Citrus Sinensis ID: 006729

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630---
MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGRV
cccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHccccEEEEccccHHHHHHccccccccEEEEEEcccccHHHHHHHHHcccEEEEHHHHHHHHHHccccccccccccEEEEEEcccccccccEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHccccEEEccHHHcccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEcccccEEEEEccccccccccccEEccHHHHHHHHccccccEEEEEEcccccEEEEEEEccHHHHHHHHHccccccccHHHHHHHHHHHccccccEEEEEccccccccccccccccccEEEEEEEcccc
ccccEEEEEEEEccccccccccccccHHccccccccccccccccHHHHHHHHHHHHccccccEEEEEcccccccccEEEcHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccEEEEccccccHHHEEEEEcccccEEEEEEccHHHHHHHHcccccccEEEEEEEccccHHHHHHHHHcccEEEEHHHHHHHcccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHHHHccccccHccEEEEHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHccEEEEcccccccccEEEEcccccccccccccccccccEEEEEEcccccccccccccccEEEEEcccEcccccccHHHHHHHHHccccccccEEEEccccEEEEEEccccEEEEcccccccHHHHHHHHHcccccEEEEEEEccccccEEEEEcccccccHHHcccccccHHHHHHHHHHHHHccccccEEEEEHHccccccccHHHHHHHHHHHHHHHHcccc
MSNMKYVVEVEKakeasggrpsigpvyrslfakdgfpapipgmesCWDVFRMAVErnpnnrmlgqreivdgkagkYVWKTYKEVYDLVIKVVNAIRTcgveergkcgiygvncpeWIIGMEACnalglhcvplydtlgaGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSfskvkpeqREEIEKYGLAVYSWDeflqlgenkqfdlpvkkkndICTImytsgttgdpkgvmvsNENIVTFIAGVKCLLESVNekltsedvyvsylplahIFDRAIEEVFIsngaaigfWRGDVKLLLEDigelkptifcaVPRVLDRIYSGLnqkissggllkKTLFNIAYSYKfhnlkkghkhveaspiadkiVFDKVkqsfggrvrlilsgaapltphVETFLRVVACAHVLqgygltetcagtfvslpnemsmigtvgppvpnvdvclesvpemeydalsstprgevcvkgstvfsgyykredltkevmvdgwfhtgdigewqpdgslkiidRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRcmclspklacpfdVEVCCFLLSLLHILPTVLFlcilpvsplptdgvfiskkkklCCVIWFGRV
MSNMKYVVEVekakeasggrpsiGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERnpnnrmlgqreivdgkagkyVWKTYKEVYDLVIKVVNAIRtcgveergkcgiYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLktfpkttehlktivsfskvkpeqrEEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYtsgttgdpkgvMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNqkissggllKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEydalsstprgevcvkGSTVFSGYYKREDLTKEVMVDGWFHTgdigewqpdgsLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSplptdgvfiskkkklcCVIWFGRV
MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGRV
***********************GPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVK***REEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVS*********FCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPT********************
****KYV******************VYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQL***********K*NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGRV
MSNMKYVVEVE********RPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGRV
***MKYVVEVEKAKEASG***SIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGR*
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MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPKLACPFDVEVCCFLLSLLHILPTVLFLCILPVSPLPTDGVFISKKKKLCCVIWFGRV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query633 2.2.26 [Sep-21-2011]
Q9T0A0666 Long chain acyl-CoA synth yes no 0.857 0.815 0.749 0.0
Q9T009666 Long chain acyl-CoA synth no no 0.862 0.819 0.716 0.0
Q9C7W4665 Long chain acyl-CoA synth no no 0.864 0.822 0.698 0.0
Q9XIA9665 Long chain acyl-CoA synth no no 0.842 0.801 0.533 1e-176
O22898660 Long chain acyl-CoA synth no no 0.856 0.821 0.492 1e-161
Q8LKS5700 Long chain acyl-CoA synth no no 0.770 0.697 0.414 1e-104
Q8LPS1701 Long chain acyl-CoA synth no no 0.772 0.697 0.417 1e-101
Q55DR6667 Fatty acyl-CoA synthetase yes no 0.753 0.715 0.415 1e-100
Q1ZXQ4673 Fatty acyl-CoA synthetase no no 0.785 0.738 0.376 3e-95
O88813683 Long-chain-fatty-acid--Co yes no 0.763 0.707 0.394 2e-91
>sp|Q9T0A0|LACS4_ARATH Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1 Back     alignment and function desciption
 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/543 (74%), Positives = 475/543 (87%)

Query: 5   KYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLG 64
           KY+ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN MLG
Sbjct: 6   KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query: 65  QREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124
           +REIVDGK GKYVW+TY+EVYD+V+K+ N++R+ GV++  KCGIYG N PEWII MEACN
Sbjct: 66  RREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACN 125

Query: 125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184
           A GL+CVPLYDTLGA AVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF  V
Sbjct: 126 AHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGV 185

Query: 185 KPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSN 244
             EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM+SN
Sbjct: 186 SREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISN 245

Query: 245 ENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVK 304
           E+IVT IAGV  LL+S NE LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRGDVK
Sbjct: 246 ESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVK 305

Query: 305 LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKH 364
           LL+ED+ ELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF  +KKG  H
Sbjct: 306 LLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMKKGQSH 365

Query: 365 VEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCA 424
           VEASP+ DK+VF KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE+CA
Sbjct: 366 VEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCA 425

Query: 425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR 484
           GTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+ST RGE+C++G T+FSGYYKR
Sbjct: 426 GTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFSGYYKR 485

Query: 485 EDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAI 544
           EDLTKEV++DGW HTGD+GEWQPDGS+KIIDRKKNIFKLSQGEYVAVEN+ENIY  V A+
Sbjct: 486 EDLTKEVLIDGWLHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAV 545

Query: 545 DSV 547
           DSV
Sbjct: 546 DSV 548
Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate and linoleate.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 3
>sp|Q9T009|LACS5_ARATH Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana GN=LACS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7W4|LACS3_ARATH Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana GN=LACS3 PE=2 SV=1 Back     alignment and function description
>sp|Q9XIA9|LACS2_ARATH Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana GN=LