILDE 102 (172)
T ss_dssp CCCEECCGGGHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTSSSEEEEEETTTTCEEEEEEEECCTTCSSCEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCeEEEEECCeeEEEEEEEeccCCCCCCceEEEEE
Confidence 469999999999999998754432111122333332 222 2333333399999999987443 245789999
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+.+||+++||+..
T Consensus 103 ~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~ 157 (172)
T 2r1i_A 103 LYVRPGRRGHRLGSALL-------------------------AASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNT 157 (172)
T ss_dssp EECCSSHHHHHHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCBSS
T ss_pred EEECcccccCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEec
Confidence 99999999999999999 8999999999999999888 478999999999987
Q ss_pred ccc
Q 006709 595 SIE 597 (634)
Q Consensus 595 ~~~ 597 (634)
+..
T Consensus 158 ~~~ 160 (172)
T 2r1i_A 158 EPN 160 (172)
T ss_dssp CTT
T ss_pred ccC
Confidence 753
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=129.14 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=101.1
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-CccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec--------------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-------------- 509 (634)
..||+++.+|++.+.++......... ..+++.+++.+.+ ..++|++.+|++||++.+.+..
T Consensus 35 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 114 (207)
T 1kux_A 35 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 114 (207)
T ss_dssp CEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred eEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEECCEEEEEEEEEeecccccccccccccCC
Confidence 46999999999999999765433211 2245666666655 3689999999999999987543
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec-HHhHHHHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT-TRTADWFK 587 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t-~~a~~~Y~ 587 (634)
....++|..++|+|+|||||||++|+ +++++.+++. |+..+.+.+ ..+.+||+
T Consensus 115 ~~~~~~i~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~~~~~~g~~~i~l~~n~~a~~~y~ 169 (207)
T 1kux_A 115 RGHSAHLHALAVHRSFRQQGKGSVLL-------------------------WRYLHHVGAQPAVRRAVLMCEDALVPFYQ 169 (207)
T ss_dssp TCCEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHTTSTTCCEEEEEECGGGHHHHH
T ss_pred CCCEEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCceEEEEeecHHHHHHHH
Confidence 24678999999999999999999999 9999999888 999998877 57999999
Q ss_pred hCCCeecccc
Q 006709 588 SRGFRECSIE 597 (634)
Q Consensus 588 k~GF~~~~~~ 597 (634)
++||+..+..
T Consensus 170 k~GF~~~~~~ 179 (207)
T 1kux_A 170 RFGFHPAGPC 179 (207)
T ss_dssp TTTCEEEEEC
T ss_pred HCCCEECCcc
Confidence 9999998853
|
| >2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.4e-13 Score=122.37 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=91.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhh---cCcEEEEEECCeEEEEEEEeeecC-----CCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA---LDSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~---l~~~~V~~~~g~iiG~~~l~~~~~-----~~~~ei~~l~ 520 (634)
..||+++++|+..|.+.. ....... +..++... -..+++++.+|++||++.+.+... ...++|..++
T Consensus 2 ~~ir~~~~~D~~~l~~~~---~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~ 76 (146)
T 2jdc_A 2 IEVKPINAEDTYELRHRI---LRPNQPI--EACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMA 76 (146)
T ss_dssp CEEEEECGGGGHHHHHHH---TCTTSCG--GGGSCGGGGSTTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHh---cccCCCc--chhhhhcccCCceEEEEEecCCEEEEEEEEecccccccCCCceEEEEEEE
Confidence 368999999988876642 1111111 11111111 235788999999999999986432 2278999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
|+|+|||+|+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+..+..
T Consensus 77 V~p~~rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~~~~~ 129 (146)
T 2jdc_A 77 TLEGYREQKAGSSLI-------------------------KHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEV 129 (146)
T ss_dssp ECTTSTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEE
T ss_pred ECHHHcccCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEccccHHHHHHHcCCEEeccc
Confidence 999999999999999 9999999999999999888 578999999999998764
|
| >3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-13 Score=126.86 Aligned_cols=123 Identities=17% Similarity=0.215 Sum_probs=98.4
Q ss_pred cccccCccchHHHHHHhHHHHH------HcccCccCCHHHHHhhc---------CcEEEEEECCeEEEEEEEeeecCCCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLV------ESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFKEKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~------~~~~~~~~~~~~~~~~l---------~~~~V~~~~g~iiG~~~l~~~~~~~~ 513 (634)
..||+++++|++.+.+++.... ......+.+.+++...+ ..+++++.+|++||++.+.+......
T Consensus 14 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 93 (188)
T 3owc_A 14 LQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNGV 93 (188)
T ss_dssp EEEEECCGGGHHHHHTTCCSHHHHHHHHCTTCCSSCCGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEEEETTTTE
T ss_pred EEEEECcHHHHHHHHHHHhChHHHhhhcCccccCcccHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEEecCCCCE
Confidence 4699999999999999864321 12222233333333322 25788889999999999997656788
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHh
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k 588 (634)
++|..++|+|+|||+|+|++|+ ..+++++.+ .|+..+.+.+ ..+.+||++
T Consensus 94 ~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k 148 (188)
T 3owc_A 94 VRLARIVLAPSARGQGLGLPML-------------------------EALLAEAFADADIERVELNVYDWNAAARHLYRR 148 (188)
T ss_dssp EEEEEEEECGGGTTSSCHHHHH-------------------------HHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHH
T ss_pred EEEEEEEEcHHHhCCChhHHHH-------------------------HHHHHHHHHhhCceEEEEEEecCCHHHHHHHHH
Confidence 9998899999999999999999 899999988 5999999988 479999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||+..+.
T Consensus 149 ~GF~~~~~ 156 (188)
T 3owc_A 149 AGFREEGL 156 (188)
T ss_dssp TTCEEEEE
T ss_pred cCCEEeee
Confidence 99999875
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.8e-13 Score=119.23 Aligned_cols=116 Identities=20% Similarity=0.269 Sum_probs=92.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
..||+++++|++.+.++...... .++..+.+...+ ..+++++.+|++||++.+.+. .....++..++|+|+||
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 77 (143)
T 3bln_A 3 KNVTKASIDDLDSIVHIDIDVIG----NDSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTN-FFDCTFLSLIIVSPTKR 77 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHS----SSTTHHHHHHHHHTTCEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEECTTCC
T ss_pred eeEEECCHhhHHHHHHHHHHccC----chhHHHHHHHHhCCCeEEEEEeCCeEEEEEEEEec-CCCceEEEEEEECHHHc
Confidence 46899999999999999765433 234445554444 468889999999999999865 34678899999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
|||+|++|+ +.+++.+++.+ +.+.+ ..+.+||+++||+.++..
T Consensus 78 g~Gig~~ll-------------------------~~~~~~~~~~~---i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (143)
T 3bln_A 78 RRGYASSLL-------------------------SYMLSHSPTQK---IFSSTNESNESMQKVFNANGFIRSGIV 124 (143)
T ss_dssp SSCHHHHHH-------------------------HHHHHHCSSSE---EEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCChHHHHH-------------------------HHHHHHHhhCC---eEEEEcccCHHHHHHHHHCCCeEeeEE
Confidence 999999999 88888887665 44444 468999999999998763
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.9e-13 Score=125.57 Aligned_cols=122 Identities=22% Similarity=0.332 Sum_probs=89.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc-------------------CcEEEEE--ECCeEEEEEEEee
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------------------DSFYVVE--REGQIIACAALFP 507 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l-------------------~~~~V~~--~~g~iiG~~~l~~ 507 (634)
..||+++++|++.+.+++..+ ......+.+.+.+.+ ..++++. .+|++||++.+..
T Consensus 8 ~~IR~a~~~D~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~ 84 (160)
T 1i12_A 8 FYIRRMEEGDLEQVTETLKVL---TTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 84 (160)
T ss_dssp EEEEECCGGGHHHHHHHHTTT---SCCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEecCCHHHHHHHHHHHHhc---ccCCCCCHHHHHHHHHHHHhccccccccccccccceEEEEEEccCCeEEEEEEEEe
Confidence 369999999999998875321 111122333322211 0135554 5799999988764
Q ss_pred ecC-----CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HH
Q 006709 508 FFK-----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TR 581 (634)
Q Consensus 508 ~~~-----~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~ 581 (634)
... ...++|..++|+|+|||||+|++|| +++++++++.|+..+.+.+ ..
T Consensus 85 ~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~ 139 (160)
T 1i12_A 85 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLI-------------------------DQLVTIGFDYGCYKIILDCDEK 139 (160)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECGG
T ss_pred cccccccCCCceEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEEcChh
Confidence 321 2357899999999999999999999 9999999999999999998 45
Q ss_pred hHHHHHhCCCeeccccc
Q 006709 582 TADWFKSRGFRECSIEM 598 (634)
Q Consensus 582 a~~~Y~k~GF~~~~~~~ 598 (634)
..+||+++||+.++..+
T Consensus 140 n~~fY~k~GF~~~g~~~ 156 (160)
T 1i12_A 140 NVKFYEKCGFSNAGVEM 156 (160)
T ss_dssp GHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHCCCEEcCeee
Confidence 67999999999988653
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-13 Score=125.02 Aligned_cols=122 Identities=18% Similarity=0.236 Sum_probs=79.5
Q ss_pred cccCccchHHHHHHhHHHHHHccc------CccC-------CHHHHHhhc-CcEEEEEECCeEEEEEEEeeec-------
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGA------LVRR-------TDEELLKAL-DSFYVVEREGQIIACAALFPFF------- 509 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~------~~~~-------~~~~~~~~l-~~~~V~~~~g~iiG~~~l~~~~------- 509 (634)
||+++++|++.+.+++........ .... ........- ..++|++.+|++||++.+.+..
T Consensus 5 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 84 (166)
T 3jvn_A 5 IRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSK 84 (166)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHSCC----------CCCHHHHHHCTTEEEEEEESSSSEEEEEEEEEEEECCSSSC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhhcCchhhcchhhHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEeecccccccc
Confidence 899999999999999876542211 1000 111111111 2578888899999999986422
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADW 585 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~ 585 (634)
....++|..++|+|+|||||+|++|+ +.+++++++.|++.+.+.+ ..+.+|
T Consensus 85 ~~~~~~i~~l~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~n~~a~~~ 139 (166)
T 3jvn_A 85 LVMMATIDELYIEKEYRREGVAEQLM-------------------------MRIEQELKDYGVKEIFVEVWDFNKGALEF 139 (166)
T ss_dssp CEEEEEEEEEEECTTTCSSSHHHHHH-------------------------HHHHHHHHTTTCSEEEECCC--CCBC---
T ss_pred CccEEEEEEEEECHHHhccCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEecCCHHHHHH
Confidence 12347899999999999999999999 9999999999999999988 368999
Q ss_pred HHhCCCeecccc
Q 006709 586 FKSRGFRECSIE 597 (634)
Q Consensus 586 Y~k~GF~~~~~~ 597 (634)
|+++||++.+..
T Consensus 140 y~k~GF~~~~~~ 151 (166)
T 3jvn_A 140 YNKQGLNEHIHY 151 (166)
T ss_dssp ------------
T ss_pred HHHcCCeEHHHH
Confidence 999999997654
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=122.52 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=89.7
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
.||+++++|++.+.+++....... .+.+.+.+.+.+ ..+++++.+|++||++.+.+ .....++|..++|+|+||
T Consensus 3 ~ir~~~~~D~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~r 79 (138)
T 2atr_A 3 TIKKQEIVKLEDVLHLYQAVGWTN--YTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPSYQ 79 (138)
T ss_dssp EEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTTSC
T ss_pred EEEEcCccCHHHHHHHHHHcCCCc--hhhhHHHHHHhcCCCeEEEEEEECCeeEEEEEEEe-CCCCeEEEEEEEEchhhc
Confidence 589999999999999975421111 222444555444 25688889999999999874 345678999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHhCCCeecccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k~GF~~~~~~ 597 (634)
|+|+|++|+ +.+++.+++.|+ +.+.+ ..+.+||+++||+..+..
T Consensus 80 g~Gig~~ll-------------------------~~~~~~~~~~~~--~~l~~~~n~~a~~~y~k~Gf~~~~~~ 126 (138)
T 2atr_A 80 RQGIGSSLM-------------------------KEALGNFKEAYQ--VQLATEETEKNVGFYRSMGFEILSTY 126 (138)
T ss_dssp SSSHHHHHH-------------------------HHHHGGGTTCSE--EECCCCCCHHHHHHHHHTTCCCGGGG
T ss_pred CCCHHHHHH-------------------------HHHHHHHHhcCe--EEEEeCCChHHHHHHHHcCCccccee
Confidence 999999999 888888888876 34444 579999999999987653
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=126.13 Aligned_cols=122 Identities=14% Similarity=0.139 Sum_probs=95.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-----ccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecC---CCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK---EKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-----~~~~~~~~~~~l~------~~~V~~~~g~iiG~~~l~~~~~---~~~~ 514 (634)
..||+++++|++.+.+++......... ...+.+.+.+.+. .+++++.++++||++.+.+... ...+
T Consensus 5 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~ 84 (169)
T 3g8w_A 5 NNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKA 84 (169)
T ss_dssp CCEEECCGGGHHHHHHHHHTCCCTTCHHHHHHHHCCHHHHHHHHSTTCTTEEEEEEESSSCEEEEEEEEECCSTTTTTEE
T ss_pred eEEEecChHHHHHHHHHHHHhhhhcccCCccccccCHHHHHHHhCCCCcceEEEEEEECCEEEEEEEEEeccccccCceE
Confidence 579999999999999986432211100 1223444555442 4678888999999999986532 2578
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+| ||||+|++|+ +.+++++++.|++.+.+.+ .++.+||+|+|
T Consensus 85 ~i~~~~v~~--rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~G 137 (169)
T 3g8w_A 85 ILENNFVKN--NDEIVNRELI-------------------------NHIIQYAKEQNIETLMIAIASNNISAKVFFSSIG 137 (169)
T ss_dssp EEEEEEEGG--GCHHHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTT
T ss_pred EEEEEEEcc--CCCcHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcC
Confidence 999999999 9999999999 9999999999999999877 57999999999
Q ss_pred Ceecccc
Q 006709 591 FRECSIE 597 (634)
Q Consensus 591 F~~~~~~ 597 (634)
|+..+..
T Consensus 138 F~~~g~~ 144 (169)
T 3g8w_A 138 FENLAFE 144 (169)
T ss_dssp CEEEEEE
T ss_pred CEEeeee
Confidence 9998763
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.8e-13 Score=119.22 Aligned_cols=117 Identities=12% Similarity=0.130 Sum_probs=93.2
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~---~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
.||. +++|++.+.+++.... ..+++.+.+.+.+. .++++..++++||++.+.+. ....++|..++|+|+||
T Consensus 3 ~i~~-~~~d~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 76 (133)
T 1y7r_A 3 KVTY-DIPTCEDYCALRINAG----MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGD-GGTVFQIVDIAVLKSYQ 76 (133)
T ss_dssp EEEC-SCCCHHHHHHHHHHTT----CCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEEC-SSSEEEEEEEEECGGGC
T ss_pred eEEe-cccCHHHHHHHHHhCC----CCCcCHHHHHhhCCcCceEEEEEECCEEEEEEEEEcc-CCCeEEEEEEEEcHHHh
Confidence 4666 7899999999975432 23467777777663 45588899999999998753 45678999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHhCCCeecccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k~GF~~~~~~ 597 (634)
|||+|++|+ +.+++.+++.|++.+.+.+ ..+.+||+++||+..+..
T Consensus 77 g~Gig~~ll-------------------------~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~~~ 125 (133)
T 1y7r_A 77 GQAYGSLIM-------------------------EHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEPD 125 (133)
T ss_dssp SSSHHHHHH-------------------------HHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTTT
T ss_pred cCchHHHHH-------------------------HHHHHHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECCCC
Confidence 999999999 8888999888877655554 568999999999997643
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=6.6e-14 Score=129.36 Aligned_cols=141 Identities=21% Similarity=0.278 Sum_probs=105.4
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC-------ccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~-------~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
.||+++++| +.+.+++......... .....+.+...-..+++++.+|++||++.+.+. ....++|..++|+
T Consensus 2 ~iR~~~~~D-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V~ 79 (159)
T 1yx0_A 2 HIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRTS 79 (159)
T ss_dssp CEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCCS
T ss_pred eeEEcCcCC-HHHHHHHHHHHHHhhccCCcchhhhhhHHHhcCCCceEEEEEECCEEEEEEEEEEc-CCCcEEEEEEEEC
Confidence 589999999 9999987643322111 111223332222468888899999999999865 3567899999999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH------HhHHHHHhCCCeeccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSI 596 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~------~a~~~Y~k~GF~~~~~ 596 (634)
|+|||+|+|++|+ +.+++.+++.|+..+.+.+. .+.+||+++||+..+.
T Consensus 80 p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~ 134 (159)
T 1yx0_A 80 ASHLRKGVAKQVL-------------------------QHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEP 134 (159)
T ss_dssp TTTCCSCHHHHHH-------------------------HHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCC
T ss_pred HhhcCCCHHHHHH-------------------------HHHHHHHHhCCCcEEEEEecccccCchHHHHHHHcCCEEccc
Confidence 9999999999999 88889998889999998762 5889999999999764
Q ss_pred ccchhHhhhhccCCCCceEEEeecCCCC
Q 006709 597 EMIPEERRKRINLSRNSKYYMKKLLPDT 624 (634)
Q Consensus 597 ~~~~~~~~~~~~~~~~s~~~~k~l~~~~ 624 (634)
. ..|....++.++||.+.+.+
T Consensus 135 ~-------~~~~~~~~~~~~~~~~~~~~ 155 (159)
T 1yx0_A 135 F-------ADYGEDPNSVFMTKKLLEHH 155 (159)
T ss_dssp C-------TTSCCCTTCCCEEECC----
T ss_pred c-------ccccCCCcchhhhHHHHhhc
Confidence 2 23556678899999988654
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.9e-13 Score=122.53 Aligned_cols=120 Identities=19% Similarity=0.249 Sum_probs=95.5
Q ss_pred ccccc-CccchHHHHHHhHHHHHHcccCcc----CCHHHHHhhc-----C--cEEEEEECCeEEEEEEEeeecC-CCeEE
Q 006709 449 EGTRT-AKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL-----D--SFYVVEREGQIIACAALFPFFK-EKCGE 515 (634)
Q Consensus 449 e~iR~-a~~~D~~~i~~l~~~~~~~~~~~~----~~~~~~~~~l-----~--~~~V~~~~g~iiG~~~l~~~~~-~~~~e 515 (634)
..||+ ++++|++.+.+++... ..... .+.+.+...+ . .+++++.+|++||++.+.+... ...++
T Consensus 20 ~~ir~~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 96 (177)
T 2r7h_A 20 VAFRRQVLPQDALLVRRVVEST---GFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPATEGTYD 96 (177)
T ss_dssp EEEECSCCTTHHHHHHHHHHHT---SCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTSSSEEE
T ss_pred eEEccCCCHHHHHHHHHHHHhh---CccCcchhhhHHHHHHHHHhhccCCCeEEEEEEECCeEEEEEEEEeccCCCCeEE
Confidence 46999 9999999999997642 11111 1233333333 1 5788889999999999986532 46789
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSR 589 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~ 589 (634)
|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+.+||+++
T Consensus 97 i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~ 151 (177)
T 2r7h_A 97 LYWIAVAPHRQHSGLGRALL-------------------------AEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERA 151 (177)
T ss_dssp EEEEEECTTTTTTTHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHT
T ss_pred EEEEEECHHHhCCCHHHHHH-------------------------HHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHc
Confidence 99999999999999999999 8999999999999999876 3689999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+.++.
T Consensus 152 Gf~~~~~ 158 (177)
T 2r7h_A 152 GFSAEAV 158 (177)
T ss_dssp TCEEEEE
T ss_pred CCEeccc
Confidence 9999876
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-12 Score=123.82 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=94.9
Q ss_pred cccccCccchHHHHHHhHHHHHH----cccC------ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE----SGAL------VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------ 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~----~~~~------~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~------ 510 (634)
..||+++++|++.+.+++..... .+.. ...+.+.+...+ ..++|++.+|++||++.+.+...
T Consensus 20 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~ 99 (201)
T 2pc1_A 20 MQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDAI 99 (201)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTCSTTCSSCHHHHHHHHHHTCEEEEEETTEEEEEEEEEEECCGGGGGC
T ss_pred cEEEEcCHHHHHHHHHHHHHHHHHHHHhCCCCCccccCCCCHHHHHHHHhcCceEEEEECCeEEEEEEEecCCchhhccc
Confidence 46999999999999999865431 1110 112334555544 46788889999999999986432
Q ss_pred ---------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec--
Q 006709 511 ---------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-- 579 (634)
Q Consensus 511 ---------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-- 579 (634)
.+.+++..++|+|+|||+|+|++|+ +.+++ +.|++.+.+.+
T Consensus 100 ~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~---~~g~~~i~l~v~~ 151 (201)
T 2pc1_A 100 YEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFL-------------------------QGLIE---GHKGPDFRCDTHE 151 (201)
T ss_dssp BSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHH-------------------------HHHHH---HSCCSEEEEEECT
T ss_pred cccccccCCCcEEEEEEEEECHHHhCCCHHHHHH-------------------------HHHHH---hCCCceEEEEEec
Confidence 1567899999999999999999999 77766 78999999988
Q ss_pred --HHhHHHHHhCCCeecccccc
Q 006709 580 --TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 580 --~~a~~~Y~k~GF~~~~~~~~ 599 (634)
.++.+||+++||+.++....
T Consensus 152 ~N~~a~~~y~k~GF~~~~~~~~ 173 (201)
T 2pc1_A 152 KNVTMQHILNKLGYQYCGKVPL 173 (201)
T ss_dssp TCHHHHHHHHHTTCEEEEEECS
T ss_pred CCHHHHHHHHHCCCEEEEEEEe
Confidence 35999999999999887544
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.5e-12 Score=118.13 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=102.4
Q ss_pred cccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
..+++++|++.+.++...+... . ...+.+.+...+ ..+++++.+|++||++.+.+.......++..++|+|+||
T Consensus 15 ~~~~~~~d~~~l~~l~~~f~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~r 92 (168)
T 1z4r_A 15 TPKANRRVLLWLVGLQNVFSHQ-L-PRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQ 92 (168)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHH-C-TTSCHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGC
T ss_pred CCCCchhHHHHHHHHHHhccCc-C-ccccHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCCceEEEEEEECHHHh
Confidence 4667889999999985222222 1 122334333332 367888899999999999877666678999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccccchhHhhh
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRK 605 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~~~~~~~ 605 (634)
|||+|++|+ +.+++++++.|+..+.... ..+.+||+++||+..+. ++.....
T Consensus 93 g~Gig~~ll-------------------------~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~GF~~~~~--~~~~~~~ 145 (168)
T 1z4r_A 93 VKGYGTHLM-------------------------NHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIK--VPKSRYL 145 (168)
T ss_dssp SSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCC--SCHHHHT
T ss_pred CCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEeCChHHHHHHHHCCCcEeec--cccchhh
Confidence 999999999 8899999999999875333 67999999999998764 3433222
Q ss_pred hccCCCCceEEE-eecCC
Q 006709 606 RINLSRNSKYYM-KKLLP 622 (634)
Q Consensus 606 ~~~~~~~s~~~~-k~l~~ 622 (634)
.|.......++| |.|.|
T Consensus 146 ~y~g~~~d~~~m~~~l~~ 163 (168)
T 1z4r_A 146 GYIKDYEGATLMECELNP 163 (168)
T ss_dssp TTSCCCTTCEEEEEECCC
T ss_pred hhhhhcCCceEEEEecCC
Confidence 222334455666 55544
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-13 Score=124.82 Aligned_cols=125 Identities=14% Similarity=0.196 Sum_probs=91.9
Q ss_pred cccccCccchHHHHHHhHHH-HHHcc-cCccCCH--------HHHHhhc-------C-cEEEEEEC-CeEEEEEEEeeec
Q 006709 449 EGTRTAKVTDLSGIKQIIQP-LVESG-ALVRRTD--------EELLKAL-------D-SFYVVERE-GQIIACAALFPFF 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~-~~~~~-~~~~~~~--------~~~~~~l-------~-~~~V~~~~-g~iiG~~~l~~~~ 509 (634)
..||+++++|++.+.+++.. +.... ....++. +.+...+ . .+++++.+ |++||++.+.+..
T Consensus 3 l~lR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~ 82 (158)
T 1on0_A 3 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 82 (158)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred eeeeeCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEcCCCCceEEEEEEecC
Confidence 35899999999999987633 21110 0011221 1222222 1 35666656 8999999887543
Q ss_pred --CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhH
Q 006709 510 --KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTA 583 (634)
Q Consensus 510 --~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~ 583 (634)
....+++..++|+|+|||||+|++|+ +.+++++++.|++.|.+.+ .+|+
T Consensus 83 ~~~~~~~~i~~~~v~~~~rg~G~g~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~ 137 (158)
T 1on0_A 83 EHPQQEAFIYDFGLYEPYRGKGYAKQAL-------------------------AALDQAARSMGIRKLSLHVFAHNQTAR 137 (158)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHTCCEEEECCCTTCHHHH
T ss_pred CCCCCeEEEEEEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEecCCHHHH
Confidence 12568888999999999999999999 8888999899999999998 4799
Q ss_pred HHHHhCCCeeccccc
Q 006709 584 DWFKSRGFRECSIEM 598 (634)
Q Consensus 584 ~~Y~k~GF~~~~~~~ 598 (634)
+||+|+||+..+..|
T Consensus 138 ~~Y~k~GF~~~g~~~ 152 (158)
T 1on0_A 138 KLYEQTGFQETDVVM 152 (158)
T ss_dssp HHHHHTTCCCCCCCC
T ss_pred HHHHHCCCEEEeEEE
Confidence 999999999987543
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-13 Score=125.85 Aligned_cols=124 Identities=12% Similarity=0.182 Sum_probs=96.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC--ccCCH--------HHHHhhc--------CcEEEEEEC-CeEEEEEEEeeec
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFPFF 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~--~~~~~--------~~~~~~l--------~~~~V~~~~-g~iiG~~~l~~~~ 509 (634)
..||+++++|++.+.+++......... ..++. +.+...+ ..+++++.+ |++||++.+.+..
T Consensus 27 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~ 106 (180)
T 1ufh_A 27 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 106 (180)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhhhhhccCCCcchhhhhhhHHHHHHHHHhhcCCCCeeEEEEEcCCCCEEEEEEEEecC
Confidence 579999999999999997653321110 11111 2233322 147788877 9999999998654
Q ss_pred C--CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhH
Q 006709 510 K--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTA 583 (634)
Q Consensus 510 ~--~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~ 583 (634)
. ...++|..++|+|+|||||+|++|+ +.+++++++.|++.+.+.+ ..+.
T Consensus 107 ~~~~~~~~i~~~~V~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~N~~a~ 161 (180)
T 1ufh_A 107 EHPQQEAFIYDFGLYEPYRGKGYAKQAL-------------------------AALDQAARSMGIRKLSLHVFAHNQTAR 161 (180)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEECCCTTCHHHH
T ss_pred CCCCCcEEEEEEEECHhhcCCChHHHHH-------------------------HHHHHHHHHCCCCEEEEEeccCcHHHH
Confidence 2 3678999999999999999999999 8899999999999999988 4799
Q ss_pred HHHHhCCCeecccc
Q 006709 584 DWFKSRGFRECSIE 597 (634)
Q Consensus 584 ~~Y~k~GF~~~~~~ 597 (634)
+||+++||+.++..
T Consensus 162 ~~y~k~GF~~~~~~ 175 (180)
T 1ufh_A 162 KLYEQTGFQETDVV 175 (180)
T ss_dssp HHHHHTTCCCCCCC
T ss_pred HHHHHCCCEEeeeE
Confidence 99999999998763
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=5e-13 Score=130.37 Aligned_cols=121 Identities=18% Similarity=0.323 Sum_probs=95.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec---------------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF--------------- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~--------------- 509 (634)
..||+++++|++.|.+|+...+... ..++.+.+...+ ..++|++.+|++||++.+.+..
T Consensus 13 ~~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~~~ 90 (224)
T 2ree_A 13 YNLRHPKIEDLRDLIALETLCWSEN--LQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVPL 90 (224)
T ss_dssp EEEECCCGGGHHHHHHHHHHHSCTT--TCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTGGG
T ss_pred eEEEECCHHHHHHHHHHHHHhccCc--cccCHHHHHHHHHhCCCceEEEEECCEEEEEEEEeccCchhhchhhcccchhh
Confidence 4699999999999999976543222 235666665554 3578999999999999986532
Q ss_pred ----CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEE--Ee----
Q 006709 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLF--LL---- 578 (634)
Q Consensus 510 ----~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~--l~---- 578 (634)
.....+|..|+|+|+|||||||++|| +++++.+++. |++.+. +.
T Consensus 91 ~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~~g~~~i~~~l~~~~~ 145 (224)
T 2ree_A 91 LHTESGVVVQLLAVNILPELQNQGLGDRLL-------------------------EFMLQYCAQISGVEKVVAVTLCRNY 145 (224)
T ss_dssp GCCTTCSEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHTTSTTCCEEEEEECCSSG
T ss_pred ccCCCCCeEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHhcCccEEEEeccCCcc
Confidence 12457899999999999999999999 9999999996 999998 32
Q ss_pred ---------------------cHHhHHHHHhCCCeeccc
Q 006709 579 ---------------------TTRTADWFKSRGFRECSI 596 (634)
Q Consensus 579 ---------------------t~~a~~~Y~k~GF~~~~~ 596 (634)
..+|++||+++||+.++.
T Consensus 146 ~~~~~~~~~~y~~~~~~~g~~N~~a~~fY~k~GF~~~g~ 184 (224)
T 2ree_A 146 PDYSPMPMAEYIHQKNESGLLVDPLLRFHQIHGAKIEKL 184 (224)
T ss_dssp GGTTTSCHHHHTTCBCTTSCBSSHHHHHHHHTTCEEEEE
T ss_pred ccCCCCCHHHHHHHHhcCCcccCcceeeeecCCeEEEEE
Confidence 135899999999999875
|
| >3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.45 E-value=8.2e-13 Score=121.21 Aligned_cols=122 Identities=13% Similarity=0.091 Sum_probs=95.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC--ccCCHHHHHhhcC-------cEEEEEE--CCeEEEEEEEeeecCCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD-------SFYVVER--EGQIIACAALFPFFKEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~l~-------~~~V~~~--~g~iiG~~~l~~~~~~~~~ei~ 517 (634)
..+|+++++|++.+.+++.......+. .+.+.++....+. .++++.. ++++||++.+.+......+++
T Consensus 8 ~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~~~~~~~~~~~~i- 86 (168)
T 3fbu_A 8 LLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENILVGHIVFHKYFGEHTYEI- 86 (168)
T ss_dssp EEECCCCGGGHHHHHHHHTCTTTTTTSTTCSCCHHHHHHHHHHTTC--CCEEEEEETTTTEEEEEEEEEEEETTTEEEE-
T ss_pred eEEEeCCHHHHHHHHHHhCCHHHHHhCCCCCCCHHHHHHHHHHHHhcccceEEEEECCCCCEEEEEEEEeecCCCcEEE-
Confidence 469999999999999997532111111 2335555555441 2666666 899999999987665677888
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCCCe
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
.++|+|+|||||+|++|+ ..+.+++.+. |++.|.+.+ .++.+||+++||+
T Consensus 87 ~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~ 141 (168)
T 3fbu_A 87 GWVFNPKYFNKGYASEAA-------------------------QATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMR 141 (168)
T ss_dssp EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCE
T ss_pred EEEECHHHhcCCHHHHHH-------------------------HHHHHHHHhhCCceEEEEEeccCChHHHHHHHHCCCe
Confidence 677999999999999999 8888998765 999999988 4799999999999
Q ss_pred eccc
Q 006709 593 ECSI 596 (634)
Q Consensus 593 ~~~~ 596 (634)
.++.
T Consensus 142 ~~g~ 145 (168)
T 3fbu_A 142 REGY 145 (168)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=125.52 Aligned_cols=123 Identities=14% Similarity=0.146 Sum_probs=89.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC------ccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec----CCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL------VRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~------~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~----~~~~~ 514 (634)
..||+++++|++.+.+++..+...... .....+.+...+ ..+++++.+|++||++.+.+.. ....+
T Consensus 27 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 106 (168)
T 1bo4_A 27 IRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEI 106 (168)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred heeeeCCHhHHHHHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEEECCeEEEEEEEEeccCccCCCceE
Confidence 459999999999999998643221110 112334444333 1478888999999999987643 13568
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+|+|||+|+|++|+ +.+++++++.|++.+.+.+ ..+.+||+++|
T Consensus 107 ~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~G 161 (168)
T 1bo4_A 107 YIYDLAVSGEHRRQGIATALI-------------------------NLLKHEANALGAYVIYVQADYGDDPAVALYTKLG 161 (168)
T ss_dssp EEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEECHHHhcCCHHHHHH-------------------------HHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcC
Confidence 999999999999999999999 8899999999999999988 36889999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..++
T Consensus 162 F~~~g~ 167 (168)
T 1bo4_A 162 IREEVM 167 (168)
T ss_dssp ------
T ss_pred Ceeccc
Confidence 998764
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.5e-13 Score=122.01 Aligned_cols=123 Identities=23% Similarity=0.285 Sum_probs=97.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc---CccCCHHHHHhh-c-----CcEEEEEECCe--------EEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA-L-----DSFYVVEREGQ--------IIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~---~~~~~~~~~~~~-l-----~~~~V~~~~g~--------iiG~~~l~~~~~- 510 (634)
..||+++++|++.+.+++........ ..+++.+++... + ..++|++.+++ +||++.+.+...
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ivG~~~~~~~~~~ 83 (171)
T 2b5g_A 4 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 83 (171)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred eEEEECCHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhccCCCcEEEEEEECCCcccccCCceEEEEEEEeecCC
Confidence 46999999999999999876543221 133455665544 2 25788888777 899999975322
Q ss_pred --CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHH
Q 006709 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 --~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~ 584 (634)
...+++..++|+|+|||+|+|++|+ ..+++++++.|++.+.+.+ ..+.+
T Consensus 84 ~~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~N~~a~~ 138 (171)
T 2b5g_A 84 WIGKLLYLEDFFVMSDYRGFGIGSEIL-------------------------KNLSQVAMRCRCSSMHFLVAEWNEPSIN 138 (171)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHTCSEEEEEEETTCHHHHH
T ss_pred cCCceEEEEEEEECHhhhCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEcccCHHHHH
Confidence 2347888999999999999999999 8889999999999999988 47999
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
||+++||+..+.
T Consensus 139 ~y~k~Gf~~~~~ 150 (171)
T 2b5g_A 139 FYKRRGASDLSS 150 (171)
T ss_dssp HHHTTTCEEHHH
T ss_pred HHHHcCCEeccc
Confidence 999999998764
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.6e-13 Score=119.39 Aligned_cols=122 Identities=11% Similarity=0.168 Sum_probs=95.7
Q ss_pred cccccCccchHHHHHHhHHHH--HHccc-CccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec-CCCeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPL--VESGA-LVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF-KEKCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~--~~~~~-~~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~-~~~~~ei 516 (634)
..+|+++++|++.+.+++... ..... ....+.+++.+.+ ..+++++.+|++||++.+.+.. ....++|
T Consensus 12 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i 91 (160)
T 3exn_A 12 LDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAEDATL 91 (160)
T ss_dssp CEEEECCGGGHHHHHHHHHTCHHHHHHTTCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEETCSSTTCEEE
T ss_pred eEEEECChhhHHHHHHHHHhChHHHhccccCCCChHHHHHHHHHhhhCCCceEEEEEECCeEEEEEEeecccCCCCceEE
Confidence 469999999999999997652 11111 1223555554443 2578889999999999998643 3467999
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCe
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
..++|+|+|||+|+|++|+ +.+++.+++ +..+.+.+ ..+.+||+++||+
T Consensus 92 ~~l~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~--~~~i~~~~~~~n~~a~~~y~~~Gf~ 144 (160)
T 3exn_A 92 SLLLIREDHQGRGLGRQAL-------------------------ERFAAGLDG--VRRLYAVVYGHNPKAKAFFQAQGFR 144 (160)
T ss_dssp EEEEECGGGTTSSHHHHHH-------------------------HHHHHTCTT--CCEEEEEEESSCHHHHHHHHHTTCE
T ss_pred EEEEECHHHcCCCHHHHHH-------------------------HHHHHHHhh--CCeEEEEEeeCCHHHHHHHHHCCCE
Confidence 9999999999999999999 888888877 88888877 4689999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
..+..
T Consensus 145 ~~~~~ 149 (160)
T 3exn_A 145 YVKDG 149 (160)
T ss_dssp EEEEC
T ss_pred EcccC
Confidence 97764
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.4e-13 Score=123.84 Aligned_cols=117 Identities=25% Similarity=0.294 Sum_probs=89.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcc------cCccCCHHHHHh---hc-CcEEEEEECCeEEEEEEEeeecCCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLK---AL-DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~------~~~~~~~~~~~~---~l-~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~ 518 (634)
..||+++++|++.+.+++....... ...+.+.+++.. .. ..++|++.+|++||++.+.+ .+++ .
T Consensus 5 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-----~~~~-~ 78 (160)
T 3f8k_A 5 IKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVGEASLHK-----DGEF-S 78 (160)
T ss_dssp CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC-----------CEEEEEEEETTEEEEEEEEET-----TSBE-E
T ss_pred EEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHHHhccCCceEEEEEECCeEEEEEEeec-----ceEE-E
Confidence 4689999999999999976532211 011223334333 11 24688899999999999982 5567 8
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
++|+|+|||||+|++|+ +.+++++++.|++.+.+.+ .++.+||+++||+..
T Consensus 79 ~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~ 133 (160)
T 3f8k_A 79 LVVHRNYRTLGIGTLLV-------------------------KTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMR 133 (160)
T ss_dssp EEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEE
T ss_pred EEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEE
Confidence 99999999999999999 9999999999999999988 368999999999997
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
+.
T Consensus 134 ~~ 135 (160)
T 3f8k_A 134 FY 135 (160)
T ss_dssp EC
T ss_pred ee
Confidence 64
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=4.5e-13 Score=120.87 Aligned_cols=118 Identities=20% Similarity=0.227 Sum_probs=93.4
Q ss_pred cc-cCccchHHHHHHhHHHHHHcccCccC--CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcC
Q 006709 451 TR-TAKVTDLSGIKQIIQPLVESGALVRR--TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (634)
Q Consensus 451 iR-~a~~~D~~~i~~l~~~~~~~~~~~~~--~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rg 527 (634)
|| .++++|++++.+|+..........+. ..+.+ +.-..+++++.+|++||++.+.+ ....++|..++|+|+|||
T Consensus 3 i~~~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~~~~rg 79 (140)
T 1q2y_A 3 AVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDEL-ENESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRS 79 (140)
T ss_dssp EEEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTT-GGGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTT
T ss_pred eEEecChHHHHHHHHHHHHHhccccCCChHHHHhhc-cCCcEEEEEEECCeEEEEEEEEE--cCCcEEEEEEEEcHHHhc
Confidence 45 45889999999998876544321111 11111 11236788899999999999986 346789999999999999
Q ss_pred CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 528 qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
+|+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+..+.
T Consensus 80 ~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~Gf~~~~~ 124 (140)
T 1q2y_A 80 AGVGGIIM-------------------------KALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp TTHHHHHH-------------------------HHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred cCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEecHHHHHHHHHCCCEEecc
Confidence 99999999 8999999999999999888 67999999999999775
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-12 Score=121.80 Aligned_cols=125 Identities=18% Similarity=0.245 Sum_probs=94.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcc--c-CccC-----CHHHHHhhc--CcEEEEEECCeEEEEEEEeeec---------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG--A-LVRR-----TDEELLKAL--DSFYVVEREGQIIACAALFPFF--------- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~--~-~~~~-----~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~--------- 509 (634)
..||+++++|++.|.+|+....... . ...| ..+.+.+.+ ..++|++.+|++||++.+.+..
T Consensus 19 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~w 98 (188)
T 3h4q_A 19 GMIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDW 98 (188)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHTTCEEEEEETTEEEEEEEEESCCCGGGGGSCC
T ss_pred EEEEecCHhhHHHHHHHHHHHHHHHHhccccccccCCCcHHHHHHhhccCcEEEEEECCEEEEEEEEEccCccccccccc
Confidence 4799999999999999987652111 0 0111 134454444 4789999999999999996432
Q ss_pred ---CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHh
Q 006709 510 ---KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRT 582 (634)
Q Consensus 510 ---~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a 582 (634)
....++|..++|+|+| ||+|++|+ +++++++++.|++.+.+.+ ..+
T Consensus 99 ~~~~~~~~~i~~l~V~p~~--~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a 151 (188)
T 3h4q_A 99 PVNREGAFVIHRLTGSKEY--KGAATELF-------------------------NYVIDVVKARGAEVILTDTFALNKPA 151 (188)
T ss_dssp SSCCTTCEEEEEEECCSSC--TTHHHHHH-------------------------HHHHHHHHHTTCCEEEEEGGGSCGGG
T ss_pred ccCCCCeEEEEEEEECCcc--CcHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEecCCHHH
Confidence 2455889999999999 99999999 9999999999999999997 468
Q ss_pred HHHHHhCCCeecccccch
Q 006709 583 ADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~~~~~ 600 (634)
.+||+++||+.++....+
T Consensus 152 ~~~y~k~GF~~~~~~~~~ 169 (188)
T 3h4q_A 152 QGLFAKFGFHKVGEQLME 169 (188)
T ss_dssp THHHHHTTCEEC------
T ss_pred HHHHHHCCCeEeceEEec
Confidence 999999999998876544
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.43 E-value=9.4e-13 Score=131.13 Aligned_cols=117 Identities=21% Similarity=0.265 Sum_probs=95.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgq 528 (634)
..||+++++|++.+.++.... +..++..+.+ ....+++++.+|++||++.+........++|..++|+|+||||
T Consensus 99 ~~iR~~~~~D~~~i~~l~~~~----~~~~~~~~~~--~~~~~~v~~~~g~lVG~~~~~~~~~~~~~~i~~l~V~p~~Rg~ 172 (228)
T 3ec4_A 99 PGIVALGETDVPEMTALALAT----EPGPWASGTW--RYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGR 172 (228)
T ss_dssp TTCEECCGGGHHHHHHHHHHS----CCSCCCTTGG--GSSCEEEEEETTEEEEEEEECCCSSTTEEEEEEEEECGGGTTS
T ss_pred CEEEECChhCHHHHHHHHHhh----CCCCcChhhc--cCccEEEEEECCEEEEEEEEEEecCCCcEEEEEEEECHHHcCC
Confidence 479999999999999995432 2223332222 2357899999999999999885425678999999999999999
Q ss_pred CHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 529 GiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
|||++|+ +.+++++++.| ..+++.+ ..+.+||+|+||+.++..
T Consensus 173 GiG~~Ll-------------------------~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~ 219 (228)
T 3ec4_A 173 GLAARLI-------------------------RKVIAGMAARG-EVPYLHSYASNASAIRLYESLGFRARRAM 219 (228)
T ss_dssp SHHHHHH-------------------------HHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHH-------------------------HHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEEEEE
Confidence 9999999 89999999999 8888877 469999999999997753
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.3e-12 Score=124.00 Aligned_cols=122 Identities=11% Similarity=0.191 Sum_probs=99.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeec---CCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL---DSFYVVEREGQIIACAALFPFF---KEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~---~~~~~ei~~ 518 (634)
..||+++++|++.+.+++......... ...+.+.+.+.+ ..+++++.+|++||++.+.+.. .....++..
T Consensus 35 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 114 (197)
T 3ld2_A 35 MKISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLDYSSLYPFPSGQHIVTFG 114 (197)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCCTTTCCSCSCCCCHHHHHHHHTTTCEEEEEEESSCEEEEEEEEESCSSGGGTTEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHhccccCCCCccccccHHHHHHhhCCCCeEEEEEeCCCEEEEEEEEeccCCCCCCeEEEEE
Confidence 469999999999999998765433221 225666666655 3688899999999999998642 344567779
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
++|+|+|||+|+|++|+ +.+++.+++. ++.+.+.+ ..+.+||+++||+..
T Consensus 115 ~~V~p~~rg~Gig~~ll-------------------------~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~ 168 (197)
T 3ld2_A 115 IAVAEKERRKGIGRALV-------------------------QIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLE 168 (197)
T ss_dssp EEECGGGTTSSHHHHHH-------------------------HHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred EEEcHHHcCCCHHHHHH-------------------------HHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCEEe
Confidence 99999999999999999 9999999888 99999887 468999999999998
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
+.
T Consensus 169 ~~ 170 (197)
T 3ld2_A 169 AR 170 (197)
T ss_dssp EE
T ss_pred ee
Confidence 75
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=119.32 Aligned_cols=120 Identities=18% Similarity=0.330 Sum_probs=88.6
Q ss_pred cCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccc
Q 006709 477 RRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (634)
Q Consensus 477 ~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~ 551 (634)
.++.+.+...+ ..+++++.++++||++.+.+.......+|..++|+|+|||+|+|++|+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~ll---------------- 94 (160)
T 1qst_A 31 KMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLM---------------- 94 (160)
T ss_dssp TSCHHHHHHHHTSSSEEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEECGGGCSSSHHHHHH----------------
T ss_pred hhHHHHHHHHhhCCCCceEEEEecCCEEEEEEEEEEecCCCeEEEEEEEECHHHcCCCHHHHHH----------------
Confidence 34555444433 246667778899999999877666778999999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEE-eecCCC
Q 006709 552 STNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLPD 623 (634)
Q Consensus 552 ~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~ 623 (634)
+.+++.+++.|+..+.+.. ..+.+||+++||+..+. ++......+.......++| |.|.|+
T Consensus 95 ---------~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~Gf~~~~~--~~~~~~~~~~~~~~~~~~m~~~l~~~ 157 (160)
T 1qst_A 95 ---------NKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHR--MPQEKWKGYIKDYDGGTLMECYIHPY 157 (160)
T ss_dssp ---------HHHHHHHHHTTCCEEEEEECSSSHHHHHHTTCBSSCS--SCHHHHTTTSCCCSSSEEEEEECCTT
T ss_pred ---------HHHHHHHHHCCCcEEEEeCcchhHHHHHHCCCEEeee--eccccceeEEecCCCceEEeeecccC
Confidence 8999999999999887544 46899999999998764 3333333333333445556 777654
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A | Back alignment and structure |
|---|
Probab=99.41 E-value=6.3e-13 Score=125.04 Aligned_cols=120 Identities=28% Similarity=0.338 Sum_probs=94.3
Q ss_pred cccccCccchHHH-HHHhHHHHHHcccCccCCHHHHHhhc-------C-cEEEEEE--CCeEEEEEEEeeec-----CCC
Q 006709 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------D-SFYVVER--EGQIIACAALFPFF-----KEK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~-i~~l~~~~~~~~~~~~~~~~~~~~~l-------~-~~~V~~~--~g~iiG~~~l~~~~-----~~~ 512 (634)
..||+++++|++. +.+++...... .+++.+++.+.+ . .+++++. +|++||++.+.+.. ...
T Consensus 39 ~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ivG~~~~~~~~~~~~~~~~ 115 (184)
T 2o28_A 39 LVLRPLCTADLNRGFFKVLGQLTET---GVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAK 115 (184)
T ss_dssp EEEEECBGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHHHSCEEEEEEEETTTTEEEEEEEEEEEECSHHHHCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHhhc---CCCCHHHHHHHHHHhhcCCCeEEEEEEeCCCCcEEEEEEEEeccccCCCCCC
Confidence 4699999999998 88886543221 234555554433 1 4567777 89999999997532 135
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCC
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 591 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF 591 (634)
.++|..++|+|+|||||+|++|+ +++++++++.|++.+.+.+ ....+||+++||
T Consensus 116 ~~~i~~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF 170 (184)
T 2o28_A 116 RGRVEDVVVSDECRGKQLGKLLL-------------------------STLTLLSKKLNCYKITLECLPQNVGFYKKFGY 170 (184)
T ss_dssp EEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTEEEEEEEECGGGHHHHHTTTC
T ss_pred cEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecHHHHHHHHHCCC
Confidence 68999999999999999999999 8899999999999999988 446899999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+..+.
T Consensus 171 ~~~~~ 175 (184)
T 2o28_A 171 TVSEE 175 (184)
T ss_dssp EECSS
T ss_pred eeecc
Confidence 98765
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=118.45 Aligned_cols=116 Identities=20% Similarity=0.170 Sum_probs=88.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHH--hhcC-cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALD-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~--~~l~-~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~ 525 (634)
+.||.++..|.+.+.++.+.+..... +... .... .+++++.+|++||++.+.+ ....++|..++|+|+|
T Consensus 16 m~ir~~~~~d~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~p~~ 87 (152)
T 2g3a_A 16 MNFVLSDVADAEAEKAIRDPLVAYNL------ARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAM 87 (152)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHHHH------HHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGG
T ss_pred CeEEEecCCCHHHHHHHHHHHHHhhh------hhcCCCCccceEEEEEeCCCeEEEEEEEEE--eCCEEEEEEEEECHHH
Confidence 46888888888888887654432110 1110 0111 2333444899999999885 3467899999999999
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccc
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~ 597 (634)
||||+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+.++..
T Consensus 88 rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~ 136 (152)
T 2g3a_A 88 RGQGIAPKLL-------------------------AMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSL 136 (152)
T ss_dssp CSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEE
T ss_pred cCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecCccHHHHHHHCCCEEeeec
Confidence 9999999999 9999999999999999988 478999999999998753
|
| >2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=4.8e-13 Score=122.98 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=88.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--C--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--D--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~--~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
..||+++++|++.+.++........+... ..+.+.+.. . .+++++.++++||++.+.+.. ....+|..++|+|+
T Consensus 4 l~ir~~~~~D~~~i~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~-~~~~~i~~~~v~~~ 81 (149)
T 2fl4_A 4 IHFEKVTSDNRKAVENLQVFAEQQAFIES-MAENLKESDQFPEWESAGIYDGNQLIGYAMYGRWQ-DGRVWLDRFLIDQR 81 (149)
T ss_dssp CCCCCCCTTTHHHHHTCCCTTCHHHHHHH-HHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEECT-TSCEEEEEEEECGG
T ss_pred EEEEECCHHHHHHHHhhcCCHHHHhccCC-HHHHHHHHhcCcccceEEEEECCeEEEEEEEeecC-CCcEEEEEEEECHH
Confidence 46899999999999888421100001000 011122111 1 356777899999999876432 45678889999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
|||||+|++|+ +.+++++.+ .|++.+.+.+ .+|++||+|+||+.++..
T Consensus 82 ~~g~Gig~~ll-------------------------~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~ 134 (149)
T 2fl4_A 82 FQGQGYGKAAC-------------------------RLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGEL 134 (149)
T ss_dssp GTTSSHHHHHH-------------------------HHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred HcCCCHHHHHH-------------------------HHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEeccc
Confidence 99999999999 888888876 4799999988 479999999999998764
|
| >3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.7e-12 Score=119.23 Aligned_cols=122 Identities=17% Similarity=0.136 Sum_probs=92.6
Q ss_pred cccccCccchHHHHHHhHHHHH--HcccCc-----cCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEeee
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLV--ESGALV-----RRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPF 508 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~--~~~~~~-----~~~~~~~~~~l-----------~~~~V~~~--~g~iiG~~~l~~~ 508 (634)
..||+++++|++.+.+++.... ...+.. ..+.+++...+ ...+++.. +|++||++.+.+.
T Consensus 10 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~ 89 (184)
T 3igr_A 10 YQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNI 89 (184)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHTTTSCCCCGGGGSHHHHHHHHHHHHHHHHTTSCEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEEEecCHHHHHHHHHHHhccHhhcCcCCCCchhhccCHHHHHHHHHHHHhhcccCceEEEEEEECCCCeEEEEEEeeec
Confidence 4699999999999999986521 112211 12444444433 12444444 7899999999865
Q ss_pred cC--CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HH
Q 006709 509 FK--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TR 581 (634)
Q Consensus 509 ~~--~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~ 581 (634)
.. ...+++ .++|+|+|||||+|++|+ +.+++++ ++.|++.|.+.+ .+
T Consensus 90 ~~~~~~~~~i-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~v~~~N~~ 143 (184)
T 3igr_A 90 TRFPFHAGHV-GYSLDSEYQGKGIMRRAV-------------------------NVTIDWMFKAQNLHRIMAAYIPRNEK 143 (184)
T ss_dssp ECTTTCEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEECTTCHH
T ss_pred ccccCceEEE-EEEEChhhccCcHHHHHH-------------------------HHHHHHHHhhCCceEEEEEecCCCHH
Confidence 43 346788 589999999999999999 8888998 778999999988 46
Q ss_pred hHHHHHhCCCeeccc
Q 006709 582 TADWFKSRGFRECSI 596 (634)
Q Consensus 582 a~~~Y~k~GF~~~~~ 596 (634)
+.+||+++||+.++.
T Consensus 144 a~~~y~k~GF~~~g~ 158 (184)
T 3igr_A 144 SAKVLAALGFVKEGE 158 (184)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCEeeee
Confidence 999999999999886
|
| >2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=123.18 Aligned_cols=122 Identities=18% Similarity=0.254 Sum_probs=93.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc-------C-cEEEEEECCeEEEEEEEeeecC---CCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------D-SFYVVEREGQIIACAALFPFFK---EKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l-------~-~~~V~~~~g~iiG~~~l~~~~~---~~~~ 514 (634)
..||+++++|++.+.+++......... ...+.+.+.+.+ . .++|++.+|++||++.+.+... ...+
T Consensus 8 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 87 (177)
T 2vi7_A 8 IRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSG 87 (177)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHTTSSCCSSCCHHHHHHHHTTC-CCTTEEEEEEEETTEEEEEEEEEECSSGGGTTEE
T ss_pred EEEEECCHHHHHHHHHHHhChhhhcccccCCCCCHHHHHHHHhhhcccCCcEEEEEEECCEEEEEEEEecCCccccceEE
Confidence 469999999999999997643322221 111344444433 1 4678888999999999986432 3456
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++ .++|+|+|||||+|++|+ +.+++++++. |+..|.+.+ .+|.+||+|+
T Consensus 88 ~~-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~ 141 (177)
T 2vi7_A 88 SI-GMGVAVAWQGKGVGSRLL-------------------------GELLDIADNWMNLRRVELTVYTDNAPALALYRKF 141 (177)
T ss_dssp EC-TTCCEESSTTTTHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHT
T ss_pred EE-EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHC
Confidence 77 789999999999999999 8888999876 699999988 4799999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 142 GF~~~g~ 148 (177)
T 2vi7_A 142 GFETEGE 148 (177)
T ss_dssp TCEEEEE
T ss_pred CCEEEee
Confidence 9999875
|
| >2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=121.16 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=96.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHh-hc--------CcEEEEEECCeEEEEEEEeeec------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLK-AL--------DSFYVVEREGQIIACAALFPFF------ 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~-~l--------~~~~V~~~~g~iiG~~~l~~~~------ 509 (634)
..||+++++|++.+.+++.......+. ...+.++... .+ ..++|++.+|++||++.+.+..
T Consensus 26 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 105 (202)
T 2bue_A 26 VTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGW 105 (202)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHTTSCGGGCSCCHHHHHHHHCHHHHHTTTEEEEEEEETTEEEEEEEEEEGGGCCTTS
T ss_pred EEEEECCHHHHHHHHHHHcCchhhhhcCCCcccccHHHHHHHHHHhhcCCCCceeEEEEECCEEEEEEEEEEeccccccc
Confidence 469999999999999998643322221 1123333321 11 2578888999999999987531
Q ss_pred -----CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----
Q 006709 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT---- 579 (634)
Q Consensus 510 -----~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t---- 579 (634)
....++|..++|+|+|||+|+|++|+ ..+++++.+ .|++.+.+.+
T Consensus 106 ~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~v~~~N 160 (202)
T 2bue_A 106 WEEETDPGVRGIDQLLANASQLGKGLGTKLV-------------------------RALVELLFNDPEVTKIQTDPSPSN 160 (202)
T ss_dssp STTCCCTTEEEEEEEESCGGGTTSSHHHHHH-------------------------HHHHHHHHTSTTCCEEEECCCTTC
T ss_pred ccccCCCCceEEEEEEEChhhccCChHHHHH-------------------------HHHHHHHHhCCCCcEEEeCcccCC
Confidence 24568999999999999999999999 899999987 5999999987
Q ss_pred HHhHHHHHhCCCeeccccc
Q 006709 580 TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 580 ~~a~~~Y~k~GF~~~~~~~ 598 (634)
..+.+||+++||+..+...
T Consensus 161 ~~a~~~y~k~GF~~~~~~~ 179 (202)
T 2bue_A 161 LRAIRCYEKAGFERQGTVT 179 (202)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCEEeeeec
Confidence 4699999999999987643
|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.6e-13 Score=146.21 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=69.5
Q ss_pred EEecHHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCcccc
Q 006709 237 KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIR 305 (634)
Q Consensus 237 ~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~ 305 (634)
..++.+.|+.+|+.|.|||+++. +.+.+|.+.++ ++|.+|+.+|.+|+||+|+++|||||+ | +++++|+
T Consensus 149 ~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~ 228 (446)
T 3tvi_A 149 EKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTIS 228 (446)
T ss_dssp HHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCS
T ss_pred hHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcc
Confidence 34567899999999999999985 66778887776 599999999999999999999999997 3 4689999
Q ss_pred ccCHHHHHHHH
Q 006709 306 FLTLQEADSLI 316 (634)
Q Consensus 306 ~ls~~e~~~li 316 (634)
+++.+|+.++.
T Consensus 229 ~is~~e~~ela 239 (446)
T 3tvi_A 229 KISYKELRELS 239 (446)
T ss_dssp EEEHHHHHHTT
T ss_pred eeCHHHHHHHH
Confidence 99999888774
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=123.48 Aligned_cols=121 Identities=17% Similarity=0.122 Sum_probs=88.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-CccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
..||+++.+|++.+.++.+.+..... ....+.+.+...+ ..+++++.+|++||++.+.+. ...++|..++|+
T Consensus 5 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V~ 82 (181)
T 3ey5_A 5 IRFQPITTSDVQHYKFMEELLVESFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDF--DEFYYVEHFATN 82 (181)
T ss_dssp CEEEECCTTSHHHHHHHHHHHHHHSCGGGSCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC--SSCEEEEEEEEC
T ss_pred eEEEECccccHHHHHHHHHHHHHhCCccccchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEEEc--CCeEEEEEEEEc
Confidence 57999999999888877665433211 1223434444444 258899999999999999854 467999999999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||||+|++|| +.+++.++...+..+...+ .+|.+||+++||+.++.
T Consensus 83 p~~rg~GiG~~Ll-------------------------~~~~~~a~~~~~l~v~~~~~~~n~~a~~fY~k~GF~~~~~ 135 (181)
T 3ey5_A 83 PALRNGGYGKRTL-------------------------EHLCEFLKRPIVLEVERPVEEMAKRRINFYQRHGFTLWEK 135 (181)
T ss_dssp GGGTTSSHHHHHH-------------------------HHHHHHCCSCEEEEECCTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhcCCCHHHHHH-------------------------HHHHHhhhhCeEEEEeCCCccchHHHHHHHHHCCCEECCc
Confidence 9999999999999 8888888622222222211 24789999999999883
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=117.99 Aligned_cols=114 Identities=21% Similarity=0.309 Sum_probs=93.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
..||+++++|++.+..+. . ..+.+.+...+ ..+++++.+|++||++.+.+. ....++|..++|+|+||
T Consensus 5 ~~ir~~~~~D~~~i~~~~-----~----~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~r 74 (157)
T 1y9k_A 5 VVIERIPKEAIPKSLLLL-----A----DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQ 74 (157)
T ss_dssp CEEEEECGGGCCHHHHHH-----H----CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEEC-STTEEEEEEEEECGGGC
T ss_pred EEEEECCHhHhhhhhccc-----c----CCCHHHHHHHhccCcEEEEEECCEEEEEEEEEcC-CCCEEEEEEEEECHHHc
Confidence 568999999999984431 1 12445555544 468888899999999999854 56788999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
|+|+|++|+ +.+++.+++.|+..+.+.+ ..+.+||+++||+.++..
T Consensus 75 g~Gig~~ll-------------------------~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (157)
T 1y9k_A 75 GKGIGKKLL-------------------------RHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 124 (157)
T ss_dssp SSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEeccc
Confidence 999999999 8899999999999999888 358999999999998753
|
| >4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2.3e-12 Score=125.88 Aligned_cols=125 Identities=16% Similarity=0.123 Sum_probs=92.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcc--------cC-ccCCHHHHH----hhc--CcEEEEEE-CCeEEEEEEEeeec-C-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG--------AL-VRRTDEELL----KAL--DSFYVVER-EGQIIACAALFPFF-K- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~--------~~-~~~~~~~~~----~~l--~~~~V~~~-~g~iiG~~~l~~~~-~- 510 (634)
..||+++++|++++.+++....... .. .....+.+. ..+ ...+|+.+ +|+|||++...+.. .
T Consensus 9 ~~iR~a~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~ 88 (222)
T 4fd5_A 9 IRFETISSKYYDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGVALNGILYGNT 88 (222)
T ss_dssp CEEEECCGGGHHHHHHHHHHHTTTTSHHHHHTTCCCTTTCCHHHHHHHHHHHTTSCCEEEECTTSCEEEEEEEEEEETTS
T ss_pred EEEEECCHHHHHHHHHHHHHhcCCCCccchhhcccCCCcccHHHHHHHHHHHhCCcEEEEEeCCCCEEEEEEeccccCCc
Confidence 4699999999999999976533111 00 011112222 222 24566655 79999999877653 0
Q ss_pred ---------------------------------------CCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccc
Q 006709 511 ---------------------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (634)
Q Consensus 511 ---------------------------------------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~ 551 (634)
....+|..++|+|+|||||+|++|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~---------------- 152 (222)
T 4fd5_A 89 DIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSVDSRFRGKGLAKKLI---------------- 152 (222)
T ss_dssp CTTHHHHHHHHCCCHHHHHHHHHHHHHHTTCCHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHH----------------
T ss_pred cHHHHHHHHhhccChhHHHHHHHHHHHHhhcchhhhcCCCcEEEEEEEEECHHHcCCCHHHHHH----------------
Confidence 3457899999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeeccccc
Q 006709 552 STNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 552 ~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~ 598 (634)
+.+++.+++.|+..+.+.+ ..+.+||+++||+..+...
T Consensus 153 ---------~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~ 192 (222)
T 4fd5_A 153 ---------EKSEELALDRGFQVMKTDATGAFSQRVVSSLGFITKCEIN 192 (222)
T ss_dssp ---------HHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEE
T ss_pred ---------HHHHHHHHHCCCCEEEEEeCCHHHHHHHHHCCCEEEEEEc
Confidence 9999999999999887776 5789999999999987643
|
| >3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-12 Score=125.33 Aligned_cols=125 Identities=18% Similarity=0.190 Sum_probs=91.1
Q ss_pred cccccCccchHHHHHHhHHHHH-HcccC----ccCCHHHHH----hhc--CcEEEEE-ECCeEEEEEEEeeecC------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLV-ESGAL----VRRTDEELL----KAL--DSFYVVE-REGQIIACAALFPFFK------ 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~-~~~~~----~~~~~~~~~----~~l--~~~~V~~-~~g~iiG~~~l~~~~~------ 510 (634)
..||+++++|++++.+++.... ..... .....+++. ..+ ...+|+. .+|+|||++...+...
T Consensus 7 ~~iR~a~~~D~~~i~~~~~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~~~~~ 86 (215)
T 3te4_A 7 YTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPDDV 86 (215)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTCCSCHHHHHHHHTTGGGSCCEEEEETTSCEEEEEEEEEEECCCTTCC
T ss_pred EEEEECCHHHHHHHHHHHHHhcCCCCCchhhcCCCCchHHHHHHHHHHhCCcEEEEEcCCCcEEEEEecccccCcchhhH
Confidence 4699999999999999875432 11110 000111222 222 2445554 5799999987654321
Q ss_pred -----------------------------------CC-eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccC
Q 006709 511 -----------------------------------EK-CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (634)
Q Consensus 511 -----------------------------------~~-~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~ 554 (634)
.. ..+|..++|+|+|||||+|++|+
T Consensus 87 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~L~------------------- 147 (215)
T 3te4_A 87 PEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDTNYRGLGIAGRLT------------------- 147 (215)
T ss_dssp CCCGGGGCCCHHHHHHHHHHHHHHHHCCHHHHCTTCSEEEEEEEEEECGGGTTSSHHHHHH-------------------
T ss_pred HHHHHhhccCccHHHHHHHHHHHhhccCHHHhCCCCCeEEEEEEEEECHHHhCCCHHHHHH-------------------
Confidence 12 78999999999999999999999
Q ss_pred CCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeeccccc
Q 006709 555 GFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 555 ~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~ 598 (634)
+.+++.+++.|+..+.+.+ ..+..||+++||+.++...
T Consensus 148 ------~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~Gf~~~~~~~ 187 (215)
T 3te4_A 148 ------ERAYEYMRENGINVYHVLCSSHYSARVMEKLGFHEVFRMQ 187 (215)
T ss_dssp ------HHHHHHHHHHTCCEEEEEESSHHHHHHHHHTTCEEEEEEC
T ss_pred ------HHHHHHHHHcCCCEEEEEecCHHHHHHHHHCCCEEEEEEE
Confidence 9999999999999998877 4789999999999987643
|
| >3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=118.15 Aligned_cols=122 Identities=19% Similarity=0.201 Sum_probs=92.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc--------CcEEEEE-ECCeEEEEEEEeeecC-CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l--------~~~~V~~-~~g~iiG~~~l~~~~~-~~~~e 515 (634)
..||+++++|++.+.+++......... ...+.++..+.+ ..+|+++ .+|++||++.+.+... ...++
T Consensus 7 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 86 (170)
T 3tth_A 7 IRLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRCE 86 (170)
T ss_dssp CEEEECCGGGHHHHHHHHTC--CCEEETTEEECSHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEeeCCHHHHHHHHHHHcCHHHHHhhccCCcccHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEEecccccceEE
Confidence 469999999999999986532221111 112444443332 2567777 7899999999976543 35677
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+ .++|+|+|||||+|++|+ ..+++++.+ .|++.+.+.+ .++.+||+++|
T Consensus 87 i-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~G 140 (170)
T 3tth_A 87 F-AIIISPGEEGKGYATEAT-------------------------DLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSG 140 (170)
T ss_dssp E-EEEECTTSCSSCSHHHHH-------------------------HHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTTT
T ss_pred E-EEEECccccCCCHHHHHH-------------------------HHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHCC
Confidence 7 789999999999999999 888899865 5999999988 46999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 141 F~~~g~ 146 (170)
T 3tth_A 141 FAEEGK 146 (170)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 999875
|
| >3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.38 E-value=3e-12 Score=117.69 Aligned_cols=121 Identities=13% Similarity=0.078 Sum_probs=91.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-----C-cEEEEE---ECCeEEEEEEEeeecCCCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-----D-SFYVVE---REGQIIACAALFPFFKEKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-----~-~~~V~~---~~g~iiG~~~l~~~~~~~~~e 515 (634)
..||+++++|++.+.+++.......+. .....+.+.+.+ . .++++. .+|++||++.+.+..... ++
T Consensus 14 i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~-~~ 92 (164)
T 3eo4_A 14 IIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQLNTDN-PE 92 (164)
T ss_dssp EEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECTTSSS-CE
T ss_pred EEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEecCCCc-EE
Confidence 469999999999999997432211111 111233443331 2 344444 579999999998665444 77
Q ss_pred EEEEEECC-CCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSP-ECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p-~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+ .++|+| +|||||+|++|+ ..+++++++.|++.|.+.+ .++.+||+++|
T Consensus 93 i-~~~v~~~~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~G 146 (164)
T 3eo4_A 93 I-GILIGEFFLWGKHIGRHSV-------------------------SLVLKWLKNIGYKKAHARILENNIRSIKLFESLG 146 (164)
T ss_dssp E-EEEECSTTSTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred E-EEEEcCHHHcCccHHHHHH-------------------------HHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCC
Confidence 7 899999 999999999999 8888999999999999988 46999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+.++.
T Consensus 147 F~~~g~ 152 (164)
T 3eo4_A 147 FKKTKK 152 (164)
T ss_dssp CEEEEE
T ss_pred CEEEee
Confidence 999875
|
| >1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A | Back alignment and structure |
|---|
Probab=99.38 E-value=7e-12 Score=115.72 Aligned_cols=122 Identities=9% Similarity=0.072 Sum_probs=90.9
Q ss_pred cccccCccchHHHHHHhHHHHHHc-----ccC-ccCCH----HHHHhh-------cCcEEEEEECCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES-----GAL-VRRTD----EELLKA-------LDSFYVVEREGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~-----~~~-~~~~~----~~~~~~-------l~~~~V~~~~g~iiG~~~l~~~~~- 510 (634)
..||+++++|++.+.+++...... .+. .+.+. +.+... -..+++++.+|++||++.+.+...
T Consensus 14 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~ 93 (182)
T 1s7k_A 14 LELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEPI 93 (182)
T ss_dssp EEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEEETT
T ss_pred EEEEECCHHHHHHHHHHHHhCHHHhhccCCCccccCCHHHHHHHHHHHHHHHhcCCceEEEEEECCEEEEEEEEEEccCC
Confidence 469999999999999997532111 000 00111 112221 136788889999999999986543
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHH
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADW 585 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~ 585 (634)
...+++ .++|+|+|||+|+|++|+ ..+++.+++ .|++.+.+.+ .++.+|
T Consensus 94 ~~~~~i-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~ 147 (182)
T 1s7k_A 94 NKAAYI-GYWLDESFQGQGIMSQSL-------------------------QALMTHYARRGDIRRFVIKCRVDNQASNAV 147 (182)
T ss_dssp TTEEEE-EEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHCSCCEEEEEEETTCHHHHHH
T ss_pred CceEEE-EEEECHhhcCCCHHHHHH-------------------------HHHHHHHHhhCCccEEEEEecCCCHHHHHH
Confidence 356778 589999999999999999 888899986 8999999988 468999
Q ss_pred HHhCCCeeccc
Q 006709 586 FKSRGFRECSI 596 (634)
Q Consensus 586 Y~k~GF~~~~~ 596 (634)
|+++||+..+.
T Consensus 148 y~k~Gf~~~~~ 158 (182)
T 1s7k_A 148 ARRNHFTLEGC 158 (182)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCEEEee
Confidence 99999999775
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-11 Score=115.95 Aligned_cols=147 Identities=12% Similarity=0.206 Sum_probs=97.1
Q ss_pred ccccCccchHHHHHHhHH---HHHHcccCccCCHHHHHhhc---C--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL---D--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~---~~~~~~~~~~~~~~~~~~~l---~--~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V 521 (634)
+||.++.+|.++...... .+....+ ...+.+.+...+ . .+++++.+|++||++.+.+.......++..++|
T Consensus 3 ~~r~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~l~V 81 (164)
T 1ygh_A 3 EFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAI 81 (164)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEE
T ss_pred eEEEecCCCchhhHHHHHHHHHHHHhhc-ccCCHHHHHHHhhCCCceEEEEECCCCEEEEEEEEEEcCCCCceEEEEEEE
Confidence 356665555554444332 2222222 223444444433 1 246777789999999998775556788989999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec-HHhHHHHHhCCCeecccccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~ 599 (634)
+|+|||||+|++|+ +.+++.+++ .|+..+.+.. ..+.+||+++||+..+. .
T Consensus 82 ~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~GF~~~~~--~ 134 (164)
T 1ygh_A 82 SSTEQVRGYGAHLM-------------------------NHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEIT--L 134 (164)
T ss_dssp CTTCCCTTHHHHHH-------------------------HHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCC--S
T ss_pred CHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCceEEEEecCChHHHHHHHcCCEecce--e
Confidence 99999999999999 899999988 8998554443 46899999999998764 4
Q ss_pred hhHhhhhccCC-CCceEEEeecCCCC
Q 006709 600 PEERRKRINLS-RNSKYYMKKLLPDT 624 (634)
Q Consensus 600 ~~~~~~~~~~~-~~s~~~~k~l~~~~ 624 (634)
+...+..+... ....++.+.|.|..
T Consensus 135 ~~~~~~~~~~~~~~~~~m~~~l~~~~ 160 (164)
T 1ygh_A 135 DKSIWMGYIKDYEGGTLMQCSMLPRI 160 (164)
T ss_dssp CHHHHBTTBCCTTCCEEEEEECCCCC
T ss_pred ccceEEEEEEEecCeEEEEeeccccC
Confidence 44444333222 23444448886543
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=5.8e-13 Score=126.39 Aligned_cols=121 Identities=18% Similarity=0.253 Sum_probs=93.5
Q ss_pred cccccCccchHHH-HHHhHHHHHHcccCccCCHHHHHhhc-------C--cEEEEE-ECCeEEEEEEEeeec-----CCC
Q 006709 449 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------D--SFYVVE-REGQIIACAALFPFF-----KEK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~-i~~l~~~~~~~~~~~~~~~~~~~~~l-------~--~~~V~~-~~g~iiG~~~l~~~~-----~~~ 512 (634)
..||+++.+|++. +.+++..... ...++.+++.+.+ . .+++++ .+|++||++.+.+.. ...
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 124 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTT---VGDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGM 124 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSC---CCCCCHHHHHHHHHHHHTTTTTEEEEEEECTTSCEEEEEEEEEEECSHHHHCE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhc---ccCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCcEEEEEEEEeccccccCCCc
Confidence 3699999999999 9998653321 1234444444322 2 355666 379999999998632 345
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCC
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 591 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF 591 (634)
.++|..++|+|+|||||+|++|+ +++++++++.|+..+.+.+ ....+||+++||
T Consensus 125 ~~~i~~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF 179 (190)
T 2vez_A 125 VGHIEDIAVEKGQQGKKLGLRII-------------------------QALDYVAEKVGCYKTILDCSEANEGFYIKCGF 179 (190)
T ss_dssp EEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCSEEECCCCGGGHHHHHHTTC
T ss_pred eEEEEEEEEchhhcCCCHHHHHH-------------------------HHHHHHHHHcCCeEEEEEeccchHHHHHHCCC
Confidence 68999999999999999999999 8999999999999999887 456799999999
Q ss_pred eecccc
Q 006709 592 RECSIE 597 (634)
Q Consensus 592 ~~~~~~ 597 (634)
+..+..
T Consensus 180 ~~~~~~ 185 (190)
T 2vez_A 180 KRAGLE 185 (190)
T ss_dssp CCCCCC
T ss_pred eehHHh
Confidence 987764
|
| >3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9e-12 Score=116.83 Aligned_cols=122 Identities=6% Similarity=0.024 Sum_probs=94.3
Q ss_pred cccccCccchHHHHHHhHHHH---HHcccC--c-cCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPL---VESGAL--V-RRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~---~~~~~~--~-~~~~~~~~~~l-----------~~~~V~~~~g~iiG~~~l~~~~~- 510 (634)
..+|+++++|++.+.+++... ...... . ..+.++....+ ..+++++.++++||++.+.+...
T Consensus 22 l~lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~ 101 (188)
T 3r9f_A 22 ITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHA 101 (188)
T ss_dssp EEEECCCGGGHHHHHHHHHHHHHHHHTTCSGGGGCCSHHHHHHHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEETT
T ss_pred EEEEeCCHHHHHHHHHHHhcChHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhhccCeEEEEEEECCEEEEEEEEEEecCC
Confidence 469999999999999998742 221111 1 12444444433 23678888999999999986543
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHH
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADW 585 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~ 585 (634)
...++| .++|+|+|||+|+|++|+ ..+.+++.+. |++.+.+.+ .++++|
T Consensus 102 ~~~~~i-~~~v~~~~~g~Gig~~ll-------------------------~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~ 155 (188)
T 3r9f_A 102 NKTAYI-GYWLGANFQGKGIVTNAI-------------------------NKLIQEYGDSGVIKRFVIKCIVDNKKSNAT 155 (188)
T ss_dssp TTEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHTTTSCSEEEEEEETTCHHHHHH
T ss_pred CCEEEE-EEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHhcCeEEEEEEecCCCHHHHHH
Confidence 467888 579999999999999999 8888888665 999999988 469999
Q ss_pred HHhCCCeeccc
Q 006709 586 FKSRGFRECSI 596 (634)
Q Consensus 586 Y~k~GF~~~~~ 596 (634)
|+|+||+..+.
T Consensus 156 y~k~GF~~~g~ 166 (188)
T 3r9f_A 156 ALRCGFTLEGV 166 (188)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCeEEeE
Confidence 99999999875
|
| >3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.3e-12 Score=118.83 Aligned_cols=122 Identities=20% Similarity=0.241 Sum_probs=92.7
Q ss_pred cccccCccchHHHHHHhHHHHHHccc--C-ccCCHHHHHhhc--------CcEEEEE-ECCeEEEEEEEeeecC-CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA--L-VRRTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~--~-~~~~~~~~~~~l--------~~~~V~~-~~g~iiG~~~l~~~~~-~~~~e 515 (634)
..||+++++|++.+.+++........ . ...+.+++.+.+ ..++++. .+|++||++.+.+... ...++
T Consensus 8 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 87 (176)
T 3eg7_A 8 LTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSAE 87 (176)
T ss_dssp CEEEECCGGGHHHHHHHHTTTCSCEEETTEEECSHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEeeCCHHHHHHHHHHHcCHHHHhhhccccccCHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEEecCcccCceE
Confidence 46999999999999998643211111 1 111334333322 2477777 7899999999986543 35677
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+ .++|+|+|||+|+|++|+ +.+++++.+ .|++.+.+.+ ..+.+||+++|
T Consensus 88 ~-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~G 141 (176)
T 3eg7_A 88 F-QIIIAPEHQGKGFARTLI-------------------------NRALDYSFTILNLHKIYLHVAVENPKAVHLYEECG 141 (176)
T ss_dssp E-EEEECGGGTTSSCHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTT
T ss_pred E-EEEECHHHhCCCHHHHHH-------------------------HHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHCC
Confidence 7 699999999999999999 888899877 4999999988 47999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 142 F~~~~~ 147 (176)
T 3eg7_A 142 FVEEGH 147 (176)
T ss_dssp CEEEEE
T ss_pred CEEeee
Confidence 999876
|
| >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=121.10 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=94.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-c---cCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeecC-----CCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-V---RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-----EKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~---~~~~~~~~~~l------~~~~V~~~~g~iiG~~~l~~~~~-----~~~ 513 (634)
..||+++++|++.+..++.......+. . +.+.+.+...+ ..+|+++.+|++||++.+.+... ...
T Consensus 15 ~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 94 (182)
T 3f5b_A 15 FCFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYPDGA 94 (182)
T ss_dssp EEEEECCGGGHHHHHHHTTSHHHHTTSCHHHHHHHHHHHHHHHTTSCCSSEEEEEEETTEEEEEEEEEEECSCSSCTTCE
T ss_pred EEEEECCHHHHHHHHHHHcCchhhhhccCCCccccHHHHHHHHhcCCCCeEEEEEEeCCCcEEEEEEeccccccccCCCc
Confidence 469999999999998864322212221 1 11334444443 26888899999999999976532 345
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
.++..++|+|+|||+|+|++|+ +.+++++. .|+..+.+.+ .++.+||+|+
T Consensus 95 ~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~-~~~~~i~l~v~~~N~~a~~~y~k~ 148 (182)
T 3f5b_A 95 VTLDLFICRLDYIGKGLSVQMI-------------------------HEFILSQF-SDTKIVLINPEISNERAVHVYKKA 148 (182)
T ss_dssp EEEEEEECSGGGCCHHHHHHHH-------------------------HHHHHHHC-TTCSEEEECCBTTCHHHHHHHHHH
T ss_pred eEEEEEEEChhhcCCchHHHHH-------------------------HHHHHHhh-CCCCEEEEecCcCCHHHHHHHHHC
Confidence 8999999999999999999999 88888884 4999999988 4699999999
Q ss_pred CCeecccccc
Q 006709 590 GFRECSIEMI 599 (634)
Q Consensus 590 GF~~~~~~~~ 599 (634)
||+..+....
T Consensus 149 GF~~~~~~~~ 158 (182)
T 3f5b_A 149 GFEIIGEFIA 158 (182)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEeEEec
Confidence 9999887533
|
| >3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-12 Score=117.75 Aligned_cols=123 Identities=15% Similarity=0.123 Sum_probs=91.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-CccCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEeeecC----
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFFK---- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l-----------~~~~V~~~--~g~iiG~~~l~~~~~---- 510 (634)
..||+++++|++.+.++ . ...... ..+.+.++....+ ..+|++.. +|++||++.+.+...
T Consensus 16 l~ir~~~~~D~~~l~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~ 93 (175)
T 3juw_A 16 LVLEPQSMARFDQWFAM-E-RQRDEAGHRDLTEDQAWLRLCARQGMWDAYACGFYYLLDPVSGEMRGEAGFQFRRRGFGP 93 (175)
T ss_dssp CEEEECCGGGHHHHHHH-H-HHSCSTTTTTCCHHHHHHHHHHHHHHHHHHSCCEEEEECTTTCCEEEEEEEECCCCSSCT
T ss_pred eEecCCCHHHHHHHHHH-H-HHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEEECCCCcEEEEeeeEEeeccccC
Confidence 46999999999999999 2 222211 1234555543333 13455553 799999999986422
Q ss_pred --CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhH
Q 006709 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTA 583 (634)
Q Consensus 511 --~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~ 583 (634)
....++ .++|+|+|||||+|++|+ +.+++++.+. |++.|.+.+ .++.
T Consensus 94 ~~~~~~~~-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~l~v~~~N~~a~ 147 (175)
T 3juw_A 94 GFDNHPEA-AWAVASAHQGRGLAAEAM-------------------------QALLAHHDRSSGRQRVVALIARSNLPSL 147 (175)
T ss_dssp TTTTSCEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHHTSCCEEEEEETTCHHHH
T ss_pred CCCCCceE-EEEECHHHhCCCHHHHHH-------------------------HHHHHHHHhCCCCceEEEEECCCChhHH
Confidence 145677 689999999999999999 8888888774 999999888 4799
Q ss_pred HHHHhCCCeecccccc
Q 006709 584 DWFKSRGFRECSIEMI 599 (634)
Q Consensus 584 ~~Y~k~GF~~~~~~~~ 599 (634)
+||+++||+.++....
T Consensus 148 ~~y~k~GF~~~~~~~~ 163 (175)
T 3juw_A 148 RLAERLGFRGYSDVAF 163 (175)
T ss_dssp HHHHHTTCEEEEEEEE
T ss_pred HHHHHcCCeEecceee
Confidence 9999999999887443
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.5e-13 Score=125.30 Aligned_cols=120 Identities=15% Similarity=0.096 Sum_probs=92.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHh----hcCcEEEEEE-CCeEEEEEEEeeec-CCCeEEEEEEEEC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----ALDSFYVVER-EGQIIACAALFPFF-KEKCGEVAAIGVS 522 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~----~l~~~~V~~~-~g~iiG~~~l~~~~-~~~~~ei~~l~V~ 522 (634)
..||+++.+|++.+.+++....... ......... .-..++|++. +|++||++.+.+.. ....++|..++|+
T Consensus 27 ~~ir~~~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~i~~l~V~ 103 (189)
T 3d3s_A 27 YHLRPPRRNDGAAIHQLVSECPPLD---LNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVAVH 103 (189)
T ss_dssp CEEECCCGGGHHHHHHHHHTSTTSC---CCCHHHHHHHHHHCGGGCEEEECTTSCEEEEEEEEECSSCTTEEEEEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHccccC---chhhHHHHHhccCCCceEEEEECCCCEEEEEEEEEEcCCCCCceEEEEEEEC
Confidence 4699999999999999975421111 111111111 1235778888 99999999988653 3356899999999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||||+|++|+ +.+++++++.|+..|.+.+ ..+.+||+++||+..+.
T Consensus 104 p~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~~~ 156 (189)
T 3d3s_A 104 SRARGHRLGRAML-------------------------GHILERQECRHVRHLETTVGPDNQASRRTFAGLAGERGAH 156 (189)
T ss_dssp GGGTTSCHHHHHH-------------------------HHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTTCE
T ss_pred HHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccc
Confidence 9999999999999 8999999999999999888 36999999999987554
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=123.52 Aligned_cols=125 Identities=13% Similarity=0.142 Sum_probs=87.6
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-CccC-C------HHHHH----hhc--CcEEE-EEECCeEEEEEEEeee-----
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-LVRR-T------DEELL----KAL--DSFYV-VEREGQIIACAALFPF----- 508 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-~~~~-~------~~~~~----~~l--~~~~V-~~~~g~iiG~~~l~~~----- 508 (634)
..||+++++|++.+.+++........ ...+ . .+... ..+ ...++ ++.+|++||++...+.
T Consensus 2 ~~ir~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ivG~~~~~~~~~~~~ 81 (197)
T 3qb8_A 2 YTLIKLTSEYTSRAISFTSRNFVASEPTSIALKLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYEN 81 (197)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEECTTCCEEEEEEEEEHHHHHT
T ss_pred cEEEECCHHHHHHHHHHHHHhccccCcHHHHhCCCcchHHHHHHHHHHHHHhcCceEEEEcCCCCEEEEEEecCCcccch
Confidence 36899999999999998743321111 1000 0 11111 111 24455 4678999999654432
Q ss_pred ----------------cCCCe--EEEE---EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH
Q 006709 509 ----------------FKEKC--GEVA---AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567 (634)
Q Consensus 509 ----------------~~~~~--~ei~---~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a 567 (634)
..... .+|. .++|+|+|||||+|++|+ +++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~a 136 (197)
T 3qb8_A 82 MHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLL-------------------------KKTIEES 136 (197)
T ss_dssp CCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHH-------------------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHH-------------------------HHHHHHH
Confidence 00011 4555 899999999999999999 9999999
Q ss_pred HHcCCcEEEEec--HHhHHHHHhCCCeeccccc
Q 006709 568 ASLGLDMLFLLT--TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 568 ~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~ 598 (634)
++.|+..+.+.+ ..+.+||+++||+..+...
T Consensus 137 ~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~ 169 (197)
T 3qb8_A 137 SSHGFKYIYGDCTNIISQNMFEKHGFETVGSVK 169 (197)
T ss_dssp HHTTCCEEEEEECSHHHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCEEEEEcCCHHHHHHHHHCCCeEEEEEE
Confidence 999999999987 5789999999999987643
|
| >2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.8e-12 Score=117.05 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=90.4
Q ss_pred cccccCccchHHHHHHhHHHHHHccc-----CccCC-----HHH-HHh-------hcCcEEEEEE-CCeEEEEEEEeeec
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA-----LVRRT-----DEE-LLK-------ALDSFYVVER-EGQIIACAALFPFF 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~-----~~~~~-----~~~-~~~-------~l~~~~V~~~-~g~iiG~~~l~~~~ 509 (634)
..||+++++|++.+.+++........ ..+.. ... +.. .-..++|++. +|++||++.+.+..
T Consensus 4 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~ 83 (204)
T 2qec_A 4 PTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDRPD 83 (204)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCHHHHTTSCSCCGGGHHHHHHHHHHHHHTHHHHEEEEEEECTTSCEEEEEEEECCC
T ss_pred cEEecCCHHHHHHHHHHHHHHhhcChhhEEEeCCCchhHHHHHHHHHHHHhhhcccCceEEEEECCCCCEEEEEEEeCCC
Confidence 46899999999999999865442211 11111 111 111 1135788888 99999999987532
Q ss_pred --------------------------------------CCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccc
Q 006709 510 --------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (634)
Q Consensus 510 --------------------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~ 551 (634)
.....+|..++|+|+|||||+|++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll---------------- 147 (204)
T 2qec_A 84 GNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALL---------------- 147 (204)
T ss_dssp ------------CCHHHHHC-CCC---------CTTSCSSCCEEEEEEEECGGGTTSSHHHHHH----------------
T ss_pred CCcchhHHHhhhhHHHHHhCccHHHHHHHHHHHHhhCCCCCeEEEEEEEEChhhcCCCHHHHHH----------------
Confidence 23457899999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccccch
Q 006709 552 STNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 552 ~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~~~ 600 (634)
+.+++.+++. .+++.+ ..+.+||+++||+..+...++
T Consensus 148 ---------~~~~~~a~~~---~~~v~~~n~~a~~~y~k~GF~~~~~~~~~ 186 (204)
T 2qec_A 148 ---------NHGIARAGDE---AIYLEATSTRAAQLYNRLGFVPLGYIPSD 186 (204)
T ss_dssp ---------HHHHHHHTTS---CEEEEESSHHHHHHHHHTTCEEEEEECCS
T ss_pred ---------HHHHHHhhhC---CeEEEecCccchHHHHhcCCeEeEEEEcC
Confidence 8888888776 455555 579999999999998875543
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.36 E-value=4e-12 Score=130.83 Aligned_cols=119 Identities=17% Similarity=0.263 Sum_probs=93.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeee--cCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPF--FKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~--~~~~~~ei~~l~V~p~ 524 (634)
..||+++++|++.+.+++...... ...|....+...+ ..+||++.+|++||++.+.++ ......++ .++|+|+
T Consensus 141 i~IR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~g~iVG~~~~~~~~~~~~~~~~~-~l~V~p~ 217 (276)
T 3iwg_A 141 IDMQIAGTEQLTAFVTFAAANIGA--PEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQYQTEYADL-GMIVAQS 217 (276)
T ss_dssp CCCEECCGGGHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSCTTEEEE-EEEECGG
T ss_pred eEEEECCHHHHHHHHHHHHHhhcC--cHHHHHHHHHhhccCCeEEEEEECCEEEEEEEEEeccccCCcceEE-EEEECHH
Confidence 579999999999999998765544 2112222222222 468899999999999997752 22344555 6999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|+ +.+++.+++.|++.+. .+ ..+.+||+|+||+.++.
T Consensus 218 ~RGkGiG~~Ll-------------------------~~l~~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~~~~ 267 (276)
T 3iwg_A 218 NRGQGIAKKVL-------------------------TFLTKHAATQGLTSIC-STESNNVAAQKAIAHAGFTSAHR 267 (276)
T ss_dssp GTTSSHHHHHH-------------------------HHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEEEEE
T ss_pred HcCCCHHHHHH-------------------------HHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEEeeE
Confidence 99999999999 9999999999999998 66 46999999999998764
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.35 E-value=6.4e-12 Score=128.43 Aligned_cols=119 Identities=14% Similarity=0.116 Sum_probs=95.3
Q ss_pred ccccccccCccchHHHHHHhHHHHHHcccCccCCHHH-------HHh-hcCcEEEEEECCeEEEEEEEeeecCCCeEEEE
Q 006709 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------LLK-ALDSFYVVEREGQIIACAALFPFFKEKCGEVA 517 (634)
Q Consensus 446 D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~-------~~~-~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~ 517 (634)
+.-..||+++++|++.+.+|+.. ...+ +...+. +.. .-..++|++.+|++||++.+.++. ..++|.
T Consensus 17 ~~~~~iR~~~~~D~~~i~~l~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~--~~~~i~ 90 (288)
T 3ddd_A 17 FQGMIIRYATPDDIEDMVSIFID--AYNF--PGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFFYN--KQAWIG 90 (288)
T ss_dssp STTCEEEECCGGGHHHHHHHHHH--HHTC--CSCHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEEEEEECS--SEEEEE
T ss_pred CCCcEEEECCHHHHHHHHHHHHh--ccCC--CCchhhhHHHHHHHHhCCCCEEEEEEECCEEEEEEEEEEEC--CEEEEE
Confidence 34468999999999999999763 1233 222221 111 124688999999999999998654 789999
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
.++|+|+|||||+|++|+ +++++.++ .|+..+.+.+ ..+.+||+++||+..+.
T Consensus 91 ~~~V~p~~rg~Gig~~Ll-------------------------~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~ 144 (288)
T 3ddd_A 91 LMGVKKAYQRRGIGTEVF-------------------------RRLLEIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYR 144 (288)
T ss_dssp EEEECGGGCSSSHHHHHH-------------------------HHHHHHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEE
T ss_pred EEEECHHHcCCCHHHHHH-------------------------HHHHHHHH-cCCcEEEEEeCHHHHHHHHHCCCEEece
Confidence 999999999999999999 88888888 8889988877 56899999999998765
|
| >2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.6e-12 Score=119.54 Aligned_cols=122 Identities=11% Similarity=0.020 Sum_probs=92.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc-----------CcEEEEE--ECCeEEEEEEEeeecCCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l-----------~~~~V~~--~~g~iiG~~~l~~~~~~~~~ 514 (634)
..||+++++|++.+.+++..... .+. .+.+.++..+.+ ..++++. .+|++||++.+.+......+
T Consensus 35 l~iR~~~~~D~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~iG~~~~~~~~~~~~~ 113 (195)
T 2fsr_A 35 LTLRPLAMADFPAYRDFMASPRS-TGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEK 113 (195)
T ss_dssp EEEECCCGGGHHHHHHHHHSGGG-GGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSC
T ss_pred EEEEcCCHHHHHHHHHHHcCCCc-eecCCCCCHHHHHHHHHHHHhccccCCceEEEEEECCCCCEEEEEeeEecCCCCeE
Confidence 46999999999999999764322 121 123333322221 1245555 37999999999865445678
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++ .++|+|+|||||+|++|+ ..+++++++ .|++.|.+.+ .++.+||+|+
T Consensus 114 ~i-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~ 167 (195)
T 2fsr_A 114 EL-GWLLYEGHEGRGYAAEAA-------------------------VALRDWAFETLNLPTLVSYVSPQNRKSAAVAERI 167 (195)
T ss_dssp EE-EEEECTTCTTSSHHHHHH-------------------------HHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHT
T ss_pred EE-EEEEChhHcCCChHHHHH-------------------------HHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHC
Confidence 88 889999999999999999 888898877 7999999988 4699999999
Q ss_pred CCeecccc
Q 006709 590 GFRECSIE 597 (634)
Q Consensus 590 GF~~~~~~ 597 (634)
||+..+..
T Consensus 168 GF~~~g~~ 175 (195)
T 2fsr_A 168 GGTLDPLA 175 (195)
T ss_dssp TCEECTTS
T ss_pred CCEEEeee
Confidence 99998764
|
| >2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=117.87 Aligned_cols=111 Identities=12% Similarity=0.158 Sum_probs=82.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 528 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgq 528 (634)
..+|+++.+|++++.+++... ....+ ....-..++|++.++++||++.+.+. ...++|..|+|+|+||||
T Consensus 6 ~~i~~~~~~d~~~l~~l~~~~----~~~~~----~~~~~~~~~va~~~~~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~ 75 (128)
T 2k5t_A 6 IRLEKFSDQDRIDLQKIWPEY----SPSSL----QVDDNHRIYAARFNERLLAAVRVTLS--GTEGALDSLRVREVTRRR 75 (128)
T ss_dssp EECSSCCHHHHHHHHHHCTTS----CCCCC----CCCSSEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECTTCSSS
T ss_pred EEehhCCHHHHHHHHHHcccC----CHHHh----EECCCccEEEEEECCeEEEEEEEEEc--CCcEEEEEEEECHHHcCC
Confidence 458889999999988874211 11111 01111257888899999999998854 345899999999999999
Q ss_pred CHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhCCCeeccc
Q 006709 529 GQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSI 596 (634)
Q Consensus 529 GiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~GF~~~~~ 596 (634)
|+|++|| +++++.++. +..+.+.+ ..+.+||+++||++.+.
T Consensus 76 GiG~~Ll-------------------------~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~~~~~ 122 (128)
T 2k5t_A 76 GVGQYLL-------------------------EEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQALGFTTQQG 122 (128)
T ss_dssp SHHHHHH-------------------------HHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCEECSS
T ss_pred CHHHHHH-------------------------HHHHHHhhh--CCEEEEeccCccccHHHHHHHHHcCCCcccc
Confidence 9999999 888887743 55566633 25789999999998765
|
| >1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=8.9e-12 Score=115.49 Aligned_cols=123 Identities=13% Similarity=0.096 Sum_probs=93.6
Q ss_pred cccccCccchHHHHHHhHHHHHHc--ccC----ccCCHHHHHh-hc-----------CcEEEEEECCeEEEEEEEeeecC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES--GAL----VRRTDEELLK-AL-----------DSFYVVEREGQIIACAALFPFFK 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~--~~~----~~~~~~~~~~-~l-----------~~~~V~~~~g~iiG~~~l~~~~~ 510 (634)
..+|+++++|++.+.+++...... .+. .+.+.++..+ .+ ..++++..+|++||++.+.+...
T Consensus 11 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ 90 (184)
T 1nsl_A 11 ITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQ 90 (184)
T ss_dssp EEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHcCHHHHhhcccccCCCCCHHHHHHHHHHHHHHhhhccCceEEEEEECCEEEEEEEEEeccc
Confidence 469999999999999997642111 111 1124444333 22 35788889999999999986543
Q ss_pred -CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHH
Q 006709 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 -~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~ 584 (634)
...+++ .++|+|+|||||+|++|+ ..+++++ ++.|++.+.+.+ ..+.+
T Consensus 91 ~~~~~~i-~~~v~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~~~~~N~~a~~ 144 (184)
T 1nsl_A 91 VNRKAEI-GYWIAKEFEGKGIITAAC-------------------------RKLITYAFEELELNRVAICAAVGNEKSRA 144 (184)
T ss_dssp TTTEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHH
T ss_pred ccCeEEE-EEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHhcCcEEEEEEEecCCHHHHH
Confidence 356778 579999999999999999 8888988 568999999988 46899
Q ss_pred HHHhCCCeecccc
Q 006709 585 WFKSRGFRECSIE 597 (634)
Q Consensus 585 ~Y~k~GF~~~~~~ 597 (634)
||+++||+..+..
T Consensus 145 ~y~k~Gf~~~~~~ 157 (184)
T 1nsl_A 145 VPERIGFLEEGKA 157 (184)
T ss_dssp HHHHHTCEEEEEE
T ss_pred HHHHcCCEEEEEe
Confidence 9999999998753
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-12 Score=116.47 Aligned_cols=118 Identities=25% Similarity=0.334 Sum_probs=90.5
Q ss_pred cccccCccchH-----HHHHHhHHHHHHcccCccCCHHHHHhhcC--cEEEEEECCeEEEEEEEeeec---CC---CeEE
Q 006709 449 EGTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVEREGQIIACAALFPFF---KE---KCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~-----~~i~~l~~~~~~~~~~~~~~~~~~~~~l~--~~~V~~~~g~iiG~~~l~~~~---~~---~~~e 515 (634)
..||+++.+|+ +.+.+++..... ...+.+.+...+. .+++ +.+|++||++.+.+.. .. ..++
T Consensus 6 ~~ir~~~~~D~~~~~~~~i~~l~~~~~~----~~~~~~~~~~~~~~~~~~v-~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 80 (181)
T 1m4i_A 6 HTARLVHTADLDSETRQDIRQMVTGAFA----GDFTETDWEHTLGGMHALI-WHHGAIIAHAAVIQRRLIYRGNALRCGY 80 (181)
T ss_dssp TCCEEEEGGGCCHHHHHHHHHHHHHHTT----TCCCHHHHHHTCSSEEEEE-EETTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEECChHHcchhHHHHHHHHHHHHcc----cccCHHHHHhhcCCcEEEE-EECCEEEEEEEEEEeccccCCCCcceeE
Confidence 57999999999 999888764332 2234566666653 5677 8899999999997543 22 4578
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeec
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 594 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~ 594 (634)
|..++|+|+|||||+|++|+ +++++.+++ ++....+.. ..+.+||+++||+..
T Consensus 81 i~~l~V~p~~rg~Gig~~Ll-------------------------~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~GF~~~ 134 (181)
T 1m4i_A 81 VEGVAVRADWRGQRLVSALL-------------------------DAVEQVMRG-AYQLGALSSSARARRLYASRGWLPW 134 (181)
T ss_dssp EEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHH-HCSEEEEECCTTTHHHHHHTTCEEC
T ss_pred EEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHh-CcEEEEecCCHHHHHHHHhcCCEEc
Confidence 99999999999999999999 888888877 555433333 579999999999998
Q ss_pred ccc
Q 006709 595 SIE 597 (634)
Q Consensus 595 ~~~ 597 (634)
+..
T Consensus 135 ~~~ 137 (181)
T 1m4i_A 135 HGP 137 (181)
T ss_dssp CSC
T ss_pred CCc
Confidence 763
|
| >1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=117.15 Aligned_cols=123 Identities=12% Similarity=0.044 Sum_probs=91.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecC-CCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK-EKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~-~~~~ei~ 517 (634)
..+|+++++|++.+ +++......... .....+.+...+ ...|++..+|++||++.+.+... ...++|.
T Consensus 22 i~lr~~~~~D~~~l-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~~~~~~i~ 100 (197)
T 1yre_A 22 LRLEPLVEADIPEL-VSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIG 100 (197)
T ss_dssp EEEEECCGGGHHHH-HHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEEE
T ss_pred EEEecCChhhHHHH-HhhcChhhhhccCCCchhHHHHHHHHHHhhccCCeEEEEEEECCeEEEEEEEEeecCCcCeeEEE
Confidence 46999999999999 997432211111 111222222221 13566668999999999976543 3578997
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHHHHHhCCCe
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFR 592 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~~Y~k~GF~ 592 (634)
.++|+|+|||+|+|++|+ ..+++++.+ .|+..|.+.+ .++.+||+++||+
T Consensus 101 ~l~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~ 155 (197)
T 1yre_A 101 WTWLDQAQHGSGLNRMIK-------------------------YLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQ 155 (197)
T ss_dssp EEEECGGGTTTTHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCE
T ss_pred EEEECHhHhcCCHHHHHH-------------------------HHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCe
Confidence 779999999999999999 888899988 8999999988 4789999999999
Q ss_pred ecccc
Q 006709 593 ECSIE 597 (634)
Q Consensus 593 ~~~~~ 597 (634)
.++..
T Consensus 156 ~~g~~ 160 (197)
T 1yre_A 156 REGVL 160 (197)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 97753
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.6e-11 Score=113.80 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=83.6
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++|++.+|++||++.+.+. ....++|..++|+|+|||+|+|++|+ +.++++++
T Consensus 77 ~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~~~~rg~Gig~~ll-------------------------~~~~~~~~ 130 (187)
T 3pp9_A 77 IIYIALLHNQIIGFIVLKKN-WNNYAYIEDITVDKKYRTLGVGKRLI-------------------------AQAKQWAK 130 (187)
T ss_dssp EEEEEEETTEEEEEEEEEEC-TTSCEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEEECCeEEEEEEEEcC-CCCeEEEEEEEECHHHhcCCHHHHHH-------------------------HHHHHHHH
Confidence 48889999999999999853 45678999999999999999999999 99999999
Q ss_pred HcCCcEEEEec----HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeecC
Q 006709 569 SLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 621 (634)
Q Consensus 569 ~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~ 621 (634)
+.|++.+.+.+ ..+.+||+++||+.++....... ..........+||.+++
T Consensus 131 ~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~--~~~~~~~e~~~~~~~~l 185 (187)
T 3pp9_A 131 EGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDFLVYK--GLNMTSDEVAIYWYLHF 185 (187)
T ss_dssp HTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEESSGGG--GTCSSSCCCEEEEEEEC
T ss_pred HCCCCEEEEEEecCCHHHHHHHHHCCCEEeceEeeecc--CCcccCCcEEEEEEeec
Confidence 99999999988 46899999999999887544322 12222344556664443
|
| >2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A | Back alignment and structure |
|---|
Probab=99.31 E-value=9.4e-12 Score=115.99 Aligned_cols=110 Identities=16% Similarity=0.112 Sum_probs=92.4
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHH--hhcCcEEEEEECCeEEEEEEEeeecC--CCeEEEEEEEECCCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVEREGQIIACAALFPFFK--EKCGEVAAIGVSPEC 525 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~--~~l~~~~V~~~~g~iiG~~~l~~~~~--~~~~ei~~l~V~p~~ 525 (634)
.||+++++|++.+.+|+.. .. .+.+.+. ..-..+||++.+|+|+|++.+.|... .+.+.|..++ |
T Consensus 2 ~IR~a~~~D~~~l~~L~~~---~~----~~~~~L~~~~~~~~~fVAe~~g~ivG~v~l~~~i~gdg~~~~L~dl~----~ 70 (141)
T 2d4p_A 2 RFRPFTEEDLDRLNRLAGK---RP----VSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRIE----G 70 (141)
T ss_dssp EEECCCGGGHHHHHHTSTT---SC----CCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEEE----E
T ss_pred eEEECCHHHHHHHHHHHcc---Cc----chHHHHHhcCCCCeEEEEEECCEEEEEEeeeeEEEcCCeEEEEeHHh----h
Confidence 5899999999999999642 11 3555555 55678999999999999999876552 2347888888 9
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
||+|||+.|| ++++++|++.|+.++.|.+ ..++.||+++||+...
T Consensus 71 R~~GIG~~Ll-------------------------~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~~~ 119 (141)
T 2d4p_A 71 RSVEALRGLL-------------------------RAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALGP 119 (141)
T ss_dssp SSHHHHHHHH-------------------------HHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCCS
T ss_pred ccccHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecccCHHHHHHHHHCCCEecC
Confidence 9999999999 9999999999999999988 4699999999998865
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=115.74 Aligned_cols=124 Identities=24% Similarity=0.342 Sum_probs=93.0
Q ss_pred cccccc---CccchHHHHHHhHHHHHHccc----C----ccCCHHHHH------------hhcCcEEEEEECCeEEEEEE
Q 006709 448 YEGTRT---AKVTDLSGIKQIIQPLVESGA----L----VRRTDEELL------------KALDSFYVVEREGQIIACAA 504 (634)
Q Consensus 448 Ye~iR~---a~~~D~~~i~~l~~~~~~~~~----~----~~~~~~~~~------------~~l~~~~V~~~~g~iiG~~~ 504 (634)
...||+ ++++|++.+.+++........ . .....+.+. ..-..++|++.+|++||++.
T Consensus 4 i~~ir~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~ 83 (190)
T 2gan_A 4 VKKIKNPSTVKDELLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLKFRLSQEFDELYTYQKDNRIIGTIA 83 (190)
T ss_dssp EEECSSGGGGHHHHHHHHHHHHHHTTTCSSCCTTCSSCCCTTCHHHHHHHHHHHHHHHHHTTCSEEEEEEESSCEEEEEE
T ss_pred eeeecCccccchhHhhhHheehhhhcccChHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEE
Confidence 346888 899999999888654322211 0 111222221 11246888899999999999
Q ss_pred Eee-ecC-------------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc
Q 006709 505 LFP-FFK-------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570 (634)
Q Consensus 505 l~~-~~~-------------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~ 570 (634)
+.+ ... ...++|..++|+|+|||+|+|++|+ +.+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll-------------------------~~~~~~~~~~ 138 (190)
T 2gan_A 84 LVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLL-------------------------EFAVKRLRSL 138 (190)
T ss_dssp EECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHT
T ss_pred EEecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHC
Confidence 986 332 2478999999999999999999999 8888999999
Q ss_pred CCcEEEEec--HHhHHH-HHhCCCeeccc
Q 006709 571 GLDMLFLLT--TRTADW-FKSRGFRECSI 596 (634)
Q Consensus 571 g~~~l~l~t--~~a~~~-Y~k~GF~~~~~ 596 (634)
|++.+.+.. ..+.+| |+++||+..+.
T Consensus 139 g~~~i~l~~~n~~a~~~~y~k~GF~~~~~ 167 (190)
T 2gan_A 139 GKDPYVVTFPNLEAYSYYYMKKGFREIMR 167 (190)
T ss_dssp TCEEEEEECGGGSHHHHHHHTTTEEEEEC
T ss_pred CCCEEEEecCCccccccEEecCCCEEeec
Confidence 999999863 468999 99999998764
|
| >3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.3e-11 Score=117.49 Aligned_cols=123 Identities=14% Similarity=0.100 Sum_probs=94.8
Q ss_pred cccccCccc-hHHHHHHhHHHHHH-cccC---ccCCHHHHHhhc--------CcEEEEEE--CCeEEEEEEEeeecC-CC
Q 006709 449 EGTRTAKVT-DLSGIKQIIQPLVE-SGAL---VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFFK-EK 512 (634)
Q Consensus 449 e~iR~a~~~-D~~~i~~l~~~~~~-~~~~---~~~~~~~~~~~l--------~~~~V~~~--~g~iiG~~~l~~~~~-~~ 512 (634)
..+|+++++ |++.+.+++....+ ..+. ...+.+++...+ ..+|++.. +|++||++.+..... ..
T Consensus 39 l~lr~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~~~~ 118 (209)
T 3pzj_A 39 VSLQPLDAPRHGAALFRLFAGDDSHWEHLPYGPFEDEDAFITWLALTVAQSDTALYVVCAKDSDQALGFLGYRQMVQAHG 118 (209)
T ss_dssp EEEEECCHHHHHHHHHHHHHTCGGGGTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEEEEETTCCCCCEEEEEEEEEGGGT
T ss_pred EEEEECCcccCHHHHHHHHcCCHHHHhhCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEECCCCcEEEEEEeeeecCcCC
Confidence 469999999 99999998763211 1111 122445554443 13556654 899999999975533 46
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.++|..++|+|+|||||+|++|+ ..+.+++.+.|++.|.+.+ .++++||+|
T Consensus 119 ~~ei~~~~v~~~~~g~Gig~~ll-------------------------~~l~~~a~~~g~~~i~l~v~~~N~~a~~~y~k 173 (209)
T 3pzj_A 119 AIEIGHVNFSPALRRTRLATEAV-------------------------FLLLKTAFELGYRRCEWRCDSRNAASAAAARR 173 (209)
T ss_dssp EEEEEEEEECTTTTTSHHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHH
T ss_pred eEEEEEEEECHHHhcCCHHHHHH-------------------------HHHHHHHHHcCCcEEEEeecCCCHHHHHHHHH
Confidence 79998888999999999999999 8888999889999999988 469999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||+.++.
T Consensus 174 ~GF~~~g~ 181 (209)
T 3pzj_A 174 FGFQFEGT 181 (209)
T ss_dssp HTCEEEEE
T ss_pred CCCEEeee
Confidence 99999876
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=110.62 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=91.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcc--cCccCCHHHHHhhc------CcEEEEEEC-CeEEEEEEEeeecCCCeEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFKEKCGEVAAI 519 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~~~l------~~~~V~~~~-g~iiG~~~l~~~~~~~~~ei~~l 519 (634)
..||+++++|++.+.+++....... +..+.+.+.+.+.+ ..+++++.+ |++||++.+.+ .+|..+
T Consensus 3 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~------~~i~~~ 76 (147)
T 2kcw_A 3 ISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSG------QHMDAL 76 (147)
T ss_dssp EEEEECCSTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTTTTSCCEEEEETTSCEEEEEEEET------TEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHhhCCCCcEEEEEcCCCCEEEEEEEec------ceeccE
Confidence 4689999999999999987644332 22111222222222 257888888 99999999873 468899
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccc
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~ 597 (634)
+|+|+|||+|+|++|+ +.+++.++ ...+.+.. ..+.+||+++||+..+..
T Consensus 77 ~v~p~~rg~Gig~~ll-------------------------~~~~~~~~---~~~~~v~~~N~~a~~~y~k~Gf~~~~~~ 128 (147)
T 2kcw_A 77 FIDPDVRGCGVGRVLV-------------------------EHALSMAP---ELTTNVNEQNEQAVGFYKKVGFKVTGRS 128 (147)
T ss_dssp EECHHHHTTTHHHHHH-------------------------HHHHHHCT---TCEEEEETTCHHHHHHHHHHTEEEEEEC
T ss_pred EECHHHhCCCHHHHHH-------------------------HHHHHhcc---ceEEEEecCChHHHHHHHHCCCEEecee
Confidence 9999999999999999 77777773 23333333 578999999999998865
Q ss_pred cchhHhhhhccCCCCceEEEeec
Q 006709 598 MIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 598 ~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
..+ .+...-..+.|.++
T Consensus 129 ~~~------~~g~~~~~~~~~~~ 145 (147)
T 2kcw_A 129 EVD------DLGKPYPLLNLAYV 145 (147)
T ss_dssp SSS------SSSCSCCEEEEEEC
T ss_pred eee------eCCcccceEEEecc
Confidence 432 12233455666544
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.5e-12 Score=114.98 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=85.6
Q ss_pred ccccCc-cchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEEE-CCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 450 GTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 450 ~iR~a~-~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~~-~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
.+|... +.|.+++.+++ ..+..+.+.+.+.+.+ ..++++.. +|++||++.+.+ .....++|..|+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p~ 84 (145)
T 3s6f_A 11 QFQTTLEGVTPAQLGGFF-----EGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALS-DGILAASIPLLEVQAG 84 (145)
T ss_dssp EEESSCTTCCGGGSCSCC-----TTCSSCCCHHHHHHHHHHSSEEEEEECTTCCEEEEEEEEE-CSSSEEECCCEEECTT
T ss_pred EEeeccccCCHHHHHHHH-----hcCCCCCCHHHHHHHhccCceEEEEECCCCCEEEEEEEEe-cCCcEEEEEEEEECHH
Confidence 355543 66777777764 3333334556665554 35566666 799999998884 3456789999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~ 598 (634)
|||||+|++|+ +.+++.++ +...+.+.+ +.+.+||+++||+..+...
T Consensus 85 ~rg~GiG~~Ll-------------------------~~~~~~~~--~~~~~~l~~~~~a~~fY~k~GF~~~~~~~ 132 (145)
T 3s6f_A 85 WRSLGLGSELM-------------------------RRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMF 132 (145)
T ss_dssp SCSSSHHHHHH-------------------------HHHHHHHC--SCSEEECCCCGGGHHHHHHTTCCCCCCCC
T ss_pred HhcCcHHHHHH-------------------------HHHHHHhc--CCCeEEEEECHHHHHHHHHCCCEECCcEE
Confidence 99999999999 88888875 566666666 6799999999999976543
|
| >2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.2e-11 Score=112.47 Aligned_cols=122 Identities=12% Similarity=0.054 Sum_probs=90.8
Q ss_pred cccccCccchHHHHHHh-HHHHHHccc----CccCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEeeecC
Q 006709 449 EGTRTAKVTDLSGIKQI-IQPLVESGA----LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFFK 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l-~~~~~~~~~----~~~~~~~~~~~~l-----------~~~~V~~~--~g~iiG~~~l~~~~~ 510 (634)
..+|+++++|++.+.++ +.......+ ....+.+++...+ ...+++.. +|++||++.+.+...
T Consensus 15 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~~~ 94 (181)
T 2fck_A 15 LQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYH 94 (181)
T ss_dssp EEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEG
T ss_pred EEEEECchhhHHHHHHHHhCCHhHhcccCcCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEEEECCCCcEEEEEEEEEecc
Confidence 46999999999999998 432111111 1123444433322 24566665 899999999976432
Q ss_pred -CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHH
Q 006709 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 -~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~ 584 (634)
...+++ .++|+|+|||+|+|++|+ ..+++++++ .|++.+.+.+ .++.+
T Consensus 95 ~~~~~~i-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~~~~~N~~a~~ 148 (181)
T 2fck_A 95 TFNMASL-GYWIGDRYQRQGYGKEAL-------------------------TALILFCFERLELTRLEIVCDPENVPSQA 148 (181)
T ss_dssp GGTEEEE-EEEECHHHHTTTHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEECTTCHHHHH
T ss_pred cCCeEEE-EEEEChhhcCCChHHHHH-------------------------HHHHHHHHHhcCceEEEEEEccCCHHHHH
Confidence 456788 789999999999999999 899999988 5999999988 46899
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
||+++||+..+.
T Consensus 149 ~y~k~GF~~~~~ 160 (181)
T 2fck_A 149 LALRCGANREQL 160 (181)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCEEEEE
Confidence 999999999775
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=6.4e-11 Score=121.81 Aligned_cols=123 Identities=17% Similarity=0.142 Sum_probs=95.9
Q ss_pred cccccCccchHHHHHHhHH---HHHHcccC-ccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeecCCCeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQ---PLVESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~---~~~~~~~~-~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~~~~~~ei 516 (634)
..||+++++|++.+.+++. ........ .+.+.+++...+ ..++|++.+|++||++.+.+......++|
T Consensus 8 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i 87 (339)
T 2wpx_A 8 LEFVPLAANDDETVGQWLDLMALAAETGPRAAPPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARV 87 (339)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHSSSSCCCCCHHHHHHHHHCCCTTEEEEEEEEEETTEEEEEEEEEEETTCSEEEE
T ss_pred eEEEECCccCHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhccCCCcceeEEEEEECCEEEEEEEEEecCCCCeEEE
Confidence 4689999999666655543 32222211 112556555544 15788899999999999986644567999
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----H-------HhHHH
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----T-------RTADW 585 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~-------~a~~~ 585 (634)
..++|+|+|||+|+|++|+ +.+++++++.|+..+.+.+ . .+.+|
T Consensus 88 ~~~~v~p~~r~~Gig~~Ll-------------------------~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~ 142 (339)
T 2wpx_A 88 DQLLVHPGRRRRGIGRALW-------------------------AHARELARKHDRTTLTATVVESLPSGPAQDPGPAAF 142 (339)
T ss_dssp EEEEECTTSCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHH
T ss_pred EEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHH
Confidence 8899999999999999999 8999999999999999888 2 69999
Q ss_pred HHhCCCeeccc
Q 006709 586 FKSRGFRECSI 596 (634)
Q Consensus 586 Y~k~GF~~~~~ 596 (634)
|+++||+..+.
T Consensus 143 ~~~~Gf~~~~~ 153 (339)
T 2wpx_A 143 AAAMGAHRSDI 153 (339)
T ss_dssp HHHTTCEECSS
T ss_pred HHHCCCeeeee
Confidence 99999998765
|
| >2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=4.3e-11 Score=115.69 Aligned_cols=123 Identities=13% Similarity=0.048 Sum_probs=89.9
Q ss_pred cccccCccchHHHHHHhHHHHHH----cccCccC----C---H-HHHHhhc--------C---cEEEEEECCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE----SGALVRR----T---D-EELLKAL--------D---SFYVVEREGQIIACAAL 505 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~----~~~~~~~----~---~-~~~~~~l--------~---~~~V~~~~g~iiG~~~l 505 (634)
..+|+++++|++.+.+++..... ..+..++ + . +.+...+ . .+++++.+|++||++.+
T Consensus 17 l~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~ 96 (218)
T 2vzy_A 17 LQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQAL 96 (218)
T ss_dssp EEEECCCHHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHTCBTTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcccCccccccccCcCCcCchHHHHHHHHHHHHhhcccCcCCceEEEEEEECCEEEEEEEE
Confidence 46999999999999999752110 1110000 1 1 1111111 1 45777889999999999
Q ss_pred eeec--CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec---
Q 006709 506 FPFF--KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT--- 579 (634)
Q Consensus 506 ~~~~--~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t--- 579 (634)
.+.. ....+++ .++|+|+|||||+|++|+ ..+++++.+ .|++.|.+.+
T Consensus 97 ~~~~~~~~~~~ei-g~~v~~~~rgkGig~~ll-------------------------~~l~~~a~~~~g~~~i~~~v~~~ 150 (218)
T 2vzy_A 97 SSKDFPITRQVDS-GSWLGLRYQGHGYGTEMR-------------------------AAVLYFAFAELEAQVATSRSFVD 150 (218)
T ss_dssp EEESHHHHCEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETT
T ss_pred eccccCCCCeEEE-EEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhhCCceEEEEEeccC
Confidence 8654 2356888 689999999999999999 888899887 7999999988
Q ss_pred -HHhHHHHHhCCCeecccc
Q 006709 580 -TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 580 -~~a~~~Y~k~GF~~~~~~ 597 (634)
.++++||+|+||+.++..
T Consensus 151 N~~a~~~y~k~GF~~~g~~ 169 (218)
T 2vzy_A 151 NPASIAVSRRNGYRDNGLD 169 (218)
T ss_dssp CHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHCCCEEeeee
Confidence 469999999999998763
|
| >2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=113.66 Aligned_cols=121 Identities=8% Similarity=-0.017 Sum_probs=90.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC---ccCCH-HHHHhhc--------CcEEEEEECCeEEEEEEEeeecC-CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTD-EELLKAL--------DSFYVVEREGQIIACAALFPFFK-EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~-~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~~-~~~~e 515 (634)
..||+++++|++.+.++ .......+. .+.+. ++....+ ..+|+++.+|++||++.+.+... ...++
T Consensus 13 ~~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~~~~~~~~~~~ 91 (194)
T 2z10_A 13 VRLEPLALAHLPAFLRH-YDPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPEPEHAKLE 91 (194)
T ss_dssp EEEEECCGGGHHHHHHT-CCHHHHTTSTTCCSSSSHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEEGGGTEEE
T ss_pred EEEeeCCHHHHHHHHHh-cCHHHHHhcCCCCCCChHHHHHHHHHHhhcCCCceEEEEecCCCEEEEEEecccCcccCEEE
Confidence 46999999999999998 432221111 12232 3332222 24577788999999999975433 35788
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~G 590 (634)
|..+.+ |+|||+|+|++|+ ..+++++.+. |++.|.+.+ ..+++||+++|
T Consensus 92 i~~~~~-p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~G 145 (194)
T 2z10_A 92 LGTMLF-KPFWGSPANKEAK-------------------------YLLLRHAFEVLRAERVQFKVDLRNERSQRALEALG 145 (194)
T ss_dssp EEEEEC-GGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHT
T ss_pred EeeEEC-HhHhCCcHHHHHH-------------------------HHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcC
Confidence 866566 9999999999999 8888999875 999999988 46999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|+..+.
T Consensus 146 F~~~g~ 151 (194)
T 2z10_A 146 AVREGV 151 (194)
T ss_dssp CEEEEE
T ss_pred CcEEEe
Confidence 999775
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-10 Score=109.07 Aligned_cols=92 Identities=21% Similarity=0.269 Sum_probs=78.5
Q ss_pred CHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCC
Q 006709 479 TDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556 (634)
Q Consensus 479 ~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~ 556 (634)
+.+.+.+.+ ..+++++.++++||++.+.+. ....++|..++|+|+|||+|+|++|+
T Consensus 28 ~~~~~~~~l~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~Ll--------------------- 85 (163)
T 1yvk_A 28 SKDIVDEYLERGECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLV--------------------- 85 (163)
T ss_dssp CHHHHHHHHHHSEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHHHH---------------------
T ss_pred CHHHHHHHhcCCeEEEEEECCEEEEEEEEEec-CCCeEEEEEEEECHHHhCCCHHHHHH---------------------
Confidence 334444444 468889999999999999853 56789999999999999999999999
Q ss_pred cchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 557 PFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 557 ~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
+.+++.+++.|+..+.+.+ .++.+||+++||+..+.
T Consensus 86 ----~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~ 125 (163)
T 1yvk_A 86 ----LDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAI 125 (163)
T ss_dssp ----HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ----HHHHHHHHHCCCCEEEEEcCCCCHHHHHHHHHCCCEEece
Confidence 8999999999999999888 34899999999999875
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.8e-11 Score=127.99 Aligned_cols=122 Identities=15% Similarity=0.237 Sum_probs=93.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-----ccCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeecC------C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK------E 511 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-----~~~~~~~~~~~------l~~~~V~~~~g~iiG~~~l~~~~~------~ 511 (634)
..||+++++|++.+.+++......... ..|+.++.... ...+++++.+|++||++.+.++.. .
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~f~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~va~~~g~lVG~~~~~~~~~~~~g~~~ 89 (406)
T 2i00_A 10 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 89 (406)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred ceEEECCHHHHHHHHHHHHHHcCCCCcccccccccccHHHHHHhhhccccccEEEEEECCEEEEEEEEEEEEEEECCEEE
Confidence 369999999999999997543322110 11222222221 146889999999999999876531 1
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 591 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF 591 (634)
+.++|..++|+|+|||||+|++|| +++++.+++.|+..+.+.+ .+..||+++||
T Consensus 90 ~~~~i~~v~V~P~~Rg~Gig~~Ll-------------------------~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF 143 (406)
T 2i00_A 90 KMGGVTGVGTYPEYANHGLMKDLI-------------------------QTALEEMRQDKQWISYLFP-YNIPYYRRKGW 143 (406)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHH-------------------------HHHHHHHHHTTCCEEEECC-SCHHHHHHTTC
T ss_pred EeccEEEEEEChhhCCCCHHHHHH-------------------------HHHHHHHHhCCCeEEEEEc-cChhhhhccCc
Confidence 357899999999999999999999 8999999999998877765 46999999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+.++.
T Consensus 144 ~~~~~ 148 (406)
T 2i00_A 144 EIMSD 148 (406)
T ss_dssp EEEEE
T ss_pred eEccc
Confidence 98764
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.2e-11 Score=120.82 Aligned_cols=121 Identities=14% Similarity=0.042 Sum_probs=96.9
Q ss_pred ccccCccch-HHHHHHhHHHHHHcccC-ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 450 GTRTAKVTD-LSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 450 ~iR~a~~~D-~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
.||+++.+| ++.+.+++.......+. .+.+.+++...+ ..+++++.+|++||++.+.+......++|..++
T Consensus 174 ~ir~~~~~dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i~~~~ 253 (330)
T 3tt2_A 174 TARTFVPGLDERATYEAVEEAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGSVG 253 (330)
T ss_dssp EEEECCTTTSHHHHHHHHHHHTC----CCCCCHHHHHHHHTTGGGCGGGEEEEEETTTTEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCcccchHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhCCCCCccEEEEEEECCEEEEEEEEecCCCCCcEEEEEee
Confidence 689999999 99999997665433322 234556665432 358899999999999999864445789999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-----HHhHHHHHhCCCeecc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECS 595 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-----~~a~~~Y~k~GF~~~~ 595 (634)
|+|+|||+|+|++|+ ..+.+.+++.|++.+.+.+ +.+.+||+++||+..+
T Consensus 254 v~p~~rg~G~g~~Ll-------------------------~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~~ 308 (330)
T 3tt2_A 254 VRRPWRGRGIALALL-------------------------QEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKH 308 (330)
T ss_dssp ECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEEE
T ss_pred ECHHHhhcCHHHHHH-------------------------HHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEeE
Confidence 999999999999999 8888889889999998865 3588999999999865
|
| >2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-11 Score=114.03 Aligned_cols=126 Identities=13% Similarity=0.054 Sum_probs=91.5
Q ss_pred cccccCccchHHHHHHhHHHHHH-cccCccCCHHHHHhhc----C----cEEEEEECCeEEEEEEEeeecC--------C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----D----SFYVVEREGQIIACAALFPFFK--------E 511 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-~~~~~~~~~~~~~~~l----~----~~~V~~~~g~iiG~~~l~~~~~--------~ 511 (634)
..||+++++|++.+.+++..... ..+....+.++..+.+ . .++|++.+|++||++.+.+... .
T Consensus 22 ~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 101 (198)
T 2qml_A 22 LSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYPF 101 (198)
T ss_dssp EEEEECCGGGHHHHHHHTTSTTTHHHHCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEGGGSGGGGGSCC
T ss_pred EEEEECCHHHHHHHHHHHcCcchhhhccCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecccccccccccC
Confidence 46999999999999998542110 0011111444433333 1 4678889999999999975432 2
Q ss_pred CeEEEE-EEEEC-CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHH
Q 006709 512 KCGEVA-AIGVS-PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTAD 584 (634)
Q Consensus 512 ~~~ei~-~l~V~-p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~ 584 (634)
..+++. .++|+ |+|||||+|++|+ +.+++++.+ .|+..|.+.+ .++++
T Consensus 102 ~~~~~~~~~~v~~p~~rg~Gig~~ll-------------------------~~~~~~a~~~~g~~~i~l~v~~~N~~a~~ 156 (198)
T 2qml_A 102 EEHDQGIHLLIGPQEYLGQGLIYPLL-------------------------LAIMQQKFQEPDTNTIVAEPDRRNKKMIH 156 (198)
T ss_dssp CTTCEEEEEEECSGGGSSSSTHHHHH-------------------------HHHHHHHHTSTTCCEEEECCBTTCHHHHH
T ss_pred CCccEEEEEEEeCHHHcCCCHHHHHH-------------------------HHHHHHHHhCCCCCEEEEecCCCCHHHHH
Confidence 334553 48888 5999999999999 888899876 5999999988 46999
Q ss_pred HHHhCCCeecccccc
Q 006709 585 WFKSRGFRECSIEMI 599 (634)
Q Consensus 585 ~Y~k~GF~~~~~~~~ 599 (634)
||+++||+..+....
T Consensus 157 ~y~k~GF~~~~~~~~ 171 (198)
T 2qml_A 157 VFKKCGFQPVKEVEL 171 (198)
T ss_dssp HHHHTTCEEEEEEEC
T ss_pred HHHHCCCEEEEEEec
Confidence 999999999886544
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=4e-11 Score=127.69 Aligned_cols=118 Identities=19% Similarity=0.344 Sum_probs=94.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHH---hhcCcEEEEEECCeEEEEEEEeeec------CCCeEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAI 519 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~---~~l~~~~V~~~~g~iiG~~~l~~~~------~~~~~ei~~l 519 (634)
..||+++++|++.+.+++...... ..+.+++. .....+++++.+|++||++.+.++. ....++|..+
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v 85 (396)
T 2ozg_A 10 FKYTKASQENIQQLGNILEQCFVM----SFGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 85 (396)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTC----CTTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHhhhcccCcEEEEEECCEEEEEEEEEeccceECCeecceeEEEEE
Confidence 469999999999999997654322 22333333 2223488999999999999998753 2246789999
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
+|+|+|||||+|++|+ +++++.+++.|+..+.+ ...+.+||+++||+..+.
T Consensus 86 ~V~p~~Rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~i~l-n~~a~~~Y~~~GF~~~~~ 136 (396)
T 2ozg_A 86 GIAPEYRGDGAAIALI-------------------------QHTLQEISEQDIPISVL-YPATQRLYRKAGYEQAGS 136 (396)
T ss_dssp EECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEE-CCSCHHHHHHTTCEEEEE
T ss_pred EEChhhccCCHHHHHH-------------------------HHHHHHHHHCCCeEEEE-ccccHHHHHhcCCeEccc
Confidence 9999999999999999 88889999999999998 457899999999998764
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.9e-11 Score=128.31 Aligned_cols=118 Identities=18% Similarity=0.282 Sum_probs=94.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeecC---C---CeEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK---E---KCGEV 516 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l------~~~~V~~~~g~iiG~~~l~~~~~---~---~~~ei 516 (634)
..||+++++|++.+.+++...... +++.+++...+ ..+++++.+|++||++.+.++.. . ..++|
T Consensus 4 ~~iR~~~~~D~~~i~~L~~~~f~~----~~~~~~~~~~~~~~~~~~~~~v~~~~g~lvG~~~~~~~~~~~~~~~~~~~~i 79 (388)
T 3n7z_A 4 MNVIRLKEDKFREALRLSEYAFQY----KVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGV 79 (388)
T ss_dssp CCEEECCGGGHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHCEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHhCCC----CCChHHHHHHHHhhcCcccEEEEEECCEEEEEEEEEeEEEEECCEEEEeeEE
Confidence 469999999999999997654322 33444333221 57899999999999999876532 1 34789
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
..++|+|+|||||+|++|| +++++.+++.|+..+.+. ..+..||+++||+.++.
T Consensus 80 ~~v~V~p~~Rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~~~l~-~~a~~~Y~~~Gf~~~~~ 133 (388)
T 3n7z_A 80 AGVATYPEYRRSGYVKELL-------------------------QHSLQTMKKDGYTVSMLH-PFAVSFYRKYGWELCAN 133 (388)
T ss_dssp EEEEECGGGGGGCHHHHHH-------------------------HHHHHHHHHHTCCEEEEC-CSCHHHHHTTTCEEEEE
T ss_pred EEEEECHHHCCCChHHHHH-------------------------HHHHHHHHHCCCcEEEEc-cCChhhhhhcCcEEecc
Confidence 9999999999999999999 899999999999988776 47899999999998765
|
| >1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=4.1e-11 Score=117.39 Aligned_cols=125 Identities=14% Similarity=0.006 Sum_probs=90.8
Q ss_pred cccccCccchHHHHHHhHHHHH-HcccCccCCHHHHHhhc----C----cEEEEEECCeEEEEEEEeeecC---------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLV-ESGALVRRTDEELLKAL----D----SFYVVEREGQIIACAALFPFFK--------- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~-~~~~~~~~~~~~~~~~l----~----~~~V~~~~g~iiG~~~l~~~~~--------- 510 (634)
..||+++++|++.|.+++.... ...+..+++.+++.+.+ . .+++++.+|++||++.+.....
T Consensus 43 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~iG~~~l~~~~~~~~~~~~~~ 122 (210)
T 1yk3_A 43 YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDA 122 (210)
T ss_dssp EEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCC
T ss_pred EEEEECCHHHHHHHHHHHcChHHHHHhCCCCCHHHHHHHHHHhhcCCcceEEEEEECCEEEEEEEEEcccccccccccCC
Confidence 4699999999999999864321 11111234555443332 1 3678888999999999874221
Q ss_pred -CCeEEEEEEEEC-CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH--cCCcEEEEec----HHh
Q 006709 511 -EKCGEVAAIGVS-PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS--LGLDMLFLLT----TRT 582 (634)
Q Consensus 511 -~~~~ei~~l~V~-p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~--~g~~~l~l~t----~~a 582 (634)
.....+ .++|. |+|||||+|++|+ +.+++++.+ .|+.+|.+.+ .+|
T Consensus 123 ~~~~~g~-~~~i~~p~~rGkGiG~~ll-------------------------~~~~~~a~~~~~g~~~I~l~v~~~N~~A 176 (210)
T 1yk3_A 123 DPYDLGL-HAAIADLSKVNRGFGPLLL-------------------------PRIVASVFANEPRCRRIMFDPDHRNTAT 176 (210)
T ss_dssp CTTCEEE-EEEESCHHHHTTTHHHHHH-------------------------HHHHHHHHHHCTTCCEEEECCBTTCHHH
T ss_pred CCCceEE-EEEEEChhhcCCChHHHHH-------------------------HHHHHHHHhcCCCCCEEEEecCccCHHH
Confidence 111223 56676 9999999999999 888898875 7999999998 579
Q ss_pred HHHHHhCCCeecccccc
Q 006709 583 ADWFKSRGFRECSIEMI 599 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~~~~ 599 (634)
++||+|+||+.++....
T Consensus 177 ~~lyek~GF~~~g~~~~ 193 (210)
T 1yk3_A 177 RRLCEWAGCKFLGEHDT 193 (210)
T ss_dssp HHHHHHHTCEEEEEEEC
T ss_pred HHHHHHcCCEEeEEEeC
Confidence 99999999999886543
|
| >2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=113.92 Aligned_cols=137 Identities=9% Similarity=0.062 Sum_probs=102.4
Q ss_pred ccccCccch-HHHHHHhHHHH-HHcccCcc-CCHHHHHhhcCcEEEEEECCeEEEEEEEeeecC----------------
Q 006709 450 GTRTAKVTD-LSGIKQIIQPL-VESGALVR-RTDEELLKALDSFYVVEREGQIIACAALFPFFK---------------- 510 (634)
Q Consensus 450 ~iR~a~~~D-~~~i~~l~~~~-~~~~~~~~-~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~---------------- 510 (634)
.+|.|+.+| ++++.+|.... .+.++... ...+++...-..+++++.+|++|||+.+.+...
T Consensus 8 ~ir~a~~~~~~~~i~~Lr~~~y~e~~~~~~~~~~~~~~~~~~~~~~a~~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~~~ 87 (198)
T 2g0b_A 8 VARILVAPNERDAARRIVRTTYEAQGYAIDESFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELAAW 87 (198)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTSTTEEEEEEEETTEEEEEEEEEECBTTBCTTHHHHHHHHHHH
T ss_pred eEEEeCCHHHHHHHHHHHHHHHHHhccCcccccchhhcCCCcEEEEEEECCEEEEEEEEEeCCCcCCchhhhchhhhhhh
Confidence 478887666 99999987654 44455433 112222222236888899999999999986432
Q ss_pred ----CCeEEEEEEEECCCC--------cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEe
Q 006709 511 ----EKCGEVAAIGVSPEC--------RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLL 578 (634)
Q Consensus 511 ----~~~~ei~~l~V~p~~--------rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~ 578 (634)
...+||..|+|+|+| ||+|+|..|+ +.+.++|+..|++.+++.
T Consensus 88 ~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~-------------------------~~a~~~a~~~g~~~i~le 142 (198)
T 2g0b_A 88 RGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLF-------------------------TMVLTYALETHIDYLCIS 142 (198)
T ss_dssp HHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHH-------------------------HHHHHHHHHTTCSEEEEE
T ss_pred hhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHH-------------------------HHHHHHHHHcCCCEEEEE
Confidence 247999999999999 9999999999 999999999999999997
Q ss_pred c-HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEe
Q 006709 579 T-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 618 (634)
Q Consensus 579 t-~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k 618 (634)
+ .++++||+++||+..+.... |...+.+.+.|.
T Consensus 143 vn~ra~~FY~k~GF~~~g~~~f-------y~~~g~p~~lm~ 176 (198)
T 2g0b_A 143 INPKHDTFYSLLGFTQIGALKH-------YGTVNAPAIARA 176 (198)
T ss_dssp ECGGGHHHHHHTTCEEEEEEEE-------ETTTTEEEEEEE
T ss_pred eCHHHHHHHHHCCCEEeeCCcc-------CCCCCcceEeee
Confidence 7 67999999999999886432 223346777774
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.3e-11 Score=122.30 Aligned_cols=121 Identities=16% Similarity=0.162 Sum_probs=92.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcc---------cCc----cCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESG---------ALV----RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~---------~~~----~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~ 513 (634)
..||+++++|++.+.+++....... ... ....+.+...+ ..+++++.+|++||++.+.+. ....
T Consensus 6 i~IR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~va~~~g~iVG~~~~~~~-~~~~ 84 (266)
T 3c26_A 6 IVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVSGRPVATIHMEKL-PDGS 84 (266)
T ss_dssp CEEEECCGGGHHHHTTCBSCCSCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEEC-TTSC
T ss_pred EEEEECCHHHHHHHHHHHHHHhhcccccccccccccchhhhHHHHHHHHHhccCCcEEEEEECCEEEEEEEEEEc-CCCe
Confidence 4689999999999988843211110 000 00112222222 368899999999999999864 3577
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++|..++|+|+|||||+|++|+ +.+++.+++.|++.+ +.+ ..+.+||+++
T Consensus 85 ~~I~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~ 138 (266)
T 3c26_A 85 VMLGGLRVHPEYRGSRLGMSIM-------------------------QETIQFLRGKTERLR-SAVYSWNEPSLRLVHRL 138 (266)
T ss_dssp EEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHH
T ss_pred EEEEEEEEChhhcCCCHHHHHH-------------------------HHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHC
Confidence 9999999999999999999999 899999988999999 776 4789999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 139 GF~~~~~ 145 (266)
T 3c26_A 139 GFHQVEE 145 (266)
T ss_dssp TCEEEEE
T ss_pred CCEEeeE
Confidence 9998775
|
| >4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.19 E-value=5.7e-11 Score=118.30 Aligned_cols=126 Identities=12% Similarity=0.066 Sum_probs=90.3
Q ss_pred cccccCccchHHHHHHhHHHHHHccc------C---ccCCHHHHHhhc------CcEEEEEE--CCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGA------L---VRRTDEELLKAL------DSFYVVER--EGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~------~---~~~~~~~~~~~l------~~~~V~~~--~g~iiG~~~l~~~~~- 510 (634)
..||+++++|++++.+++........ . .+.+.+++...+ ...+|+.+ +|+|||++...+...
T Consensus 31 ~~IR~~~~~D~~~i~~~l~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~IVG~a~~~~~~~~ 110 (238)
T 4fd7_A 31 YRVQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFREGSDEIVGVNILDVASRS 110 (238)
T ss_dssp EEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTGGGCHHHHHHHHHHHHHHGGGSCCEEEEETTCCSEEEEEEEEEEETT
T ss_pred EEEEECCHHHHHHHHHHHHhhccCcChhhHHhCCCCChhhHHHHHHHHHHHHhCCcEEEEEECCCCcEEEEEEecccCcc
Confidence 46999999999999998764321110 0 011122222221 34577765 469999998876533
Q ss_pred ----------------------------------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCC
Q 006709 511 ----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGF 556 (634)
Q Consensus 511 ----------------------------------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~ 556 (634)
+.+.++..++|+|+|||||+|++|+
T Consensus 111 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~--------------------- 169 (238)
T 4fd7_A 111 DKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEIL--------------------- 169 (238)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHH---------------------
T ss_pred cccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHH---------------------
Confidence 1235667899999999999999999
Q ss_pred cchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccccc
Q 006709 557 PFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 557 ~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~~ 599 (634)
+.+++.+++.|+..+.+.+ ..+++||+++||+..+....
T Consensus 170 ----~~~~~~~~~~g~~~~~~~~~n~~a~~~y~k~GF~~~~~~~~ 210 (238)
T 4fd7_A 170 ----RARIPLCRAVGLKLSATCFTGPNSQTAATRVGFQEDFTITY 210 (238)
T ss_dssp ----HTHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCEEEEEEEH
T ss_pred ----HHHHHHHHHcCCcEEEEEcCCHHHHHHHHHCCCEEEEEEEe
Confidence 8888999999999776544 57999999999999876433
|
| >2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.18 E-value=1e-10 Score=109.27 Aligned_cols=109 Identities=14% Similarity=0.330 Sum_probs=82.0
Q ss_pred ccccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecC---------CCeEEE
Q 006709 446 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK---------EKCGEV 516 (634)
Q Consensus 446 D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~---------~~~~ei 516 (634)
+.+..||+++.+|++.+.++....... .....++++..+++++|++.+..... ...++|
T Consensus 18 ~~~~~iR~~~~~D~~~i~~l~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i 85 (163)
T 2pr1_A 18 EEFKKFKEYGIQELSMLEELQDNIIEN------------DSTSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLEL 85 (163)
T ss_dssp HHHTTSSSCCHHHHHHHHHHHHCGGGT------------TEEEEEEEEEETTEEEEEEEEEEECTTSSCCSGGGCCEEEE
T ss_pred cceeeeEEcChhhHHHHHHHHHHhhcc------------ccCCceEEEEeCCceeEEEEEEecCCeeeeEEecCCCEEEE
Confidence 345689999999999999986532211 01235677888999999998875432 246899
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecc
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 595 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~ 595 (634)
..++|+|+|||||+|++|| +++++ .|+ .+.+.+ ..|.+||+++||+..+
T Consensus 86 ~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~----~g~-~l~~~~~n~a~~fY~k~GF~~~~ 135 (163)
T 2pr1_A 86 WKLEVLPGYQNRGYGRALV-------------------------EFAKS----FKM-PIRTNPRMKSAEFWNKMNFKTVK 135 (163)
T ss_dssp EEEEECTTSTTSSHHHHHH-------------------------HHHHT----TCS-CEEECCCGGGHHHHHHTTCEECC
T ss_pred EEEEECHHHcCCCHHHHHH-------------------------HHHHH----cCc-EEEEecCchHHHHHHHcCCEEee
Confidence 9999999999999999999 55555 254 355544 4689999999999977
Q ss_pred c
Q 006709 596 I 596 (634)
Q Consensus 596 ~ 596 (634)
.
T Consensus 136 ~ 136 (163)
T 2pr1_A 136 Y 136 (163)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=124.89 Aligned_cols=121 Identities=12% Similarity=0.193 Sum_probs=92.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC------CCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~------~~~~ei~~l~ 520 (634)
..||+++++|++++.+++......... +...+.+...+ ..+++++++|++||++.+.++.. .+.++|..++
T Consensus 7 ~~iR~~~~~D~~~i~~l~~~~f~~~~~-~~~~~~~~~~~~~~~~~va~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v~ 85 (400)
T 2hv2_A 7 KRVKKMGKEEMKEMFDLVIYAFNQEPT-AERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 85 (400)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHHcCCCCc-HHHHHHHHhhcccCcEEEEEECCEEEEEEEEeeeEEEECCEEEEeccEeEEE
Confidence 469999999999999997644332110 00011222222 46889999999999999976531 1357899999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|||||+|++|| +++++.+++.|+..+.+.+ .+..||+++||+.++.
T Consensus 86 V~p~~Rg~Gig~~Ll-------------------------~~~~~~~~~~g~~~~~L~~-~~~~~Y~~~GF~~~~~ 135 (400)
T 2hv2_A 86 SYPEYRGEGGISAIM-------------------------KEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 135 (400)
T ss_dssp ECTTCCSSCHHHHHH-------------------------HHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred EChhhcCCCHHHHHH-------------------------HHHHHHHHHcCceEEEEec-CCHhHHHhcCCEEece
Confidence 999999999999999 8888999999998887765 4589999999998764
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-10 Score=117.35 Aligned_cols=123 Identities=20% Similarity=0.160 Sum_probs=95.1
Q ss_pred cccccCccc-hHHHHHHhHHHHHHccc-CccCCHHHHHhhc-------CcEEEEE------ECCeEEEEEEEeeecC-CC
Q 006709 449 EGTRTAKVT-DLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVE------REGQIIACAALFPFFK-EK 512 (634)
Q Consensus 449 e~iR~a~~~-D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~l-------~~~~V~~------~~g~iiG~~~l~~~~~-~~ 512 (634)
..+|+++.+ |++.+.+++........ ..+++.+++...+ ..+++++ .+|++||++.+..... ..
T Consensus 155 ~~ir~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~g~~vG~~~~~~~~~~~~ 234 (318)
T 1p0h_A 155 VVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHPG 234 (318)
T ss_dssp EEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTSTT
T ss_pred eEEEecCcccchHHHHHHHHHHhccCCCCCCcCHHHHHHHhhCcccCcCceEEEEeccccCCCCcEEEEEEeeccCCCCc
Confidence 358999999 99999999765443221 1345666666544 2578888 7899999998885432 24
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC----------cEEEEec---
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL----------DMLFLLT--- 579 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~----------~~l~l~t--- 579 (634)
.++|..++|+|+|||+|+|+.|+ ..+.+.+++.|+ +.+.+.+
T Consensus 235 ~~~i~~~~V~p~~rg~Glg~~ll-------------------------~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~ 289 (318)
T 1p0h_A 235 LGEVYVLGVDPAAQRRGLGQMLT-------------------------SIGIVSLARRLGGRKTLDPAVEPAVLLYVESD 289 (318)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHC---------CCCEEEEEEETT
T ss_pred eEEEEEEEECHHhccCCHHHHHH-------------------------HHHHHHHHHcccccccccccccceEEEEecCC
Confidence 79999999999999999999999 888888888899 8888877
Q ss_pred -HHhHHHHHhCCCeeccc
Q 006709 580 -TRTADWFKSRGFRECSI 596 (634)
Q Consensus 580 -~~a~~~Y~k~GF~~~~~ 596 (634)
..+.+||+++||++.+.
T Consensus 290 N~~a~~~y~~~GF~~~~~ 307 (318)
T 1p0h_A 290 NVAAVRTYQSLGFTTYSV 307 (318)
T ss_dssp CHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhcCCEEEeE
Confidence 46899999999998764
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2e-10 Score=117.06 Aligned_cols=121 Identities=20% Similarity=0.203 Sum_probs=92.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC-------cEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------SFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~-------~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
..||+++++|++.+.+|+......... ...+.+++...+. .+++++.+|++||++.+.+. . ....+..++
T Consensus 13 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~-~-~~~~~~~~~ 90 (330)
T 3tt2_A 13 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAAAYADVLNR-R-YVQLSVYGY 90 (330)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTTSCHHHHEEEEECTTSSEEEEEEEEEE-T-TTEEEEEEE
T ss_pred eeeCCCChHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHhhccCcccceEEEECCCCcEEEEEEEEec-C-CeEEEEEEE
Confidence 469999999999999998876554432 3446666666542 57777888999999999753 2 334444799
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-------CCcEEEEec----HHhHHHHHhC
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-------GLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-------g~~~l~l~t----~~a~~~Y~k~ 589 (634)
|+|+|||||+|++|+ +++++.+++. +...+.+.+ ..+.+||+++
T Consensus 91 V~p~~rg~Gig~~Ll-------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~~~ 145 (330)
T 3tt2_A 91 VHPRFRGMGLGTWLV-------------------------QWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQH 145 (330)
T ss_dssp ECTTSTTSSHHHHHH-------------------------HHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHHHT
T ss_pred ECccccCccHHHHHH-------------------------HHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHHHhC
Confidence 999999999999999 8888888776 445554444 4689999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+....
T Consensus 146 Gf~~~~~ 152 (330)
T 3tt2_A 146 GYRPVRD 152 (330)
T ss_dssp TCEEEEE
T ss_pred CCceEEE
Confidence 9998654
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A | Back alignment and structure |
|---|
Probab=99.17 E-value=6.6e-11 Score=129.04 Aligned_cols=118 Identities=13% Similarity=0.142 Sum_probs=93.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHH---Hhhc--CcEEEEEEC----CeEEEEEEEeeecC---C----C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---LKAL--DSFYVVERE----GQIIACAALFPFFK---E----K 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~---~~~l--~~~~V~~~~----g~iiG~~~l~~~~~---~----~ 512 (634)
..||+++++|++++.+|+..... .+++.+.+ ...+ ..++|++.+ |++||++.+.++.. . .
T Consensus 29 ~~IR~~~~~D~~~i~~L~~~~F~----~~~~~~~~~~~~~~~~~~~~~va~~~~~~~g~lVG~~~~~~~~~~~~gg~~~~ 104 (428)
T 3r1k_A 29 VTLCSPTEDDWPGMFLLAAASFT----DFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVVLP 104 (428)
T ss_dssp CEEECCCGGGHHHHHHHHHHHCT----TCCCHHHHHHHGGGSCTTCEEEEECC----CCEEEEEEEEEEEEEETTTEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcC----CCCChHHHHHHHhhcCCCcEEEEEecCCCCCcEEEEEEEEeeeeccCCCcccc
Confidence 47999999999999999765432 23333332 2222 367888876 99999999886531 1 3
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCe
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 592 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~ 592 (634)
.++|..++|+|+|||||+|++|| +++++.+++.|+..+.+.. .+..||+++||+
T Consensus 105 ~~~I~~v~V~P~~Rg~Gig~~Ll-------------------------~~~l~~a~~~g~~~~~L~~-~a~~fY~r~GF~ 158 (428)
T 3r1k_A 105 TAGLSFVAVAPTHRRRGLLRAMC-------------------------AELHRRIADSGYPVAALHA-SEGGIYGRFGYG 158 (428)
T ss_dssp EEEEEEEEECTTSCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEC-SSTTSSGGGTCE
T ss_pred eeEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEec-CCHHHHHhCCCE
Confidence 47899999999999999999999 9999999999998888765 467899999999
Q ss_pred eccc
Q 006709 593 ECSI 596 (634)
Q Consensus 593 ~~~~ 596 (634)
.++.
T Consensus 159 ~~~~ 162 (428)
T 3r1k_A 159 PATT 162 (428)
T ss_dssp ECCE
T ss_pred Eeee
Confidence 8775
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.3e-11 Score=129.45 Aligned_cols=118 Identities=14% Similarity=0.193 Sum_probs=94.0
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHH---HHHhhc--CcEEEEEEC--CeEEEEEEEeeec----CC---CeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE---ELLKAL--DSFYVVERE--GQIIACAALFPFF----KE---KCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~---~~~~~l--~~~~V~~~~--g~iiG~~~l~~~~----~~---~~~ 514 (634)
+.||+++++|++++.+|+...... +.+.+ .+...+ ..+++++++ |++||++.+.++. +. ..+
T Consensus 25 m~IR~~~~~D~~~i~~L~~~~F~~----~~~~~~~~~~~~~~~~~~~~va~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~ 100 (422)
T 3sxn_A 25 RTLHTITDDDWTRIALLARFAFGD----IEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVA 100 (422)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHSC----CCCHHHHHHHHTTCCTTCEEEEECTTSSSEEEEEEEEEEEEECTTSCEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhcCCCcEEEEEECCCCcEEEEEEEEEeEeecCCCcccccc
Confidence 479999999999999998765422 22333 232223 368899999 9999999998753 12 348
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeec
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 594 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~ 594 (634)
+|..++|+|+|||||+|++|| +++++.+++.|+..+.+.. .+..||+++||+.+
T Consensus 101 ~I~~v~V~P~~Rg~Gig~~Ll-------------------------~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF~~~ 154 (422)
T 3sxn_A 101 GISFVAVAPTHRRRGVLRAMY-------------------------TELHDRIARAGYPLAVLTA-SEGGIYGRFGYGVA 154 (422)
T ss_dssp EEEEEEECTTTTTSSHHHHHH-------------------------HHHHHHHHHHTCSEEEECC-SSTTSSGGGTCEEC
T ss_pred eEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHhCCCcEEEEec-CCHHHHHhCCCEEe
Confidence 899999999999999999999 8888999999998877764 46789999999998
Q ss_pred cc
Q 006709 595 SI 596 (634)
Q Consensus 595 ~~ 596 (634)
+.
T Consensus 155 ~~ 156 (422)
T 3sxn_A 155 TI 156 (422)
T ss_dssp CE
T ss_pred ce
Confidence 75
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.3e-11 Score=125.41 Aligned_cols=120 Identities=13% Similarity=0.023 Sum_probs=89.1
Q ss_pred cccccCccchHHHHHHhHHHHHH----cccC-c-cCCHHHHHhhc------CcEEEEEECCeEEEEEEEeeecC-CCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE----SGAL-V-RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-EKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~----~~~~-~-~~~~~~~~~~l------~~~~V~~~~g~iiG~~~l~~~~~-~~~~e 515 (634)
..||+++++|++.+.+++..+.. ..+. . ..+.+.+.... ..++|++.++++||++.+.+... ...++
T Consensus 156 l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~e 235 (333)
T 4ava_A 156 LMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTVAE 235 (333)
T ss_dssp EEEEECCTTCGGGTCCCSSCCCHHHHHGGGCC-----HHHHHHHHHHCCSSEEEEEEEETTEEEEEEEEEECSSCTTEEE
T ss_pred EEecCCChhHHHHHHHHHHhCChhhHHHHHcCCCCCCHHHHHHHhccCccccEEEEEEeCCCeEEEEEEEecCCCCCeEE
Confidence 46899999999988777532111 1111 1 11222222111 25678899999999999986544 35677
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
+ .++|+|+|||||+|++|+ +.+++++++.|+..+.+.+ .++++||+|+||
T Consensus 236 ~-~~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 289 (333)
T 4ava_A 236 I-AFTVADAYQGRGIGSFLI-------------------------GALSVAARVDGVERFAARMLSDNVPMRTIMDRYGA 289 (333)
T ss_dssp E-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTC
T ss_pred E-EEEECHHhcCCCHHHHHH-------------------------HHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCC
Confidence 7 799999999999999999 8999999999999999988 579999999999
Q ss_pred eec
Q 006709 592 REC 594 (634)
Q Consensus 592 ~~~ 594 (634)
+..
T Consensus 290 ~~~ 292 (333)
T 4ava_A 290 VWQ 292 (333)
T ss_dssp CCE
T ss_pred cee
Confidence 975
|
| >3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.5e-10 Score=112.60 Aligned_cols=124 Identities=15% Similarity=0.033 Sum_probs=94.3
Q ss_pred ccccccCcc-chHHHHHHhHH---HH-HHcccC--ccCCHHHHHhhc--------CcEEEEEE--CCeEEEEEEEeeec-
Q 006709 448 YEGTRTAKV-TDLSGIKQIIQ---PL-VESGAL--VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF- 509 (634)
Q Consensus 448 Ye~iR~a~~-~D~~~i~~l~~---~~-~~~~~~--~~~~~~~~~~~l--------~~~~V~~~--~g~iiG~~~l~~~~- 509 (634)
...+|++++ +|++.+.+++. .. ...... ...+.++....+ ..+|++.. +|++||++.+....
T Consensus 43 ~l~LR~~~~e~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~~g~~IG~~~l~~~~~ 122 (246)
T 3tcv_A 43 YVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRIDP 122 (246)
T ss_dssp SEEEEECCHHHHHHHHHHHHTSTTHHHHHTTSSSCCCSSHHHHHHHHHHHHHCSSSEEEEEEETTTCSEEEEEEEEEEET
T ss_pred cEEEEECCchhhHHHHHHHhcCCCCHHHHhccCCCCCCCHHHHHHHHHHHhcCCCceEEEEEECCCCCEEEEEEEeeccc
Confidence 357999999 79999999975 21 211111 223555554443 13455554 79999999997553
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH-cCCcEEEEec----HHhHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS-LGLDMLFLLT----TRTAD 584 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~g~~~l~l~t----~~a~~ 584 (634)
....++|..++|+|+|||+|+|++++ ..+.++|.+ +|+.+|.+.+ .++++
T Consensus 123 ~~~~~eig~~~v~p~~rgkGig~~ll-------------------------~~ll~~a~~~~g~~~i~l~v~~~N~~s~~ 177 (246)
T 3tcv_A 123 ANGVIEIGSIYWGPLISRRPAATEAQ-------------------------FLFMQYVFDVLGYRRYEWECHNENGPSRR 177 (246)
T ss_dssp TTTEEEEEEEEECTTTTTSHHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHH
T ss_pred ccCEEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHhcCcEEEEEEccCCCHHHHH
Confidence 34679998888999999999999999 888888866 6999999998 47999
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
+|+|+||+.++.
T Consensus 178 lyek~GF~~~G~ 189 (246)
T 3tcv_A 178 AAERFGFRFEGI 189 (246)
T ss_dssp HHHHHTCEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999999999875
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.5e-11 Score=120.74 Aligned_cols=120 Identities=12% Similarity=0.130 Sum_probs=85.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCcc---CCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~---~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V 521 (634)
..||+++.+|++.+.++...... ....+ ...+.+...+ ..+++++.+|++||++.+.+. ...++|..++|
T Consensus 119 i~Ir~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~~vG~~~~~~~--~~~~~i~~l~V 195 (254)
T 3frm_A 119 VDIQLVSSNNINDYLHVYDAFAR-PFGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIMT--DKTIEIDGFGV 195 (254)
T ss_dssp CEEEECCTTTHHHHHHHHTTSCC-TTCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEEC--SSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHHhhc-cccchhHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc--CCEEEEEEEEE
Confidence 46999999999999888532110 00000 1122233333 267899999999999999853 46789999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
+|+|||||+|++|+ +.+++.|...++..+......|.+||+++||+.++.
T Consensus 196 ~p~~Rg~GiG~~Ll-------------------------~~~~~~a~~~~i~lv~~~n~~a~~~Y~k~GF~~~g~ 245 (254)
T 3frm_A 196 LEEFQHQGIGSEIQ-------------------------AYVGRMANERPVILVADGKDTAKDMYLRQGYVYQGF 245 (254)
T ss_dssp CGGGTTSSHHHHHH-------------------------HHHHHHHTTCCEEEEECSSCTTHHHHHHTTCEEEEE
T ss_pred CHHHcCCCHHHHHH-------------------------HHHHHHhccCcEEEEECCchHHHHHHHHCCCEEeee
Confidence 99999999999999 888888844443332211257999999999999875
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.7e-10 Score=114.71 Aligned_cols=82 Identities=11% Similarity=-0.016 Sum_probs=71.1
Q ss_pred EEEEEE--CCeEEEEEEEeeec-CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHH
Q 006709 490 FYVVER--EGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKK 566 (634)
Q Consensus 490 ~~V~~~--~g~iiG~~~l~~~~-~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 566 (634)
+++++. +|++||++.+.+.. ....++|..++|+|+|||+|+|++|+ ..+.+.
T Consensus 237 ~~~~~~~~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~-------------------------~~~~~~ 291 (339)
T 2wpx_A 237 HTGAVHDATGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLK-------------------------LANLEY 291 (339)
T ss_dssp EEEEEETTTTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHH-------------------------HHHHHH
T ss_pred EEEEEeCCCCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHH-------------------------HHHHHH
Confidence 666776 89999999988543 33578999999999999999999999 888899
Q ss_pred HHH--cCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 567 AAS--LGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 567 a~~--~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
+++ .|+..+.+.+ ..+++||+++||++++.
T Consensus 292 ~~~~~~g~~~~~l~v~~~N~~a~~ly~~~Gf~~~~~ 327 (339)
T 2wpx_A 292 VLRHEPEVRLVETANAEDNHPMIAVNAALGFEPYDR 327 (339)
T ss_dssp HHHHCTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred HHHhCCCceEEEEecccccHHHHHHHHHcCCEEecc
Confidence 998 9999999888 46899999999999764
|
| >2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.5e-10 Score=112.11 Aligned_cols=104 Identities=17% Similarity=0.104 Sum_probs=75.4
Q ss_pred CcEEEEEECCeEEEEEEEeeecC---------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcc
Q 006709 488 DSFYVVEREGQIIACAALFPFFK---------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPF 558 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~~---------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~ 558 (634)
..++|++.+|+||||+.+.+... ...++|..|+|+|+|||||||++||
T Consensus 61 ~~~~vA~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll----------------------- 117 (211)
T 2q04_A 61 GRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLL----------------------- 117 (211)
T ss_dssp CEEEEEEETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHH-----------------------
T ss_pred cEEEEEEECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHH-----------------------
Confidence 36789999999999999875421 0357898899999999999999999
Q ss_pred hHHHHHHHHHHcCC-------------cEEEEec----HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEEeecC
Q 006709 559 LRDYIEKKAASLGL-------------DMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 621 (634)
Q Consensus 559 ~~~~i~~~a~~~g~-------------~~l~l~t----~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~ 621 (634)
+++++.++..+. +++.+.+ ..|.+||+++||+..+... .... . ....++|.++.
T Consensus 118 --~~~~~~a~~~~~i~l~~~~~~~~~~~~~~L~V~~~N~~A~~lY~k~GF~~~g~~~--~~~~----~-~~d~~~M~r~g 188 (211)
T 2q04_A 118 --EVSMLDPAMEHYLILTTEYYWHWDLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDD--PEIA----S-HPANCLMARIG 188 (211)
T ss_dssp --HHHHTSGGGGGSEEEEEECGGGCCHHHHCCCHHHHHHHHHHHHHHTTCEEECCCC--HHHH----T-STTCEEEEEEC
T ss_pred --HHHHHHHHHcCCceeeeehhhhcCccccccchhhhhHHHHHHHHHCCCEEeccCC--cccc----c-cHHHHhhhhhc
Confidence 777776666554 2333333 4689999999999988642 1111 1 23378898876
Q ss_pred CC
Q 006709 622 PD 623 (634)
Q Consensus 622 ~~ 623 (634)
+.
T Consensus 189 ~~ 190 (211)
T 2q04_A 189 KH 190 (211)
T ss_dssp TT
T ss_pred CC
Confidence 43
|
| >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6e-10 Score=96.41 Aligned_cols=80 Identities=21% Similarity=0.302 Sum_probs=67.3
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.|++++.++++||++.+.+. .+...+|..++|+|+|||||+|++|| +.+++.++
T Consensus 12 ~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~ 65 (102)
T 1r57_A 12 KFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLL-------------------------KAVVEHAR 65 (102)
T ss_dssp EEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEECCCeEEEEEEEEeC-CCCEEEEEEEEECHHHCCCCHHHHHH-------------------------HHHHHHHH
Confidence 45555578999999999854 33668999999999999999999999 88999999
Q ss_pred HcCCcEEEEecHHhHHHHHhCC-Ceecc
Q 006709 569 SLGLDMLFLLTTRTADWFKSRG-FRECS 595 (634)
Q Consensus 569 ~~g~~~l~l~t~~a~~~Y~k~G-F~~~~ 595 (634)
+.|++.+.+. ..+..||+++| |+...
T Consensus 66 ~~g~~~i~l~-~~~~nfy~k~~~~~~~~ 92 (102)
T 1r57_A 66 ENNLKIIASC-SFAKHMLEKEDSYQDVY 92 (102)
T ss_dssp HHTCEEEESS-HHHHHHHHHCGGGTTTB
T ss_pred HcCCCEEEcC-HHHHHHHHhChHHHHHh
Confidence 9999887665 56889999998 87654
|
| >3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=108.82 Aligned_cols=117 Identities=11% Similarity=0.026 Sum_probs=85.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccC-CHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 527 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rg 527 (634)
..||+++++|++.+.+.. +.+.+...+ +.+.+.+. ...++++.+|++||++.+... .....++ .++|+|+|||
T Consensus 124 ~~ir~~d~~d~~~~~~~~---w~~~~~~~~~~~~~~~~~-g~~~v~~~~g~iVG~~~~~~~-~~~~~ei-~i~v~p~~rG 197 (249)
T 3g3s_A 124 FDMKLIDRNLYETCLVEE---WSRDLVGNYIDVEQFLDL-GLGCVILHKGQVVSGASSYAS-YSAGIEI-EVDTREDYRG 197 (249)
T ss_dssp SEEEECCHHHHHHHHHST---TTGGGTTTSSSHHHHHHH-CCEEEEEETTEEEEEEEEEEE-ETTEEEE-EEEECGGGTT
T ss_pred cEEEECCHHHHHHHHhcc---CHHHHHHhccCHHHHHhC-CcEEEEEECCEEEEEEEEEEe-cCCeEEE-EEEEChHhcC
Confidence 368999999999886321 222221111 33444333 456777889999999988754 4455666 7999999999
Q ss_pred CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 528 QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 528 qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
||+|++|+ +.+++.+++.|+....... ..+.++|+|+||+.++.
T Consensus 198 kGlg~~Ll-------------------------~~li~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~ 242 (249)
T 3g3s_A 198 LGLAKACA-------------------------AQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKA 242 (249)
T ss_dssp SSHHHHHH-------------------------HHHHHHHHHTTCEEECEESSHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHH-------------------------HHHHHHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeee
Confidence 99999999 8888999998987433322 67999999999998764
|
| >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=110.84 Aligned_cols=119 Identities=12% Similarity=0.018 Sum_probs=87.6
Q ss_pred cccccCccc-hHHHHHHhHHHHHHcccC---ccCCHHHHHhhc--------CcEEEEE--ECCeEEEEEEEeeecCCCeE
Q 006709 449 EGTRTAKVT-DLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVE--REGQIIACAALFPFFKEKCG 514 (634)
Q Consensus 449 e~iR~a~~~-D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l--------~~~~V~~--~~g~iiG~~~l~~~~~~~~~ 514 (634)
..+|+++++ |++.+.+++.......+. .....+.+...+ ...+++. .+|++ |++.+.+... .+
T Consensus 17 l~lR~~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~-G~~~~~~~~~--~~ 93 (301)
T 2zw5_A 17 LELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVP-GMAGLLGGTD--VP 93 (301)
T ss_dssp CEEEECCHHHHHHHHHHHHTCHHHHTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEECCBTTTBCC-EEEEEESSCS--SC
T ss_pred EEEEeCchhcCHHHHHHHhcCchhhhhcCCChHHHHHHHHHHHHHhhccCCceEEEEEECCCCCe-EEEEEecCCC--eE
Confidence 469999999 999999997643322221 112223332211 1234443 36899 9999985543 77
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHHHhC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
+| .++|+|+|||||+|++|+ ..+++++ +.+|+..|.+.+ .+++++|+|+
T Consensus 94 ~i-g~~v~~~~~g~G~g~~l~-------------------------~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~ 147 (301)
T 2zw5_A 94 GL-TWLLRRDSWGHGYATEAA-------------------------AAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARV 147 (301)
T ss_dssp EE-EEEECTTSTTTTHHHHHH-------------------------HHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHT
T ss_pred EE-EEEECHhHcCCCHHHHHH-------------------------HHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHc
Confidence 88 589999999999999999 8888888 457999999988 5799999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+.++.
T Consensus 148 GF~~~g~ 154 (301)
T 2zw5_A 148 GLTERAR 154 (301)
T ss_dssp TCEEEEE
T ss_pred CCcCcce
Confidence 9999875
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.2e-09 Score=108.58 Aligned_cols=116 Identities=15% Similarity=0.167 Sum_probs=81.9
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEEC---CeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVERE---GQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~---g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
.+|+++++|++.|.+|+..........+.+ ++....+ ..++|++.+ |++||++.+.+....... +..++|+
T Consensus 9 ~~R~~~~~D~~~i~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~g~~vG~~~~~~~~~~~~~-~~~l~v~ 86 (318)
T 1p0h_A 9 WRSALTADEQRSVRALVTATTAVDGVAPVG-EQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGAGGA-MAELVVH 86 (318)
T ss_dssp CBSCCCHHHHHHHHHHHHHHHHHHSSCSSC-HHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC---CCC-EEEEEEC
T ss_pred eecCCCHHHHHHHHHHHHHHHHhcCCCchh-HHHHHHhhcCCCcEEEEEeCCCCCcEEEEEEEECCCCCCcE-EEEEEEC
Confidence 457999999999999987665432222323 3333333 257888888 999999999864332222 3478999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||||+|++|+ +++++.+ ...+.+.+ ..+..||+++||+....
T Consensus 87 p~~rg~Gig~~Ll-------------------------~~~~~~~----~~~~~~~~~~~~~~a~~~y~~~Gf~~~~~ 135 (318)
T 1p0h_A 87 PQSRRRGIGTAMA-------------------------RAALAKT----AGRNQFWAHGTLDPARATASALGLVGVRE 135 (318)
T ss_dssp GGGCSSSHHHHHH-------------------------HHHHHHT----TTCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred ccccCCCHHHHHH-------------------------HHHHHhh----cCEEEEEEcCCCHHHHHHHHHCCCeeEeE
Confidence 9999999999999 7776665 23344544 46889999999998763
|
| >2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.2e-08 Score=101.03 Aligned_cols=115 Identities=19% Similarity=0.215 Sum_probs=87.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcc-cC-ccCCHH----HHHhhc---------CcEEEEE-ECCeEEEEEEEeeecCCCe
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESG-AL-VRRTDE----ELLKAL---------DSFYVVE-REGQIIACAALFPFFKEKC 513 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~-~~-~~~~~~----~~~~~l---------~~~~V~~-~~g~iiG~~~l~~~~~~~~ 513 (634)
.||+++++|++.+.+++....... +. ...+.+ .+...+ ..++|++ .+|++||++.+.+.. ..
T Consensus 95 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~l~~~~-~~- 172 (235)
T 2ft0_A 95 GAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELN-AT- 172 (235)
T ss_dssp CCEECCGGGHHHHHHHHHHHTTTSTTCTTTSCTTHHHHHHHHHHHHHHTCCTTEEEEEEECTTSCEEEEEEEEECS-SS-
T ss_pred eEEeCCHHhHHHHHHHHHhhHhhccCCCCCCCHHHHHHHHHHHHHHhhccCCCceEEEEECCCCcEEEEEEEEecC-CC-
Confidence 699999999999999987655443 21 111111 122222 2578888 799999999998632 22
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
...|+|+| |+|+|++|+ ..+++++++.|+..+.+.+ ..+.+||+++
T Consensus 173 --~~~i~v~~---g~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~ 222 (235)
T 2ft0_A 173 --DARIGLLA---GRGAGAELM-------------------------QTALNWAYARGKTTLRVATQMGNTAALKRYIQS 222 (235)
T ss_dssp --EEEEEEEE---CTTCHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHT
T ss_pred --ceEEEEEc---CCCHHHHHH-------------------------HHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHC
Confidence 25789999 999999999 8888999999999999988 4699999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+..+.
T Consensus 223 GF~~~~~ 229 (235)
T 2ft0_A 223 GANVEST 229 (235)
T ss_dssp TCEEEEE
T ss_pred CCEEeEE
Confidence 9998654
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 | Back alignment and structure |
|---|
Probab=98.86 E-value=8.7e-09 Score=107.70 Aligned_cols=111 Identities=15% Similarity=0.167 Sum_probs=82.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
..+|+++++|++.+.+++. .. ...+.+.+...+ ..+.+.. .+|++||++...+ .++|..++|+|+
T Consensus 174 l~lR~l~~~D~~~i~~~~~----~~--~~~~~~~i~~~i~~~~~~~i~~~~~g~~VG~~~~~~-----~~~i~~l~V~p~ 242 (312)
T 1sqh_A 174 FEIRRLRAEDAAMVHDSWP----NK--GEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQND-----FSGLGMLQVLPK 242 (312)
T ss_dssp EEEECCCGGGHHHHHHTCT----TC--SSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEECT-----TSSEEEEEECGG
T ss_pred eEEEECCHHHHHHHHHHhC----cC--CcchHHHHHHHHhcCCcEEEEEecCCCEEEEEEEcC-----CceEEEEEECHH
Confidence 3699999999999988742 11 112344443332 2344444 5799999987642 356888999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH-HcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~-~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|+ ..+.++++ +.|+. +.+.+ .+|++||+|+||+..+.
T Consensus 243 ~rgkGiG~~ll-------------------------~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyeklGF~~~g~ 293 (312)
T 1sqh_A 243 AERRGLGGLLA-------------------------AAMSREIARGEEIT-LTAWIVATNWRSEALLKRIGYQKDLV 293 (312)
T ss_dssp GCSSSHHHHHH-------------------------HHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred HcCCCHHHHHH-------------------------HHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHCCCEEeee
Confidence 99999999999 88888887 88998 77766 47999999999998653
|
| >2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.77 E-value=3.1e-08 Score=113.16 Aligned_cols=112 Identities=18% Similarity=0.179 Sum_probs=79.4
Q ss_pred HHHHHhHHHHHHcccCccCCHHHHHhhcC----cEEEEEECCeEEEEEEEeeec--------------------------
Q 006709 460 SGIKQIIQPLVESGALVRRTDEELLKALD----SFYVVEREGQIIACAALFPFF-------------------------- 509 (634)
Q Consensus 460 ~~i~~l~~~~~~~~~~~~~~~~~~~~~l~----~~~V~~~~g~iiG~~~l~~~~-------------------------- 509 (634)
..+.+++.-++..++ +.+.+++...++ .++|++.+|+|+|++.+....
T Consensus 364 ~~L~~~~~Ll~~aHY--r~sp~dL~~llD~p~~~l~va~~~g~IVG~i~v~~eG~l~~~~~~~~~~g~rRp~G~lip~~l 441 (671)
T 2zpa_A 364 ETPLKVYQLLSGAHY--RTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSL 441 (671)
T ss_dssp HHHHHHHHHHHHHSS--SBCHHHHHHHHHCTTEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHTSCCCSSCHHHHHH
T ss_pred HHHHHHHHHHHhccc--CCCHHHHHHHhcCCCceEEEEEECCeEEEEEEEEEcCCcCHHHHHHHHhcccCCCCcchhHHH
Confidence 445555555565554 346667766553 788999999999999985321
Q ss_pred ----------CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEE-e
Q 006709 510 ----------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFL-L 578 (634)
Q Consensus 510 ----------~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l-~ 578 (634)
.....+|..|+|+|+|||+|||++|| +++++.++..+...+.. .
T Consensus 442 ~~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL-------------------------~~~e~~a~~~~~l~v~~~~ 496 (671)
T 2zpa_A 442 AAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLI-------------------------AGALQYTQDLDYLSVSFGY 496 (671)
T ss_dssp HHHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHH-------------------------HHHHHTCCSCSEEEEEEEC
T ss_pred HHhhcchhhcccCceEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHhcCCEEEEEecC
Confidence 02346899999999999999999999 77877763333322222 2
Q ss_pred cHHhHHHHHhCCCeeccccc
Q 006709 579 TTRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 579 t~~a~~~Y~k~GF~~~~~~~ 598 (634)
+..+.+||+|+||+.+.+..
T Consensus 497 n~~ai~FYek~GF~~v~ig~ 516 (671)
T 2zpa_A 497 TGELWRFWQRCGFVLVRMGN 516 (671)
T ss_dssp CHHHHHHHHHTTCEEEEECS
T ss_pred CHHHHHHHHHCCCEEEeeee
Confidence 36799999999999986543
|
| >1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.4e-07 Score=89.73 Aligned_cols=119 Identities=9% Similarity=0.132 Sum_probs=88.6
Q ss_pred ccccCccchHHHHHHhHHHHH--HcccCccC----CHHHHHhhcCcEEEEEECCeEEEEEEEeeec--------------
Q 006709 450 GTRTAKVTDLSGIKQIIQPLV--ESGALVRR----TDEELLKALDSFYVVEREGQIIACAALFPFF-------------- 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~--~~~~~~~~----~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~-------------- 509 (634)
..+..+.+++.++..|-.... +.++..+. ..+++...-.+++++..+|++|||+.+.|..
T Consensus 10 ~~~~~~~~~~~~~~~LR~~VFv~E~g~~~~~~~~~E~D~~D~~~~~~lv~~~~g~~vGt~Rll~~~~~~~l~~~f~~~~~ 89 (201)
T 1ro5_A 10 RREEFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLH 89 (201)
T ss_dssp EGGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGT
T ss_pred ccccCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCEEEEEEeCCeEEEEEecCCCCCCchhhhhhhhhcC
Confidence 356667788888888865543 23332111 1111222113566677789999999998642
Q ss_pred ------CCCeEEEEEEEECCCCcC----CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec
Q 006709 510 ------KEKCGEVAAIGVSPECRG----QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT 579 (634)
Q Consensus 510 ------~~~~~ei~~l~V~p~~rg----qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t 579 (634)
.....|+..++|+|++|+ .|+|..|+ ..+.+++++.|++.+++.+
T Consensus 90 ~~~~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~-------------------------~~~~~~a~~~g~~~~~~~a 144 (201)
T 1ro5_A 90 GKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAM-------------------------RALARYSLQNDIQTLVTVT 144 (201)
T ss_dssp TCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHH-------------------------HHHHHHHHTTTCCEEEEEE
T ss_pred CCCCCCCCCEEEeeeeEECchhhccccchHHHHHHH-------------------------HHHHHHHHHCCCCEEEEEE
Confidence 234589999999999998 78999999 9999999999999999998
Q ss_pred -HHhHHHHHhCCCee
Q 006709 580 -TRTADWFKSRGFRE 593 (634)
Q Consensus 580 -~~a~~~Y~k~GF~~ 593 (634)
..+.+||+++||..
T Consensus 145 ~~~~~~fy~r~G~~~ 159 (201)
T 1ro5_A 145 TVGVEKMMIRAGLDV 159 (201)
T ss_dssp EHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHcCCCe
Confidence 67899999999985
|
| >3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-06 Score=82.85 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=83.6
Q ss_pred ccccCccchHHHHHHhHHHHH--HcccCcc-----CCHHHHHhhcCcEEEEEE-CCeEEEEEEEeeec------------
Q 006709 450 GTRTAKVTDLSGIKQIIQPLV--ESGALVR-----RTDEELLKALDSFYVVER-EGQIIACAALFPFF------------ 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~--~~~~~~~-----~~~~~~~~~l~~~~V~~~-~g~iiG~~~l~~~~------------ 509 (634)
.+...+.+++.++..|-...+ +.++..+ ...+++...-.++++... +|++|||+.+.|..
T Consensus 7 ~~~~l~~~~~~~~~~LR~~VFv~Eqg~~~~~~~~~~E~D~~D~~~~h~lv~~~~~g~~vgt~Rll~~~~~~~l~~~f~~l 86 (201)
T 3p2h_A 7 EAGRLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKMERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQEVFPHL 86 (201)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHTTTSCCSCCCCSSCCCCCTTCCTTCEEEEEECTTSCEEEEEEEEETTSCCHHHHTCGGG
T ss_pred ccccCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccCCCCCCCEEEEEEcCCCeEEEEEEeccccCCccccccChhh
Confidence 356677888888888866544 3344322 111111111124566665 69999999998742
Q ss_pred -------CCCeEEEEEEEECCCC-cC----CCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEE
Q 006709 510 -------KEKCGEVAAIGVSPEC-RG----QGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFL 577 (634)
Q Consensus 510 -------~~~~~ei~~l~V~p~~-rg----qGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l 577 (634)
.....|+..++|+|+| |+ .+.|..|+ ..+.+++++.|++.+++
T Consensus 87 ~~~~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~-------------------------~~~~~~a~~~g~~~~~~ 141 (201)
T 3p2h_A 87 LADEAPRSAHVWELSRFAATPEEGADAGSLAWSVRPML-------------------------AAAVECAARRGARQLIG 141 (201)
T ss_dssp CSSCCCCCTTEEEEEEEEEC----------CTTHHHHH-------------------------HHHHHHHHHTTCSEEEE
T ss_pred cCCccCCCCCEEEEEEEEEcchhcccccccChHHHHHH-------------------------HHHHHHHHHCCCCEEEE
Confidence 1456899999999999 65 34589999 99999999999999999
Q ss_pred ec-HHhHHHHHhCCCeeccc
Q 006709 578 LT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 578 ~t-~~a~~~Y~k~GF~~~~~ 596 (634)
.+ ..+.+||+++||....+
T Consensus 142 ~aq~~~~~~y~rlG~~~~~~ 161 (201)
T 3p2h_A 142 VTFCSMERMFRRIGVHAHRA 161 (201)
T ss_dssp EEEHHHHHHHHHHTCEEEES
T ss_pred EECHHHHHHHHHcCCCeEEc
Confidence 88 67899999999986433
|
| >1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=6.4e-07 Score=78.72 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=56.6
Q ss_pred EEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEe
Q 006709 499 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLL 578 (634)
Q Consensus 499 iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~ 578 (634)
.+|++.+.+.......+|..++|+|+|||||+|++|| +.+++.|++.|++.+.+
T Consensus 22 ~vG~i~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~l- 75 (103)
T 1xmt_A 22 HEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLC-------------------------VAAFEHASSHSISIIPS- 75 (103)
T ss_dssp SSSEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHH-------------------------HHHHHHHHHTTCEEEEC-
T ss_pred cEEEEEEEEcCCCCEEEEEEEEECHHHcCCCHHHHHH-------------------------HHHHHHHHHcCCeEEEE-
Confidence 5788888754333578999999999999999999999 99999999999997764
Q ss_pred cHHhHH-HHHhCC-Cee
Q 006709 579 TTRTAD-WFKSRG-FRE 593 (634)
Q Consensus 579 t~~a~~-~Y~k~G-F~~ 593 (634)
++.+.. ||+++. |..
T Consensus 76 ~~~~~~~f~~k~~~~~~ 92 (103)
T 1xmt_A 76 CSYVSDTFLPRNPSWKP 92 (103)
T ss_dssp SHHHHHTHHHHCGGGGG
T ss_pred ehhhhHHHHHhChhHHh
Confidence 456777 999984 543
|
| >1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.8e-06 Score=88.56 Aligned_cols=125 Identities=13% Similarity=0.187 Sum_probs=82.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc----------------C-cEEEEEE--CCeEEEEEEEeeec
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------------D-SFYVVER--EGQIIACAALFPFF 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l----------------~-~~~V~~~--~g~iiG~~~l~~~~ 509 (634)
.||+++.+|+++|.+|....- .++. .+.+.+.+.+.+ . .++|+++ +|+|||++.+.+..
T Consensus 5 ~IRpa~~~Dl~aL~~La~e~G-~G~tsLP~d~e~L~~rI~~S~~sf~~~~~~~~~~~ylfVlED~~~g~VVG~~gI~a~v 83 (342)
T 1yle_A 5 VMRPAQAADLPQVQRLAADSP-VGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVASA 83 (342)
T ss_dssp EEEECCGGGHHHHHHHHHHSC-TTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESST
T ss_pred EEecCCHHHHHHHHHHHHHhC-CCcCCCCCCHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEECCCCEEEEEEEEEEec
Confidence 589999999999999965431 1111 233333333222 1 4668886 69999999775431
Q ss_pred C-----------------------------------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccC
Q 006709 510 K-----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (634)
Q Consensus 510 ~-----------------------------------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~ 554 (634)
+ ..+.||..|+|+|+|||+|+|+.|...+.
T Consensus 84 G~~~PfY~yr~~t~v~~S~~L~v~~~~~~L~L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~--------------- 148 (342)
T 1yle_A 84 GFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRL--------------- 148 (342)
T ss_dssp TSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHH---------------
T ss_pred CCCccceeeeecceeeeccccccccccceEEeecCCCCceEEEEEEECHHHhCCCHHHHHHHHHH---------------
Confidence 1 35689999999999999999999994333
Q ss_pred CCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhCCCeecccc
Q 006709 555 GFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 555 ~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~GF~~~~~~ 597 (634)
-+| ...++.=-++|+.++ ..--.||+..|=+-.+..
T Consensus 149 ------lfi-A~~~~rF~~~v~AEmrG~~De~G~SPFW~~lg~~Ff~md 190 (342)
T 1yle_A 149 ------LFM-ASHPERFADAVVVEIVGYSDEQGESPFWNAVGRNFFDLN 190 (342)
T ss_dssp ------HHH-HHCGGGSCSEEEEECCBCCCTTCCCHHHHHTGGGTSCCC
T ss_pred ------HHH-HHChhhhhhhhheeccCccCCCCCCccHhHhhcccCCCC
Confidence 222 222445567888888 234568888876555543
|
| >1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.11 E-value=4.7e-06 Score=87.52 Aligned_cols=101 Identities=10% Similarity=0.235 Sum_probs=75.0
Q ss_pred cccccCccchHHHHHHhHHHH---H----HcccCccCCHHHHHhhcCcEEEEEE-CCeEEEEEEEeeecC----------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPL---V----ESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK---------- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~---~----~~~~~~~~~~~~~~~~l~~~~V~~~-~g~iiG~~~l~~~~~---------- 510 (634)
..||.++.+| +.+.++++.+ . +.+..+.... .....++|++. ++++|||+.++++..
T Consensus 134 ~eI~~a~~~D-~~~~~L~~r~q~~~l~fIE~~~~id~dd----~~w~~~~v~e~~~~~ivG~~t~y~~~~~~~~~~f~~~ 208 (320)
T 1bob_A 134 FVVYKSSLVD-DFARRMHRRVQIFSLLFIEAANYIDETD----PSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDED 208 (320)
T ss_dssp EEEEEECSCS-HHHHHHHHHHTHHHHHHSTTCCCCCTTC----TTEEEEEEEETTTCCEEEEEEEEEECCC---------
T ss_pred EEEEEeccCC-HHHHHHHHHHHHHHHhcccCCcccCccC----CCceEEEEEEccCCcEEEEEEEEeeeccCCccccccc
Confidence 4699999999 9998887643 1 2222222211 23346777775 799999999986543
Q ss_pred ---CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH-HHHHHcCCcEEEEec
Q 006709 511 ---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE-KKAASLGLDMLFLLT 579 (634)
Q Consensus 511 ---~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~a~~~g~~~l~l~t 579 (634)
.....|..+.|.|.|||||+|++|+ +.++ .+++..++..|.+.-
T Consensus 209 ~~~~~R~rIsq~lVlPpyQgkGiG~~Ll-------------------------~~i~~~~~~~~~i~~ItVeD 256 (320)
T 1bob_A 209 IDKKFRAKISQFLIFPPYQNKGHGSCLY-------------------------EAIIQSWLEDKSITEITVED 256 (320)
T ss_dssp CCCCEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHCTTEEEEEESS
T ss_pred ccCCceEEEEEEEEcHHHhCCCHHHHHH-------------------------HHHHHHHHhcCCCceEEEEC
Confidence 2357899999999999999999999 8888 666778888888766
|
| >1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.6e-05 Score=79.75 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=67.5
Q ss_pred cEEEEEECCeEEEEEEEeeecC-------------------CCeEEEEEEEECCCCcCCC-------HHHHHHhhhcccc
Q 006709 489 SFYVVEREGQIIACAALFPFFK-------------------EKCGEVAAIGVSPECRGQG-------QGDKLLGLCIWPL 542 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~-------------------~~~~ei~~l~V~p~~rgqG-------iG~~Ll~~~i~~~ 542 (634)
.++++.++|++|||+.+.|... .. .|+..++|+|+ |++| +|..|+
T Consensus 73 ~hll~~~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~------- 143 (230)
T 1kzf_A 73 RYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLF------- 143 (230)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHH-------
T ss_pred eEEEEEcCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHH-------
Confidence 4666677999999999987431 22 79999999999 9887 999999
Q ss_pred cccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCee
Q 006709 543 LSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 593 (634)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~ 593 (634)
..+.+++++.|++.+++.+ ..+.+||+++||..
T Consensus 144 ------------------~al~~~a~~~G~~~l~~~aq~~~~~fy~r~G~~~ 177 (230)
T 1kzf_A 144 ------------------LAMVNWAQNNAYGNIYTIVSRAMLKILTRSGWQI 177 (230)
T ss_dssp ------------------HHHHHHHHHTTCSEEEEEEEHHHHHHHHHHCCCC
T ss_pred ------------------HHHHHHHHHCCCCEEEEEeCHHHHHHHHHcCCCe
Confidence 9999999999999999988 67899999999975
|
| >3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.1e-06 Score=78.09 Aligned_cols=132 Identities=11% Similarity=0.023 Sum_probs=82.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHH-------HHHhhc-----CcEE-EEE-ECCeEEEEEEEeeecCCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------ELLKAL-----DSFY-VVE-REGQIIACAALFPFFKEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~-------~~~~~l-----~~~~-V~~-~~g~iiG~~~l~~~~~~~~~ 514 (634)
..+|+++++|++.+.+++. ... +.+.+ .+.... ...| ++. .++++||++.+.+ ....+
T Consensus 14 l~LR~~~~~D~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~--~~~~~ 85 (176)
T 3shp_A 14 VYLRAMVEDDKHHAAAWFD----SRF--PVNAARAEAFLKEKLQGDPWDARWHLLAIVRRSDEAVVGSCRIEF--GKQTA 85 (176)
T ss_dssp EEEEECCHHHHHHGGGTCC----CSC--CSCSSSCCCCCCGGGGCCGGGCEEEEEEEEETTTCCEEEEEEEEE--CSSEE
T ss_pred EEEeeCCHHHHHHHHHHHh----CCC--CCCHHHHHHHHHHHhhcCccccCceEEEEEECCCCcEEEEEEEec--CCCEE
Confidence 4689999999988887643 111 11111 111110 1233 333 3789999999942 34678
Q ss_pred EEEEE----EE-CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHH
Q 006709 515 EVAAI----GV-SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 515 ei~~l----~V-~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~ 584 (634)
+| .+ ++ +|+||| +.++ ..+.+++ ..+++++|.+.+ .++++
T Consensus 86 ei-g~~~~~~i~~~~~~G----~ea~-------------------------~~ll~~af~~~~~~~i~~~v~~~N~~s~~ 135 (176)
T 3shp_A 86 SL-RFHMAPWLDDADVLR----AEAL-------------------------ELVVPWLRDEHELLVITVEIAADEQRTLA 135 (176)
T ss_dssp EE-EEEECTTCSCHHHHH----HHHH-------------------------HHHHHHHHHHSCCSEEEEEEETTCHHHHH
T ss_pred EE-EEeecceecChhHhh----HHHH-------------------------HHHHHHHHhhCCeEEEEEEEcCCCHHHHH
Confidence 88 55 55 899998 6666 5555665 457999999988 57999
Q ss_pred HHHhCCCeecccccchhHhhhhccCCCCceEEEeecCC
Q 006709 585 WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 622 (634)
Q Consensus 585 ~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~~ 622 (634)
+|+|+||+..+... ... ..+......++|..|.+
T Consensus 136 l~ek~GF~~~G~~r--~~~--~~~g~~~D~~~~~ll~~ 169 (176)
T 3shp_A 136 AAEAAGLKAAVRMR--EAI--ARAGHRVDLLIYQAVDP 169 (176)
T ss_dssp HHHHTTCEEEEEEE--EEE--EETTEEEEEEEEEEECT
T ss_pred HHHHCCCEEEEEee--eeE--EeCCEEEEEEEEEEcch
Confidence 99999999988631 111 12222345566655543
|
| >3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00092 Score=61.62 Aligned_cols=79 Identities=13% Similarity=0.183 Sum_probs=64.3
Q ss_pred EEEEEECCeEEEEEEEeeecC-CCeEEEEEEEECCCCcCCC---HHHHHHhhhcccccccccccccccCCCcchHHHHHH
Q 006709 490 FYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQG---QGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEK 565 (634)
Q Consensus 490 ~~V~~~~g~iiG~~~l~~~~~-~~~~ei~~l~V~p~~rgqG---iG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 565 (634)
|.+-..++++||.+.+....+ ...+++ .+++.++ |+| +|+.-+ ..+.+
T Consensus 22 fiI~~~~~~~IG~i~i~~Id~~nr~a~i-~I~Igk~--gkG~~~ygtEAl-------------------------~l~l~ 73 (135)
T 3dns_A 22 YLITDKYGITIGRIFIVDLNKDNRFCMF-RMKIYKQ--GKSINTYIKEIL-------------------------SVFME 73 (135)
T ss_dssp EEEEETTCCEEEEEEEEEEETTTTEEEE-EEEECCC--SSCCHHHHHHHH-------------------------HHHHH
T ss_pred EEEECCCCCEEEEEEEEEeccccCEEEE-EEEEeeC--CCChHHHHHHHH-------------------------HHHHH
Confidence 444445789999999987654 466888 7888777 999 999999 66666
Q ss_pred HH-HHcCCcEEEEec--HHhHHHHHhCCCeeccc
Q 006709 566 KA-ASLGLDMLFLLT--TRTADWFKSRGFRECSI 596 (634)
Q Consensus 566 ~a-~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~ 596 (634)
++ .++++.+|.+.+ .+|.+.|+++||+..++
T Consensus 74 y~F~elnlhKi~l~v~~~~ai~~yeKlGF~~EG~ 107 (135)
T 3dns_A 74 FLFKSNDINKVNIIVDEEVSTQPFVELGFAFEGI 107 (135)
T ss_dssp HHHHHSCCSEEEEEEETTSCSHHHHHTTCEEEEE
T ss_pred HHHHhcCceEEEEEEecHHHHHHHHHcCCeEeee
Confidence 65 678999999988 67999999999999886
|
| >2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.33 E-value=0.13 Score=53.79 Aligned_cols=67 Identities=16% Similarity=0.309 Sum_probs=48.3
Q ss_pred CcEEEEEEC---C----eEEEEEEEeeecC---CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCc
Q 006709 488 DSFYVVERE---G----QIIACAALFPFFK---EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFP 557 (634)
Q Consensus 488 ~~~~V~~~~---g----~iiG~~~l~~~~~---~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~ 557 (634)
..|++.+.. | .++||+.++.++. .....|+.+-|.|.|||+|+|++|+
T Consensus 183 ~~y~l~ek~~~~~~~~y~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll---------------------- 240 (324)
T 2p0w_A 183 HYFLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLL---------------------- 240 (324)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHH----------------------
T ss_pred EEEEEEEEccCCCCCceEEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHH----------------------
Confidence 355555542 2 5899999976642 2347899999999999999999999
Q ss_pred chHHHHHHHHHH-cCCcEEEEec
Q 006709 558 FLRDYIEKKAAS-LGLDMLFLLT 579 (634)
Q Consensus 558 ~~~~~i~~~a~~-~g~~~l~l~t 579 (634)
+.+-+.+.. ..+..|.++-
T Consensus 241 ---~~iy~~~~~~~~v~eiTVED 260 (324)
T 2p0w_A 241 ---ETVHRYYTEFPTVLDITAED 260 (324)
T ss_dssp ---HHHHHHHHTCTTBCCBEESS
T ss_pred ---HHHHHHHhcCCCeEEEEEEC
Confidence 777777655 3455555544
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.35 E-value=0.64 Score=46.49 Aligned_cols=99 Identities=11% Similarity=0.093 Sum_probs=60.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 529 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqG 529 (634)
.+|+++..| +.+.++-....... .....+.+...-..+.++ ++ +||+.+.+ ..|.-++. ++.+
T Consensus 160 ~v~~~~~~d-~~l~~~d~~~~~~~--r~~~l~~~~~~~~~~~~~--~~--~Gy~~~r~------~~igp~~a----~~~~ 222 (288)
T 3ddd_A 160 GVVEVNKIP-NWVKEIDKKAFGDD--RIRVLEAYMRRGARLLCA--EN--EGFGLVYR------GKIGPLVA----DSPR 222 (288)
T ss_dssp SEEEESSCC-HHHHHHHHHHHSSC--CHHHHHHHHHTTCEEEEE--TT--TEEEEEET------TEEEEEEE----SSHH
T ss_pred ceeEcccCc-HHHHHHhHHhCCcc--HHHHHHHHHcCCCcEEEE--cC--ceEEEEee------cccccccc----CCHH
Confidence 578899999 88888744322111 000112222222355555 44 99998875 22333332 7889
Q ss_pred HHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 530 QGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 530 iG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
+++.|+ ..+... |. +.+.+ ..+..||+++||+....
T Consensus 223 ~a~~Ll-------------------------~~l~~~----g~--~~ldv~~~n~~a~~l~~~~Gf~~~~~ 262 (288)
T 3ddd_A 223 VAEKIL-------------------------LKAFQL----GA--REIIIPEVNKDALELIKIFKPSQVTS 262 (288)
T ss_dssp HHHHHH-------------------------HHHHHT----TC--CEEEEETTCHHHHHHHGGGCCEEEEE
T ss_pred HHHHHH-------------------------HHHHhC----CC--EEEEecCCCHHHHHHHHHcCCeEeee
Confidence 999999 555444 54 56666 34899999999998653
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=89.60 E-value=0.29 Score=49.57 Aligned_cols=41 Identities=7% Similarity=0.063 Sum_probs=33.9
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
..+|.+..++++||++++. . +..++ .++|+|+||.+| +.|+
T Consensus 43 ~~~~~~~~~~~~~G~~~v~---~-~~~~~-~~~~~~~~~~~~--~~lf 83 (276)
T 3iwg_A 43 AKHFGFYVNKNLVGFCCVN---D-DGYLL-QYYLQPEFQLCS--QELF 83 (276)
T ss_dssp SEEEEEEETTEEEEEEEEC---T-TSEEE-EEEECGGGHHHH--HHHH
T ss_pred ceEEEEEECCEEEEEEEEc---C-Cceee-EEEecHHHHhhH--HHHH
Confidence 5789999999999999997 2 22445 999999999877 7777
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=88.54 E-value=3.9 Score=43.63 Aligned_cols=100 Identities=19% Similarity=0.139 Sum_probs=67.0
Q ss_pred cccCccchHHHHHHhHHHHHHcccC-------ccCCHHHHHhhcC------cEEEE-E--ECCeEEEEEEEeeec----C
Q 006709 451 TRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALD------SFYVV-E--REGQIIACAALFPFF----K 510 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~~~~~~~~~-------~~~~~~~~~~~l~------~~~V~-~--~~g~iiG~~~l~~~~----~ 510 (634)
......+|-.++.+++.-+.++-+. ...+.+-+.-.+. .+-+. . ..+++||++...|.. +
T Consensus 48 W~~~d~~~~~~l~evy~lL~~nYVED~d~~FRf~YS~efL~WaL~~Pg~~~~whiGVR~~~~~kLVgfIsaiP~~irv~~ 127 (385)
T 4b14_A 48 WYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHK 127 (385)
T ss_dssp EEECCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTTEEEEEEEEEEEEEEETT
T ss_pred EEecCCCCHHHHHHHHHHHHhhccCCCcceEeccCCHHHHhhhhcCCCCCcceEEEEEEccCCeEEEEEeeeEEEEEEec
Confidence 3444555666666665544443221 3446666655553 22232 2 369999999987752 1
Q ss_pred --CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEE
Q 006709 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDML 575 (634)
Q Consensus 511 --~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l 575 (634)
-+.+||.-|+||+.+|+++++-.|+ +++...+...|+-.-
T Consensus 128 ~~~~~~eINFLCVHKklRsKrlAPvLI-------------------------kEitRR~n~~gI~qA 169 (385)
T 4b14_A 128 RTIKMAEVNFLCVHKTLRSKRLAPVLI-------------------------KEITRRINLENIWQA 169 (385)
T ss_dssp EEEEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHTTTCCEE
T ss_pred eEeeeEEEEEEEEehhHhccCccHHHH-------------------------HHHHHHhhccCceEE
Confidence 2458999999999999999999999 888888877776553
|
| >4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A* | Back alignment and structure |
|---|
Probab=85.91 E-value=6 Score=38.22 Aligned_cols=57 Identities=16% Similarity=0.195 Sum_probs=38.6
Q ss_pred CHHHHHhhcCcEEEEEEC------CeEEEEEEEe-----eecCC-Ce-----EEEEEEEECCCCcCCCHHHHHH
Q 006709 479 TDEELLKALDSFYVVERE------GQIIACAALF-----PFFKE-KC-----GEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 479 ~~~~~~~~l~~~~V~~~~------g~iiG~~~l~-----~~~~~-~~-----~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
+.+.+...-...|+..+. |.++|+.-+- .+... .. ..|..++|+|.+|++|+|++|+
T Consensus 63 s~~rl~~~~~~lYll~d~~~~~g~g~viG~LKvG~K~Lf~~d~~g~~~e~~~lcIlDFyV~es~QR~G~Gk~lf 136 (191)
T 4hkf_A 63 SAAKLQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLDFYVTETLQRHGYGSELF 136 (191)
T ss_dssp CHHHHHHSCCEEEEEEETTHHHHTCEEEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSHHHHHH
T ss_pred CHHHhccCCceEEEEecccccCCCceEEEEEEecCcceEEEcCCCCEEEEeccEEEeEEEeeeeeccCHHHHHH
Confidence 555555543456666653 5799987653 12111 11 4567899999999999999999
|
| >3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A | Back alignment and structure |
|---|
Probab=85.39 E-value=6.8 Score=40.33 Aligned_cols=63 Identities=14% Similarity=0.077 Sum_probs=50.4
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++++..+|++||.+.+... ....+....+.+|+ +..+-+..|+ -.+.++|.
T Consensus 230 ~l~~a~~~g~~vA~~l~~~~--~~~~~~~~~g~~~~-~~~~~~~ll~-------------------------~~~i~~a~ 281 (336)
T 3gkr_A 230 RIFVAEREGKLLSTGIALKY--GRKIWYMYAGSMDG-NTYYAPYAVQ-------------------------SEMIQWAL 281 (336)
T ss_dssp EEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECSS-CCTTHHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEEE--CCEEEEEeeeECch-hccChhHHHH-------------------------HHHHHHHH
Confidence 56788899999998877633 34555556788899 8888888888 88889999
Q ss_pred HcCCcEEEEec
Q 006709 569 SLGLDMLFLLT 579 (634)
Q Consensus 569 ~~g~~~l~l~t 579 (634)
+.|++..-+..
T Consensus 282 ~~G~~~~Dfgg 292 (336)
T 3gkr_A 282 DTNTDLYDLGG 292 (336)
T ss_dssp HTTCSEEEEEE
T ss_pred HCCCCEEECcC
Confidence 99999877765
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=85.34 E-value=5.6 Score=42.46 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=78.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecC-----CCe---
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK-----EKC--- 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~------~~~V~~~~g~iiG~~~l~~~~~-----~~~--- 513 (634)
..+|++++.|++++.++++.+...--+ ...+.+++...+. ..||++.+|+|.+++.++..+. .+.
T Consensus 226 ~glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l 305 (385)
T 4b14_A 226 KNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTL 305 (385)
T ss_dssp TTCEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEE
T ss_pred CccccCcHhhHHHHHHHHHHHHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCccee
Confidence 569999999999999999887665333 3458888888773 4678899999999999864321 221
Q ss_pred --EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 514 --GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 514 --~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
+++ -..+...- -=..|+ ..+.-.|++.|++...+.. -.-..|.+++.
T Consensus 306 ~~AY~-fY~~~~~~----~l~~l~-------------------------~dali~ak~~~fDVfnaL~~~~N~~fl~~lk 355 (385)
T 4b14_A 306 NAAYS-FYNVTTTA----TFKQLM-------------------------QDAILLAKRNNFDVFNALEVMQNKSVFEDLK 355 (385)
T ss_dssp CEEEE-CCCEESSS----CHHHHH-------------------------HHHHHHHHHTTCSEEEEESCTTGGGGTTTTT
T ss_pred eeEeE-EEeeecCc----cHHHHH-------------------------HHHHHHHHHCCCCEEEeccccchHHHHHHcC
Confidence 222 11122211 112455 6666788999999877766 33456889999
Q ss_pred Ceec
Q 006709 591 FREC 594 (634)
Q Consensus 591 F~~~ 594 (634)
|..-
T Consensus 356 F~~G 359 (385)
T 4b14_A 356 FGEG 359 (385)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9763
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=84.05 E-value=5.4 Score=42.44 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=65.4
Q ss_pred ccCccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEEE-E--ECCeEEEEEEEeeec----C-
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYVV-E--REGQIIACAALFPFF----K- 510 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V~-~--~~g~iiG~~~l~~~~----~- 510 (634)
.....+|-.++.+++.-+.++.+ -...+.+-+.-++. .+-|. . ..+++||++...|.. +
T Consensus 46 ~~~dl~~~~~l~ely~lL~~nYVEDdd~~FRF~YS~efL~WaL~pPg~~~~whvGVR~~~s~kLVgfIsaiP~~irv~~~ 125 (383)
T 3iu1_A 46 DALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDT 125 (383)
T ss_dssp EECCTTSHHHHHHHHHHHHHHSCBCTTSCEEECCCHHHHHHHHSSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTE
T ss_pred EecCCCCHHHHHHHHHHHHhccccCCcceEEeeCCHHHHHHhccCCCCCcceEEEEEEccCCeEEEEEecceEEEEEcce
Confidence 34445566666666654444322 24556666665553 22232 2 379999999987642 1
Q ss_pred -CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCc
Q 006709 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLD 573 (634)
Q Consensus 511 -~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~ 573 (634)
-+.+||.-|+||+..|+++++-.|+ +++...+...|+-
T Consensus 126 ~~~~~eINFLCVhKkLRsKrLAPvLI-------------------------kEITRRvn~~gI~ 164 (383)
T 3iu1_A 126 EKKMVEINFLCVHKKLRSKRVAPVLI-------------------------REITRRVHLEGIF 164 (383)
T ss_dssp EEEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHTTTCC
T ss_pred EeeeeEEEEEEEcHhHHhCCCcHHHH-------------------------HHHHHHhhhcchh
Confidence 2458999999999999999999999 7777777766663
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=84.00 E-value=7.3 Score=41.83 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=64.7
Q ss_pred CccchHHHHHHhHHHHHHcc-------cCccCCHHHHHhhcC------cEEEEE---ECCeEEEEEEEeeec--------
Q 006709 454 AKVTDLSGIKQIIQPLVESG-------ALVRRTDEELLKALD------SFYVVE---REGQIIACAALFPFF-------- 509 (634)
Q Consensus 454 a~~~D~~~i~~l~~~~~~~~-------~~~~~~~~~~~~~l~------~~~V~~---~~g~iiG~~~l~~~~-------- 509 (634)
...+|-+++.+++.-+.++. +-..++.+-+.-++. .+.|.. ..+++||++...|..
T Consensus 61 ~dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~~~whiGVR~~~~~kLVgFIsgiP~~irv~~~~~ 140 (421)
T 2wuu_A 61 PNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPSYIPDWHVAVRRKADKKLLAFIAGVPVTLRMGTPKY 140 (421)
T ss_dssp CCTTCHHHHHHHHHHHHHHSCC---CCEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTCCEEEEEEEEEEEEECSCCHH
T ss_pred cCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhcCCCCCCcceEEEEEEccCCcEEEEEeeeeEEEEeccccc
Confidence 44455555555555444332 224556666655552 333333 369999999887642
Q ss_pred -----------------CC--CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc
Q 006709 510 -----------------KE--KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570 (634)
Q Consensus 510 -----------------~~--~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~ 570 (634)
+. +.+||.-|+||+.+|+++++-.|+ +++...+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLI-------------------------kEITRRvn~~ 195 (421)
T 2wuu_A 141 MKVKAQEKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILI-------------------------KEVTRRVNRT 195 (421)
T ss_dssp HHHHHHHTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHT
T ss_pred ccccccccccccchhcccceeeeeeEEEEEechhHhhccCcHHHH-------------------------HHHHHHhhhc
Confidence 11 248999999999999999999999 8888888877
Q ss_pred CCcE
Q 006709 571 GLDM 574 (634)
Q Consensus 571 g~~~ 574 (634)
|+-.
T Consensus 196 gI~q 199 (421)
T 2wuu_A 196 NVWQ 199 (421)
T ss_dssp TCCC
T ss_pred chhh
Confidence 7643
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=83.70 E-value=6.9 Score=41.69 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=66.8
Q ss_pred ccCccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEEEE---ECCeEEEEEEEeeec---CC-
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYVVE---REGQIIACAALFPFF---KE- 511 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V~~---~~g~iiG~~~l~~~~---~~- 511 (634)
.....+|-+++.++++-+.++.+ -..++.+-+.-++. .+.|.. ..+++||++...|.. .+
T Consensus 27 ~~~Dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~ 106 (392)
T 1iyk_A 27 STLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKS 106 (392)
T ss_dssp EECCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTT
T ss_pred EEcCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHhhhccCCCCccceEEEEEEcCCCcEEEEEeeeeEEEEEcCc
Confidence 34455666666666654444322 24556666665552 333333 369999999887642 12
Q ss_pred ----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcE
Q 006709 512 ----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574 (634)
Q Consensus 512 ----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~ 574 (634)
+.+||.-|+||+..|+++++-.|+ +++...+...|+-.
T Consensus 107 ~~~~~~~eINFLCVhKkLRsKRLAPvLI-------------------------kEITRRvn~~gI~Q 148 (392)
T 1iyk_A 107 NKVIDSVEINFLCIHKKLRNKRLAPVLI-------------------------KEITRRVNKQNIWQ 148 (392)
T ss_dssp TEEEEEEEEEEEEECGGGTTSSCHHHHH-------------------------HHHHHHHHTTTCCC
T ss_pred CceEEEEEEEEEEEcHhHhhcCCcHHHH-------------------------HHHHHHhhhcccee
Confidence 368999999999999999999999 88888887777643
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=82.70 E-value=6.2 Score=42.34 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=78.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecC-----CCe---
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK-----EKC--- 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~------~~~V~~~~g~iiG~~~l~~~~~-----~~~--- 513 (634)
..+|++++.|++++.+|++.+...-.+ ...+.+++...+. ..||++++|+|-+++.++..+. ++.
T Consensus 262 ~glR~m~~~Dvp~v~~LL~~yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l 341 (421)
T 2wuu_A 262 SGLREMKPSDVPQVRRILMNYLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNIL 341 (421)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CE
T ss_pred CCcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhh
Confidence 469999999999999999888765444 4458888888774 4688888999999998874322 111
Q ss_pred --EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCC
Q 006709 514 --GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRG 590 (634)
Q Consensus 514 --~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~G 590 (634)
+++ -.++....+ =..|+ ..+.-.|++.|++-..+.. -.-..|.+.+.
T Consensus 342 ~aAY~-fY~~~t~~~----l~~Lm-------------------------~DaLi~Ak~~gfDVfNaL~~mdN~~fL~~lK 391 (421)
T 2wuu_A 342 NAAYV-HYYAATSMP----LHQLI-------------------------LDLLIVAHSRGFDVCNMVEILDNRSFVEQLK 391 (421)
T ss_dssp EEEEE-EEEEESSSC----HHHHH-------------------------HHHHHHHHHTTCCEEEEESCTTGGGGTTTTT
T ss_pred hhhhh-hhhccCCcc----HHHHH-------------------------HHHHHHHHHcCCcEEecccccccHHHHHhCC
Confidence 232 223333221 12344 6666778899999877766 33455778888
Q ss_pred Cee
Q 006709 591 FRE 593 (634)
Q Consensus 591 F~~ 593 (634)
|-.
T Consensus 392 Fg~ 394 (421)
T 2wuu_A 392 FGA 394 (421)
T ss_dssp CEE
T ss_pred CCC
Confidence 876
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=82.54 E-value=5.7 Score=42.69 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=66.4
Q ss_pred cCccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEEEE---ECCeEEEEEEEeeecC------
Q 006709 453 TAKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYVVE---REGQIIACAALFPFFK------ 510 (634)
Q Consensus 453 ~a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V~~---~~g~iiG~~~l~~~~~------ 510 (634)
....+|-+++.+++.-+.++.+ -..++.+-+.-.+. .+-|.. ..+++||++...|..-
T Consensus 50 ~~Dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv~~~~ 129 (422)
T 1iic_A 50 SIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQ 129 (422)
T ss_dssp ECCTTCHHHHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTEE
T ss_pred EcCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhccCCCCccceEEEEEEccCCcEEEEEeceeEEEEEcceE
Confidence 4455666666666654444322 24556666665552 333322 3699999999877421
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcE
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~ 574 (634)
-+.+||.-|+||+..|+++++-.|+ +++...+...|+-.
T Consensus 130 ~~~~eINFLCVHKKLRsKRLAPVLI-------------------------kEITRRvn~~gI~Q 168 (422)
T 1iic_A 130 VPSVEINFLCVHKQLRSKRLTPVLI-------------------------KEITRRVNKCDIWH 168 (422)
T ss_dssp EEEEEEEEEEECGGGTTSSCHHHHH-------------------------HHHHHHHHTTTCCC
T ss_pred EEeeEEEEEEechhhhhccCcHHHH-------------------------HHHHHHhhhcchhe
Confidence 2458999999999999999999999 88888887777643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 634 | ||||
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 6e-35 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 1e-34 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 1e-10 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 1e-26 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 2e-10 | |
| d1e19a_ | 313 | c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcu | 8e-15 | |
| d1b7ba_ | 307 | c.73.1.1 (A:) Carbamate kinase {Enterococcus faeci | 5e-10 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 5e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 2e-07 | |
| d1r57a_ | 102 | d.108.1.1 (A:) Hypothetical protein SA2309 {Staphy | 7e-08 | |
| d1i12a_ | 157 | d.108.1.1 (A:) Glucosamine-phosphate N-acetyltrans | 4e-07 | |
| d1qsra_ | 162 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 1e-06 | |
| d2gana1 | 182 | d.108.1.1 (A:1-182) Hypothetical protein PH0736 {P | 1e-06 | |
| d1n71a_ | 180 | d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransfera | 6e-06 | |
| d1ygha_ | 164 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 7e-06 | |
| d2hv2a2 | 285 | d.108.1.10 (A:2-286) Hypothetical protein EF1021 { | 5e-05 | |
| d1yx0a1 | 151 | d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bac | 6e-05 | |
| d1z4ra1 | 162 | d.108.1.1 (A:497-658) Catalytic domain of GCN5 his | 1e-04 | |
| d2i6ca1 | 160 | d.108.1.1 (A:1001-1160) Putative acetyltransferase | 1e-04 | |
| d2i00a2 | 291 | d.108.1.10 (A:10-300) Putative acetyltransferase E | 2e-04 | |
| d1y9wa1 | 140 | d.108.1.1 (A:1-140) Probable acetyltransferase BC2 | 6e-04 | |
| d1y9ka1 | 152 | d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillu | 6e-04 | |
| d2aj6a1 | 118 | d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S | 9e-04 | |
| d1m4ia_ | 181 | d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransfera | 0.001 | |
| d1sqha_ | 297 | d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fr | 0.001 | |
| d1vkca_ | 149 | d.108.1.1 (A:) Putative acetyltransferase PF0028 { | 0.004 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 132 bits (332), Expect = 6e-35
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 25/257 (9%)
Query: 74 TYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGIR 132
T + + Q K EA PY+ G T V+ G + S L +D+ + +GI
Sbjct: 1 TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGIN 60
Query: 133 FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGG-IRMMIEAKLSPGPP 191
V+V G QI LL E+ ++ R+TD+ ++ GG + I ++
Sbjct: 61 PVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLIN---- 116
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVT 242
RHG S+ +G++ + AK+ V + +D G GEV V+V
Sbjct: 117 -----RHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVG 167
Query: 243 RMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESG 301
+ + G + +++ +G S+GE N N VA A A++A+KL+ + + ++D+ G
Sbjct: 168 LLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQG 227
Query: 302 HLIRFLTLQEADSLIRQ 318
++ L+ ++ + LI
Sbjct: 228 QVLTGLSTEQVNELIAD 244
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 130 bits (328), Expect = 1e-34
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
Query: 82 QFVKWFREAWPYLWAHRGGTFVVIISGEIVSSP-YLDPILKDIAFLHHLGIRFVLVPGTH 140
V EA PY+ G TFV+ G + ++DI L + GI+ ++V G
Sbjct: 4 DTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGG 63
Query: 141 VQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGD 200
I +++ + G E + +R+TD +++ G N +
Sbjct: 64 PAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGK--------------INKEIVMN 109
Query: 201 SSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG 260
+ V + + + D G G+VKKV+ + ++ + +++ +G
Sbjct: 110 LNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVG 169
Query: 261 YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318
G N N A A ++ A+KLI + D + + G LI LT EA+ LIR
Sbjct: 170 IGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 60.2 bits (145), Expect = 1e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 108 bits (269), Expect = 1e-26
Identities = 57/251 (22%), Positives = 89/251 (35%), Gaps = 13/251 (5%)
Query: 73 ETYNPVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPYL-DPILKDIAFLHHLGI 131
E + EA P+L G VV G ++ L D+AFL + GI
Sbjct: 2 EALPT---HIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGI 58
Query: 132 RFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP 191
V+V G QI +L G E + G +R+T E L A G L
Sbjct: 59 HPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHG 118
Query: 192 ICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 251
+ G+ ++ + D G G+V +V+ M + + G
Sbjct: 119 PYAVGITGEDAQLF---------TAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAG 169
Query: 252 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQE 311
+ ++S L + G V N N A A A A+ A+KL+ + D L L +
Sbjct: 170 RIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229
Query: 312 ADSLIRQRVKQ 322
+ Q +
Sbjct: 230 DTGTLAQLLPT 240
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.9 bits (144), Expect = 2e-10
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443
G + ++ A GV H++DG + +L+ELF G GT V
Sbjct: 244 GMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKV 288
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 73.4 bits (179), Expect = 8e-15
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 34/235 (14%)
Query: 116 LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175
+ + IA + G V+ G Q+ LL G + A +
Sbjct: 29 VRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWI 88
Query: 176 GG-IRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAA------------KRK 222
G I+ ++ +L + + + + + + K
Sbjct: 89 GYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREK 148
Query: 223 GVVDGVDYG--------ATGEVKKVDVTRMR--------ERLDGGCLVILSNLGYSSSGE 266
G + D G + V+ ++ GG V + G
Sbjct: 149 GWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGV 208
Query: 267 VLNCNTYEVATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEADSLI 316
+ A + AD + + D E +R + ++E
Sbjct: 209 EAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYY 263
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Score = 58.8 bits (141), Expect = 5e-10
Identities = 27/259 (10%), Positives = 64/259 (24%), Gaps = 39/259 (15%)
Query: 99 GGTFVVIISGEIVSSP---------YLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSE 149
G VV + G + S L + L G R ++ G Q+ LL +
Sbjct: 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQ 60
Query: 150 RGHEAKYLGRYRITDSESLAAAMEAAGGIRMMIEAKLSPGPP-----------ICNIRRH 198
+ D+ + + +L+ + +
Sbjct: 61 QQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADE 120
Query: 199 GDSSRWHEVGVSVASGNFLAAKRK--------GVVDGVDYGATGEVKKVDVTRMRERLDG 250
+ +G + A + G + + + + +
Sbjct: 121 AFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKN 180
Query: 251 GCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-----DE 299
+ I G G + + A ++AD L+ + +
Sbjct: 181 DIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKP 240
Query: 300 SGHLIRFLTLQEADSLIRQ 318
+ +T+ E + +
Sbjct: 241 DEKQLTNVTVAELEEYKQA 259
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (123), Expect = 5e-08
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445
G + ++ AA R + V + L LF MGT + +
Sbjct: 213 GMIVKVNAALDAARTLGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 50.2 bits (118), Expect = 2e-07
Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 18/220 (8%)
Query: 103 VVIISGEIVSSP-YLDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRY 160
++ + G ++ S L+ + + R V+V G +D+L+ K
Sbjct: 6 IIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGL 65
Query: 161 RITDSESLAAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAK 220
R+T ++ + A G + I + +V
Sbjct: 66 RVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKV------------- 112
Query: 221 RKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACA 280
+ G G + + L+ G L ++S++G + G+++N N + ATA A
Sbjct: 113 ---TQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALA 169
Query: 281 LAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRV 320
+ AD ++ ILD G I +T +A+ LI Q +
Sbjct: 170 ATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI 209
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Score = 48.4 bits (115), Expect = 7e-08
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 479 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLC 538
++ E+ + + FY+ + E +A + F + GVS E GQG G KLL
Sbjct: 2 SNLEIKQGENKFYIGDDENNALAEIT-YRFVDNNEINIDHTGVSDELGGQGVGKKLLKAV 60
Query: 539 IWPLLSETRYDHISTNG-FPFLRDYIEK 565
+ R +++ F + +EK
Sbjct: 61 VE----HARENNLKIIASCSFAKHMLEK 84
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.1 bits (113), Expect = 4e-07
Identities = 25/149 (16%), Positives = 48/149 (32%), Gaps = 5/149 (3%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD-SFYVVEREGQIIACAALFPFFK 510
R + DL + + ++ L G + + +L+K + + + E + I
Sbjct: 8 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 67
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570
++ VAA G R L G I + + L D +
Sbjct: 68 KRTETVAATGNIIIERKIIHELGLCG-HIEDIA--VNSKYQGQGLGKLLIDQLVTIGFDY 124
Query: 571 GLDMLFLLTTRTA-DWFKSRGFRECSIEM 598
G + L +++ GF +EM
Sbjct: 125 GCYKIILDCDEKNVKFYEKCGFSNAGVEM 153
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Score = 46.6 bits (110), Expect = 1e-06
Identities = 19/136 (13%), Positives = 44/136 (32%), Gaps = 27/136 (19%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S +++ + ++I + ++ EVA + V+ + +G G +L+
Sbjct: 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLM------------- 94
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRI 607
+ + ++ L A +FK +GF + M E+ + I
Sbjct: 95 ------------NKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTK-EHRMPQEKWKGYI 141
Query: 608 NLSRNSKYYMKKLLPD 623
+ P
Sbjct: 142 KDYDGGTLMECYIHPY 157
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.1 bits (111), Expect = 1e-06
Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 54/185 (29%)
Query: 430 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 488
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 489 SFYVVEREGQIIACAALFP--------------FFKEKCGEVAAIGVSPECRGQGQGDKL 534
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 535 LGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590
L ++ K+ SLG D +++T + ++ +G
Sbjct: 128 L-------------------------EFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKG 161
Query: 591 FRECS 595
FRE
Sbjct: 162 FREIM 166
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Length = 180 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Score = 44.9 bits (105), Expect = 6e-06
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 27/138 (19%)
Query: 442 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 501
M+ S+ ++ LS + ++ P + EE++ + +++
Sbjct: 1 MIISE-FDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEV-EEMMNPERIAVAAVDQDELVG 58
Query: 502 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRD 561
P + E+ + V R G +L+ +
Sbjct: 59 FIGAIPQYGITGWELHPLVVESSRRKNQIGTRLV-------------------------N 93
Query: 562 YIEKKAASLGLDMLFLLT 579
Y+EK+ AS G ++L T
Sbjct: 94 YLEKEVASRGGITIYLGT 111
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.3 bits (104), Expect = 7e-06
Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 28/137 (20%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S V+ + ++ PF K + E+ +S + +G G L+
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLM------------- 95
Query: 549 DHISTNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKR 606
++++ + FL +FK +GF + I +
Sbjct: 96 ------------NHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGY 142
Query: 607 INLSRNSKYYMKKLLPD 623
I +LP
Sbjct: 143 IKDYEGGTLMQCSMLPR 159
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Score = 43.3 bits (101), Expect = 5e-05
Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Query: 452 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF- 509
+ ++ + ++ + R+ E L + Y + Q+ + PF
Sbjct: 6 KKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQV 65
Query: 510 -----KEKCGEVAAIGVSPECRGQGQGDKLLGLCI 539
+ + + PE RG+G ++ +
Sbjct: 66 NFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEML 100
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Score = 41.3 bits (96), Expect = 6e-05
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 40/177 (22%)
Query: 455 KVTDLSGIKQIIQPLVESGALVRR-TDEELLKALD---------SFYVVEREGQIIACAA 504
K+ DL+G +Q++ + E + + E + AL +F+ ++ C A
Sbjct: 4 KIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGA 62
Query: 505 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE 564
L GE+ ++ S +G + + + + G+ L
Sbjct: 63 LKELDTR-HGEIKSMRTSASHLRKG---------VAKQVLQHIIEEAEKRGYERLS---- 108
Query: 565 KKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 620
L+ + + A ++S GF+ C E NS + KKL
Sbjct: 109 -------LETGSMASFEPARKLYESFGFQYC-------EPFADYGEDPNSVFMTKKL 151
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 1e-04
Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 29/135 (21%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD 549
+ ++G++I F + E+ V+ + +G G L+
Sbjct: 54 TLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLM-------------- 99
Query: 550 HISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRIN 608
+++++ + A +FK +GF + +P+ R
Sbjct: 100 -----------NHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSK--DIKVPKSRYLGYI 146
Query: 609 LSRNSKYYM-KKLLP 622
M +L P
Sbjct: 147 KDYEGATLMECELNP 161
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 33/178 (18%)
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 503
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 504 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563
+ + + + V+P RG G L+G+
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMEN--------------------LAR 105
Query: 564 EKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 621
E+ A L F + G++ +I + +R+ L M K L
Sbjct: 106 EQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVAL-----IQMDKPL 158
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 17/106 (16%)
Query: 452 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKAL---DSFYVVEREGQII 500
+ + + +++ + ESG +R + + + + E Q+I
Sbjct: 4 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 63
Query: 501 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLGLCIW 540
+ A++P K G V +G PE G L+ +
Sbjct: 64 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALE 109
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Score = 38.3 bits (88), Expect = 6e-04
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRY 548
S V EG+I +F + + V R G G +LL +
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYHLH--IDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 549 DHISTNGFPFLRDYIEK 565
+ + ++ +K
Sbjct: 99 LILLDSFSFQAPEFYKK 115
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Score = 38.5 bits (89), Expect = 6e-04
Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 30/112 (26%)
Query: 490 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYD 549
YV ++ G +I L + K E+ I V+ +G+G
Sbjct: 37 TYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGI------------------- 76
Query: 550 HISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597
L + + A G+ L + T ++ GFR SI+
Sbjct: 77 ------GKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 122
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Score = 37.2 bits (85), Expect = 9e-04
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 15/99 (15%)
Query: 452 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEE------------LLKALDSFYVVERE 496
RT + + IKQI L+ + + L D Y+ E E
Sbjct: 2 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 61
Query: 497 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 535
GQ+IA ++ + + V P+ R G +L
Sbjct: 62 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLK 100
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.3 bits (88), Expect = 0.001
Identities = 25/122 (20%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 452 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYV-VEREGQIIACAALFPF- 508
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 509 -----FKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563
+CG V + V + RGQ LL + Y + + R
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVE--QVMRGAYQLGALSSSARARRLY 126
Query: 564 EK 565
Sbjct: 127 AS 128
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 38.8 bits (90), Expect = 0.001
Identities = 29/218 (13%), Positives = 55/218 (25%), Gaps = 52/218 (23%)
Query: 396 RLNGYLSELAAA--AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG--T 451
L RGV + + L D DL
Sbjct: 117 LLTNVDLGFCNRVKELAVSRGVTAIQPRQ-----CFGMVLSHEDAF-CAKVPDLPSEFEI 170
Query: 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 510
R + D + + G + L++ S + + G++IA F
Sbjct: 171 RRLRAEDAAMVHDSWPN---KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQNDF-- 225
Query: 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL 570
+ + V P+ +G G L + ++ A
Sbjct: 226 ---SGLGMLQVLPKAERRGLGGLLA-------------------------AAMSREIARG 257
Query: 571 GLDMLFLLT----TRTADWFKSRGFRECS----IEMIP 600
L R+ K G+++ I+++P
Sbjct: 258 EEITLTAWIVATNWRSEALLKRIGYQKDLVNEWIKLVP 295
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Score = 35.9 bits (82), Expect = 0.004
Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 37/125 (29%)
Query: 490 FYVVEREGQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSE 545
F + +++ + K + I V RG G
Sbjct: 55 FVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGI--------------- 99
Query: 546 TRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRT---ADWFKSRGFRECSIEMIPEE 602
L E+ A G + L W++ RG++ ++ M
Sbjct: 100 ----------GSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALIM---- 145
Query: 603 RRKRI 607
K I
Sbjct: 146 -EKPI 149
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 634 | |||
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 100.0 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 100.0 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 100.0 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 100.0 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 100.0 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 100.0 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.93 | |
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.92 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.89 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 99.85 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.84 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 99.78 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 99.71 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 99.66 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 99.66 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 99.66 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 99.66 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.65 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 99.65 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 99.64 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 99.63 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 99.62 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 99.62 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.6 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 99.6 | |
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.6 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 99.6 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 99.6 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 99.6 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 99.59 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 99.58 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 99.57 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 99.54 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 99.54 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 99.54 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 99.53 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 99.53 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 99.52 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.5 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 99.49 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 99.49 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 99.48 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 99.48 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 99.47 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 99.46 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 99.45 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 99.44 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 99.44 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 99.43 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.4 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 99.38 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 99.37 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 99.37 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 99.36 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 99.34 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 99.28 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 99.26 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 99.22 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 99.16 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 99.16 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 99.15 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 99.1 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 99.07 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 99.03 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 99.01 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 98.94 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 98.94 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 98.91 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 98.88 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 98.84 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 98.78 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.52 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 97.82 | |
| d1ylea1 | 338 | Arginine N-succinyltransferase, alpha chain, AstA | 97.14 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 96.86 | |
| d1xmta_ | 95 | Hypothetical protein AT1g77540 {Thale cress (Arabi | 96.62 | |
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 95.1 | |
| d1iyka1 | 165 | N-myristoyl transferase, NMT {Yeast (Candida albic | 90.56 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 90.51 | |
| d1rxta1 | 141 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 90.09 | |
| d1boba_ | 315 | Histone acetyltransferase HAT1 {Baker's yeast (Sac | 89.23 | |
| d1iica1 | 185 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 89.22 | |
| d2d4pa1 | 130 | Hypothetical protein TTHA1254 {Thermus thermophilu | 86.42 | |
| d1iica2 | 237 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 86.28 | |
| d1iyka2 | 227 | N-myristoyl transferase, NMT {Yeast (Candida albic | 84.7 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.1e-55 Score=459.86 Aligned_cols=281 Identities=28% Similarity=0.464 Sum_probs=261.8
Q ss_pred hHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccC
Q 006709 80 DEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLG 158 (634)
Q Consensus 80 ~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~ 158 (634)
..+|+++||+|+|||++||+|+|||||||+++++++ +.++++||+.|+..|.++|||||||||++..++++++++++++
T Consensus 7 ~~~~~~~l~~a~PYi~~~r~ktiVIKlGG~~l~~~~~~~~~~~dIa~L~~~G~~vViVhGgg~~i~~~l~~~gi~~~~~~ 86 (300)
T d2bufa1 7 AAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFID 86 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEEChHHhCChhHHHHHHHHHHHHHHcCCcEEEecChHHHHHHHHHhcccCceecC
Confidence 578999999999999999999999999999999877 6899999999999999999999999999999999999999999
Q ss_pred CccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccc---------cCc
Q 006709 159 RYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGV 228 (634)
Q Consensus 159 G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~---------~g~ 228 (634)
|+|+|+++.|+.+ +++.|++|..++++ |.++|++ ++++++.|+.++.+++..+. +++
T Consensus 87 g~RvT~~~~l~~~~~~~~g~vn~~lv~~---------l~~~g~~----a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~i 153 (300)
T d2bufa1 87 GMRVTDAATMDVVEMVLGGQVNKDIVNL---------INRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEII 153 (300)
T ss_dssp SSBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CC
T ss_pred CcccccchhHHHHHHHHHhHHHHHHHHH---------HHhcCCc----ccccCCCccceEEeecccccccCccccccccc
Confidence 9999999999998 67789999999997 5788987 89999999999998876543 467
Q ss_pred cccccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccccc-CCCCcccccc
Q 006709 229 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFL 307 (634)
Q Consensus 229 d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgl-d~~gklI~~l 307 (634)
|++|+|+|+.+|.+.|+.||+.|.|||++|++++.+|+++|+|+|.+|+++|.+|+||+||||||+||+ +.++++++++
T Consensus 154 d~g~~G~v~~v~~~~i~~ll~~g~Ipvis~~~~~~~G~~~nin~D~~Aa~lA~~L~AdkLI~Ltdv~Gv~~~~g~~~~~l 233 (300)
T d2bufa1 154 DIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGL 233 (300)
T ss_dssp CCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEE
T ss_pred ccCcccceeecchhHHHHHhcCCCeEEecccccCcccchhcccHHHHHHHHHHHcCCCeEEEEcCCCccccCCCcchhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 6789999999
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+.++++++++.+. .
T Consensus 234 ~~~~~~~li~~~~------------------------------------------------------------------i 247 (300)
T d2bufa1 234 STEQVNELIADGT------------------------------------------------------------------I 247 (300)
T ss_dssp CHHHHHHHHHTTC------------------------------------------------------------------S
T ss_pred cHHHHHHHHHcCC------------------------------------------------------------------c
Confidence 9999999886422 2
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 448 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D~Y 448 (634)
+|| |.+||++|..||+.||+||||+||+.+++||.|||+++|+||+|+++.|
T Consensus 248 ~gG---------M~~Kl~aa~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~~~~~ 299 (300)
T d2bufa1 248 YGG---------MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKR 299 (300)
T ss_dssp CTT---------HHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECCCC
T ss_pred Cch---------HHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHcCCCCceeEEecCCC
Confidence 345 9999999999999999999999999999999999999999999999887
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.6e-51 Score=420.41 Aligned_cols=276 Identities=28% Similarity=0.454 Sum_probs=253.7
Q ss_pred HHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCC
Q 006709 81 EQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGR 159 (634)
Q Consensus 81 ~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G 159 (634)
.++|..||||+|||++||+|+||||+||+++++++ ++++++||+.|++.|+++||||||+++++..+.++++++.+..+
T Consensus 3 ~~~~~~~~~~~pyi~~~r~k~iVIKlGgsvi~~~~~~~~l~~dIa~L~~~G~~iVlVhGg~~~~~~~l~~~~i~~~~~~~ 82 (282)
T d2btya1 3 IDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNG 82 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSHHHHSHHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSS
T ss_pred chHHHHHHHHHHHHHHhCCCEEEEEECchHhCChhHHHHHHHHHHHHHHCCCeEEEEECCCccchhhHHHcCCcceeccC
Confidence 57899999999999999999999999999999877 88999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEE
Q 006709 160 YRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK 238 (634)
Q Consensus 160 ~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~ 238 (634)
.|+|+.+.++++ +++++.+|..++.. |+++|++ ++++++.+.....+.. ..+..|++++|+++.
T Consensus 83 ~~~t~~~~~~~~~~~~~~~~n~~~~~~---------l~~~g~~----a~~l~~~~~~~~~~~~--~~~~~d~~~~g~~~~ 147 (282)
T d2btya1 83 HRVTDEKTMEIVEMVLVGKINKEIVMN---------LNLHGGR----AVGICGKDSKLIVAEK--ETKHGDIGYVGKVKK 147 (282)
T ss_dssp SBCBCHHHHHHHHHHHHHTHHHHHHHH---------HHTTTCC----EEEEETTGGGSEEEEE--CCTTCCCBSBEEEEE
T ss_pred ccccchhhHHHHHHHHhchhhHHHHHH---------HHhcCCC----eeeeeccccceeEecc--ccccccccccccccc
Confidence 999999999997 67888999888886 5788887 8899888777666553 346689999999999
Q ss_pred ecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCCCCccccccCHHHHHHHHHh
Q 006709 239 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQ 318 (634)
Q Consensus 239 vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~~gklI~~ls~~e~~~li~~ 318 (634)
+|.+.|+.+|++|.|||++|++++++|+++|+|+|.+|+++|.+|+||+|||+||++|+.+++++|++++..|++.++.+
T Consensus 148 v~~~~i~~lL~~~~ipvi~~~~~~~~g~~~nl~~d~~aa~iA~~l~AdkLI~ltdv~Gl~~d~~~i~~~~~~~~~~~~~~ 227 (282)
T d2btya1 148 VNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRD 227 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTT
T ss_pred cChHHHHHHHhCCCceeecCcccCCcceeeeccccchhHHHhhhcCCceeEEeccccceecCccccccCCHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999998887643
Q ss_pred hchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCccccccccc
Q 006709 319 RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLN 398 (634)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~ 398 (634)
+ ..+||
T Consensus 228 ~------------------------------------------------------------------~~tgG-------- 233 (282)
T d2btya1 228 G------------------------------------------------------------------TVTGG-------- 233 (282)
T ss_dssp T------------------------------------------------------------------CSCTT--------
T ss_pred C------------------------------------------------------------------CcCch--------
Confidence 2 13456
Q ss_pred CCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccccc
Q 006709 399 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 446 (634)
Q Consensus 399 ~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~D 446 (634)
|.+||+||.+||+.||+||||+||+.+++||.|||+++|.||+|..+
T Consensus 234 -M~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~elft~~g~GT~I~~~ 280 (282)
T d2btya1 234 -MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280 (282)
T ss_dssp -HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECCC
T ss_pred -HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhCCCCceEEEEeC
Confidence 99999999999999999999999999999999999999999999765
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.2e-49 Score=409.81 Aligned_cols=279 Identities=28% Similarity=0.383 Sum_probs=249.8
Q ss_pred CcchHHHHHHHHHhhhHHHhhcCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCccc
Q 006709 77 PVEDEQFVKWFREAWPYLWAHRGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAK 155 (634)
Q Consensus 77 ~~~~~~~v~~~r~a~pYi~~~r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~ 155 (634)
+.+..-++++||||+|||++||+|+||||+||+++++++ ++++++||+.|++.|+++||||||+++++..+..++++++
T Consensus 3 ~~~~~~~~~~l~~a~pYi~~~r~ktiVIKlGGsvl~~~~~~~~l~~dia~L~~~G~~vVlVhGg~~~i~~~l~~~~~~~~ 82 (291)
T d2ap9a1 3 ALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGD 82 (291)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCC
T ss_pred CCChhhHHHHHHHHhHHHHHhCCCEEEEEECcHHhcCHHHHHHHHHHHHHHHHCCCEEEEEeCCccccchhHHHcCCCcc
Confidence 345677999999999999999999999999999999877 7899999999999999999999999999999999999999
Q ss_pred ccCCccCCCHHHHHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeeccc---ccCcccc
Q 006709 156 YLGRYRITDSESLAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYG 231 (634)
Q Consensus 156 ~~~G~RvT~~~~l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~---~~g~d~g 231 (634)
+.++.|+|+.++++.+ ++..+..+..+.+. +..+|+. ++++.+.+.++..+.+... .++.|++
T Consensus 83 ~~~~~r~t~~~~~~~v~~~~~~~~~~~~~~~---------~~~~g~~----~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (291)
T d2ap9a1 83 FKGGFRVTTPEVLDVARMVLFGQVGRELVNL---------INAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIG 149 (291)
T ss_dssp CSSSSCCBCHHHHHHHHHHHHHTHHHHHHHH---------HTTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCB
T ss_pred cccccccCcHHHHHHHHHhhhhHHHHHHHHH---------HHhcCCc----cccchhhhcccccccccccccccccccce
Confidence 9999999999999987 66777778888776 4567776 7889999999888766532 3567899
Q ss_pred ccceEEEecHHHHHHHHcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccCC----CCcccccc
Q 006709 232 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFL 307 (634)
Q Consensus 232 ~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld~----~gklI~~l 307 (634)
++|.++.+|.+.|+.+|++|.|||++|++++.+|+.+|+|+|.+|+++|.+|+||+||||||+||+.. ...+++++
T Consensus 150 ~~G~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~n~d~D~lAa~lA~~l~AdkLI~LTdv~Gv~~~~~~~~~~~~~~ 229 (291)
T d2ap9a1 150 LVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229 (291)
T ss_dssp SEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEE
T ss_pred eecccccchHHHHHHHHhcCCCcccCccccCCccccccccHHHHHHHHHHhcCCcEEEEeeccCcccccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999732 35677888
Q ss_pred CHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccc
Q 006709 308 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 387 (634)
Q Consensus 308 s~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~ 387 (634)
+..+++++++. .
T Consensus 230 ~~~~~~~~~~~--------------------------------------------------------------------~ 241 (291)
T d2ap9a1 230 DTGTLAQLLPT--------------------------------------------------------------------L 241 (291)
T ss_dssp EHHHHHHHGGG--------------------------------------------------------------------S
T ss_pred CHHHHHHHHhh--------------------------------------------------------------------h
Confidence 88888776531 1
Q ss_pred cCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 388 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 388 ~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
+|| |.+||+||.+||+.||+||||+||+.+++||.|||+++|+||+|.+
T Consensus 242 ~gG---------M~~Kl~aA~~a~~~Gv~rv~Ii~g~~~~~ll~eLft~~g~GT~I~r 290 (291)
T d2ap9a1 242 ELG---------MVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVR 290 (291)
T ss_dssp CTT---------THHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEEC
T ss_pred hCc---------hHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCceEEec
Confidence 244 9999999999999999999999999999999999999999999864
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=2.5e-36 Score=314.45 Aligned_cols=259 Identities=16% Similarity=0.115 Sum_probs=203.3
Q ss_pred CCeEEEEECCccCCCCC-----------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHH
Q 006709 99 GGTFVVIISGEIVSSPY-----------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSES 167 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~-----------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~ 167 (634)
||+||||+|||+|+++. +++++++|+.|++.|+++|||||||||++..+.++++++.+..+.|+|+...
T Consensus 1 ~KrIVIKiGgs~l~~~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vVlVhGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~ 80 (313)
T d1e19a_ 1 GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVA 80 (313)
T ss_dssp CCEEEEECCGGGTCCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred CCEEEEEeChHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCCccccCCCcccccHHH
Confidence 79999999999999863 4678999999999999999999999999999999999999999999999998
Q ss_pred HHHH-HHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcce----eEEe-----eccCCceeeeeec------------cc-
Q 006709 168 LAAA-MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWH----EVGV-----SVASGNFLAAKRK------------GV- 224 (634)
Q Consensus 168 l~~~-~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~----av~l-----~~~dg~~l~ak~~------------g~- 224 (634)
+..+ +...+.+++.+.+. +.+++++.... +..+ ...++.+..+... +.
T Consensus 81 ~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 151 (313)
T d1e19a_ 81 GAMSQGWIGYMIQQALKNE---------LRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWI 151 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHhccccHHhhHHHHhhhhhhHHHHhhccCceeehhhhhhHHHHHHhhcCce
Confidence 8876 56666777777665 35555553221 1222 2233333333221 00
Q ss_pred -------ccCccccccceEEEecHHHHHHHHcCCcEEEEcCCccC--------CCCceeeechHHHHHHHHHHcCCCEEE
Q 006709 225 -------VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYS--------SSGEVLNCNTYEVATACALAIEADKLI 289 (634)
Q Consensus 225 -------~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v~~~--------~~Gei~nid~D~lAa~LA~aL~AdkLI 289 (634)
....+.+.++.++.++.+.|..++++|.+|++++.++. .+|+++|+|+|.+|+++|.+++||+||
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~v~~~~i~~~~~~~~i~vl~~~~~~~v~~~~~~~~G~~~ninaD~lAa~vA~~l~Ad~LI 231 (313)
T d1e19a_ 152 VKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFM 231 (313)
T ss_dssp EEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEE
T ss_pred eeeccCccceeeccCCCceeEecccceeeccccchhhhhccCCCCCccccCCCcCceEEecchhHHHHHHHHHHHHHHHH
Confidence 01122345667888999999999999999999876543 368999999999999999999999999
Q ss_pred Eeeccccc-----CCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchh
Q 006709 290 CIIDGPIL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRI 364 (634)
Q Consensus 290 ~LTDVdgl-----d~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (634)
|||||||+ ++++++|++++.+|++++++.+.
T Consensus 232 lLTdv~Gv~~~~~~~~~~~i~~l~~~e~~~li~~g~-------------------------------------------- 267 (313)
T d1e19a_ 232 ILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH-------------------------------------------- 267 (313)
T ss_dssp EEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC--------------------------------------------
T ss_pred hccCCcceeccCCCcccceeeeCCHHHHHHHhhCCC--------------------------------------------
Confidence 99999997 35689999999999999875321
Q ss_pred ccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 365 ATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 365 ~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
|.+|| |.+||+||..|++.|+++|+|.+ ++. +.+++.+ +.||+|.
T Consensus 268 ---------------------~~~GG---------M~~Kv~aA~~a~~~Gv~~v~I~~---~~~-i~~~l~g-~~GT~i~ 312 (313)
T d1e19a_ 268 ---------------------FKAGS---------MGPKVLAAIRFIEWGGERAIIAH---LEK-AVEALEG-KTGTQVL 312 (313)
T ss_dssp ---------------------SCTTT---------HHHHHHHHHHHHHHTCSEEEEEE---GGG-HHHHHTT-SSSEEEE
T ss_pred ---------------------cccCC---------hHHHHHHHHHHHHhCCCEEEECC---hHH-HHHHHCC-CCCCEEc
Confidence 34567 99999999999999999999965 333 5677765 5899986
Q ss_pred c
Q 006709 445 S 445 (634)
Q Consensus 445 ~ 445 (634)
|
T Consensus 313 P 313 (313)
T d1e19a_ 313 P 313 (313)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Probab=100.00 E-value=8.3e-35 Score=301.15 Aligned_cols=259 Identities=15% Similarity=0.121 Sum_probs=190.5
Q ss_pred CCeEEEEECCccCCCCC---------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY---------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~---------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
|||||||+|||+|++++ +++++++|+.|++.|+++|||||||||++..+.+++..+.+..+.|.++...+.
T Consensus 1 gk~iVIK~GGsal~~~~~~~~~~~~~l~~~~~~Ia~L~~~G~~vViVHGGgpqi~~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (307)
T d1b7ba_ 1 GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAM 80 (307)
T ss_dssp CCEEEEEECHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHH
T ss_pred CCEEEEEEChhhhCCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcCCCCcccccccccchHHHH
Confidence 79999999999998764 678999999999999999999999999988888777766666655555555554
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCC--------------------cceeEEeeccCCceeeeeeccc-----
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSS--------------------RWHEVGVSVASGNFLAAKRKGV----- 224 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~--------------------~~~av~l~~~dg~~l~ak~~g~----- 224 (634)
......+.+...+.... .....+. ...++++.+.+.........+.
T Consensus 81 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (307)
T d1b7ba_ 81 TQGSIGYWLSNALNQEL---------NKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKED 151 (307)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHTTCCCEEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhhhhHHHH---------hhcccchhhhhhhhhhhHHHHHHHHHccCcceeeecccchHHHHHHhhcceecc
Confidence 44333333332222221 1111111 0113444443333222211110
Q ss_pred ---ccCccccccceEEEecHHHHHHHHcCCcEEEEcCC------ccCCCCceeeechHHHHHHHHHHcCCCEEEEeeccc
Q 006709 225 ---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 295 (634)
Q Consensus 225 ---~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPVv~~v------~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVd 295 (634)
....+.++.+.++.++.+.+..+++.+.||+++++ +.+.+|+++|+|+|++|+++|.+|+||+||||||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~ninaD~lAa~iA~~l~Ad~Li~lTdv~ 231 (307)
T d1b7ba_ 152 AGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVD 231 (307)
T ss_dssp TTTEEEEEECCCCEEEETTHHHHHHHHHTTEEEECSGGGCEEEETTTTEECSCCCCHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred ccccceeecCcCceeeeechhhhhhhhhcCceeeccCCccccccccCCCCcEEecchhHHHHHHHHHhhhhheeeccccC
Confidence 11123345667788899999999999999998754 456689999999999999999999999999999999
Q ss_pred cc-----CCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCC
Q 006709 296 IL-----DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 370 (634)
Q Consensus 296 gl-----d~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (634)
|+ ++++++++.++.+|++++++.+.
T Consensus 232 Gv~~~~~~~~~~~i~~l~~~e~~~l~~~g~-------------------------------------------------- 261 (307)
T d1b7ba_ 232 YVCINYGKPDEKQLTNVTVAELEEYKQAGH-------------------------------------------------- 261 (307)
T ss_dssp SCEETTTSTTCEECSEEEHHHHHHHHHTTC--------------------------------------------------
T ss_pred ceeeCCCcccccccccCCHHHHHHHHHCCC--------------------------------------------------
Confidence 97 24578899999999999875421
Q ss_pred cccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 371 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 371 ~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|.+|| |.|||+||..|+++|++++||+++. ..|.|+|+++++||+|
T Consensus 262 ---------------~~~GG---------M~pKl~aA~~al~~Gv~~~~ii~~~---~~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 262 ---------------FAPGS---------MLPKIEAAIQFVESQPNKQAIITSL---ENLGSMSGDEIVGTVV 307 (307)
T ss_dssp ---------------SCTTT---------HHHHHHHHHHHHTTSTTCEEEEECH---HHHTTCSSCSCEEECC
T ss_pred ---------------cccCC---------hHHHHHHHHHHHHcCCCeEEEECCH---HHHHHHHcCCCCCCCC
Confidence 34567 9999999999999999999999752 2478999999999986
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.7e-33 Score=276.27 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=215.5
Q ss_pred cCCeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCe-EEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHH-HHH
Q 006709 98 RGGTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIR-FVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAA-MEA 174 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~k-vVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~-~~a 174 (634)
.+++||||+||++|++++ +++++++|+.|++.|++ +|||||+|+|++.+++++++++++..+.++++..++..+ ++.
T Consensus 1 Mm~~IVIKiGgs~lt~~~~~~~~~~~ia~l~~~g~~~vvvvhG~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1gs5a_ 1 MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGAL 80 (258)
T ss_dssp CCCCEEEEECGGGGGCHHHHHHHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHH
T ss_pred CCCCEEEEECchhccCHHHHHHHHHHHHHHHHCCCceEEEECCCchhhhcchhhhccccccccccchhhHHHHHHHHHHH
Confidence 368999999999999977 89999999999999987 899999999999999999999999999999999999886 667
Q ss_pred HhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEE
Q 006709 175 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 254 (634)
Q Consensus 175 ~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IP 254 (634)
.+.++..++.. +...|.+ +..+...+.++..... ...++.+.+++..++...+..+++.+.+|
T Consensus 81 ~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 143 (258)
T d1gs5a_ 81 AGTANKTLLAW---------AKKHQIA----AVGLFLGDGDSVKVTQ----LDEELGHVGLAQPGSPKLINSLLENGYLP 143 (258)
T ss_dssp HTHHHHHHHHH---------HHHTTCC----EEEECTTGGGCEEEEE----CCGGGBSBEEEEECCCHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHH---------HhccCcc----cccccccccccccccc----ccccccccccccccccchHHHHHhccccc
Confidence 88888777775 4667776 5666666665555433 23577888999999999999999999999
Q ss_pred EEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccc-cCCCCccccccCHHHHHHHHHhhchhhhhHHHHHHhh
Q 006709 255 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPI-LDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAV 333 (634)
Q Consensus 255 Vv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdg-ld~~gklI~~ls~~e~~~li~~~~~~~~~~~~~~~~~ 333 (634)
++.+++.+++++++++++|.+++.+|..++|++++ +||+++ ++.+...++.++..+...+...
T Consensus 144 v~~~~~~~~~~~~~~~~~~~~a~~~a~~l~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 207 (258)
T d1gs5a_ 144 VVSSIGVTDEGQLMNVNADQAATALAATLGADLIL-LSDVSGILDGKGQRIAEMTAAKAEQLIEQ--------------- 207 (258)
T ss_dssp EECSEEECTTSCEEECCHHHHHHHHHHHHTCEEEE-EESSSSCBCTTSCBCCEECHHHHHHHHHT---------------
T ss_pred cccccccccCCcEEEechhhhhhhHHHHHHhhhhh-hcccccccccccccccccchHHHHHHHhC---------------
Confidence 99999999999999999999999999999999765 566665 5677788888887776655321
Q ss_pred hhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHHHHHHc
Q 006709 334 AEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 413 (634)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~~a~~~ 413 (634)
++.+|| |.+||+||..|++.
T Consensus 208 ---------------------------------------------------~~~tGG---------M~~Kl~aA~~a~~~ 227 (258)
T d1gs5a_ 208 ---------------------------------------------------GIITDG---------MIVKVNAALDAART 227 (258)
T ss_dssp ---------------------------------------------------TCSCTH---------HHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------Ccccch---------HHHHHHHHHHHHHc
Confidence 134677 99999999999999
Q ss_pred CCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 414 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 414 Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
||++|||+||+.++ +|.++|++++.||+|.+
T Consensus 228 Gv~~v~I~~g~~~~-~L~~l~~g~~~GT~i~a 258 (258)
T d1gs5a_ 228 LGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258 (258)
T ss_dssp HTSCEEEEESSCGG-GHHHHHTTCCSSEEECC
T ss_pred CCCEEEEEeCCCch-HHHHHhcCCCCceEEeC
Confidence 99999999999877 57899999999999853
|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Glutamate 5-kinase species: Campylobacter jejuni [TaxId: 197]
Probab=99.93 E-value=1.6e-25 Score=225.13 Aligned_cols=233 Identities=16% Similarity=0.137 Sum_probs=162.4
Q ss_pred CeEEEEECCccCCCCC------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHH
Q 006709 100 GTFVVIISGEIVSSPY------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAME 173 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~ 173 (634)
|+||||+||++|++++ +++++++|+.|++ ++++||||||+ +......+++... .....+++ +
T Consensus 1 krIViKlGGs~it~k~~~~~~~l~~~~~~I~~l~~-~~~~vIV~gGa--~~~G~~~~~~~~~--------~~~~~~~~-~ 68 (250)
T d2akoa1 1 KRIVVKVGSHVISEENTLSFERLKNLVAFLAKLME-KYEVILVTSAA--ISAGHTKLDIDRK--------NLINKQVL-A 68 (250)
T ss_dssp CEEEEEECHHHHBCSSSBCHHHHHHHHHHHHHHHH-HSEEEEEECCH--HHHHHHHCCCCSS--------SHHHHHHH-H
T ss_pred CEEEEEeccCeeeCCCCcCHHHHHHHHHHHHHHHc-CCeEEEEEcCc--ccccccccccccc--------hhhhhhhh-h
Confidence 6899999999999865 5789999999986 88999998885 3334466666532 22222332 2
Q ss_pred HHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcE
Q 006709 174 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 253 (634)
Q Consensus 174 a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~I 253 (634)
+.|+.. +...+. ..|..+|.. ++........+.. ........+.+..+++.+.+
T Consensus 69 ~~g~~~--~~~~~~-----~~l~~~~~~----~~~~l~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~i 122 (250)
T d2akoa1 69 AIGQPF--LISVYN-----ELLAKFNKL----GGQILLTGKDFDS---------------RKATKHAKNAIDMMINLGIL 122 (250)
T ss_dssp HHHHHH--HHHHHH-----HHHGGGTCC----EEEEEECTGGGGC---------------HHHHHHHHHHHHHHHHTTCE
T ss_pred cccchh--HHHHHH-----HHhhhcccc----cccccccccchhh---------------hhhhhhhhHHHHHHHHhCcc
Confidence 334332 222211 147788876 4443333322221 11122345789999999999
Q ss_pred EEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHH--HHHHHHHhhchhhh
Q 006709 254 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ--EADSLIRQRVKQSE 324 (634)
Q Consensus 254 PVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~--e~~~li~~~~~~~~ 324 (634)
||+++......++..++++|.+|+++|..++|++|+++|||||++ +++++|++++.. +...+..
T Consensus 123 pv~~~~~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~It~~~~~~~~~~~------- 195 (250)
T d2akoa1 123 PIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATI------- 195 (250)
T ss_dssp EEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC-----------
T ss_pred cccccCccccccccccccchhhHHHHHHhcccceeeeccCCCceeeCCCcccccccchhhccccchHHhhhhc-------
Confidence 999988777777888999999999999999999999999999972 468999999842 1111110
Q ss_pred hHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHH
Q 006709 325 IAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSEL 404 (634)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl 404 (634)
..++. ++||| |.+||
T Consensus 196 -------------------------------------------~~~s~-------------~~tGG---------M~~Kl 210 (250)
T d2akoa1 196 -------------------------------------------KTGSE-------------HGTGG---------IVTKL 210 (250)
T ss_dssp -------------------------------------------------------------CBSCH---------HHHHH
T ss_pred -------------------------------------------ccCCC-------------CCCCc---------hHHHH
Confidence 01111 34677 99999
Q ss_pred HHHHHHHHcCCceEEEccCCcchhHHHHHHhhc-CCcccc
Q 006709 405 AAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD-GMGTMV 443 (634)
Q Consensus 405 ~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~-g~GT~I 443 (634)
+||..+.+.|++ |+|+||+.++.|...+.+++ ..||.|
T Consensus 211 ~aa~~~~~~gi~-v~I~nG~~~~~l~~~l~~~~~~~GTv~ 249 (250)
T d2akoa1 211 KAAKFLLEHNKK-MFLASGFDLSVAKTFLLEDKQIGGTLF 249 (250)
T ss_dssp HHHHHHHHTTCE-EEEEESSSCHHHHHHHHSCCCCSSEEE
T ss_pred HHHHHHHHCCCC-EEEecCCCccHHHHHHhCCCCCCceEe
Confidence 999999999995 99999999998766665553 469987
|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.92 E-value=1e-24 Score=216.19 Aligned_cols=212 Identities=14% Similarity=0.123 Sum_probs=152.0
Q ss_pred eEEEEECCccCCCCC-----hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY-----LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESLAAAMEAA 175 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-----l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l~~~~~a~ 175 (634)
+||||+||++|++++ +++++++|+.+.+ +.++|||||||.+.+...+..... + ......+......
T Consensus 2 rIViKiGGs~l~~~~~~~~~i~~l~~~I~~l~~-~~~~viV~ggG~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~ 72 (225)
T d2brxa1 2 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKF-----N---SSETFKDFIGIQI 72 (225)
T ss_dssp EEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTT-----T---CCHHHHHHHHHHH
T ss_pred eEEEEeehhhcCCCCCCHHHHHHHHHHHHHHHc-CCcEEEEECccHHHHHHHHhhhhc-----c---hhhHHHHHhhhhH
Confidence 689999999998765 6888999998876 789999999998876654322110 0 1222233333344
Q ss_pred hHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 176 G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
..+|..+... .|...|++. .. -+.....++++.+.|||
T Consensus 73 ~~~~~~~~~~--------~l~~~~~~~---------------~~-------------------~~~~~~~~~l~~~~ipv 110 (225)
T d2brxa1 73 TRANAMLLIA--------ALREKAYPV---------------VV-------------------EDFWEAWKAVQLKKIPV 110 (225)
T ss_dssp HHHHHHHHHH--------HHGGGBCSS---------------CB-------------------CSHHHHHHHHHTTCBCE
T ss_pred HHHHHHHHHH--------HHHhhhccc---------------cc-------------------ccHHHHHHHHHhccccc
Confidence 4555544443 356666541 00 12334456789999999
Q ss_pred EcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHHH
Q 006709 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (634)
Q Consensus 256 v~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~~~~ 328 (634)
++.... +.++|.+|+.+|..|+||+|+|+|||||++ +++++|++++.+|+.++...+.
T Consensus 111 ~~~~~~-------~~~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e~~~~~~~~~-------- 175 (225)
T d2brxa1 111 MGGTHP-------GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGI-------- 175 (225)
T ss_dssp ECCCST-------TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC----------
T ss_pred ccCCCC-------CcchhHHHHHHHHHhCchhhhhhhhhhhhhhcccccccccccceEEecchHHHHhccCc--------
Confidence 987542 346899999999999999999999999982 5789999999998887764322
Q ss_pred HHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHH
Q 006709 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (634)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~ 408 (634)
+. +.+|| |.+|+ ||.
T Consensus 176 ------------------------------------------~~-------------~g~gg---------~~~k~-Aa~ 190 (225)
T d2brxa1 176 ------------------------------------------EK-------------AGSSS---------VIDPL-AAK 190 (225)
T ss_dssp -------------------------------------------------------------C---------CSCHH-HHH
T ss_pred ------------------------------------------cc-------------cCCCC---------cccHH-HHH
Confidence 00 12455 99998 788
Q ss_pred HHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 409 ~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
.|.++|++ ++|+||..++. |.+++.++..||+|.|
T Consensus 191 ~a~~~gi~-v~I~ng~~~~~-l~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 191 IIARSGIK-TIVIGKEDAKD-LFRVIKGDHNGTTIEP 225 (225)
T ss_dssp HHHHHTCC-EEEECHHHHTC-HHHHHTTCSSSEEECC
T ss_pred HHHHCCCc-EEEEeCCCcch-HHHHHCCCCCCcEecC
Confidence 89999997 99999999997 5588899999999865
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=1.3e-22 Score=199.90 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=145.8
Q ss_pred eEEEEECCccCCCCC--hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHH---HcCCcccccCCccCCCHHHHHHHHHHH
Q 006709 101 TFVVIISGEIVSSPY--LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS---ERGHEAKYLGRYRITDSESLAAAMEAA 175 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~--l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~---~lg~~~~~~~G~RvT~~~~l~~~~~a~ 175 (634)
+||||+|||+|+++. +.+++++|+.+++.+ ++|||||||.+++...+ .++. +....+......
T Consensus 2 rIViKiGgs~l~~~~~~i~~la~~i~~l~~~~-~~vIVvsgG~~ar~~~~~~~~~~~-----------~~~~~~~~~~~~ 69 (219)
T d2ij9a1 2 KVVLSLGGSVLSNESEKIREFAKTIESVAQQN-QVFVVVGGGKLAREYIKSARELGA-----------SETFCDYIGIAA 69 (219)
T ss_dssp EEEEEECSSTTTTCHHHHHHHHHHHHHHHHHS-EEEEEECCHHHHHHHHHHHHHTTC-----------CHHHHHHHHHHH
T ss_pred EEEEEecccccCCcHHHHHHHHHHHHHHHcCC-cEEEEECCCccccchhhhhhhcCc-----------cHHHHHHHHHHH
Confidence 689999999998754 899999999998755 89999999987654432 2222 223333332233
Q ss_pred hHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHcCCcEEE
Q 006709 176 GGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVI 255 (634)
Q Consensus 176 G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd~G~IPV 255 (634)
..+|..+... .|...+.. ...+....+.+++.+.+||
T Consensus 70 ~~~~~~~~~~--------~l~~~~~~-----------------------------------~~~~~~~~~~l~~~~~v~v 106 (219)
T d2ij9a1 70 TRLNAMLLIS--------AIPSAAKK-----------------------------------VPVDFMEAEELSKLYRVVV 106 (219)
T ss_dssp HHHHHHHHHH--------HCTTBCSS-----------------------------------CCSSHHHHHHHHTTCSEEE
T ss_pred HHhhHHHHHH--------Hhhhccch-----------------------------------hhHHHHHHHHHhccCCceE
Confidence 3334333222 12333322 1124456778999999998
Q ss_pred EcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchhhhhHHH
Q 006709 256 LSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAAN 328 (634)
Q Consensus 256 v~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~~~~~~~ 328 (634)
+.. +.-+.++|.+|+.+|..++||+|+++|||||++ +++++|++++.+|+.++...+.
T Consensus 107 ~~~-------~~~~~stD~laa~vA~~l~Ad~liilTDVDGvYt~dP~~~~~A~~i~~is~~e~~~~~~~~~-------- 171 (219)
T d2ij9a1 107 MGG-------TFPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSS-------- 171 (219)
T ss_dssp ECC-------CSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC----------
T ss_pred ECC-------CCCCCcccHHHHHHHHHcCchHhhhccCcccccccccccCcccccccccCHHHHHHHhhccC--------
Confidence 764 233467899999999999999999999999983 5689999999987766532111
Q ss_pred HHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHHHHHHHH
Q 006709 329 YVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAA 408 (634)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~Kl~AA~ 408 (634)
. ...|| |.+|++||.
T Consensus 172 -------------------------------------------~-------------~~~gg---------~~~k~~Aa~ 186 (219)
T d2ij9a1 172 -------------------------------------------A-------------KAGTN---------VVIDLLAAK 186 (219)
T ss_dssp -----------------------------------------------------------CCC---------CCSCHHHHH
T ss_pred -------------------------------------------c-------------cCCCC---------CcchHHHHH
Confidence 0 11244 889999999
Q ss_pred HHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 409 FVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 409 ~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
.|.+.|++ ++|++|+ ++. +.+++.++..||.|+
T Consensus 187 ~a~~~gi~-~~I~~g~-~~n-i~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 187 IIERSKIK-TYVILGT-PEN-IMKAVKGEAVGTVIA 219 (219)
T ss_dssp HHHHHTCC-EEEEECC-HHH-HHHHHTTCCCSEEEC
T ss_pred HHHHcCCc-EEEecCC-CcH-HHHHHCCCCCceEeC
Confidence 99999997 8999996 666 567888999999874
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Neisseria meningitidis [TaxId: 487]
Probab=99.85 E-value=7.5e-20 Score=180.05 Aligned_cols=219 Identities=15% Similarity=0.095 Sum_probs=148.1
Q ss_pred hcCCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccccCCccCCCHHHH
Q 006709 97 HRGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 97 ~r~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~~~G~RvT~~~~l 168 (634)
++.|+|||||||++|++++ +.+++++|+.|++.|++||+|+||+............. .....
T Consensus 2 mk~krIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vviVssG~~~~~~~~~~~~~~----------~~~~~ 71 (236)
T d1ybda1 2 IKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSM----------DRATA 71 (236)
T ss_dssp CSCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTS----------CHHHH
T ss_pred CCCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccccccccccc----------ccchh
Confidence 3458999999999997643 78999999999999999999999987766544333221 12222
Q ss_pred HHHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHH
Q 006709 169 AAAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL 248 (634)
Q Consensus 169 ~~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LL 248 (634)
........+....+... .+...+.. +........ . ..........+...+
T Consensus 72 ~~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~---~---------------~~~~~~~~~~~~~~~ 121 (236)
T d1ybda1 72 DYMGMMATVMNALALKD--------AFETLGIK----ARVQSALSM---Q---------------QIAETYARPKAIQYL 121 (236)
T ss_dssp HHHHHHHHHHHHHHHHH--------HHHHTTCC----EEEEESSCB---S---------------SSCEECCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH--------HHHhcCcc----hhhhhhhhh---h---------------hhhhhHHHHHHHhhh
Confidence 22222222222222222 23344433 222211110 0 011234566777788
Q ss_pred cCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhch
Q 006709 249 DGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVK 321 (634)
Q Consensus 249 d~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~ 321 (634)
+.+.+|++.... +..+.|+|.+|+.+|..++||.|+++|||||++ +++++++.++.+|... .+
T Consensus 122 ~~~~~~~~~~~~-----~~~~gdnD~laa~vA~~~~ad~liilTdVdGvy~~dP~~~~~a~~~~~~~~~e~~~---~g-- 191 (236)
T d1ybda1 122 EEGKVVIFAAGT-----GNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALL---KN-- 191 (236)
T ss_dssp HTTCEEEEESTT-----SSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHH---TT--
T ss_pred ccCceecccccc-----ccccccchHHHHHHHHHhCccceeeccCccchhhccccccccceeeccccHHHHHh---cC--
Confidence 899888875432 446789999999999999999999999999972 5688888888664321 00
Q ss_pred hhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCH
Q 006709 322 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 401 (634)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~ 401 (634)
+|| |.
T Consensus 192 ------------------------------------------------------------------~~~---------m~ 196 (236)
T d1ybda1 192 ------------------------------------------------------------------LKV---------MD 196 (236)
T ss_dssp ------------------------------------------------------------------CCS---------SC
T ss_pred ------------------------------------------------------------------chH---------HH
Confidence 123 74
Q ss_pred HHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCccccc
Q 006709 402 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 444 (634)
Q Consensus 402 ~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~ 444 (634)
+ .||..|.++|++ ++|+||+.++. |..++.++..||.|.
T Consensus 197 ~--~Aa~~a~~~gi~-v~I~ng~~~~~-i~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 197 A--TAFALCRERKLN-IVVFGIAKEGS-LKRVITGEDEGTLVH 235 (236)
T ss_dssp H--HHHHHHHHTTCC-EEEECTTSTTH-HHHHHHTCSCSEEEE
T ss_pred H--HHHHHHHHCCCc-EEEEeCCCccH-HHHHHcCCCCCcEeC
Confidence 4 489999999997 99999999997 667788889999873
|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Probab=99.84 E-value=7.3e-20 Score=180.91 Aligned_cols=215 Identities=17% Similarity=0.114 Sum_probs=143.8
Q ss_pred CCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHH-HHHHHcCCcccccCCccCCCHHHHH
Q 006709 99 GGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQID-KLLSERGHEAKYLGRYRITDSESLA 169 (634)
Q Consensus 99 ~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~-~~l~~lg~~~~~~~G~RvT~~~~l~ 169 (634)
.|+||||+||++|++++ +++++++|+.|++.|+++++|.||+.... ..+...+.+ .....
T Consensus 5 ~kRIViKiGgs~l~~~~~~~i~~~~i~~la~~I~~l~~~g~~vivVssg~~~~~~~~l~~~~~~-----------~~~~~ 73 (236)
T d2a1fa1 5 YKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMN-----------RVVGD 73 (236)
T ss_dssp CSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCC-----------HHHHH
T ss_pred CcEEEEEEccceecCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecccccchhhhhhhcCCC-----------chhhH
Confidence 48999999999998643 78999999999999999999999865433 223332221 11111
Q ss_pred HHHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHHHc
Q 006709 170 AAMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLD 249 (634)
Q Consensus 170 ~~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~LLd 249 (634)
.........+..+.... +...... ........ ............+..+++
T Consensus 74 ~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 123 (236)
T d2a1fa1 74 HMGMLATVMNGLAMRDS--------LFRADVN----AKLMSAFQ------------------LNGICDTYNWSEAIKMLR 123 (236)
T ss_dssp HHHHHHHHHHHHHHHHH--------HHHTTCC----EEEEESSC------------------CTTTSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH--------HHhhccc----cchhhhhh------------------hhhhHHHhhhhhhhhhhh
Confidence 11111122222222221 1222221 11111110 011123445667777888
Q ss_pred CCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhchh
Q 006709 250 GGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQ 322 (634)
Q Consensus 250 ~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~~~ 322 (634)
.+.+|++.... ++.+.|+|.+|+.+|.+++||.|+++|||||++ ++++++++++.+|+.+ .
T Consensus 124 ~~~~~~~~~~~-----~~~~~dnD~laa~vA~~~~Ad~lii~TDVdGvyt~dP~~~~~A~~i~~i~~~e~l~---~---- 191 (236)
T d2a1fa1 124 EKRVVIFSAGT-----GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVID---K---- 191 (236)
T ss_dssp TTCEEEEESTT-----SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHH---T----
T ss_pred hcccccccccc-----cCCCCCCcHHHHHHHHHhchhHHHHhhcccccccccccccccccccccccHHHHHh---c----
Confidence 99998876543 445679999999999999999999999999983 4688899888765321 0
Q ss_pred hhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCCHH
Q 006709 323 SEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLS 402 (634)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m~~ 402 (634)
|+ |..
T Consensus 192 ------------------------------------------------------------------G~---------~v~ 196 (236)
T d2a1fa1 192 ------------------------------------------------------------------EL---------KVM 196 (236)
T ss_dssp ------------------------------------------------------------------TC---------CSS
T ss_pred ------------------------------------------------------------------CC---------cee
Confidence 12 666
Q ss_pred HHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccc
Q 006709 403 ELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 443 (634)
Q Consensus 403 Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I 443 (634)
|+.||..|.++|++ ++|+||..++. |.++++++..||.|
T Consensus 197 k~~Aa~~a~~~gi~-v~I~ng~~~~~-l~~~l~Ge~~GTlI 235 (236)
T d2a1fa1 197 DLSAFTLARDHGMP-IRVFNMGKPGA-LRQVVTGTEEGTTI 235 (236)
T ss_dssp CHHHHHHHHHHTCC-EEEEETTSTTH-HHHHHTCSCSSEEE
T ss_pred HHHHHHHHHHCCCe-EEEEeCCCCcH-HHHHHcCCCCccee
Confidence 89999999999996 99999999997 66788999999987
|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Streptococcus pyogenes [TaxId: 1314]
Probab=99.78 E-value=2.7e-18 Score=167.82 Aligned_cols=218 Identities=15% Similarity=0.109 Sum_probs=140.1
Q ss_pred cCCeEEEEECCccCCCCC--------hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHH-HcCCcccccCCccCCCHHHH
Q 006709 98 RGGTFVVIISGEIVSSPY--------LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLS-ERGHEAKYLGRYRITDSESL 168 (634)
Q Consensus 98 r~k~iVIKLGGsvL~~~~--------l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~-~lg~~~~~~~G~RvT~~~~l 168 (634)
++|+||||||||+|++++ +++++++|+.|++.|++||+|+||+........ ..+. .....
T Consensus 3 k~krIViKiGgs~lt~~~~~~l~~~~l~~ia~~I~~l~~~g~~Vv~v~~g~~~~~~~~~~~~~~-----------~~~~~ 71 (238)
T d1z9da1 3 KYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGM-----------DRVQA 71 (238)
T ss_dssp SCSEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTC-----------CHHHH
T ss_pred CCCEEEEEECcceecCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecccccccceeccccCC-----------cchhH
Confidence 468999999999998653 789999999999999999999999865443321 1111 11111
Q ss_pred HH-HHHHHhHHHHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEEEecHHHHHHH
Q 006709 169 AA-AMEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRER 247 (634)
Q Consensus 169 ~~-~~~a~G~in~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd~~~I~~L 247 (634)
.. ...+..+.. .+... .+..+|+. ............. ........+...
T Consensus 72 ~~~~~~~~~~~~-~~~~~--------~~~~~~i~----~~~~~~~~~~~~~-----------------~~~~~~~~i~~~ 121 (238)
T d1z9da1 72 DYTGMLGTVMNA-LVMAD--------SLQHYGVD----TRVQTAIPMQNVA-----------------EPYIRGRALRHL 121 (238)
T ss_dssp HHHHHHHHHHHH-HHHHH--------HHHTTTCC----EEEEESSCBTTTB-----------------EECCHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHH--------HHhhCCcc----chhhhhhhhHHHH-----------------hhhhHHHHHhhh
Confidence 11 222222222 22222 35667765 2222222111110 011223455544
Q ss_pred HcCCcEEEEcCCccCCCCceeeechHHHHHHHHHHcCCCEEEEeecccccC-------CCCccccccCHHHHHHHHHhhc
Q 006709 248 LDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 248 Ld~G~IPVv~~v~~~~~Gei~nid~D~lAa~LA~aL~AdkLI~LTDVdgld-------~~gklI~~ls~~e~~~li~~~~ 320 (634)
...+.++.... .+.....|+|.+++.+|..++||.++++|||||++ +++++++.++..|...
T Consensus 122 ~~~~~~~~~~~-----~~~~~~~~~d~~~~~~a~~~~a~~li~~tdVdGvy~~~P~~~~~a~~~~~~~~~~~~~------ 190 (238)
T d1z9da1 122 EKNRIVVFGAG-----IGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIK------ 190 (238)
T ss_dssp HTTCEEEEEST-----TSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHT------
T ss_pred ccccccceecc-----eeccCCCCchHHHHHHHHHhhhhhhcccccccceecccccccccchhhccccccchhc------
Confidence 44444333222 22345678899999999999999999999999972 3577777776543110
Q ss_pred hhhhhHHHHHHhhhhccccccCCCCCCcccccCCCCCccccchhccccCCcccCCCCCCcccccccccCcccccccccCC
Q 006709 321 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 400 (634)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~~~~~~~~~GG~~~~~~~~~m 400 (634)
.| +|+ |
T Consensus 191 ------------------------------------------------------~g-----------~~~---------~ 196 (238)
T d1z9da1 191 ------------------------------------------------------RG-----------LKI---------M 196 (238)
T ss_dssp ------------------------------------------------------TT-----------CCC---------S
T ss_pred ------------------------------------------------------cC-----------cch---------h
Confidence 01 122 5
Q ss_pred HHHHHHHHHHHHcCCceEEEccCCcchhHHHHHHhhcCCcccccc
Q 006709 401 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 445 (634)
Q Consensus 401 ~~Kl~AA~~a~~~Gv~rv~I~~g~~~~~ll~el~~~~g~GT~I~~ 445 (634)
|+.||..|.++|++ ++|+||+.++. |.++++++.+||.|..
T Consensus 197 --k~~Aa~~a~~~gi~-v~I~nG~~p~~-i~~~l~Ge~~GTlIt~ 237 (238)
T d1z9da1 197 --DATASTLSMDNDID-LVVFNMNEAGN-IQRVVFGEHIGTTVSN 237 (238)
T ss_dssp --CHHHHHHHHHTTCE-EEEEETTSTTH-HHHHHTTCCCSEEEEC
T ss_pred --HHHHHHHHHHCCCc-EEEEeCCCcch-HHHHHCCCCCceEecc
Confidence 89999999999996 99999999997 6677889999999864
|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase RPA1999 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=99.71 E-value=3.5e-17 Score=151.65 Aligned_cols=121 Identities=19% Similarity=0.239 Sum_probs=96.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccC-------------CHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRR-------------TDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCG 514 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-------------~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ 514 (634)
+||+++++|++.+.+|+...+........ +.+.+.+.+ ..+||++.+|+||||+.+.+ .+
T Consensus 5 ~IR~a~~~D~~~l~~l~~~a~~~~~~~~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~-----~~ 79 (156)
T d2fiwa1 5 ALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG-----PD 79 (156)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEET-----TT
T ss_pred EEeeCCHHHHHHHHHHHHHHHHhhhhhcCCHHHHHhhccCCCCHHHHHHhccCceEEEEEECCEEEEEEeecc-----ch
Confidence 59999999999999998765543222112 223333333 35799999999999998863 35
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCee
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 593 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~ 593 (634)
+|..++|+|+|||||+|++|| ++++++|++.|+..+.+.+ ..|..||+++||+.
T Consensus 80 ~i~~l~V~p~~~g~GiG~~Ll-------------------------~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~ 134 (156)
T d2fiwa1 80 HIDMLYVHPDYVGRDVGTTLI-------------------------DALEKLAGARGALILTVDASDNAAEFFAKRGYVA 134 (156)
T ss_dssp EEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEE
T ss_pred hHHHHhccHHHcCCCHHHHHH-------------------------HHHHHHHHhcCCCEEEEEeccchhHHHHhCCCEE
Confidence 799999999999999999999 9999999999999999987 57999999999998
Q ss_pred cccccch
Q 006709 594 CSIEMIP 600 (634)
Q Consensus 594 ~~~~~~~ 600 (634)
++.+..+
T Consensus 135 ~~~~~~~ 141 (156)
T d2fiwa1 135 KQRNTVS 141 (156)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7755443
|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase PA0478 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=5.8e-16 Score=142.87 Aligned_cols=122 Identities=23% Similarity=0.249 Sum_probs=98.5
Q ss_pred cccccCccchHHHHHHhHHHHHHc---ccCccCCHHHHHhhc----C--cEEEEEECCeEEEEEEEeeec----CCCeEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL----D--SFYVVEREGQIIACAALFPFF----KEKCGE 515 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~---~~~~~~~~~~~~~~l----~--~~~V~~~~g~iiG~~~l~~~~----~~~~~e 515 (634)
.+||+|+++|++.|.+|+..+... ......+.+.+.+.+ . .++|++.+|+|+||+.+.+.. ....++
T Consensus 1 i~IR~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 80 (156)
T d2fe7a1 1 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 80 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeCCEEEEEEeEeecccccccCCeEE
Confidence 369999999999999998765431 122345777777655 1 568999999999999876543 234688
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
+..++|+|+|||+|+|++|+ ++++++|++.|+..+.+.+ .+|++||+++||
T Consensus 81 i~~~~V~p~~Rg~GiG~~L~-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF 135 (156)
T d2fe7a1 81 LEDLYVTPEYRGVGAGRRLL-------------------------RELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGA 135 (156)
T ss_dssp EEEEEECGGGCC--HHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred eeeeeechhhhccChHHHHH-------------------------HHHHHHHHHccCCcceEEEcCCCHHHHHHHHHCCC
Confidence 99999999999999999999 9999999999999999988 479999999999
Q ss_pred eecc
Q 006709 592 RECS 595 (634)
Q Consensus 592 ~~~~ 595 (634)
+..+
T Consensus 136 ~~~~ 139 (156)
T d2fe7a1 136 LPQD 139 (156)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9854
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.66 E-value=7.5e-16 Score=141.30 Aligned_cols=127 Identities=20% Similarity=0.276 Sum_probs=104.2
Q ss_pred cccccCccchHHHHHHhHHHHH----HcccC---cc-CCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLV----ESGAL---VR-RTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~----~~~~~---~~-~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~ 518 (634)
++||+++++|++.|.+++.... ..+.. .. ...+.+.+.+ ..+||++.+++++|++.+.+......+++..
T Consensus 1 m~iR~a~~~Dl~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~ 80 (157)
T d2fiaa1 1 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKR 80 (157)
T ss_dssp CCEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHhcCcchhhccchhHHHHHHhhccCceEEEEECCEEEEEEEEeecCccceeeecc
Confidence 4699999999999999986532 12111 11 1355565544 4788999999999999998776777899999
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeec
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 594 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~ 594 (634)
++|+|+|||+|+|++|+ ++++++|++.|+..+.+.| .+|++||+++||+.+
T Consensus 81 ~~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v 135 (157)
T d2fiaa1 81 FATSPNYIAKGYGSLLF-------------------------HELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKI 135 (157)
T ss_dssp EEECGGGTTTTHHHHHH-------------------------HHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred cEECHHHcCCCCcchhh-------------------------HHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEe
Confidence 99999999999999999 9999999999999999998 479999999999998
Q ss_pred ccccch
Q 006709 595 SIEMIP 600 (634)
Q Consensus 595 ~~~~~~ 600 (634)
+....+
T Consensus 136 ~e~~~~ 141 (157)
T d2fiaa1 136 HESLQM 141 (157)
T ss_dssp EEECCT
T ss_pred eeECCc
Confidence 865443
|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Phosphinothricin acetyltransferase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.66 E-value=1.2e-15 Score=140.67 Aligned_cols=123 Identities=23% Similarity=0.239 Sum_probs=100.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCC---CeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~---~~~ 514 (634)
.+||+++++|++.|.+++.+...+... .+.+.++....+ ..++|++.+|+|||++.+.+.... ...
T Consensus 2 i~IR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 81 (163)
T d1yr0a1 2 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 81 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEECCeEEEeecceeecccccccce
Confidence 369999999999999998876554322 234555554433 258899999999999998865432 346
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
++..++|+|+|||+|+|++|+ .+++++|+++|++.+.+.+ .++.+||+|+|
T Consensus 82 ~~~~~~v~p~~rg~Glg~~ll-------------------------~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~G 136 (163)
T d1yr0a1 82 REHSVYVHKDARGHGIGKRLM-------------------------QALIDHAGGNDVHVLIAAIEAENTASIRLHESLG 136 (163)
T ss_dssp EEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEEeeeeecccCCCCceeee-------------------------ecccccccccccceEEEEEecCCHHHHHHHHHCC
Confidence 777999999999999999999 9999999999999999887 57999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|++++.
T Consensus 137 F~~~G~ 142 (163)
T d1yr0a1 137 FRVVGR 142 (163)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 999875
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=6.7e-16 Score=144.64 Aligned_cols=126 Identities=16% Similarity=0.185 Sum_probs=99.2
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHH-------------HHHhhc----CcEEEEEECCeEEEEEEEeeec--
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------------ELLKAL----DSFYVVEREGQIIACAALFPFF-- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~-------------~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-- 509 (634)
.+||+|+++|++.|.+|........+....+.+ .+...+ ..++|++.+|++||++.+.+..
T Consensus 2 i~ir~at~~D~~~l~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~ 81 (173)
T d1tiqa_ 2 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 81 (173)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHhcCCHHHHHHHHhCCCcEEEEEEECCEecceEEEEecCcc
Confidence 369999999999999997655443332222333 232222 2589999999999999986432
Q ss_pred ----CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HH
Q 006709 510 ----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TR 581 (634)
Q Consensus 510 ----~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~ 581 (634)
.....+|..++|+|+|||+|+|++|| +++++.|++.|++.+++.+ .+
T Consensus 82 ~~~~~~~~~~i~~i~v~~~~rgkGig~~ll-------------------------~~~~~~~~~~g~~~i~l~v~~~N~~ 136 (173)
T d1tiqa_ 82 SEEMGAESLEIERIYIKNSFQKHGLGKHLL-------------------------NKAIEIALERNKKNIWLGVWEKNEN 136 (173)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEEETTCHH
T ss_pred ccccCCCeEEEEEEEECHHHcCCCCCcchh-------------------------HhhhhhhhhhhcchhhccccccCHH
Confidence 23468999999999999999999999 8999999999999999987 47
Q ss_pred hHHHHHhCCCeecccccc
Q 006709 582 TADWFKSRGFRECSIEMI 599 (634)
Q Consensus 582 a~~~Y~k~GF~~~~~~~~ 599 (634)
+.+||+++||+.++....
T Consensus 137 a~~fY~k~GF~~~g~~~~ 154 (173)
T d1tiqa_ 137 AIAFYKKMGFVQTGAHSF 154 (173)
T ss_dssp HHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHCCCEEeeEEEe
Confidence 999999999999886443
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Probab=99.65 E-value=7e-16 Score=145.09 Aligned_cols=146 Identities=15% Similarity=0.255 Sum_probs=107.6
Q ss_pred ccccCccchHHHHHHhHHHH---HHcccCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 521 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V 521 (634)
++|-++.+|.++...++..+ ..... ...+.+++.+.+ ..++|++.+|+||||+.+.+..+...++|..++|
T Consensus 2 ~~r~i~~~d~~e~~~lL~~l~~if~~~l-p~~~~~y~~r~i~d~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~ei~~laV 80 (162)
T d1qsra_ 2 DFDILTNDGTHRNMKLLIDLKNIFSRQL-PKMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (162)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHTSTTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHhhCcCCcEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEE
Confidence 35667777766654443322 22222 234555555443 2588888899999999998888888999999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccccch
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~~ 600 (634)
+|+|||||+|++|| +++++.|++.|++.|++.+ ..|..||+|+||+..+ .+|
T Consensus 81 ~p~~rg~GiG~~Ll-------------------------~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~--~~~ 133 (162)
T d1qsra_ 81 TANEQVRGYGTRLM-------------------------NKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEH--RMP 133 (162)
T ss_dssp CGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEECTTTHHHHHHTTCBSSC--SSC
T ss_pred cHHHccCchHHHHH-------------------------HHHHHHHHhCCCeEEEEecCCccHHHHHhCCCeeec--cCC
Confidence 99999999999999 9999999999999999987 5689999999998754 346
Q ss_pred hHhhhhccCCCCceEEE-eecCCC
Q 006709 601 EERRKRINLSRNSKYYM-KKLLPD 623 (634)
Q Consensus 601 ~~~~~~~~~~~~s~~~~-k~l~~~ 623 (634)
...+..+-.+....+.| +.|.|.
T Consensus 134 ~~~~~~~~k~y~~~~~M~~~l~~~ 157 (162)
T d1qsra_ 134 QEKWKGYIKDYDGGTLMECYIHPY 157 (162)
T ss_dssp HHHHBTTBCCCTTSEEEEEECCTT
T ss_pred hhHhcCcccCCCCeEEEEEecCCC
Confidence 55554443333344555 888654
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Probab=99.65 E-value=1.5e-15 Score=144.19 Aligned_cols=142 Identities=15% Similarity=0.271 Sum_probs=104.2
Q ss_pred cccCccchH---HHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 451 TRTAKVTDL---SGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 451 iR~a~~~D~---~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
||.++.+|. +++.+++...+...+. ....+++.+.+ ..+++++.+++++|++.+.+......++|..|+|+|+
T Consensus 3 I~e~~~~~p~~~~~l~~l~~~~~p~~~~-~~~~~~~~~~~~~~~~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~V~p~ 81 (180)
T d1n71a_ 3 ISEFDRNNPVLKDQLSDLLRLTWPEEYG-DSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVESS 81 (180)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHCTTTSS-STHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEECTT
T ss_pred EEEccccChHHHHHHHHHHHHhCCcccC-cchHHHHHHHhCCCCEEEEEEECCeEEEEEEEEEecCCCEEEEEEEEEchH
Confidence 555555553 5666665433322221 11234444444 3688999999999999988776677899999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH------------------------
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT------------------------ 580 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~------------------------ 580 (634)
|||||+|++|| +++++.|++.|+..|+|.|.
T Consensus 82 ~rg~GiG~~Ll-------------------------~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (180)
T d1n71a_ 82 RRKNQIGTRLV-------------------------NYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASI 136 (180)
T ss_dssp SCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTC
T ss_pred HhccHHHHHHH-------------------------HHHHHHHHHCCCCEEEEEecCcccccchhhhhcccccccccchh
Confidence 99999999999 99999999999999999762
Q ss_pred -----HhHHHHHhCCCeecccccchhHhhhhccCCCCceEEE-eecCCCCC
Q 006709 581 -----RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLPDTS 625 (634)
Q Consensus 581 -----~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~~~ 625 (634)
.|.+||+|+||+.++. +|. ++......++| |.|.|.++
T Consensus 137 ~~~n~~a~~fY~k~Gf~~~g~--~~~-----~~g~~~~~~~m~k~l~~~~~ 180 (180)
T d1n71a_ 137 QNLREHPYEFYEKLGYKIVGV--LPN-----ANGWDKPDIWMAKTIIPRPD 180 (180)
T ss_dssp CBSSCCTHHHHHHTTCEEEEE--ETT-----TTSTTCCEEEEEEECSCCCC
T ss_pred ccccHHHHHHHHHCCCEEEee--ecC-----CCCCCCCcEEEEEecCCCCC
Confidence 3789999999999864 443 12223455666 99988875
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Probab=99.64 E-value=6.7e-16 Score=140.49 Aligned_cols=116 Identities=21% Similarity=0.271 Sum_probs=93.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC--cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~--~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
..|+.++.+|.+.|.+.+..+....+. +++..... .++|++.+++|||++...+. ...++|..++|+|+||
T Consensus 4 ~~i~~~t~~~~~~I~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V~~~~r 76 (140)
T d1y9wa1 4 KHIENGTRIEGEYIKNKVIQYNMSILT-----DEVKQPMEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVR 76 (140)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHTSC-----GGGCCCCEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGT
T ss_pred chhcCCcHHHHHHHHHHHHHHHHhhCh-----HHHhCcccceEEEEEeCCCcEEEEEEEEEe--cCeeEEEEEEECcccc
Confidence 468899999999998876554443332 11112222 46777889999999998864 3678999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~ 596 (634)
|||+|++|| +++++.|++.|+..+++.+ +.|+.||+|+||++++.
T Consensus 77 g~GiG~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g~ 123 (140)
T d1y9wa1 77 HDGYGSQLL-------------------------HEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGV 123 (140)
T ss_dssp TTTHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEE
T ss_pred CCCcHHHHH-------------------------HHHHHHHHhccceEEEEeechhhHHHHHHhCCCEEEEE
Confidence 999999999 9999999999999999998 56999999999999875
|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YqiY species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=3.6e-16 Score=144.27 Aligned_cols=147 Identities=12% Similarity=0.147 Sum_probs=108.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc-CcEEEEEECCeEEEEEEEeeec-CCCeEEEEEEEECCCCc
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 526 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l-~~~~V~~~~g~iiG~~~l~~~~-~~~~~ei~~l~V~p~~r 526 (634)
++||+++.+|++.|.++++.++..........+.+.+.. +..||++.+|++||++..++.. ....+++..++|+|+||
T Consensus 2 m~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 81 (157)
T d1mk4a_ 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhcCCchhhHHHHhhhhccCceEEEEEECCEEEEEeeeeeeccCCccceeeEEEEEHHHc
Confidence 579999999999999997655433322222223333333 4678999999999998766443 34578999999999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccccchhH
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE 602 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~~~~~~ 602 (634)
|+|+|++|+ +++++.+++.|+..+++.+ +.+.+||+|+||+.......+..
T Consensus 82 g~Gig~~Ll-------------------------~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~~ 136 (157)
T d1mk4a_ 82 KMQIGKQLY-------------------------DVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNG 136 (157)
T ss_dssp HHHHHHHHH-------------------------HHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETT
T ss_pred CCcccchHH-------------------------HHHHHhhccccceEEEEEeccchHHHHHHHHHCCCEEeeeEeccCC
Confidence 999999999 9999999999999999988 46899999999998765433322
Q ss_pred --hhhhccCCCCceEEE-eec
Q 006709 603 --RRKRINLSRNSKYYM-KKL 620 (634)
Q Consensus 603 --~~~~~~~~~~s~~~~-k~l 620 (634)
....|+....+.++| |+|
T Consensus 137 ~~~~~~y~g~~~d~~~~~k~l 157 (157)
T d1mk4a_ 137 ISVFANYDGPGQDRVLFVKNI 157 (157)
T ss_dssp EEEBTTTTSTTCCBEEEEEEC
T ss_pred ceeEccCCCCCCEEEEEEEEC
Confidence 222345444444544 765
|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA4866 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=2.2e-15 Score=140.00 Aligned_cols=146 Identities=19% Similarity=0.203 Sum_probs=107.0
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEE-ECCeEEEEEEEeeecCC---CeE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVE-REGQIIACAALFPFFKE---KCG 514 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~-~~g~iiG~~~l~~~~~~---~~~ 514 (634)
+||+|+++|++.|.+|+++++..+.. .+.+.++....+ ..++|+. .++++||++.+.++... ...
T Consensus 1 tiR~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (169)
T d1yvoa1 1 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGT 80 (169)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTTE
T ss_pred CcccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEecCCCEEEeeccccccccccccce
Confidence 48999999999999999877654332 234566555544 2456654 57899999999876442 345
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
.+..++|+|+|||||+|++|+ +.++++++++|+.++.+.+ ..+++||+++|
T Consensus 81 ~~~~i~v~p~~rg~G~g~~l~-------------------------~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~G 135 (169)
T d1yvoa1 81 VEHSVYVRDDQRGKGLGVQLL-------------------------QALIERARAQGLHVMVAAIESGNAASIGLHRRLG 135 (169)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTT
T ss_pred EEEEeecChhhhcCCeeeeee-------------------------eeeccccccccceEEEEEeccCcHHHHHHHhcCC
Confidence 566899999999999999999 9999999999999999988 57899999999
Q ss_pred CeecccccchhHhhhhccCCCCceEEE-eecCCCC
Q 006709 591 FRECSIEMIPEERRKRINLSRNSKYYM-KKLLPDT 624 (634)
Q Consensus 591 F~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~~ 624 (634)
|++.+.. +... ..+......++| |.|.|.+
T Consensus 136 F~~~g~~--~~~~--~~~g~~~D~~~~~~~l~~~~ 166 (169)
T d1yvoa1 136 FEISGQM--PQVG--QKFGRWLDLTFMQLNLDPTR 166 (169)
T ss_dssp CEEEEEE--EEEE--EETTEEEEEEEEEEESCTTC
T ss_pred cEEEEEE--eeEE--EECCEEEEEEEEEEECCCCC
Confidence 9998742 2111 111222345666 6665554
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=1.3e-15 Score=140.07 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=108.1
Q ss_pred cccccCccchHHHHHHhHHHHHHc-----ccCccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES-----GALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~-----~~~~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~ 520 (634)
.++|+++++|++.|.++.+..... ....+.+.+.+.+.+ ..++|++.+|++|||+.+.+......++|..++
T Consensus 3 lt~R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~~~~~~~i~~~~ 82 (160)
T d2i6ca1 3 LSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMM 82 (160)
T ss_dssp CEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEE
T ss_pred eEEecCCHHHHHHHHHHHhCHHHHhhhcccccCCCCHHHHHHHHhccCCeEEEEECCEEEEEeeeeccccCCEEEEEEeE
Confidence 368999999999999986433221 222345666666655 368889999999999999887777789999999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
|+|+|||||+|++|+ +.+++.|.+. +.+.+.+.+ .++.+||+++||+.++
T Consensus 83 V~p~~rgkGig~~ll-------------------------~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~~ 137 (160)
T d2i6ca1 83 VAPAARGLGVARYLI-------------------------GVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRA 137 (160)
T ss_dssp ECGGGTTTTHHHHHH-------------------------HHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred eCHhHcCCcchhhhh-------------------------HHHHHHHHHhccccceeeecccccchhhhHHHhCCCEEEE
Confidence 999999999999999 8888888654 678887776 4799999999999987
Q ss_pred cccchhHhhhhccCCCCceEEEe-ecCC
Q 006709 596 IEMIPEERRKRINLSRNSKYYMK-KLLP 622 (634)
Q Consensus 596 ~~~~~~~~~~~~~~~~~s~~~~k-~l~~ 622 (634)
..... ..+..+...+.|+ .|.|
T Consensus 138 ~~~~~-----~~~g~~~~~~~m~k~l~p 160 (160)
T d2i6ca1 138 IAERH-----DPDGRRVALIQMDKPLEP 160 (160)
T ss_dssp EEEEE-----CTTSCEEEEEEEEEECCC
T ss_pred EEEee-----cCCCCEEEEEEEeeeCCC
Confidence 54321 1123344556674 4433
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.60 E-value=4.8e-15 Score=139.50 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=96.3
Q ss_pred CCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccc
Q 006709 478 RTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHIS 552 (634)
Q Consensus 478 ~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~ 552 (634)
.+.+.+...+ ..++|++.+++|||++.+.++.....++|..++|+|+|||+|+|++||
T Consensus 33 ~~~~~i~r~~~d~~~~~~~v~~~~~~iVG~~~~~~~~~~~~aeI~~laV~p~~rg~GiG~~L~----------------- 95 (164)
T d1ygha_ 33 MPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLM----------------- 95 (164)
T ss_dssp SCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEEECTTCCCTTHHHHHH-----------------
T ss_pred ccHHHHHHHHhccCCceEEEEEeCCeEEEEEEEEecCCCCEEEEEEEEECchhccCHHHHHHH-----------------
Confidence 3445555433 258888999999999999887777889999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHHcCCcEEEEec--HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEE-eecCCCCCC
Q 006709 553 TNGFPFLRDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLPDTSG 626 (634)
Q Consensus 553 ~~~~~~~~~~i~~~a~~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~~~~ 626 (634)
+++++.+++.+...+.+.+ ..|..||+++||+.. ..+|...+..|-.+....++| +.|+|.-+.
T Consensus 96 --------~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~--~~~~~~~~~gy~kd~e~~ilM~~~l~p~i~~ 162 (164)
T d1ygha_ 96 --------NHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKE--ITLDKSIWMGYIKDYEGGTLMQCSMLPRIRY 162 (164)
T ss_dssp --------HHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSS--CCSCHHHHBTTBCCTTCCEEEEEECCCCCCC
T ss_pred --------HHHHHHHHhhCceEEEEEecCHHHHHHHHhcCCEEe--cccchhhhcCcccCCCCeEEEEEEcCCCCCC
Confidence 8888888887766666655 579999999999764 456777776666665566666 799886543
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.60 E-value=9.6e-16 Score=139.73 Aligned_cols=125 Identities=22% Similarity=0.380 Sum_probs=94.6
Q ss_pred cccccccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--------------------C-cEEEEEECCeEEEEE
Q 006709 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------------------D-SFYVVEREGQIIACA 503 (634)
Q Consensus 445 ~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--------------------~-~~~V~~~~g~iiG~~ 503 (634)
||.| .||+++++|++++.+++..+...... +.+.+...+ . .+++++.++++||++
T Consensus 2 p~~~-~IR~~~~~D~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~ 77 (157)
T d1i12a_ 2 PDGF-YIRRMEEGDLEQVTETLKVLTTVGTI---TPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATG 77 (157)
T ss_dssp CTTE-EEEECCGGGHHHHHHHHTTTSCCCCC---CHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEE
T ss_pred CCCc-EEEeCCHHHHHHHHHHHHHHhhcccc---CHHHHHHHHHhhhhhhhHHHhhhhcccccceEEEEEEECCEEEEEE
Confidence 5665 79999999999999986432211111 111111110 1 234555689999999
Q ss_pred EEeeec-----CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEe
Q 006709 504 ALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLL 578 (634)
Q Consensus 504 ~l~~~~-----~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~ 578 (634)
.+.... ....++|..|+|+|+|||+|+|++|+ ++++++|++.|++.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~-------------------------~~~~~~a~~~g~~~i~l~ 132 (157)
T d1i12a_ 78 NIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLI-------------------------DQLVTIGFDYGCYKIILD 132 (157)
T ss_dssp EEEEEECSHHHHCEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEE
T ss_pred EEeccccccccCcceeEEEEEEecHhhcCCCchHHHH-------------------------HHHHHHHHHCCCCEEEEE
Confidence 886432 23558999999999999999999999 999999999999999998
Q ss_pred c-HHhHHHHHhCCCeeccccc
Q 006709 579 T-TRTADWFKSRGFRECSIEM 598 (634)
Q Consensus 579 t-~~a~~~Y~k~GF~~~~~~~ 598 (634)
+ ..+.+||+|+||+.+++.|
T Consensus 133 ~~~~~~~~Y~k~GF~~~g~~m 153 (157)
T d1i12a_ 133 CDEKNVKFYEKCGFSNAGVEM 153 (157)
T ss_dssp ECGGGHHHHHHTTCEEEEEEE
T ss_pred ECHHHHHHHHhCCCEEeeEEE
Confidence 8 6789999999999999876
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=7.8e-15 Score=137.85 Aligned_cols=118 Identities=15% Similarity=0.242 Sum_probs=97.5
Q ss_pred CHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccC
Q 006709 479 TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTN 554 (634)
Q Consensus 479 ~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~ 554 (634)
+.+++.+.+ ..++|+..+|++||++.+.++.+.+.+||..++|+|+|||||+|++||
T Consensus 39 ~~~yi~r~~~d~~~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~~~qgkGiG~~Lm------------------- 99 (162)
T d1z4ra1 39 PKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLM------------------- 99 (162)
T ss_dssp CHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSSHHHHHH-------------------
T ss_pred cHHHHHHHhcCCCceEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEChhhhhhhHHHHHH-------------------
Confidence 455555443 367888899999999999988888899999999999999999999999
Q ss_pred CCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccccchhHhhhhccCCCCceEEE-eecCCC
Q 006709 555 GFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLPD 623 (634)
Q Consensus 555 ~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l~~~ 623 (634)
+++++.+++.|++.+++.+ +.|.+||+|+||++. ..+|+.+|..+-.+-+...+| .+|.|.
T Consensus 100 ------~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~GF~~~--~~~~~~~~~~~ikdy~~~~lm~~~~~p~ 162 (162)
T d1z4ra1 100 ------NHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKD--IKVPKSRYLGYIKDYEGATLMECELNPR 162 (162)
T ss_dssp ------HHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESC--CCSCHHHHTTTSCCCTTCEEEEEECCCC
T ss_pred ------HHHHHHHHHCCCcEEEEecCcchHHHHHhCCCeEe--ccCchhHhcCCccCCCCeEEEEEecCCC
Confidence 9999999999999999887 679999999999763 457888777664444455555 788763
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.60 E-value=7.5e-15 Score=136.86 Aligned_cols=126 Identities=24% Similarity=0.342 Sum_probs=99.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc-------------CcEEEEEECCeEEEEEEEeeecC---
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK--- 510 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l-------------~~~~V~~~~g~iiG~~~l~~~~~--- 510 (634)
.||+|+.+|++.|.+|+...+.+... ...+.+.+...+ ..++|++.+++++|+....+...
T Consensus 2 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~e~~~~i~g~~~~~~~~~~~~ 81 (189)
T d1u6ma_ 2 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 81 (189)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred EeeeCcHHHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHhCcccccccceEEEEEEcCeEEEEEEEeccccccc
Confidence 48999999999999998877654322 223444433332 14799999999999988764321
Q ss_pred ---------------------------CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHH
Q 006709 511 ---------------------------EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563 (634)
Q Consensus 511 ---------------------------~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i 563 (634)
+..++|..|+|+|+|||+|+|++|+ +++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~ 136 (189)
T d1u6ma_ 82 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLL-------------------------DAL 136 (189)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHH-------------------------HTH
T ss_pred cchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchh-------------------------HHH
Confidence 1237899999999999999999999 999
Q ss_pred HHHHHHcCCcEEEEec----HHhHHHHHhCCCeecccccch
Q 006709 564 EKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 564 ~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~~~~ 600 (634)
++.|++.|++.+.+.+ +.+.+||+++||++++..+++
T Consensus 137 ~~~a~~~g~~~~~l~v~~~N~~a~~~Yek~GF~~~~~~~~~ 177 (189)
T d1u6ma_ 137 PEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTIS 177 (189)
T ss_dssp HHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCEEEEEEEET
T ss_pred HHHHHhcCCceeEEEEcCCCHHHHHHHHHCCCEEEEEEEEC
Confidence 9999999999999888 468999999999998875554
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Probab=99.60 E-value=4.5e-15 Score=139.28 Aligned_cols=122 Identities=21% Similarity=0.313 Sum_probs=97.3
Q ss_pred ccccCccchHH----HHHHhHHHHHHcc----cCccCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeecC
Q 006709 450 GTRTAKVTDLS----GIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 510 (634)
Q Consensus 450 ~iR~a~~~D~~----~i~~l~~~~~~~~----~~~~~~~~~~~~~l-----------~~~~V~~~~g~iiG~~~l~~~~~ 510 (634)
+||.++++|++ .+.+++...+..+ +..+.+.++....+ ..++|++.+|+|||++.+.+...
T Consensus 2 ~iR~~~~ed~~~~~~~l~~ll~d~~~~g~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~ 81 (170)
T d1ghea_ 2 QLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQK 81 (170)
T ss_dssp EEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred ceEECCHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEeeccc
Confidence 58999999995 6666665555443 33455655543322 15789999999999999886543
Q ss_pred C---CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec---HHhHH
Q 006709 511 E---KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT---TRTAD 584 (634)
Q Consensus 511 ~---~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~ 584 (634)
. ..++|..++|+|+|||+|+|++|+ +++++++++.|+..+.+.+ ..+.+
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~g~~~l~L~~~~n~~a~~ 136 (170)
T d1ghea_ 82 PNGLNRAEVQKLMVLPSARGRGLGRQLM-------------------------DEVEQVAVKHKRGLLHLDTEAGSVAEA 136 (170)
T ss_dssp TTCTTEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTSHHHH
T ss_pred cCCCcEEEEEEEEEcchhhcCCcHHHHH-------------------------HHHHHHHHHcCCceEeeecccchHHHH
Confidence 3 348999999999999999999999 9999999999999999876 46899
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
||+++||++++.
T Consensus 137 fY~k~GF~~~g~ 148 (170)
T d1ghea_ 137 FYSALAYTRVGE 148 (170)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999999999775
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Probab=99.60 E-value=3.7e-15 Score=134.52 Aligned_cols=121 Identities=17% Similarity=0.116 Sum_probs=95.4
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec-------CCCeEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEVA 517 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-------~~~~~ei~ 517 (634)
+.||+++.+|++.+.++...++..... .....++...+ ...+++..+++++|++.+.+.. ....++|.
T Consensus 3 m~Ir~~~~~d~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i~ 81 (147)
T d1s3za_ 3 MDIRQMNKTHLEHWRGLRKQLWPGHPD-DAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFLE 81 (147)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCH-HHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHCCCCCc-HHHHHHHHHHhhCCCcEEEEEEECCEEEEEEEEEeecCcccccCCCCeEEEE
Confidence 469999999999999998766433221 11122222222 2568888999999999886432 23458899
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.|+|+|+|||||+|++|| +.++++|++.|++.+.+.+ +.|.+||+++||++
T Consensus 82 ~l~V~~~~rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY~k~GF~~ 136 (147)
T d1s3za_ 82 GIFVLPSFRQRGVAKQLI-------------------------AAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEE 136 (147)
T ss_dssp EEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred EEEECHHHcCCcHHHHHH-------------------------HHHHHHhhhccccceEEEEcCCCHHHHHHHHHCCCEE
Confidence 999999999999999999 9999999999999999998 46899999999988
Q ss_pred cc
Q 006709 594 CS 595 (634)
Q Consensus 594 ~~ 595 (634)
++
T Consensus 137 ~~ 138 (147)
T d1s3za_ 137 TE 138 (147)
T ss_dssp EE
T ss_pred EC
Confidence 66
|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative phosphinothricin acetyltransferase YwnH species: Bacillus subtilis [TaxId: 1423]
Probab=99.59 E-value=2.3e-15 Score=139.34 Aligned_cols=122 Identities=27% Similarity=0.442 Sum_probs=94.9
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc------CcEEEEE-ECCeEEEEEEEeeecCC----Ce
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL------DSFYVVE-REGQIIACAALFPFFKE----KC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l------~~~~V~~-~~g~iiG~~~l~~~~~~----~~ 513 (634)
..||+++++|++.|.+|+......... .+.+.++..+.+ ..++|++ .+|+|+|++.+.++... ..
T Consensus 2 ~~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (165)
T d1vhsa_ 2 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 81 (165)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEecCCceEeeeeeeeccccccccce
Confidence 368999999999999999876654432 122333333322 2456665 56899999999876432 23
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
+++ .++|+|+|||+|+|++|+ +.++++|++.|++.+.+.+ .++++||+++
T Consensus 82 ~~~-~~~v~~~~rg~Gig~~l~-------------------------~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~ 135 (165)
T d1vhsa_ 82 AEV-SIYIDEACRGKGVGSYLL-------------------------QEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKH 135 (165)
T ss_dssp EEE-EEEECGGGCSSSHHHHHH-------------------------HHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHT
T ss_pred EEE-eeecCchhhcccccchhh-------------------------hhhhhhhccccceeEEEEEecCCHHHHHHHHHC
Confidence 555 799999999999999999 8899999999999999988 5789999999
Q ss_pred CCeeccc
Q 006709 590 GFRECSI 596 (634)
Q Consensus 590 GF~~~~~ 596 (634)
||+.++.
T Consensus 136 GF~~~g~ 142 (165)
T d1vhsa_ 136 GFAEWGL 142 (165)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 9999886
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Probab=99.58 E-value=1e-15 Score=142.26 Aligned_cols=137 Identities=21% Similarity=0.295 Sum_probs=98.5
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC-c------cCCHHHHHhhcCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEEC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL-V------RRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 522 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~-~------~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~ 522 (634)
.||..+.+| +++..|++........ . ..+.+.+.+.--.|||++.+|++|||+.+.+. .+..++|..++|+
T Consensus 2 ~I~~~~~~~-~~i~~L~~~~~~~~~~~~p~e~~~~l~~~~l~~~~~~~~va~~~~~~vG~~~~~~~-~~~~~~i~~~~V~ 79 (151)
T d1yx0a1 2 HIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRTS 79 (151)
T ss_dssp CEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCCS
T ss_pred eeEECCCCC-HHHHHHHHHHHHHHHhcCCchhhhccCHhHccCCCeEEEEEEECCEEEEEEEEEec-cCceEEEEeeeeC
Confidence 466666666 6666665432221111 0 11233333222378999999999999999854 4578999999999
Q ss_pred CCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec------HHhHHHHHhCCCeeccc
Q 006709 523 PECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSI 596 (634)
Q Consensus 523 p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t------~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||+|+|++|+ +++++.|++.|++.++|.| ..|++||+|+||++++.
T Consensus 80 p~~Rg~Glg~~Ll-------------------------~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~~~~~ 134 (151)
T d1yx0a1 80 ASHLRKGVAKQVL-------------------------QHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEP 134 (151)
T ss_dssp TTTCCSCHHHHHH-------------------------HHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCC
T ss_pred HHHHhCChhHHHH-------------------------HHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHcCCEECCc
Confidence 9999999999999 9999999999999999976 35899999999999763
Q ss_pred ccchhHhhhhccCCCCceEEEeec
Q 006709 597 EMIPEERRKRINLSRNSKYYMKKL 620 (634)
Q Consensus 597 ~~~~~~~~~~~~~~~~s~~~~k~l 620 (634)
++ .|..+.++.||.|.|
T Consensus 135 --~~-----~y~~d~~~~~m~K~L 151 (151)
T d1yx0a1 135 --FA-----DYGEDPNSVFMTKKL 151 (151)
T ss_dssp --CT-----TSCCCTTCCCEEECC
T ss_pred --cC-----CCCCCCccEEEEEEC
Confidence 33 244456665544654
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Probab=99.57 E-value=4.1e-15 Score=134.84 Aligned_cols=123 Identities=15% Similarity=0.180 Sum_probs=93.6
Q ss_pred cccccCccchHHHHHHhHHHHHH----cccCccCCHHHHHh--hc-----CcEEEEEECCeEEEEEEEeeec-----CCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE----SGALVRRTDEELLK--AL-----DSFYVVEREGQIIACAALFPFF-----KEK 512 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~----~~~~~~~~~~~~~~--~l-----~~~~V~~~~g~iiG~~~l~~~~-----~~~ 512 (634)
.+||+|+++|++.|.+++..... .....+.+.++... .+ ..+++++.+|++||++.+.+.. ...
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~ 81 (150)
T d1z4ea1 2 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 81 (150)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhhhccccccccchhHHHHHHHHHhcCCCcEEEEEEECCceEEEEEEEeecccCcCCCC
Confidence 36899999999999999753211 11112222222111 11 2678889999999999886432 234
Q ss_pred eEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHh
Q 006709 513 CGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKS 588 (634)
Q Consensus 513 ~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k 588 (634)
.++|..++|+|+|||+|||++|+ ++++++|++.|++.|.+.+ .++.+||+|
T Consensus 82 ~~~i~~~~v~~~~rg~Gig~~l~-------------------------~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k 136 (150)
T d1z4ea1 82 RATIEGVRTHSAARGQGIGSQLV-------------------------CWAIERAKERGCHLIQLTTDKQRPDALRFYEQ 136 (150)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHTTEEEEEEEEETTCTTHHHHHHH
T ss_pred EEEEEEEEcCHHHcCCChhHHHH-------------------------HHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHH
Confidence 58999999999999999999999 9999999999999999988 469999999
Q ss_pred CCCeeccc
Q 006709 589 RGFRECSI 596 (634)
Q Consensus 589 ~GF~~~~~ 596 (634)
+||+..+.
T Consensus 137 ~GF~~~~~ 144 (150)
T d1z4ea1 137 LGFKASHE 144 (150)
T ss_dssp HTCEEEEE
T ss_pred CCCEEcce
Confidence 99988664
|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase SP0256 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.54 E-value=6e-15 Score=133.33 Aligned_cols=122 Identities=17% Similarity=0.137 Sum_probs=96.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhc---CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l---~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
.+||+++..|++++.+|++.. ++. ...+.+.+...+ ..+++++.++++||++.+.+ .....++|..++|+|+
T Consensus 2 i~Ir~~~~~d~~ei~~l~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~l~V~~~ 77 (137)
T d2atra1 2 ITIKKQEIVKLEDVLHLYQAV---GWTNYTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPS 77 (137)
T ss_dssp EEEEEESCCCHHHHHHHHHTT---CCCC-----CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTT
T ss_pred EEEEeCChhhHHHHHHHHHHc---CCCCCCCCHHHHHHHHhCCcEEEEEEECCEEEEEEEEEc-cCCceEEEEEEEEEHH
Confidence 468999999999999997542 222 122445555544 36888999999999998874 3567889999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecccccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~~~ 599 (634)
|||+|+|++|+ +++++.+++.|+..+.+.+ ..+..||+++||+..+....
T Consensus 78 ~rg~GiG~~Ll-------------------------~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~GF~~~~~~~~ 128 (137)
T d2atra1 78 YQRQGIGSSLM-------------------------KEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTYDC 128 (137)
T ss_dssp SCSSSHHHHHH-------------------------HHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGGTC
T ss_pred HcCchHHHHHH-------------------------HHHHHHHHHCCCeEEEEeecHHHHHHHHhCCCEECccCCc
Confidence 99999999999 9999999999998887766 57899999999998766443
|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0244 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.54 E-value=1.4e-14 Score=132.83 Aligned_cols=123 Identities=20% Similarity=0.265 Sum_probs=95.1
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecCC---CeEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKE---KCGEVAAI 519 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~~---~~~ei~~l 519 (634)
..||+++++|++.|.+|.+........ .+.....+.+.+ ..+||++.+|++||++.+.+.... ...++..+
T Consensus 5 i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~ 84 (161)
T d2ae6a1 5 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLLSI 84 (161)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEEEE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhhcCCcccCChhhHHHHHHhCCCCcEEEEEECCEEEEEEeecccccccccceEEEEEE
Confidence 469999999999999996543322211 112233344444 478999999999999999864332 34778899
Q ss_pred EECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeecc
Q 006709 520 GVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 595 (634)
Q Consensus 520 ~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~ 595 (634)
+|+|+|||||+|++|+ +.+++.+++.|++++.+.+ .++.+||+++||+..+
T Consensus 85 ~v~~~~rg~Gig~~ll-------------------------~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~~~g 139 (161)
T d2ae6a1 85 GVSPDFQDQGIGGSLL-------------------------SYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEA 139 (161)
T ss_dssp EECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEE
T ss_pred EEeeccccccccccch-------------------------hheeeccccccchhheehhccccHHHHHHHHHCCCEEEE
Confidence 9999999999999999 9999999999999999887 5689999999999977
Q ss_pred c
Q 006709 596 I 596 (634)
Q Consensus 596 ~ 596 (634)
.
T Consensus 140 ~ 140 (161)
T d2ae6a1 140 H 140 (161)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase TTHA1209 species: Thermus thermophilus [TaxId: 274]
Probab=99.54 E-value=2.3e-14 Score=133.06 Aligned_cols=126 Identities=19% Similarity=0.212 Sum_probs=95.8
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC--c------cCCHHH----HHhhc------Cc-EEEEEECCeEEEEEEEeeecC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL--V------RRTDEE----LLKAL------DS-FYVVEREGQIIACAALFPFFK 510 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~--~------~~~~~~----~~~~l------~~-~~V~~~~g~iiG~~~l~~~~~ 510 (634)
.||+++++|++.|.+|....+...+. . ..+.+. +.+.+ .. +++.+.+++++|++.+.+...
T Consensus 2 ~IR~a~~~D~~~i~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~ 81 (174)
T d2cy2a1 2 RIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDRA 81 (174)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECCS
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHhccChHHHHHHHHHHHhcCCCCceEEEEEEcCCEEEeeeecccccc
Confidence 68999999999999998765443321 1 112222 22222 13 444456789999999876543
Q ss_pred ----CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHh
Q 006709 511 ----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRT 582 (634)
Q Consensus 511 ----~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a 582 (634)
...++|..++|+|+|||+|+|++|+ ..+.+.|++.|++.+.+.+ +.+
T Consensus 82 ~~~~~~~~~i~~l~v~~~~rg~Gig~~ll-------------------------~~~~~~a~~~g~~~~~l~v~~~N~~a 136 (174)
T d2cy2a1 82 SGFPGYTAELWAIYVLPTWQRKGLGRALF-------------------------HEGARLLQAEGYGRMLVWVLKENPKG 136 (174)
T ss_dssp CSCTTCCEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHH
T ss_pred ccccCCceEEEEEEEcHHHhhCCCchHHH-------------------------HHHHHHHHHcCCCeEEEEEeCCCHHH
Confidence 3458999999999999999999999 9999999999999999988 468
Q ss_pred HHHHHhCCCeecccccch
Q 006709 583 ADWFKSRGFRECSIEMIP 600 (634)
Q Consensus 583 ~~~Y~k~GF~~~~~~~~~ 600 (634)
++||+|+||++.+....+
T Consensus 137 ~~~y~k~GF~~~g~~~~~ 154 (174)
T d2cy2a1 137 RGFYEHLGGVLLGEREIE 154 (174)
T ss_dssp HHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHCCCEEEeEEEEe
Confidence 999999999998864443
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.53 E-value=7e-14 Score=128.50 Aligned_cols=125 Identities=16% Similarity=0.139 Sum_probs=97.4
Q ss_pred cccccCccchHHHHHHhHHHHHH-cccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeec--------------
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------------- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~-------------- 509 (634)
.++|+++++|++.|.+|.+..+. .....+++.+.+...+ ..+++++.+++++|++......
T Consensus 6 ~~iR~~t~~D~~~l~~l~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~ 85 (166)
T d1cjwa_ 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRP 85 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCCT
T ss_pred HHhccCCHHHHHHHHHHHHHhCCcccccCcccHHHHhhhhhcCCceEEEEEECCceeeeecccccccccchhhhhhcccC
Confidence 56999999999999999765432 2222455777766655 4789999999999998764321
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc-CCcEEEEec-HHhHHHHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL-GLDMLFLLT-TRTADWFK 587 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~-g~~~l~l~t-~~a~~~Y~ 587 (634)
..+.++|..|+|+|+|||+|+|++|| +.+.+++++. ++..+.+.+ ..+++||+
T Consensus 86 ~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~~~~~~~~~~i~l~~~~~ai~fY~ 140 (166)
T d1cjwa_ 86 RGHSAHLHALAVHRSFRQQGKGSVLL-------------------------WRYLHHVGAQPAVRRAVLMCEDALVPFYQ 140 (166)
T ss_dssp TCCEEEEEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHTSTTCCEEEEEECGGGHHHHH
T ss_pred CCCEEEEEEEEECHHHccCCHHHHHH-------------------------HHHHHHHHHhCCCceEEEecCHHHHHHHH
Confidence 23568999999999999999999999 7766766554 677787776 67999999
Q ss_pred hCCCeeccccc
Q 006709 588 SRGFRECSIEM 598 (634)
Q Consensus 588 k~GF~~~~~~~ 598 (634)
|+||+.++...
T Consensus 141 k~GF~~~G~~~ 151 (166)
T d1cjwa_ 141 RFGFHPAGPCA 151 (166)
T ss_dssp TTTEEEEEECS
T ss_pred HCCCEEEccee
Confidence 99999998644
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Probab=99.53 E-value=1.7e-14 Score=129.71 Aligned_cols=125 Identities=14% Similarity=0.210 Sum_probs=93.8
Q ss_pred ccccCccchHHHHHHhHHHHHH-----cccCc-----cCCHHHHHhhc-------C--cEEEEEECCeEEEEEEEeeec-
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVE-----SGALV-----RRTDEELLKAL-------D--SFYVVEREGQIIACAALFPFF- 509 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~-----~~~~~-----~~~~~~~~~~l-------~--~~~V~~~~g~iiG~~~l~~~~- 509 (634)
.|||++++|++.+.+++..... ..... ....+++.+.+ . .+++...+++++|++.+.+..
T Consensus 3 ~lRp~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~ 82 (155)
T d1ufha_ 3 MLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEPE 82 (155)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECTT
T ss_pred EEEeCCHHHHHHHHHHHHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEEEEEEcCCeEEEEEEEEeecc
Confidence 5899999999999999743221 11110 01122232222 1 234445789999999887543
Q ss_pred -CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHH
Q 006709 510 -KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 510 -~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~ 584 (634)
....++|..++|+|+|||||+|+.|| +.+++.+++.|++.+.+.+ .++.+
T Consensus 83 ~~~~~~~i~~~~v~~~~rg~Gig~~ll-------------------------~~~~~~~~~~g~~~i~l~v~~~N~~a~~ 137 (155)
T d1ufha_ 83 HPQQEAFIYDFGLYEPYRGKGYAKQAL-------------------------AALDQAARSMGIRKLSLHVFAHNQTARK 137 (155)
T ss_dssp CTTCEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEECCCTTCHHHHH
T ss_pred CCCCceEEEEEEEEHHHcCCcccchHH-------------------------HHHHHHhhhcCCceeEEEEcCCCHHHHH
Confidence 24678999999999999999999999 8999999999999999988 46899
Q ss_pred HHHhCCCeecccccc
Q 006709 585 WFKSRGFRECSIEMI 599 (634)
Q Consensus 585 ~Y~k~GF~~~~~~~~ 599 (634)
||+|+||+++++.|.
T Consensus 138 ~y~k~GF~~~g~~m~ 152 (155)
T d1ufha_ 138 LYEQTGFQETDVVMS 152 (155)
T ss_dssp HHHHTTCCCCCCCCC
T ss_pred HHHHCCCEEEeEEEE
Confidence 999999999987653
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.52 E-value=4.9e-14 Score=128.14 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=72.2
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.+++++.+|++||++...+.. ...+|..++|+|+|||||+|++|| +++++.|+
T Consensus 38 ~~~v~d~~g~ivG~~~~~~~~--~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~ 90 (137)
T d2g3aa1 38 NITIRNDDNSVTGGLVGHTAR--GWLYVQLLFVPEAMRGQGIAPKLL-------------------------AMAEEEAR 90 (137)
T ss_dssp EEEEECTTCCEEEEEEEEEET--TEEEEEEEECCGGGCSSSHHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEeCCCCEEEEEEEEEeC--CeEEEEEEEEChhhcCCChHHHHH-------------------------HHHHHHHH
Confidence 456666789999999888653 578999999999999999999999 99999999
Q ss_pred HcCCcEEEEec--HHhHHHHHhCCCeeccc
Q 006709 569 SLGLDMLFLLT--TRTADWFKSRGFRECSI 596 (634)
Q Consensus 569 ~~g~~~l~l~t--~~a~~~Y~k~GF~~~~~ 596 (634)
+.|+..+++.+ +.|.+||+|+||++++.
T Consensus 91 ~~g~~~i~l~~~n~~a~~fY~k~GF~~~g~ 120 (137)
T d2g3aa1 91 KRGCMGAYIDTMNPDALRTYERYGFTKIGS 120 (137)
T ss_dssp HTTCCEEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HcCCceEEEecccHhhHHHHHhCCCEEEEE
Confidence 99999999987 57999999999999875
|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YitI species: Bacillus licheniformis [TaxId: 1402]
Probab=99.50 E-value=6.8e-14 Score=128.63 Aligned_cols=83 Identities=20% Similarity=0.238 Sum_probs=73.1
Q ss_pred EEEEEECCeEEEEEEEeeec-----CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHH
Q 006709 490 FYVVEREGQIIACAALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIE 564 (634)
Q Consensus 490 ~~V~~~~g~iiG~~~l~~~~-----~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 564 (634)
.+++..++++|||+.+.+.. ....++|..++|+|+|||+|+|++|| ++++
T Consensus 40 h~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V~~~~rg~GiG~~Ll-------------------------~~~~ 94 (145)
T d2jdca1 40 HLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLI-------------------------KHAE 94 (145)
T ss_dssp EEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEECTTSTTSSHHHHHH-------------------------HHHH
T ss_pred EEEEEeCCEEEEEEEEEeccccccCCCCeEEEEEEEEeHHHhhhhHHHHHH-------------------------HHHH
Confidence 47889999999999987542 23557899999999999999999999 9999
Q ss_pred HHHHHcCCcEEEEec-HHhHHHHHhCCCeecccc
Q 006709 565 KKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 565 ~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
++|++.|++.+++.+ ..|.+||+++||+.++..
T Consensus 95 ~~a~~~g~~~i~l~a~~~A~~fY~k~GF~~~g~~ 128 (145)
T d2jdca1 95 EILRKRGADLLWCNARTSASGYYKKLGFSEQGEV 128 (145)
T ss_dssp HHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEE
T ss_pred HHHHHcCCCEEEEeccchHHHHHHHCCCEEeCcE
Confidence 999999999999987 579999999999998853
|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.6e-14 Score=131.32 Aligned_cols=122 Identities=21% Similarity=0.269 Sum_probs=94.1
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC---ccCCHHHHHhhc---C---cE--------EEEEECCeEEEEEEEeeecCC-
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL---D---SF--------YVVEREGQIIACAALFPFFKE- 511 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~---~~~~~~~~~~~l---~---~~--------~V~~~~g~iiG~~~l~~~~~~- 511 (634)
.||+|+++|++.|.+|++.+...... ...+.+++.... . .. +++..+++++|++.+.+....
T Consensus 3 ~IR~at~~D~~~i~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~ 82 (167)
T d2b5ga1 3 VIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPW 82 (167)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEETT
T ss_pred EEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhccccchhhhhhhhccCceeEEeeCCeEEEEEEEEeecccc
Confidence 59999999999999998875432211 234566665543 1 11 223346899999988764432
Q ss_pred --CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHH
Q 006709 512 --KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADW 585 (634)
Q Consensus 512 --~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~ 585 (634)
...++..++|+|+|||||+|++|+ ++++++|++.|+..|.+.+ ++|++|
T Consensus 83 ~~~~~~i~~l~v~~~~rg~Gig~~L~-------------------------~~l~~~a~~~g~~~i~l~v~~~N~~A~~f 137 (167)
T d2b5ga1 83 IGKLLYLEDFFVMSDYRGFGIGSEIL-------------------------KNLSQVAMRCRCSSMHFLVAEWNEPSINF 137 (167)
T ss_dssp TEEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHTCSEEEEEEETTCHHHHHH
T ss_pred cccceecceeeeeeccccCCCchhhh-------------------------hhhhhhhcccCcceeeeecccCcHHHHHH
Confidence 346788999999999999999999 9999999999999999988 579999
Q ss_pred HHhCCCeeccc
Q 006709 586 FKSRGFRECSI 596 (634)
Q Consensus 586 Y~k~GF~~~~~ 596 (634)
|+++||+..+.
T Consensus 138 Y~k~GF~~~~~ 148 (167)
T d2b5ga1 138 YKRRGASDLSS 148 (167)
T ss_dssp HHTTTCEEHHH
T ss_pred HHHCCCEECcE
Confidence 99999998654
|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase PA4026 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=3.8e-14 Score=128.97 Aligned_cols=121 Identities=21% Similarity=0.203 Sum_probs=92.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhh----c---C---cEEEEEECCeEEEEEEEeeecC----CCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L---D---SFYVVEREGQIIACAALFPFFK----EKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~----l---~---~~~V~~~~g~iiG~~~l~~~~~----~~~~ 514 (634)
++||.|+.+|+++|.+|+..+..... .+...+..... + + .+++++.++++||++.+.+... ...+
T Consensus 1 M~Ir~a~~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 79 (153)
T d2euia1 1 MRIVQATLEHLDLLAPLFVKYREFYG-MLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVW 79 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHhCCCCcEEEEEEecCCeEEEEEeeecccccccccceE
Confidence 47999999999999999876543211 11122222221 1 1 2344557899999998875432 2447
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..++|+|++||+|+|++|+ ++++++|++.|++.+.+.+ .+|.+||+++|
T Consensus 80 ~i~~~~V~~~~r~~Gig~~Ll-------------------------~~~~~~ak~~g~~~i~l~~~~~N~~a~~~Y~k~G 134 (153)
T d2euia1 80 ILNDIYVAEEARRQLVADHLL-------------------------QHAKQMARETHAVRMRVSTSVDNEVAQKVYESIG 134 (153)
T ss_dssp EEEEEEECTTSCHHHHHHHHH-------------------------HHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTT
T ss_pred EecceeeeecccCcchhhHHH-------------------------HHHhhhHHHhhhccceEEecCCCHHHHHHHHHCC
Confidence 899999999999999999999 9999999999999999998 57999999999
Q ss_pred Ceecc
Q 006709 591 FRECS 595 (634)
Q Consensus 591 F~~~~ 595 (634)
|++..
T Consensus 135 F~~~~ 139 (153)
T d2euia1 135 FREDQ 139 (153)
T ss_dssp CBCCC
T ss_pred CEEcc
Confidence 98743
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HPA2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.48 E-value=5.8e-14 Score=127.11 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=91.7
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHh---hc----C----cEEEEEECCeEEEEEEEeeecC----CCe
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---AL----D----SFYVVEREGQIIACAALFPFFK----EKC 513 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~---~l----~----~~~V~~~~g~iiG~~~l~~~~~----~~~ 513 (634)
.+||+++++|.+.+.+|++.+.... ....+.+.... .+ . .+++++.++.+||++.+.+... ...
T Consensus 3 i~IR~~~~~D~e~~~~L~~~y~~fy-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~~~~~ 81 (150)
T d1qsma_ 3 ITVRFVTENDKEGWQRLWKSYQDFY-EVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKDK 81 (150)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSCE
T ss_pred eEEEECCHHHHHHHHHHHHHHHHHh-cccCchHHHHHHHHHHhCCCcccceeeeehhhcCcEEEEEEEeeccccccccch
Confidence 4699999999999999987654321 11222322221 11 1 2333445689999998875433 245
Q ss_pred EEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhC
Q 006709 514 GEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSR 589 (634)
Q Consensus 514 ~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~ 589 (634)
++|..++|+|++||+|+|++|+ +++++.|+++|++.|.+.+ ++|++||+|+
T Consensus 82 ~~l~~l~v~~~~rg~GiG~~L~-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 136 (150)
T d1qsma_ 82 IYINDLYVDENSRVKGAGGKLI-------------------------QFVYDEADKLGTPSVYWCTDESNHRAQLLYVKV 136 (150)
T ss_dssp EEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHH
T ss_pred heehhhhhhhcccCccHHHHHH-------------------------HHHHhhhcccccccceeEEccCCHHHHHHHHHc
Confidence 7899999999999999999999 9999999999999999999 4799999999
Q ss_pred CCeecc
Q 006709 590 GFRECS 595 (634)
Q Consensus 590 GF~~~~ 595 (634)
||+...
T Consensus 137 GFk~~~ 142 (150)
T d1qsma_ 137 GYKAPK 142 (150)
T ss_dssp EEECSE
T ss_pred CCCCcC
Confidence 998654
|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2290 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.48 E-value=2.1e-13 Score=124.73 Aligned_cols=143 Identities=15% Similarity=0.262 Sum_probs=105.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----ccCCHHHHHhhc-------CcEEEEEECCeEEEEEEEeeecCCC---eE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEK---CG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~~~~~~~~~~~l-------~~~~V~~~~g~iiG~~~l~~~~~~~---~~ 514 (634)
.+||+++++|++.+.+++......... ...+.+...+.+ ..+++++.++++||++.+.+..... .+
T Consensus 3 i~iR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 82 (164)
T d2ge3a1 3 VTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHCG 82 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTEE
T ss_pred EEEEECCHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHhhcCCceEEEEEECCEEEEEEEeeccccCCcCcEE
Confidence 369999999999999998776543221 222444443333 3688999999999999998654432 35
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
++ .++|+|+|||+|+|+.|+ ..++++|++.|++.+.+.+ ..+.+||+++|
T Consensus 83 ~~-~~~v~~~~rg~Gig~~l~-------------------------~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k~G 136 (164)
T d2ge3a1 83 TL-GMGILPAYRNKGLGARLM-------------------------RRTLDAAHEFGLHRIELSVHADNARAIALYEKIG 136 (164)
T ss_dssp EE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHT
T ss_pred EE-EEEeChhhccccccccch-------------------------hhhhheeccccccccccccCcchHHHHHHHHHCC
Confidence 55 789999999999999999 8899999999999999988 56999999999
Q ss_pred CeecccccchhHhhhhccCCCCceEEEeecC
Q 006709 591 FRECSIEMIPEERRKRINLSRNSKYYMKKLL 621 (634)
Q Consensus 591 F~~~~~~~~~~~~~~~~~~~~~s~~~~k~l~ 621 (634)
|+..++.. +.. .++......++|-.|+
T Consensus 137 F~~~g~~~--~~~--~~~g~~~D~~~~~~l~ 163 (164)
T d2ge3a1 137 FAHEGRAR--DAV--SIDGHYIDSLNMAIIF 163 (164)
T ss_dssp CEEEEEEE--EEE--ESSSCEEEEEEEEEEC
T ss_pred CEEEEEEe--cEE--EECCEEEEEEEEEEec
Confidence 99877532 111 1233333557775553
|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2161 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.47 E-value=1.8e-13 Score=123.50 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=80.3
Q ss_pred CccCCHHHHHhhcC---cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhccccccccccccc
Q 006709 475 LVRRTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHI 551 (634)
Q Consensus 475 ~~~~~~~~~~~~l~---~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~ 551 (634)
..+++.+.....+. .++++..+|++||++.+.. .....++|..++|+|+|||||+|++|+
T Consensus 23 ~~~~s~e~~~~~l~~s~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~p~~rg~GiG~~Ll---------------- 85 (133)
T d1y7ra1 23 MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSYQGQAYGSLIM---------------- 85 (133)
T ss_dssp CCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGGCSSSHHHHHH----------------
T ss_pred cCCCCHHHHHHHhcCCeEEEEEEECCEEEEEEEEEe-ccCCEEEEEEEEEeecccchHHHHHHH----------------
Confidence 34567777777663 5677889999999998873 456789999999999999999999999
Q ss_pred ccCCCcchHHHHHHHHHHcCCcEEEEec---HHhHHHHHhCCCeeccc
Q 006709 552 STNGFPFLRDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSI 596 (634)
Q Consensus 552 ~~~~~~~~~~~i~~~a~~~g~~~l~l~t---~~a~~~Y~k~GF~~~~~ 596 (634)
+++++++++.|++.+++.+ +.+..||+|+||++++.
T Consensus 86 ---------~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~~ 124 (133)
T d1y7ra1 86 ---------EHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp ---------HHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred ---------HHHHHHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeCC
Confidence 9999999999998776654 56999999999998754
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.46 E-value=2.4e-13 Score=124.04 Aligned_cols=86 Identities=22% Similarity=0.366 Sum_probs=72.3
Q ss_pred cEEEEE-ECCeEEEEEEEeeecC----CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHH
Q 006709 489 SFYVVE-REGQIIACAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563 (634)
Q Consensus 489 ~~~V~~-~~g~iiG~~~l~~~~~----~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i 563 (634)
.++++. .+|++|||+.+.+... ...++|..|+|+|+|||||+|++|| +++
T Consensus 53 ~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~~~~Rg~GiG~~Ll-------------------------~~~ 107 (149)
T d1vkca_ 53 KFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALL-------------------------RKA 107 (149)
T ss_dssp EEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHH-------------------------HHH
T ss_pred eEEEEEecCCeEEEEEEEEeccCCCCCCcEEEEEEEEECHHHcCCChHHHHH-------------------------HHH
Confidence 355555 4689999998865432 3558999999999999999999999 999
Q ss_pred HHHHHHcCCcEEEEec---HHhHHHHHhCCCeecccccc
Q 006709 564 EKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIEMI 599 (634)
Q Consensus 564 ~~~a~~~g~~~l~l~t---~~a~~~Y~k~GF~~~~~~~~ 599 (634)
++++++.|++.+.|.| .+|.+||+++||+..+..|.
T Consensus 108 ~~~a~~~g~~~i~L~v~~~n~A~~~Y~k~GF~~~~~~m~ 146 (149)
T d1vkca_ 108 EEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALIME 146 (149)
T ss_dssp HHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCCCC
T ss_pred HHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEEE
Confidence 9999999999999988 35899999999998776653
|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.9e-13 Score=122.45 Aligned_cols=123 Identities=23% Similarity=0.255 Sum_probs=91.8
Q ss_pred cccccCccchHHHHHHhHHHHHHc---ccCccCCHHHHHhhc------CcE--------EEEEECCeEEEEEEEeeecC-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFFK- 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~---~~~~~~~~~~~~~~l------~~~--------~V~~~~g~iiG~~~l~~~~~- 510 (634)
..||+++++|++.|.+|++.+... .....++.+.+...+ ... .+....+.++|++.+.+...
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (167)
T d2beia1 2 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 81 (167)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHhhccccchhhhhhhhcccccceeecceeeeEEEeeccccc
Confidence 369999999999999998765321 222445667665543 111 22334678899887765432
Q ss_pred --CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHH
Q 006709 511 --EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 --~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~ 584 (634)
....++..++|+|+|||+|+|++|+ ++++++|++.|++.|.+.+ .+|+.
T Consensus 82 ~~~~~~~i~~~~v~~~~rg~GiG~~L~-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~A~~ 136 (167)
T d2beia1 82 WKGRTIYLEDIYVMPEYRGQGIGSKII-------------------------KKVAEVALDKGCSQFRLAVLDWNQRAMD 136 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHTTCCEEEEEEETTCHHHHH
T ss_pred ccccceeccceecCHhhcCCCcchhhH-------------------------HHHHHHHhhhcccccceeeccCCHHHHH
Confidence 2457888999999999999999999 9999999999999999988 47999
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
||+++||++.+.
T Consensus 137 ~Y~k~GF~~~~~ 148 (167)
T d2beia1 137 LYKALGAQDLTE 148 (167)
T ss_dssp HHHHTTCEEHHH
T ss_pred HHHHCCCEEccE
Confidence 999999999753
|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH1933 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.44 E-value=3.7e-13 Score=121.64 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=87.8
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccC-CHHHHH--------hhcCcEEEEEECCeEEEEEEEeeec-----CCCeE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELL--------KALDSFYVVEREGQIIACAALFPFF-----KEKCG 514 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~--------~~l~~~~V~~~~g~iiG~~~l~~~~-----~~~~~ 514 (634)
..+|+++.+|++.|.+++............ ..+... ..-..++|++.+++++|++.+.+.. ....+
T Consensus 7 ~~i~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vg~~~~~~~~~~~~~~~~~~ 86 (157)
T d1wwza1 7 EKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVG 86 (157)
T ss_dssp EECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEEE
T ss_pred EecccCCHHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhCCCCeEEEEEECCEEEEEEEeeccccccccCCcEE
Confidence 357888888888888876543322111111 111111 1124689999999999999886431 12457
Q ss_pred EEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 515 EVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 515 ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
+|..|+|+|+|||+|+|++|+ .+++++|++.|... .+.+ .+|.+||+|+|
T Consensus 87 ~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a~~~~~~~-~~~v~~~N~~a~~~Y~k~G 140 (157)
T d1wwza1 87 AIHEFVVDKKFQGKGIGRKLL-------------------------ITCLDFLGKYNDTI-ELWVGEKNYGAMNLYEKFG 140 (157)
T ss_dssp EEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHTTCSEE-EEEEETTCHHHHHHHHHTT
T ss_pred EEEEEEEEehhccchhHHHHH-------------------------HHHHHHHHHhCCce-EEEEcCCCHHHHHHHHHCC
Confidence 899999999999999999999 88889999888654 4444 47999999999
Q ss_pred Ceeccc
Q 006709 591 FRECSI 596 (634)
Q Consensus 591 F~~~~~ 596 (634)
|++++.
T Consensus 141 F~~~g~ 146 (157)
T d1wwza1 141 FKKVGK 146 (157)
T ss_dssp CEEEEE
T ss_pred CEEEeE
Confidence 999874
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.44 E-value=6.8e-13 Score=125.24 Aligned_cols=110 Identities=29% Similarity=0.546 Sum_probs=88.8
Q ss_pred ccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcCcEEEEEECCeEEEEEEEeeec--------------CCCeEEEE
Q 006709 452 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF--------------KEKCGEVA 517 (634)
Q Consensus 452 R~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~~~g~iiG~~~l~~~~--------------~~~~~ei~ 517 (634)
+...+.|.+.+..++.++.. ..+......+||++.+|+|||++.+.+.. ....++|.
T Consensus 40 ~~~~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~ 110 (182)
T d2gana1 40 RKPNPNDFNGFREVYEPFLK---------FRLSQEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIE 110 (182)
T ss_dssp SCCCTTCHHHHHHHHHHHHH---------HHHHTTCSEEEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHH---------HHhcCCcceEEEEEECCEEEEEEEEeccCcccccccccccccCCCCEEEEE
Confidence 45678899988888765443 23344456799999999999999987432 23568999
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
.|+|+|+|||||||++|| +.+++.|++.|++ +.+.+ ..|..||+|+||++
T Consensus 111 ~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~ak~~G~~-~~l~~~~~n~~a~~fY~k~GF~~ 164 (182)
T d2gana1 111 FFVVDPEFQGKGIGSTLL-------------------------EFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKGFRE 164 (182)
T ss_dssp EEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHTTCE-EEEEECGGGSHHHHHHHTTTEEE
T ss_pred EEEECHhhcCCCHHHHHH-------------------------HHHHHHHHHcCCe-EEEEEccCCHHHHHHHHHCCCEE
Confidence 999999999999999999 9999999999987 55555 36899999999999
Q ss_pred ccc
Q 006709 594 CSI 596 (634)
Q Consensus 594 ~~~ 596 (634)
+..
T Consensus 165 ~~~ 167 (182)
T d2gana1 165 IMR 167 (182)
T ss_dssp EEC
T ss_pred eeE
Confidence 764
|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable spermine/spermidine acetyltransferase EF1086 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.43 E-value=1.4e-13 Score=124.89 Aligned_cols=121 Identities=12% Similarity=0.072 Sum_probs=89.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCC
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 524 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~ 524 (634)
..||+++++|++.+.+|........+. ....+.+.+.. ..++++..++++||++.+.+. .+..++|..++|+|+
T Consensus 3 i~ir~~t~~d~~~i~~l~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~~~~vG~~~~~~~-~~~~~~i~~~~v~~~ 80 (146)
T d2fl4a1 3 IHFEKVTSDNRKAVENLQVFAEQQAFI-ESMAENLKESDQFPEWESAGIYDGNQLIGYAMYGRW-QDGRVWLDRFLIDQR 80 (146)
T ss_dssp CCCCCCCTTTHHHHHTCCCTTCHHHHH-HHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC-TTSCEEEEEEEECGG
T ss_pred EEEEECCHHHHHHHHHHHccccchhhh-hhHHHHHHHHhhCCCeEEEEEEECCEEEEEEEEEEc-CCCeEEEeeEEEcHH
Confidence 469999999999998873211111111 00111122211 257788899999999999864 456788999999999
Q ss_pred CcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 525 CRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 525 ~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
|||||+|++|+ +.+.+.+ +..+++.+.+.+ .+|.+||+|+||+..+.
T Consensus 81 ~rgkGiG~~ll-------------------------~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~ 132 (146)
T d2fl4a1 81 FQGQGYGKAAC-------------------------RLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGE 132 (146)
T ss_dssp GTTSSHHHHHH-------------------------HHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEE
T ss_pred HcCCChhhhhh-------------------------hhhccccccccCceEEEeecccccHHHHHHHHHCCCEEeeE
Confidence 99999999999 7776655 556999999987 46999999999999874
|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YjcF species: Bacillus subtilis [TaxId: 1423]
Probab=99.40 E-value=9.3e-13 Score=120.27 Aligned_cols=81 Identities=25% Similarity=0.322 Sum_probs=74.1
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++|+..++++|||+.+.+ .+..++|..++|+|+|||+|+|++|| +++++.++
T Consensus 43 ~h~v~~~~~~~vg~~~~~~--~~~~~~i~~l~V~~~~rg~GiG~~Ll-------------------------~~~~~~a~ 95 (140)
T d1q2ya_ 43 EHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRSAGVGGIIM-------------------------KALEKAAA 95 (140)
T ss_dssp EEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTTTTHHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEeccccEEEEEeeec--ccceeeEeeeEEchhhcCCcHHHHHH-------------------------HHHHHHHH
Confidence 5688899999999999985 34789999999999999999999999 99999999
Q ss_pred HcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 569 SLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 569 ~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
+.|++.+++.+ +.|..||+|+||+.++.
T Consensus 96 ~~g~~~i~l~a~~~a~~fY~k~GF~~~~~ 124 (140)
T d1q2ya_ 96 DGGASGFILNAQTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp HTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred HcCCCceEEeCCHHHHHHHHHCcCEEcCC
Confidence 99999999988 67999999999999874
|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.38 E-value=1.9e-11 Score=125.36 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=127.9
Q ss_pred eEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCC------ccc------------------
Q 006709 101 TFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGH------EAK------------------ 155 (634)
Q Consensus 101 ~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~------~~~------------------ 155 (634)
+.|.|+||+.+.+.+ ++++++-|..-.+.+.++|+|.++-.-++..|.+... ...
T Consensus 1 ~tV~KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L~~~~~~a~~~~~~~~~~~~l~~i~~~h~~~i~ 80 (302)
T d2hmfa1 1 TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVRDIAKVGDFIKFIREKHYKAIE 80 (302)
T ss_dssp CEEEEECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhcCCCEEEEEeCCCCChhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 479999999999865 7888887776666677888888875444433322110 000
Q ss_pred -ccCC---------------------------ccCCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCccee
Q 006709 156 -YLGR---------------------------YRITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHE 206 (634)
Q Consensus 156 -~~~G---------------------------~RvT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~a 206 (634)
.... ..-.++...+.+ .+.|+. ...|++. .|++.|++ +
T Consensus 81 ~l~~~~~~~~~~~~~i~~~l~~L~~~l~~~~~~~e~~~~~~D~i-ls~GE~lSa~lla~--------~L~~~Gi~----a 147 (302)
T d2hmfa1 81 EAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYI-LSFGERLSSPILSG--------AIRDLGEK----S 147 (302)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHH-HTHHHHHHHHHHHH--------HHHHTTCC----E
T ss_pred HHhccHhHHHHHHHHHHHHHHHHHHHHHHhhhcccCCHHHHHHH-hhhhhhHHhHHHHH--------HHHHcCCc----e
Confidence 0000 000111122222 222332 2344444 47888987 5
Q ss_pred EEeeccCCceeeeeecccccCccccccceEEEec-HHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHH
Q 006709 207 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACAL 281 (634)
Q Consensus 207 v~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~~vd-~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~ 281 (634)
..+...+-.+++.. .++. ..+.... .+.+..+++.+.|||+.+. +.+.+|++..+ .+|..|+.+|.
T Consensus 148 ~~ld~~~~~i~t~~--------~~~~-a~~~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLgRgGSD~tA~~la~ 218 (302)
T d2hmfa1 148 IALEGGEAGIITDN--------NFGS-ARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGY 218 (302)
T ss_dssp EEECTTTTTEEECS--------CTTS-CCEEEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECCTTTHHHHHHHHHH
T ss_pred EEeeccccccccCC--------ccch-hhhhhhhhHHHHHHHHhcCCeEEeecccccCCCCCEEEEeccCcccHHHHHHH
Confidence 55555543333322 1221 2233333 3668889999999999985 67788887765 68999999999
Q ss_pred HcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhc
Q 006709 282 AIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 282 aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~ 320 (634)
+|+|+.+.+.|||+|+ | +++++|+.++.+|+.++...|+
T Consensus 219 ~l~A~~~~i~tdv~gi~~~dP~~~~~a~~~~~~~y~ea~eLa~~g~ 264 (302)
T d2hmfa1 219 GLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGA 264 (302)
T ss_dssp HHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTC
T ss_pred HhccHHHHHHhccchhccchhhcCCCceEecccCHHHHHHHHhCCC
Confidence 9999999999999997 3 4689999999999999875543
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Probab=99.37 E-value=1.5e-12 Score=120.38 Aligned_cols=83 Identities=29% Similarity=0.410 Sum_probs=75.2
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH
Q 006709 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a 567 (634)
..+||++.+|++||++.+.+ ..+..++|..++|+|+|||+|+|++|+ +++++.|
T Consensus 35 ~~~~v~~~~g~ivG~~~~~~-~~~~~~~i~~l~V~p~~rg~GiG~~Ll-------------------------~~~~~~a 88 (152)
T d1y9ka1 35 GLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGIGKKLL-------------------------RHAVETA 88 (152)
T ss_dssp SEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHH
T ss_pred CeEEEEEECCEEEEEEEEEE-cCCCEEEEEEEEEcHHHCCCCcchHHH-------------------------HHHHHHH
Confidence 46889999999999998874 456789999999999999999999999 9999999
Q ss_pred HHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 568 ASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 568 ~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
++.|+..+.+.| .+|.+||+++||+.++.
T Consensus 89 ~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~~~ 121 (152)
T d1y9ka1 89 KGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSI 121 (152)
T ss_dssp HHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred HHcCCceEEEEeccCCHHHHHHHHHCCCEEEeE
Confidence 999999999987 46899999999999876
|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YvbK (BSu33890) species: Bacillus subtilis [TaxId: 1423]
Probab=99.37 E-value=2.3e-12 Score=119.27 Aligned_cols=84 Identities=21% Similarity=0.294 Sum_probs=76.8
Q ss_pred CcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH
Q 006709 488 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA 567 (634)
Q Consensus 488 ~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a 567 (634)
..+||++.+|++||++.+.+. .+..+++..++|+|+|||||+|++|+ +++.++|
T Consensus 35 ~~~~v~~~~g~ivG~~~~~~~-~~~~~~l~~i~V~p~~rg~Gig~~Ll-------------------------~~~~~~a 88 (152)
T d1yvka1 35 GECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLV-------------------------LDAIEKA 88 (152)
T ss_dssp SEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHHHH-------------------------HHHHHHH
T ss_pred CeEEEEEECCEEEEEEEEEec-CCCEEEEEEeeeCHhHcCCCcccHHH-------------------------HHHHHHh
Confidence 478999999999999999864 56789999999999999999999999 9999999
Q ss_pred HHcCCcEEEEec----HHhHHHHHhCCCeecccc
Q 006709 568 ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 568 ~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~~ 597 (634)
++.|++.+++.| ..|.+||+++||+.+++.
T Consensus 89 ~~~g~~~~~l~~~~~n~~a~~fYek~GF~~~~~~ 122 (152)
T d1yvka1 89 KKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAID 122 (152)
T ss_dssp HHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred hhhcccccceeeccCCHHHHHHHHHCCCEEEEEE
Confidence 999999999988 468999999999998864
|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 3-N-acetyltransferase species: Serratia marcescens [TaxId: 615]
Probab=99.36 E-value=6.3e-13 Score=118.10 Aligned_cols=116 Identities=13% Similarity=0.161 Sum_probs=85.0
Q ss_pred ccccCccchHHHHHHhHHHHHHcc------cCccCCHHHHHhhc---C-cEEEEEECCeEEEEEEEeeec----CCCeEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKAL---D-SFYVVEREGQIIACAALFPFF----KEKCGE 515 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~------~~~~~~~~~~~~~l---~-~~~V~~~~g~iiG~~~l~~~~----~~~~~e 515 (634)
+++.+.++|++.+..++..+.+.- ...+.+.+.+...+ . .+++++.++++||++.+.++. ....++
T Consensus 4 ~~~r~~P~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~ 83 (137)
T d1bo4a_ 4 RTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSEIY 83 (137)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEEEE
T ss_pred EEEeCCHhhHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEEECCeeeeecccccccCccCCCCEEE
Confidence 456667778887777654332211 11222344444433 2 467788999999999876543 234578
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCC
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 590 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~G 590 (634)
|..|+|+|+|||+|+|++|+ +++++++++.|++.|++.+ .+|.+||+++|
T Consensus 84 i~~l~V~p~~Rg~Gig~~Ll-------------------------~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G 137 (137)
T d1bo4a_ 84 IYDLAVSGEHRRQGIATALI-------------------------NLLKHEANALGAYVIYVQADYGDDPAVALYTKLG 137 (137)
T ss_dssp EEEEEECTTSTTSSHHHHHH-------------------------HHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEcHHHhhhchhhHHH-------------------------HHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence 99999999999999999999 9999999999999999999 36888999987
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.34 E-value=2.5e-12 Score=112.49 Aligned_cols=102 Identities=25% Similarity=0.237 Sum_probs=76.6
Q ss_pred cccCccchHHHHHHhHH---HHHHcc-cCccCCH-------HHHHhhc----CcEEEEEECCeEEEEEEEeeecCCCeEE
Q 006709 451 TRTAKVTDLSGIKQIIQ---PLVESG-ALVRRTD-------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE 515 (634)
Q Consensus 451 iR~a~~~D~~~i~~l~~---~~~~~~-~~~~~~~-------~~~~~~l----~~~~V~~~~g~iiG~~~l~~~~~~~~~e 515 (634)
||+++.+|.+.|.+|.. .+.+.. .....+. +.+...+ ..+||++.+|++|||+.+.+......++
T Consensus 1 IR~~~kdd~~~I~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~ 80 (118)
T d2aj6a1 1 MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVN 80 (118)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred CCcCChhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHhhcCCCcEEEEEEECCEEEEEeeeccccCCCeEE
Confidence 68999999888877643 222221 1112111 1222222 2689999999999999988766677899
Q ss_pred EEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEE
Q 006709 516 VAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFL 577 (634)
Q Consensus 516 i~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l 577 (634)
|..|+|+|+|||+|+|++|| ++++++|++.|+++|.+
T Consensus 81 i~~l~V~~~~RgkGiG~~Ll-------------------------~~~~~~a~~~g~~~i~~ 117 (118)
T d2aj6a1 81 IELLYVEPQFRKLGIATQLK-------------------------IALEKWAKTMNAKRISN 117 (118)
T ss_dssp EEEEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCSCCCC
T ss_pred EEEEEEchhhccCHHHHHHH-------------------------HHHHHHHHHhCCCEEEe
Confidence 99999999999999999999 99999999999987643
|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.28 E-value=7.9e-11 Score=120.68 Aligned_cols=114 Identities=17% Similarity=0.212 Sum_probs=82.5
Q ss_pred hHHhcCCCCcceeEEeeccCCceeeeeecccccCccccccceEE-----EecHHHHHHHHcCCcEEEEcCC-ccC-CCCc
Q 006709 194 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVK-----KVDVTRMRERLDGGCLVILSNL-GYS-SSGE 266 (634)
Q Consensus 194 ~L~~~Gi~~~~~av~l~~~dg~~l~ak~~g~~~g~d~g~~G~v~-----~vd~~~I~~LLd~G~IPVv~~v-~~~-~~Ge 266 (634)
.|++.|++ +..+...+-.+++.. +++. +++. ......+..+++.+.|||+.+. +.+ .+|+
T Consensus 134 ~L~~~gi~----a~~~d~~~~~iit~~--------~~~~-a~~~~~~~~~~~~~~~~~~~~~~~v~vv~Gfig~~~~~G~ 200 (304)
T d2cdqa1 134 YLNTIGVK----ARQYDAFEIGFITTD--------DFTN-GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGA 200 (304)
T ss_dssp HHHHTTCC----EEEECGGGTTCEECS--------CSTT-CCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCC
T ss_pred HHHHcCCc----eEEEeeccccccccc--------cccc-ccccccchhhhHHHHhhhhhccCcEEEeeccccccCcCCc
Confidence 48899988 566655553344432 1221 1111 1123445667899999999985 555 5788
Q ss_pred eeee---chHHHHHHHHHHcCCCEEEEeeccccc---C----CCCccccccCHHHHHHHHHhhc
Q 006709 267 VLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 267 i~ni---d~D~lAa~LA~aL~AdkLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~ 320 (634)
+..+ .+|..|+.+|.+|+|+.+.+.|||||+ | +++++|++|+.+|+.+|..-|+
T Consensus 201 ~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~v~~a~~i~~lsy~EA~ela~~Ga 264 (304)
T d2cdqa1 201 VTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGA 264 (304)
T ss_dssp EEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHHS
T ss_pred eeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccccCCceEcCccCHHHHHHHHhCCC
Confidence 7765 689999999999999999999999997 4 4699999999999999865443
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=99.26 E-value=1.1e-11 Score=124.63 Aligned_cols=118 Identities=19% Similarity=0.341 Sum_probs=92.9
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC------CCeEEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAIGV 521 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~------~~~~ei~~l~V 521 (634)
+||+|+++|++++.+|+......... ..+.+.+.+ +.++|++.+++|||++.+.|+.. -+.+.|..++|
T Consensus 3 ~~~ka~~~d~~~l~~l~~~~F~~~~~---~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 79 (283)
T d2ozga2 3 KYTKASQENIQQLGNILEQCFVMSFG---DSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGI 79 (283)
T ss_dssp EEEECCTTTHHHHHHHHHHHTTCCTT---HHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHcCCCcC---cHHHHHHHhcCCCEEEEEECCEEEEEEEEEEeeeeECCeeeeEeeEEEEEE
Confidence 68999999999999997655433221 123344434 47999999999999999987631 13478999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
+|+|||||+|++|| +.+.+.+++.|+....+.. .+..||+++||+.++.
T Consensus 80 ~p~~rg~G~~~~L~-------------------------~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 128 (283)
T d2ozga2 80 APEYRGDGAAIALI-------------------------QHTLQEISEQDIPISVLYP-ATQRLYRKAGYEQAGS 128 (283)
T ss_dssp CGGGTTSSHHHHHH-------------------------HHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred CcccccCChHHHHH-------------------------HHHHHHHHhcCceEEEccC-CccchHHcCCCeEece
Confidence 99999999999999 8888889899987666554 4578999999988654
|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA0115 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.22 E-value=1.2e-11 Score=114.11 Aligned_cols=118 Identities=20% Similarity=0.290 Sum_probs=86.8
Q ss_pred ccccCccchHHHHHHhHHHHH--HcccCccCCHHHHHhhc-----CcEEEEEECCeEEEEEEEeeec-CCCeEEEEEEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGV 521 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~--~~~~~~~~~~~~~~~~l-----~~~~V~~~~g~iiG~~~l~~~~-~~~~~ei~~l~V 521 (634)
++..++.+|+.++.+|-.... +++...+ ++ +.. ...+++..+|++|||+.+.|.. ......|..++|
T Consensus 8 ~f~el~~~el~~i~~lR~~VFv~EQ~~~~~----e~-D~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV 82 (149)
T d1xeba_ 8 HHADLTLKELYALLQLRTEVFVVEQKCPYQ----EV-DGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVS 82 (149)
T ss_dssp EGGGCCHHHHHHHHHHHHHHHTTTTTCCCC----SC-CSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEE
T ss_pred ehHHCCHHHHHHHHHHHHHheEecCCCCCC----CC-cCCcccCceEEEEEEeCCeEEEEEEEeeccccCCcEEEEEEEE
Confidence 456677788888888755443 2222111 11 111 2367788999999999998643 345688999999
Q ss_pred CCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCC-cEEEEec-HHhHHHHHhCCCeecccc
Q 006709 522 SPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGL-DMLFLLT-TRTADWFKSRGFRECSIE 597 (634)
Q Consensus 522 ~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~-~~l~l~t-~~a~~~Y~k~GF~~~~~~ 597 (634)
+|+|||+|+|++|| +++++.+++.+. ..|++.+ ..+..||+++||+.++..
T Consensus 83 ~~~~Rg~GiG~~L~-------------------------~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~GF~~~g~~ 135 (149)
T d1xeba_ 83 SSAARGQGLGHQLM-------------------------ERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV 135 (149)
T ss_dssp CGGGTTSSHHHHHH-------------------------HHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCC
T ss_pred ehhhhccChhHHHH-------------------------HHHHHHHHHhCCCCEEEEeChHHHHHHHHHCCCEECCCc
Confidence 99999999999999 777788877654 4577776 568999999999998854
|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=5e-10 Score=113.92 Aligned_cols=194 Identities=18% Similarity=0.172 Sum_probs=118.1
Q ss_pred CeEEEEECCccCCCCC-hHHHHHHHHHHHhCCCeEEEEeCchHHHHHHHHHcCCcccc-----------------cCCcc
Q 006709 100 GTFVVIISGEIVSSPY-LDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLSERGHEAKY-----------------LGRYR 161 (634)
Q Consensus 100 k~iVIKLGGsvL~~~~-l~~la~dIa~L~~~G~kvVLVHGGG~~I~~~l~~lg~~~~~-----------------~~G~R 161 (634)
.+||.|+||+.+.+.+ ++++++-| .+.+.++|||.++-.-++..|.+....... .....
T Consensus 1 ~~iV~KFGGTSv~~~~~i~~v~~ii---~~~~~~~vVVVSA~~gvTd~L~~~~~~~~~~~~~~~l~~i~~~h~~~~~~l~ 77 (292)
T d2j0wa1 1 EIVVSKFGGTSVADFDAMNRSADIV---LSDANVRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERLR 77 (292)
T ss_dssp CCEEEEECSGGGSSHHHHHHHHHHH---TSCTTEEEEEECCCTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CeEEEeeCccccCCHHHHHHHHHHH---HhcCCCeEEEEeCCCCCHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHhhh
Confidence 3689999999998854 55555443 345678888888755555444433211100 00000
Q ss_pred -------------------------CCCHHHHHHHHHHHhHH-HHHHHHhcCCCCchhhHHhcCCCCcceeEEeeccCCc
Q 006709 162 -------------------------ITDSESLAAAMEAAGGI-RMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGN 215 (634)
Q Consensus 162 -------------------------vT~~~~l~~~~~a~G~i-n~~Lv~~L~~~~~~~~L~~~Gi~~~~~av~l~~~dg~ 215 (634)
..++...+.+ .+.|+. ...|++. .|++.|++ +..+++.+-
T Consensus 78 ~~~~~~~~l~~~~~~l~~l~~~~~~~~s~~~~d~I-ls~GE~lSa~lla~--------~L~~~Gi~----a~~lda~~~- 143 (292)
T d2j0wa1 78 YPNVIREEIERLLENITVLAEAAALATSPALTDEL-VSHGELMSTLLFVE--------ILRERDVQ----AQWFDVRKV- 143 (292)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH-HHHHHHHHHHHHHH--------HHHTTSCC----EEECCGGGT-
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhhcccChHHHHHH-HhhhHHHhHHHHHH--------HHHhcCCC----ccccchhhe-
Confidence 0112222332 233443 3555555 47888988 555554442
Q ss_pred eeeeeecccccCccccccceE-----EEecHHHHHHHHcCCcEEEEcCC-ccCCCCceeee---chHHHHHHHHHHcCCC
Q 006709 216 FLAAKRKGVVDGVDYGATGEV-----KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEAD 286 (634)
Q Consensus 216 ~l~ak~~g~~~g~d~g~~G~v-----~~vd~~~I~~LLd~G~IPVv~~v-~~~~~Gei~ni---d~D~lAa~LA~aL~Ad 286 (634)
+++.. +++. ..+ .......+...++.+ |||+.+. +.+.+|++..+ .+|..|+.+|..|+|+
T Consensus 144 i~t~~--------~~~~-a~~~~~~~~~~~~~~~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~ 213 (292)
T d2j0wa1 144 MRTND--------RFGR-AEPDIAALAELAALQLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHAS 213 (292)
T ss_dssp CBBCS--------CTTS-CCBCHHHHHHHHHHHTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCS
T ss_pred eecCC--------cccc-ccchhhhhhhhhhhhhhhhhccc-ccccccccccccCCceEeeccCcccHHHHHHHHHhhcH
Confidence 22211 1110 011 011123333444555 8898874 67788988766 5899999999999999
Q ss_pred EEEEeeccccc---C----CCCccccccCHHHHHHHHHhhc
Q 006709 287 KLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 320 (634)
Q Consensus 287 kLI~LTDVdgl---d----~~gklI~~ls~~e~~~li~~~~ 320 (634)
.+.+-|||||+ | +++++|++|+.+|+.+|..-|+
T Consensus 214 ~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~EA~ela~~Ga 254 (292)
T d2j0wa1 214 RVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGA 254 (292)
T ss_dssp EEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHTTC
T ss_pred HHHHhccCcceeechhhcCCCceEcceeCHHHHHHHHhCCc
Confidence 99999999997 4 4689999999999999875544
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.16 E-value=1.2e-10 Score=116.92 Aligned_cols=121 Identities=12% Similarity=0.195 Sum_probs=92.5
Q ss_pred cccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc--CcEEEEEECCeEEEEEEEeeecC----C--CeEEEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK----E--KCGEVAAIG 520 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l--~~~~V~~~~g~iiG~~~l~~~~~----~--~~~ei~~l~ 520 (634)
.+||+++++|++++.+|+......... +...+.+...+ ..+|++.++|++||++.+.|+.- . +.+.|..++
T Consensus 3 ~~iR~l~~~d~~~i~~l~~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~ 81 (285)
T d2hv2a2 3 KRVKKMGKEEMKEMFDLVIYAFNQEPT-AERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 81 (285)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCCCCC-hhHHHHHHHhhccCcEEEEEECCEEEEEEEEEEeEEEECCeeeeEEEEEEEE
Confidence 369999999999999997644322111 11112222222 46889999999999999987531 1 347899999
Q ss_pred ECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 521 VSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 521 V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
|+|+|||+|+|++|+ +++.+.+++.|+..+.+.. .+..||+++||+.++.
T Consensus 82 v~p~~rg~G~~~~l~-------------------------~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 131 (285)
T d2hv2a2 82 SYPEYRGEGGISAIM-------------------------KEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 131 (285)
T ss_dssp ECTTCCSSCHHHHHH-------------------------HHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred ECHHHcCCChHHHHH-------------------------HHHHHHHHHhCCceeeeec-cchhhHhcCCcEEeee
Confidence 999999999999999 8888999999998887765 4578999999998754
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.15 E-value=8.2e-11 Score=118.33 Aligned_cols=122 Identities=15% Similarity=0.251 Sum_probs=91.6
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC----c-cCCHHHHHhh------cCcEEEEEECCeEEEEEEEeeecC----C--
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL----V-RRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK----E-- 511 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~----~-~~~~~~~~~~------l~~~~V~~~~g~iiG~~~l~~~~~----~-- 511 (634)
++||+++++|++++.+|+...+..... . ......+... ...+++++++|++||++.+.|+.- .
T Consensus 1 m~iR~~~~~d~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~ 80 (291)
T d2i00a2 1 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 80 (291)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHcCcccccchhcchhhhHHHHHhhccccccCcEEEEEECCEEEEEEEEEEeEEEECCeee
Confidence 368999999999999997643211100 0 0112222211 146889999999999999987641 1
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCC
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 591 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF 591 (634)
+.+.|..++|+|+|||||+|++|| +++.+.+++.|+....+.. .+..||+++||
T Consensus 81 ~~~~i~~v~v~p~~r~~G~~~~L~-------------------------~~~~~~~~~~~~~~~~l~~-~~~~~Y~~~Gf 134 (291)
T d2i00a2 81 KMGGVTGVGTYPEYANHGLMKDLI-------------------------QTALEEMRQDKQWISYLFP-YNIPYYRRKGW 134 (291)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHH-------------------------HHHHHHHHHTTCCEEEECC-SCHHHHHHTTC
T ss_pred eEEEEEEEEEchhhcCCChHHHHH-------------------------HHHHHHHHhcCCcEEEeec-cchhhHhcCCC
Confidence 347899999999999999999999 8888999999998777665 45789999999
Q ss_pred eeccc
Q 006709 592 RECSI 596 (634)
Q Consensus 592 ~~~~~ 596 (634)
+.++.
T Consensus 135 ~~~~~ 139 (291)
T d2i00a2 135 EIMSD 139 (291)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 98764
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.10 E-value=3e-10 Score=107.34 Aligned_cols=117 Identities=24% Similarity=0.288 Sum_probs=82.0
Q ss_pred ccccCccch-----HHHHHHhHHHHHHcccCccCCHHHHHhhcC-cEEEEEECCeEEEEEEEeeec---C---CCeEEEE
Q 006709 450 GTRTAKVTD-----LSGIKQIIQPLVESGALVRRTDEELLKALD-SFYVVEREGQIIACAALFPFF---K---EKCGEVA 517 (634)
Q Consensus 450 ~iR~a~~~D-----~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~-~~~V~~~~g~iiG~~~l~~~~---~---~~~~ei~ 517 (634)
++|.++..| .+.+.++....+ ....+.+++..... ..+++..+++++|++.+.+.. . .+.++|.
T Consensus 7 T~R~~~~~dld~~~~~~i~~l~~~aF----~~d~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~ 82 (181)
T d1m4ia_ 7 TARLVHTADLDSETRQDIRQMVTGAF----AGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVE 82 (181)
T ss_dssp CCEEEEGGGCCHHHHHHHHHHHHHHT----TTCCCHHHHHHTCSSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred eeeecchhhCCHHHHHHHHHHHHHhc----cCCCCHHHHhhhcCceEEEEEeCCceeEEEEEEEEEEecCCcccceEEEE
Confidence 445544444 455555544333 33345667766664 345667899999999886531 1 1357899
Q ss_pred EEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeeccc
Q 006709 518 AIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 596 (634)
Q Consensus 518 ~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~~ 596 (634)
.++|+|+|||||+|++|| +.+++.+++.+. ...+.+ ..+..||+++||+....
T Consensus 83 ~v~V~p~~Rg~Gig~~Ll-------------------------~~~~~~~r~~~~-~~~l~~~~~~~~fY~~~G~~~~~~ 136 (181)
T d1m4ia_ 83 GVAVRADWRGQRLVSALL-------------------------DAVEQVMRGAYQ-LGALSSSARARRLYASRGWLPWHG 136 (181)
T ss_dssp EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHHCS-EEEEECCTTTHHHHHHTTCEECCS
T ss_pred EEEEcHHHCCCHHHHHHH-------------------------HHHHHHHHhcCC-EEEEecchhhHHHHHHcCCEEcCC
Confidence 999999999999999999 888888877664 333444 67899999999997643
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.07 E-value=4.6e-10 Score=111.99 Aligned_cols=127 Identities=18% Similarity=0.120 Sum_probs=89.1
Q ss_pred cccccccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC-------------cEEEEEECCeEEEEEEEeeecC
Q 006709 445 SDLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------------SFYVVEREGQIIACAALFPFFK 510 (634)
Q Consensus 445 ~D~Ye~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~-------------~~~V~~~~g~iiG~~~l~~~~~ 510 (634)
.+.+...+.....|...+.++.......... .+++.+.+...+. .+++++.+|+++|++.+.....
T Consensus 147 ~~~~~~~~~~~~~d~~~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vvG~~~~~~~~~ 226 (308)
T d1p0ha_ 147 PDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPD 226 (308)
T ss_dssp CTTEEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTT
T ss_pred CCceeeecccchHHHHHHHHHHHhhhhhccccccchhHHHHHHHhccccCcccccceeeecccccCCeEEEEEEEEEcCC
Confidence 3455566778889999888886655433222 3445555544331 2344567999999998875433
Q ss_pred -CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHc----------CCcEEEEec
Q 006709 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASL----------GLDMLFLLT 579 (634)
Q Consensus 511 -~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~----------g~~~l~l~t 579 (634)
...++|..++|+|+|||+|||+.|+ ..+.+.++++ |+..+.|.+
T Consensus 227 ~~~~~~i~~~~V~p~~RGrGlG~~Ll-------------------------~~~~~~~~~~g~~~~~~~~~g~~~i~L~V 281 (308)
T d1p0ha_ 227 HPGLGEVYVLGVDPAAQRRGLGQMLT-------------------------SIGIVSLARRLGGRKTLDPAVEPAVLLYV 281 (308)
T ss_dssp STTEEEEEEEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHC---------CCCEEEEEE
T ss_pred CCcEEEEeccEECHHHcCCCHHHHHH-------------------------HHHHHHHHHhCCcceeeecCCccEEEEec
Confidence 3678999999999999999999999 7777777766 666666666
Q ss_pred ----HHhHHHHHhCCCeeccc
Q 006709 580 ----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 580 ----~~a~~~Y~k~GF~~~~~ 596 (634)
+.|.+||+++||++.+.
T Consensus 282 ~~~N~~A~~lY~~~GF~~~~~ 302 (308)
T d1p0ha_ 282 ESDNVAAVRTYQSLGFTTYSV 302 (308)
T ss_dssp ETTCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHHHHHCCCEEece
Confidence 46999999999999775
|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YdaF species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=1.1e-09 Score=101.63 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=90.4
Q ss_pred cccccCccchHHHHHHhHHHHHHc--cc----CccCCHHHHHhhc------------CcEEEEEECCeEEEEEEEeeec-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES--GA----LVRRTDEELLKAL------------DSFYVVEREGQIIACAALFPFF- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~--~~----~~~~~~~~~~~~l------------~~~~V~~~~g~iiG~~~l~~~~- 509 (634)
..+|+++++|++.+.+++..-.+. .+ ..+.+.+++.+.+ ...+++..+|++||++.+....
T Consensus 11 l~LR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~ 90 (180)
T d1nsla_ 11 ITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQ 90 (180)
T ss_dssp EEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHhcChHHHhhhcccCCCCccHHHHHHHHHHHHHHhhhccCcEEEEEEECCcEEEEEEeeeccc
Confidence 469999999999999997421110 01 1222334433222 1345667899999999988643
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~ 584 (634)
....++| .+.|+|+|||+|+|+.++ ..+.+++ ...+++.|.+.+ .++++
T Consensus 91 ~~~~~ei-g~~i~~~~~g~G~~~e~~-------------------------~~~~~~af~~~~~~~i~~~v~~~N~~s~~ 144 (180)
T d1nsla_ 91 VNRKAEI-GYWIAKEFEGKGIITAAC-------------------------RKLITYAFEELELNRVAICAAVGNEKSRA 144 (180)
T ss_dssp TTTEEEE-EEEECGGGTTSSHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHH
T ss_pred CCCeEEE-EEeecccccccccchhhh-------------------------hhhhhccccccCcceeecccccccHHHHH
Confidence 3456899 689999999999999999 8888877 677999999988 57999
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
+|+|+||+..++
T Consensus 145 ~~~k~GF~~eg~ 156 (180)
T d1nsla_ 145 VPERIGFLEEGK 156 (180)
T ss_dssp HHHHHTCEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999999999875
|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein Rv1347c/MT1389 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.01 E-value=3.1e-10 Score=107.85 Aligned_cols=128 Identities=13% Similarity=0.000 Sum_probs=95.9
Q ss_pred ccccCccchHHHHHHhHHHH-HHcccCccCCHHHHHhhc--------CcEEEEEECCeEEEEEEEeeec----------C
Q 006709 450 GTRTAKVTDLSGIKQIIQPL-VESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----------K 510 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~-~~~~~~~~~~~~~~~~~l--------~~~~V~~~~g~iiG~~~l~~~~----------~ 510 (634)
.+|+++++|++.|.++++.- +...+..+++.++..+.+ ..+++++.+++++|++.+.... .
T Consensus 35 ~LR~~~~~D~~~l~~w~~dp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 114 (198)
T d1yk3a1 35 GLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDAD 114 (198)
T ss_dssp EEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCCC
T ss_pred EEEeCCHHHHHHHHHHHcChhhhhccCCCCCHHHHHHHHHHHhcCCccceEEEEECCEEEEEEEEEeccccccccccccC
Confidence 69999999999999997532 222223344555544433 1467888999999999886321 1
Q ss_pred CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH--HHcCCcEEEEec----HHhHH
Q 006709 511 EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA--ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 ~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a--~~~g~~~l~l~t----~~a~~ 584 (634)
.....+..+.++|+|||||+|+.++ ..+.+++ ...|+.+|.+.+ +++++
T Consensus 115 ~~~~~~~~~~~~~~~~GkG~gt~~l-------------------------~~li~~~f~~~~~~~ri~~~v~~~N~~s~r 169 (198)
T d1yk3a1 115 PYDLGLHAAIADLSKVNRGFGPLLL-------------------------PRIVASVFANEPRCRRIMFDPDHRNTATRR 169 (198)
T ss_dssp TTCEEEEEEESCHHHHTTTHHHHHH-------------------------HHHHHHHHHHCTTCCEEEECCBTTCHHHHH
T ss_pred CCceEEEEEEEChhhcCCcHHHHHH-------------------------HHHHHHHHhhcCCccEEEEEeCCCCHHHHH
Confidence 2235676889999999999999999 7777765 356999999988 57999
Q ss_pred HHHhCCCeecccccchhH
Q 006709 585 WFKSRGFRECSIEMIPEE 602 (634)
Q Consensus 585 ~Y~k~GF~~~~~~~~~~~ 602 (634)
+|+++||+.++...+|..
T Consensus 170 l~erlGF~~~ge~d~~~~ 187 (198)
T d1yk3a1 170 LCEWAGCKFLGEHDTTNR 187 (198)
T ss_dssp HHHHHTCEEEEEEECSSC
T ss_pred HHHHcCCEEEeEEecCCC
Confidence 999999999997766643
|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL species: Salmonella typhimurium [TaxId: 90371]
Probab=98.94 E-value=6.8e-09 Score=95.97 Aligned_cols=123 Identities=11% Similarity=0.105 Sum_probs=87.9
Q ss_pred ccccccCccchHHHHHHhHHHH---HHcccC---ccCCHHHHHhhc-----------CcEEEEEECCeEEEEEEEeeecC
Q 006709 448 YEGTRTAKVTDLSGIKQIIQPL---VESGAL---VRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 510 (634)
Q Consensus 448 Ye~iR~a~~~D~~~i~~l~~~~---~~~~~~---~~~~~~~~~~~l-----------~~~~V~~~~g~iiG~~~l~~~~~ 510 (634)
...+|+++++|++.+.+++..- ...... ...+.++..+.+ ..++++..++++||++.+.....
T Consensus 8 ~l~LR~~~~~d~~~l~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~ 87 (174)
T d1s7ka1 8 TLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAIEP 87 (174)
T ss_dssp SEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEEET
T ss_pred CEEEEcCCHHHHHHHHHHHHcCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHcCCCceeEEEEcCCceEEEeeccccC
Confidence 3569999999999999986421 111100 001222222211 24677788999999999976533
Q ss_pred -CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHH
Q 006709 511 -EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 511 -~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~ 584 (634)
...++| .++|+|+|||+|+|++++ ..+.+.+ ..+++.++.+.+ .++++
T Consensus 88 ~~~~~ei-g~~i~~~~~gkG~~~ea~-------------------------~~l~~~~f~~~~~~~l~a~~~~~N~~S~~ 141 (174)
T d1s7ka1 88 INKAAYI-GYWLDESFQGQGIMSQSL-------------------------QALMTHYARRGDIRRFVIKCRVDNQASNA 141 (174)
T ss_dssp TTTEEEE-EEEECGGGCSSSHHHHHH-------------------------HHHHHHHHHHCSCCEEEEEEETTCHHHHH
T ss_pred CCCeEEE-EEEEeehhccchhHHHHH-------------------------HHHHhhhhhhcCcccceeecccCcHHHHH
Confidence 356888 778999999999999999 6777776 567999999888 57999
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
+|+|+||+..+.
T Consensus 142 ~~~k~Gf~~eG~ 153 (174)
T d1s7ka1 142 VARRNHFTLEGC 153 (174)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999999999876
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.94 E-value=1.4e-09 Score=93.82 Aligned_cols=76 Identities=22% Similarity=0.285 Sum_probs=67.4
Q ss_pred cCcEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHH
Q 006709 487 LDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKK 566 (634)
Q Consensus 487 l~~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 566 (634)
-..||+++++|+++|++.+.+. ++...+|..++|+|+|||||+|++|+ +.+.++
T Consensus 10 ~~~f~v~~~~g~~vg~~~~~~~-~~~~~~i~~~~V~p~~RG~Gig~~Lv-------------------------~~~l~~ 63 (102)
T d1r57a_ 10 ENKFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLL-------------------------KAVVEH 63 (102)
T ss_dssp TTEEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHH-------------------------HHHHHH
T ss_pred CCEEEEEEeCCceEEEEEEEEc-CCCEEEEEEEEEChHHCCccHHHHHH-------------------------HHHHHH
Confidence 3579999999999999998854 56789999999999999999999999 999999
Q ss_pred HHHcCCcEEEEecHHhHHHHHhC
Q 006709 567 AASLGLDMLFLLTTRTADWFKSR 589 (634)
Q Consensus 567 a~~~g~~~l~l~t~~a~~~Y~k~ 589 (634)
|++.|.+ +...++-+..||+|+
T Consensus 64 Ar~~g~k-vvp~c~y~~~~~~k~ 85 (102)
T d1r57a_ 64 ARENNLK-IIASCSFAKHMLEKE 85 (102)
T ss_dssp HHHHTCE-EEESSHHHHHHHHHC
T ss_pred HHHCCCE-EEEecHhHHHHHHhC
Confidence 9999985 566677889999985
|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA3270 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.91 E-value=6e-09 Score=97.51 Aligned_cols=123 Identities=13% Similarity=0.042 Sum_probs=92.9
Q ss_pred cccccCccchHHHHHHhHHHHHHc--ccCccCCHHHHHhhc------C-cEEEEEECCeEEEEEEEeee-cCCCeEEEEE
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL------D-SFYVVEREGQIIACAALFPF-FKEKCGEVAA 518 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~l------~-~~~V~~~~g~iiG~~~l~~~-~~~~~~ei~~ 518 (634)
..+|+++++|++.+.++.+...+. ....+.+.+.+...+ . ..+++..+|++||++.+... .....++|..
T Consensus 10 l~Lrpl~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~i~l~~~~~~~~~~eiG~ 89 (183)
T d1yrea1 10 LRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEIGW 89 (183)
T ss_dssp EEEEECCGGGHHHHHHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHhCCHHHhccCCCCCCHHHHHHHHHHHhCCCceEEEEEECCEEEEEEEeeeccccCCeEEEEE
Confidence 468999999999999986431111 111233444443333 1 34677889999999998754 3446789977
Q ss_pred EEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHHHhCCCee
Q 006709 519 IGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRE 593 (634)
Q Consensus 519 l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y~k~GF~~ 593 (634)
+.++|+|||+|+|+..+ ..+.+++ ..+|+.++.+.+ .+++++|+|+||+.
T Consensus 90 ~~l~~~~~g~G~~~ea~-------------------------~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~ 144 (183)
T d1yrea1 90 TWLDQAQHGSGLNRMIK-------------------------YLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQR 144 (183)
T ss_dssp EEECGGGTTTTHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEE
T ss_pred EEecHHHcCCccchhHH-------------------------HHHhhhhhhccCcceEEeecccCCHHHHhhHhccCeEE
Confidence 78999999999999999 7777877 567999999988 47899999999999
Q ss_pred ccc
Q 006709 594 CSI 596 (634)
Q Consensus 594 ~~~ 596 (634)
.+.
T Consensus 145 eg~ 147 (183)
T d1yrea1 145 EGV 147 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.88 E-value=1.2e-09 Score=111.37 Aligned_cols=111 Identities=15% Similarity=0.144 Sum_probs=85.9
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc---CcEEEEE-ECCeEEEEEEEeeecCCCeEEEEEEEECCCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPEC 525 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l---~~~~V~~-~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~ 525 (634)
.+|+++++|++.|.+++ ... ...+.+.+...+ ..+.++. .+|++||++... ..++|..++|+|+|
T Consensus 169 ~lr~l~~~da~~i~~~W----~~~--~~~s~~~i~~~i~~~~~~gl~~~e~G~lv~w~~~~-----~~g~l~~l~V~p~~ 237 (297)
T d1sqha_ 169 EIRRLRAEDAAMVHDSW----PNK--GEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQN-----DFSGLGMLQVLPKA 237 (297)
T ss_dssp EEECCCGGGHHHHHHTC----TTC--SSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEEC-----TTSSEEEEEECGGG
T ss_pred EeecCCHHHHHHHHHhc----CCC--CcchHHHHHHHHhhCCeEEEEECCCCCEEEEEEEC-----CCEEEEEEEEChHh
Confidence 69999999999998773 221 123444444433 3444543 469999998655 34679999999999
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec----HHhHHHHHhCCCeeccc
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 596 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t----~~a~~~Y~k~GF~~~~~ 596 (634)
||+|+|++|+ .++.+.+++.|+..+++.+ ..+.+||+|+||+.++.
T Consensus 238 r~~G~g~~l~-------------------------~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~ 287 (297)
T d1sqha_ 238 ERRGLGGLLA-------------------------AAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLV 287 (297)
T ss_dssp CSSSHHHHHH-------------------------HHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred cCCCHHHHHH-------------------------HHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeE
Confidence 9999999999 8999999999998888877 56899999999998663
|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative ribosomal-protein-serine acetyltransferase VC1889 species: Vibrio cholerae [TaxId: 666]
Probab=98.84 E-value=9.1e-09 Score=95.57 Aligned_cols=122 Identities=12% Similarity=0.080 Sum_probs=88.5
Q ss_pred cccccCccchHHHHHHhHHHHHH-ccc----CccCCHHHHHhhc----------C-cEEEEEE--CCeEEEEEEEeeec-
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVE-SGA----LVRRTDEELLKAL----------D-SFYVVER--EGQIIACAALFPFF- 509 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~-~~~----~~~~~~~~~~~~l----------~-~~~V~~~--~g~iiG~~~l~~~~- 509 (634)
..+|+++++|++.+.++++.-.. ..+ ....+.++..+.+ + .+|++.. ++++||++.+..+.
T Consensus 12 l~LR~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~ 91 (178)
T d2fcka1 12 LQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYH 91 (178)
T ss_dssp EEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEG
T ss_pred EEEEeCCHHHHHHHHHHHcCCHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEeeeccCCceEEEEeeccccc
Confidence 36999999999999998653110 111 1123444433322 1 2344433 58999999987543
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHH
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTAD 584 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~ 584 (634)
....++| .+.|+|+|||+|+|+.++ ..+.+++ ...++++|.+.+ .++++
T Consensus 92 ~~~~~ei-g~~i~~~~~g~G~~~e~l-------------------------~~l~~~af~~~~~~~i~~~~~~~N~~s~~ 145 (178)
T d2fcka1 92 TFNMASL-GYWIGDRYQRQGYGKEAL-------------------------TALILFCFERLELTRLEIVCDPENVPSQA 145 (178)
T ss_dssp GGTEEEE-EEEECHHHHTTTHHHHHH-------------------------HHHHHHHHHTSCCSEEEEEECTTCHHHHH
T ss_pred CCCeEEE-EEeeecccccchhhhhhh-------------------------heeeeeeccccCcceeeEecCCCcHHHHH
Confidence 3467899 689999999999999999 8888888 566999999988 57899
Q ss_pred HHHhCCCeeccc
Q 006709 585 WFKSRGFRECSI 596 (634)
Q Consensus 585 ~Y~k~GF~~~~~ 596 (634)
+|+|+||+.++.
T Consensus 146 l~ek~GF~~eg~ 157 (178)
T d2fcka1 146 LALRCGANREQL 157 (178)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHCCCEEEEE
Confidence 999999999875
|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltranferase Atu2435 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.78 E-value=4.3e-08 Score=88.10 Aligned_cols=123 Identities=11% Similarity=0.031 Sum_probs=88.6
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHHHHHhhc-----------CcEEEEEE--CCeEEEEEEEeeecCCCeEEE
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFFKEKCGEV 516 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l-----------~~~~V~~~--~g~iiG~~~l~~~~~~~~~ei 516 (634)
.+|+++++|++.+.++++.-....+..+.+.+...+.. ..++++.. ++.++|++.+.........++
T Consensus 11 ~LRp~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ig~~~~~~~~~~~~~~~ 90 (164)
T d2fsra1 11 TLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEKEL 90 (164)
T ss_dssp EEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSCEE
T ss_pred EEecCCHHHHHHHHHHHcChhhhhcCCCCCcHHHHHHHHHHHHHHhhcCcceEEEEEcCCCeEEEEEEeeccCccccceE
Confidence 69999999999999997643322333344443333322 23444443 588999998874443445565
Q ss_pred EEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHH-HHcCCcEEEEec----HHhHHHHHhCCC
Q 006709 517 AAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGF 591 (634)
Q Consensus 517 ~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a-~~~g~~~l~l~t----~~a~~~Y~k~GF 591 (634)
.+.+.|+|+++|+|..++ ..+.+++ ..+|+++|.+.+ ++++++|+|+||
T Consensus 91 -g~~~~~~~~~~g~~~~~~-------------------------~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF 144 (164)
T d2fsra1 91 -GWLLYEGHEGRGYAAEAA-------------------------VALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGG 144 (164)
T ss_dssp -EEEECTTCTTSSHHHHHH-------------------------HHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTC
T ss_pred -eeEeeeeeccccccccce-------------------------eEEEeeccccccceeEEEEECcCCHHHHHHHHHCCC
Confidence 789999999999999999 5555544 678999999988 579999999999
Q ss_pred eeccccc
Q 006709 592 RECSIEM 598 (634)
Q Consensus 592 ~~~~~~~ 598 (634)
+..+...
T Consensus 145 ~~eg~~~ 151 (164)
T d2fsra1 145 TLDPLAP 151 (164)
T ss_dssp EECTTSC
T ss_pred EEeeeEc
Confidence 9987643
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.52 E-value=5.9e-08 Score=96.25 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=82.4
Q ss_pred cCccchHHHHHHhHHHHHHcccCccCCHHHHHhhcC------cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCc
Q 006709 453 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 526 (634)
Q Consensus 453 ~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~------~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~r 526 (634)
.++++|++.+.+|+.......-..+...+.+....+ .+++++.+|++|||+.+.++. .....+..++|+|+||
T Consensus 7 ~l~~~d~~~v~~l~~~~~~~d~~~p~~e~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~-~~~~~~~~~~V~P~~R 85 (308)
T d1p0ha_ 7 ALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPR-GAGGAMAELVVHPQSR 85 (308)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSCSSCHHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEECGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCccHHHHHhhhccCCCceEEEEEecCCEEEEEEEEEecC-CCceeEEEEEECHHHh
Confidence 589999999999987654432222333433333222 244556789999999998653 3335566899999999
Q ss_pred CCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhHHHHHhCCCeeccc
Q 006709 527 GQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 596 (634)
Q Consensus 527 gqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~~~Y~k~GF~~~~~ 596 (634)
|+|||++|+ +.+++.+++.+...+......+..+|.+.||.....
T Consensus 86 ~~GiG~~Ll-------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 130 (308)
T d1p0ha_ 86 RRGIGTAMA-------------------------RAALAKTAGRNQFWAHGTLDPARATASALGLVGVRE 130 (308)
T ss_dssp SSSHHHHHH-------------------------HHHHHHTTTCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHH-------------------------HHHHHHHhhhccceecccchhhHHHHHhcccccccc
Confidence 999999999 888888766655544333356788999999987554
|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Autoinducer synthesis protein LasI species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.82 E-value=9.4e-05 Score=69.72 Aligned_cols=82 Identities=10% Similarity=0.203 Sum_probs=67.1
Q ss_pred cEEEEEECCeEEEEEEEeeec--------------------CCCeEEEEEEEECCCCcCCC----HHHHHHhhhcccccc
Q 006709 489 SFYVVEREGQIIACAALFPFF--------------------KEKCGEVAAIGVSPECRGQG----QGDKLLGLCIWPLLS 544 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~--------------------~~~~~ei~~l~V~p~~rgqG----iG~~Ll~~~i~~~~~ 544 (634)
+++++..+|+++||+.+.|.. .....|+..++|+|++|+++ ++..|+
T Consensus 55 ~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~--------- 125 (197)
T d1ro5a_ 55 YYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAM--------- 125 (197)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHH---------
T ss_pred EEEEeccccceEEEEEeecCCCCCcccccchhhhcCccccCCCceEEEEEEEEccccccccchhHHHHHHH---------
Confidence 577778899999999997532 12347999999999997666 566666
Q ss_pred cccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeecc
Q 006709 545 ETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 595 (634)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~~ 595 (634)
..+.+++.+.|++.++..+ ....+||+++||....
T Consensus 126 ----------------~~~~~~a~~~G~~~~~~~~~~~~~r~~~r~G~~~~~ 161 (197)
T d1ro5a_ 126 ----------------RALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVSR 161 (197)
T ss_dssp ----------------HHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEEEE
T ss_pred ----------------HHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCcEEE
Confidence 8999999999999999888 5688899999996643
|
| >d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: AstA-like domain: Arginine N-succinyltransferase, alpha chain, AstA species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.14 E-value=0.00039 Score=70.47 Aligned_cols=83 Identities=19% Similarity=0.339 Sum_probs=60.4
Q ss_pred ccccCccchHHHHHHhHHHHHHccc---CccCCHHHHHhhcC-----------------cEEEEEE--CCeEEEEEEEe-
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKALD-----------------SFYVVER--EGQIIACAALF- 506 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~---~~~~~~~~~~~~l~-----------------~~~V~~~--~g~iiG~~~l~- 506 (634)
-|||++.+|+++|.+|-+ ..+. ..+.+.+.+.+.+. .+||.|+ .|+|+|++.+.
T Consensus 3 viRpv~~~Dl~~L~~LA~---~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~~g~vvGts~I~a 79 (338)
T d1ylea1 3 VMRPAQAADLPQVQRLAA---DSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVA 79 (338)
T ss_dssp EEEECCGGGHHHHHHHHH---HSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEES
T ss_pred EEEeCchhhHHHHHHHHH---HcCCCcccCCCCHHHHHHHHHHHHHHHhccCCCCCCccEEEEEEeCCCCeEEEEEeEEE
Confidence 489999999999999943 2222 25566666666551 5677786 58999999873
Q ss_pred ------eec----------------------------CCCeEEEEEEEECCCCcCCCHHHHHH
Q 006709 507 ------PFF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLL 535 (634)
Q Consensus 507 ------~~~----------------------------~~~~~ei~~l~V~p~~rgqGiG~~Ll 535 (634)
||+ -..+.||..|+++|+||+.|.|+.|=
T Consensus 80 ~vG~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~L~~d~tg~sEl~tLfL~p~~R~~~~G~LLS 142 (338)
T d1ylea1 80 SAGFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNS 142 (338)
T ss_dssp STTSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHH
T ss_pred eecCCCCcEEEEeCceeecccccCCccccceEEEeccCCCCeeEEEEEECHHHcCCcchhHHH
Confidence 111 12347999999999999999887664
|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Acyl-homoserinelactone synthase EsaI species: Pantoea stewartii subsp. stewartii [TaxId: 66271]
Probab=96.86 E-value=0.0011 Score=62.99 Aligned_cols=81 Identities=10% Similarity=0.054 Sum_probs=66.5
Q ss_pred cEEEEEECCeEEEEEEEeeec------------------CCCeEEEEEEEECCCCcCC------CHHHHHHhhhcccccc
Q 006709 489 SFYVVEREGQIIACAALFPFF------------------KEKCGEVAAIGVSPECRGQ------GQGDKLLGLCIWPLLS 544 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~------------------~~~~~ei~~l~V~p~~rgq------GiG~~Ll~~~i~~~~~ 544 (634)
.++|...+|++|||+.+.|.. .....|+..++|+|++|+. .+...|+
T Consensus 53 ~~lv~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~--------- 123 (210)
T d1kzfa_ 53 RYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLF--------- 123 (210)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHH---------
T ss_pred EEEEEEcCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHH---------
Confidence 577888899999999996532 1234899999999999865 3677788
Q ss_pred cccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHHHHHhCCCeec
Q 006709 545 ETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 594 (634)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~~Y~k~GF~~~ 594 (634)
.++.+++.+.|++.++..+ ....++|++.||...
T Consensus 124 ----------------~~~~~~a~~~Gi~~~~~v~~~~~~r~~~r~G~~~~ 158 (210)
T d1kzfa_ 124 ----------------LAMVNWAQNNAYGNIYTIVSRAMLKILTRSGWQIK 158 (210)
T ss_dssp ----------------HHHHHHHHHTTCSEEEEEEEHHHHHHHHHHCCCCE
T ss_pred ----------------HHHHHHHHHCCCCEEEEEeCHHHHHHHHHCCCCeE
Confidence 8999999999999999888 567889999999554
|
| >d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein AT1g77540 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.62 E-value=0.0017 Score=54.24 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=43.6
Q ss_pred CCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecHHhH-HHHHh
Q 006709 510 KEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTTRTA-DWFKS 588 (634)
Q Consensus 510 ~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~~a~-~~Y~k 588 (634)
......|....|.|++||||+|++|+ +.+.+.+++.|. +|...|.-+. .|.++
T Consensus 29 ~~~~i~i~HT~V~~~~rGqGia~~Lv-------------------------~~al~~ar~~g~-kV~P~Cpyv~~~~~~k 82 (95)
T d1xmta_ 29 NGKVMDLVHTYVPSFKRGLGLASHLC-------------------------VAAFEHASSHSI-SIIPSCSYVSDTFLPR 82 (95)
T ss_dssp TTTEEEEEEEECCGGGTTSCHHHHHH-------------------------HHHHHHHHHTTC-EEEECSHHHHHTHHHH
T ss_pred CCcEEEEEEEEeCcccCCChHHHHHH-------------------------HHHHHHHHHCCC-EEEEeCHHHHHHHHHh
Confidence 34556788999999999999999999 999999999996 5666776554 47665
Q ss_pred C
Q 006709 589 R 589 (634)
Q Consensus 589 ~ 589 (634)
+
T Consensus 83 h 83 (95)
T d1xmta_ 83 N 83 (95)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=95.10 E-value=0.033 Score=50.32 Aligned_cols=63 Identities=14% Similarity=-0.061 Sum_probs=51.1
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++++..+|++||++.+.. ....++....+.+|++|..+.+..|+ -.+.++|+
T Consensus 72 ~l~~a~~~~~~ia~~l~~~--~~~~~~y~~~~~~~~~~~~~~~~ll~-------------------------~~~i~~a~ 124 (182)
T d1lrza3 72 LVPLAYINELPISAGFFFI--NPFEVVYYAGGTSNAFRHFAGSYAVQ-------------------------WEMINYAL 124 (182)
T ss_dssp ECEEEEEEEEEEEEEEEEE--CSSCEEEEEEEECGGGGGGCHHHHHH-------------------------HHHHHHHH
T ss_pred eeeeeecCCccEEEEEEEe--echhheeeeceeccchhhcCchHHHH-------------------------HHHHHHHH
Confidence 4677788999999877663 23445555678999999999999999 88899999
Q ss_pred HcCCcEEEEe
Q 006709 569 SLGLDMLFLL 578 (634)
Q Consensus 569 ~~g~~~l~l~ 578 (634)
+.|++..-+.
T Consensus 125 ~~G~~~~D~g 134 (182)
T d1lrza3 125 NHGIDRYNFY 134 (182)
T ss_dssp HTTCCEEEEE
T ss_pred HcCCcEEEec
Confidence 9999988774
|
| >d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=90.56 E-value=0.74 Score=41.27 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=64.1
Q ss_pred CccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEEEE---ECCeEEEEEEEeee----c-CC-
Q 006709 454 AKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYVVE---REGQIIACAALFPF----F-KE- 511 (634)
Q Consensus 454 a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V~~---~~g~iiG~~~l~~~----~-~~- 511 (634)
...+|-.++.+++.-+.++.+ -...+.+.+.-.+. .+.+.. ..+++|||+...|. . .+
T Consensus 29 ~d~~d~~~l~ely~lL~~nYVeDdd~~frf~YS~efL~WaL~~Pg~~~~w~vgvR~~~~~kLvgfIs~~P~~i~i~~~~~ 108 (165)
T d1iyka1 29 LDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNK 108 (165)
T ss_dssp CCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEETTTTE
T ss_pred ecCCCHHHHHHHHHHHHhhcccCccceEEEecCHHHhhhhhcCCCCCccceEEEEEccCCcEEEEEecceEEEEEecCCc
Confidence 344555566555544433322 13456666665553 222222 36899999998774 1 12
Q ss_pred --CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcE
Q 006709 512 --KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574 (634)
Q Consensus 512 --~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~ 574 (634)
+..+|.-|+||+.+|.+|++-.|+ +.+...+...|+-.
T Consensus 109 ~~~~~~INFLCVhKklR~KrlAPvLI-------------------------~EitRr~n~~gI~q 148 (165)
T d1iyka1 109 VIDSVEINFLCIHKKLRNKRLAPVLI-------------------------KEITRRVNKQNIWQ 148 (165)
T ss_dssp EEEEEEEEEEEECGGGTTSSCHHHHH-------------------------HHHHHHHHTTTCCC
T ss_pred EEEEEEEEEEEEchhHhhcCCcHHHH-------------------------HHHHHHhhccCeEE
Confidence 458999999999999999999999 88888887777643
|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=90.51 E-value=1.8 Score=37.66 Aligned_cols=62 Identities=15% Similarity=0.060 Sum_probs=42.7
Q ss_pred cEEEEEECCeEEEEEEEeeecCCCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHH
Q 006709 489 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAA 568 (634)
Q Consensus 489 ~~~V~~~~g~iiG~~~l~~~~~~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~ 568 (634)
.++++..+|++||.+.+... . ..++... ...++....+-+..|+ -++.++++
T Consensus 65 ~l~~~~~~g~~va~~l~~~~-~-~~~~y~~-~a~~~~~~~~~~~~L~-------------------------~~~i~~~~ 116 (171)
T d1ne9a2 65 RIFVAEREGKLLSTGIALKY-G-RKIWYMY-AGSMDGNTYYAPYAVQ-------------------------SEMIQWAL 116 (171)
T ss_dssp EEEEEEETTEEEEEEEEEEE-T-TEEEEEE-EEECSSCCTTHHHHHH-------------------------HHHHHHHH
T ss_pred EEEEEEeCCeEEEEEEEEEE-C-CEEEEEE-cccccccccccHHHHH-------------------------HHHHHHHH
Confidence 46677889999998776633 3 3333323 3344555566677666 78889999
Q ss_pred HcCCcEEEEe
Q 006709 569 SLGLDMLFLL 578 (634)
Q Consensus 569 ~~g~~~l~l~ 578 (634)
+.|++..-+.
T Consensus 117 ~~G~~~~D~g 126 (171)
T d1ne9a2 117 DTNTDLYDLG 126 (171)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCcEEEeC
Confidence 9999998775
|
| >d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.09 E-value=0.31 Score=42.79 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=63.6
Q ss_pred CccchHHHHHHhHHHHHHccc-------CccCCHHHHHhhcC------cEEEE---EECCeEEEEEEEeeec------CC
Q 006709 454 AKVTDLSGIKQIIQPLVESGA-------LVRRTDEELLKALD------SFYVV---EREGQIIACAALFPFF------KE 511 (634)
Q Consensus 454 a~~~D~~~i~~l~~~~~~~~~-------~~~~~~~~~~~~l~------~~~V~---~~~g~iiG~~~l~~~~------~~ 511 (634)
...+|-..+.+++.-+.++.+ -...+.+.+.-.+. .+.+. ...+++||++...|.. .-
T Consensus 7 ~d~~d~~~~~el~~lL~~nYVeddd~~frf~Ys~efl~Wal~~Pg~~~~w~igvr~~~~~kLVgfIs~~P~~i~i~~~~~ 86 (141)
T d1rxta1 7 LDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 86 (141)
T ss_dssp CCCSSHHHHHHHHHHHHTSSCCCCSSCCCBCCCHHHHHHHHCCTTCCGGGSEEEECSSSSCEEEEECCEECCCCCSSSCC
T ss_pred cCCCCHHHHHHHHHHHHHhcccCCCceEEEEeCHHHcEEEecCCCCCcCcEEEEEEccCCeEEEEEeceEEEEEEeCCEe
Confidence 344555555555544433322 13456666555552 22222 3579999999988752 12
Q ss_pred CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcE
Q 006709 512 KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDM 574 (634)
Q Consensus 512 ~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~ 574 (634)
+..+|.-|+||+++|.+|++-.|+ +++...+...|+-.
T Consensus 87 ~~~~InFLCVhKklR~k~lAPvLI-------------------------~EitRr~n~~gI~q 124 (141)
T d1rxta1 87 KMVEINFLCVHKKLRSKRVAPVLI-------------------------REITRRVHLEGIFQ 124 (141)
T ss_dssp CCEECCCCEECSSCCCSSSHHHHH-------------------------HHHHHHHTTTTCCC
T ss_pred EEEEEEEEEEchhHhhcCCcHHHH-------------------------HHHHHHhhccCeEE
Confidence 458999999999999999999999 88888886666543
|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HAT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.23 E-value=0.53 Score=46.62 Aligned_cols=58 Identities=10% Similarity=0.222 Sum_probs=43.7
Q ss_pred CeEEEEEEEeeecCC-------------CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHH
Q 006709 497 GQIIACAALFPFFKE-------------KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYI 563 (634)
Q Consensus 497 g~iiG~~~l~~~~~~-------------~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i 563 (634)
..++||+.++.++.- ....|+.+.|-|-|||+|+|+.|+ +.+
T Consensus 180 ~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RISQ~LILPPyQ~kG~G~~L~-------------------------~~i 234 (315)
T d1boba_ 180 KELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLY-------------------------EAI 234 (315)
T ss_dssp CCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHH-------------------------HHH
T ss_pred CcccceeeeeeeeeccccccccccccccccceeEEEEEeCccccCCchHHHH-------------------------HHH
Confidence 579999998765321 136799999999999999999999 777
Q ss_pred HHHHHH-cCCcEEEEec
Q 006709 564 EKKAAS-LGLDMLFLLT 579 (634)
Q Consensus 564 ~~~a~~-~g~~~l~l~t 579 (634)
-+.+.+ .++..|.++-
T Consensus 235 y~~~~~d~~v~eiTVED 251 (315)
T d1boba_ 235 IQSWLEDKSITEITVED 251 (315)
T ss_dssp HHHHHHCTTEEEEEESS
T ss_pred HHHHhcCCCeeeccccC
Confidence 666654 4556655544
|
| >d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.22 E-value=1.3 Score=40.44 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=45.3
Q ss_pred CCeEEEEEEEeeec----C--CCeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHH
Q 006709 496 EGQIIACAALFPFF----K--EKCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAAS 569 (634)
Q Consensus 496 ~g~iiG~~~l~~~~----~--~~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~ 569 (634)
.+++|||+...|.. + -+..+|.-|+||+++|.+|++-.|+ +.+...+..
T Consensus 109 ~~KLvg~Is~~P~~i~i~~~~~~~~~VnFLCVhkk~R~K~lAPvLI-------------------------~EitRr~n~ 163 (185)
T d1iica1 109 TQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLI-------------------------KEITRRVNK 163 (185)
T ss_dssp TCCEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGTTSSCHHHHH-------------------------HHHHHHHHT
T ss_pred CCcEEEEEeeeEEEEEEcCeEEEEEEEEEEEEchhHhhcCCcHHHH-------------------------HHHHHHhcc
Confidence 68999999987752 1 1358999999999999999999999 888888877
Q ss_pred cCC-cEEE
Q 006709 570 LGL-DMLF 576 (634)
Q Consensus 570 ~g~-~~l~ 576 (634)
.|+ ..|+
T Consensus 164 ~~i~qavy 171 (185)
T d1iica1 164 CDIWHALY 171 (185)
T ss_dssp TTCCCEEE
T ss_pred cCeEEEEE
Confidence 776 3344
|
| >d2d4pa1 d.108.1.1 (A:1-130) Hypothetical protein TTHA1254 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein TTHA1254 species: Thermus thermophilus [TaxId: 274]
Probab=86.42 E-value=4.3 Score=33.99 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=79.3
Q ss_pred ccccCccchHHHHHHhHHHHHHcccCccCCHH--HHHhhcCcEEEEEECCeEEEEEEEeeecCCCe--EEEEEEEECCCC
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDE--ELLKALDSFYVVEREGQIIACAALFPFFKEKC--GEVAAIGVSPEC 525 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~V~~~~g~iiG~~~l~~~~~~~~--~ei~~l~V~p~~ 525 (634)
.+|+.++.|++.+.++ .+- .+.+.. .+.+...+.|++++++.+.||+...+.+.... ..+..+ +-
T Consensus 2 r~r~f~e~d~d~L~~~------~g~-~~~sl~alrfyeRsgHsF~Aed~e~~~Gf~lAQavWqGdrptVl~~r~----~~ 70 (130)
T d2d4pa1 2 RFRPFTEEDLDRLNRL------AGK-RPVSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRI----EG 70 (130)
T ss_dssp EEECCCGGGHHHHHHT------STT-SCCCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEE----EE
T ss_pred cccccCchhHHHHHHH------hcc-CCCCHHHhhhhhhcCcceeeecCCceeeEeeehhhhcCCCceEEEEec----CC
Confidence 4789999999999766 121 112332 33444568899999999999998776554333 444444 55
Q ss_pred cCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEecH----HhHHHHHhCCCeec
Q 006709 526 RGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLTT----RTADWFKSRGFREC 594 (634)
Q Consensus 526 rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t~----~a~~~Y~k~GF~~~ 594 (634)
+..+.-.-|| ..+.+-|-..++-.+.+..+ .+.++-+..||..-
T Consensus 71 ~~ee~~~gLL-------------------------~AvvKSAYDaaVYev~~~ldpa~~a~~~a~ea~~~~~g 118 (130)
T d2d4pa1 71 RSVEALRGLL-------------------------RAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALG 118 (130)
T ss_dssp SSHHHHHHHH-------------------------HHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCC
T ss_pred CcHHHHHHHH-------------------------HHHHHHhhcceeeEEeeccCHHHHHHHHHHHhhccccC
Confidence 6778888899 88899999999999988873 57889999998763
|
| >d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.28 E-value=2.1 Score=40.40 Aligned_cols=122 Identities=18% Similarity=0.156 Sum_probs=79.2
Q ss_pred ccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC------------cEEEEEE-CCeEEEEEEEeeecC-----
Q 006709 450 GTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------------SFYVVER-EGQIIACAALFPFFK----- 510 (634)
Q Consensus 450 ~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~------------~~~V~~~-~g~iiG~~~l~~~~~----- 510 (634)
.+|++++.|++++.+|++.+...--+ ...+.|++..++. ..||++. +|+|..+++++..+.
T Consensus 42 glR~M~~kDv~~V~~LL~~yl~~f~l~~~Ft~eev~Hwflp~~~~~~~~~VI~sYVve~~~g~ITDF~SFY~Lpstvi~~ 121 (237)
T d1iica2 42 GLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNN 121 (237)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSC
T ss_pred ccccCchhhHHHHHHHHHHHHHhCcceEecCHHHhhheeccccCCCCCCcEEEEEEEECCCCcEeeEEEEEecchhhhCC
Confidence 58999999999999999988766443 3347888887762 2677776 789999988864321
Q ss_pred C-----CeEEEEEEEECCCCc----CCC-----HHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEE
Q 006709 511 E-----KCGEVAAIGVSPECR----GQG-----QGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLF 576 (634)
Q Consensus 511 ~-----~~~ei~~l~V~p~~r----gqG-----iG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~ 576 (634)
. +.+++.-.+-+-+++ ..- +...|. .+| .-+.-.|++.|++..-
T Consensus 122 ~kh~~l~aAY~fYy~~~~~~~~~~~~~~~~~~a~k~~l~-~Li---------------------~Dali~Ak~~~fDVFN 179 (237)
T d1iica2 122 TKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLC-ELI---------------------YDACILAKNANMDVFN 179 (237)
T ss_dssp SSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHH-HHH---------------------HHHHHHHHHTTCSEEE
T ss_pred CCcceEEEEEEEEEeeccccccccccchhhhhhhcchHH-HHH---------------------HHHHHHHHHcCCcEEE
Confidence 1 225554444444433 221 223333 222 4444468899999887
Q ss_pred Eec-HHhHHHHHhCCCee
Q 006709 577 LLT-TRTADWFKSRGFRE 593 (634)
Q Consensus 577 l~t-~~a~~~Y~k~GF~~ 593 (634)
..+ -.-..|.+++.|-+
T Consensus 180 aL~~mdN~~fLe~lKFg~ 197 (237)
T d1iica2 180 ALTSQDNTLFLDDLKFGP 197 (237)
T ss_dssp EESCTTGGGTTTTTTCEE
T ss_pred eccccccHHHHHHcCCcc
Confidence 777 23446888899876
|
| >d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=84.70 E-value=2.2 Score=40.01 Aligned_cols=122 Identities=19% Similarity=0.164 Sum_probs=80.3
Q ss_pred cccccCccchHHHHHHhHHHHHHcccC-ccCCHHHHHhhcC-----------cEEEEEE-CCeEEEEEEEeeec-----C
Q 006709 449 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-----------SFYVVER-EGQIIACAALFPFF-----K 510 (634)
Q Consensus 449 e~iR~a~~~D~~~i~~l~~~~~~~~~~-~~~~~~~~~~~l~-----------~~~V~~~-~g~iiG~~~l~~~~-----~ 510 (634)
..+|++++.|++++.+|++.+.+.--+ ...+.|++..++. ..||++. +|+|..+++++..+ .
T Consensus 41 ~glR~M~~kDv~~V~~LL~~yl~~f~l~~~F~~eev~Hwflp~~~~~~~~Vi~sYVve~~~g~ItDF~SFY~Lpstvi~~ 120 (227)
T d1iyka2 41 KGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDN 120 (227)
T ss_dssp TTEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSC
T ss_pred CCcccCchhhHHHHHHHHHHHHHcCcceEecCHHHHHHhhcCccccCCCCeEEEEEEECCCCcEeEEEEEeeccHHhhCC
Confidence 458999999999999999988765433 3347888888772 3677774 78999999886432 1
Q ss_pred C-----CeEEEEEEEECCCCcCCCHHHHHHhhhcccccccccccccccCCCcchHHHHHHHHHHcCCcEEEEec-HHhHH
Q 006709 511 E-----KCGEVAAIGVSPECRGQGQGDKLLGLCIWPLLSETRYDHISTNGFPFLRDYIEKKAASLGLDMLFLLT-TRTAD 584 (634)
Q Consensus 511 ~-----~~~ei~~l~V~p~~rgqGiG~~Ll~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~g~~~l~l~t-~~a~~ 584 (634)
+ +.+++ -.+|...+-...+-+.|. .+| ..+.-.|++.|++..-+.. -.-..
T Consensus 121 ~~h~~l~aAY~-fY~~~~~~~~~~~k~~l~-~Li---------------------~Dali~Ak~~~fDVFNaL~~mdN~~ 177 (227)
T d1iyka2 121 AQHDELGIAYL-FYYASDSFEKPNYKKRLN-ELI---------------------TDALITSKKFGVDVFNCLTCQDNTY 177 (227)
T ss_dssp SSCSEECEEEE-EEEEETTTTSTTHHHHHH-HHH---------------------HHHHHHHGGGTCSEEEEESCTTGGG
T ss_pred CccceEEEEEE-EEEEeecccchhhhhhHH-HHH---------------------HHHHHHHHHcCCcEEEcccccccHH
Confidence 2 22444 223444333333334444 222 4455568899999887776 23446
Q ss_pred HHHhCCCee
Q 006709 585 WFKSRGFRE 593 (634)
Q Consensus 585 ~Y~k~GF~~ 593 (634)
|.+++.|-+
T Consensus 178 fLe~lKFg~ 186 (227)
T d1iyka2 178 FLKDCKFGS 186 (227)
T ss_dssp TTTTTTCEE
T ss_pred HHHHcCCcc
Confidence 888999976
|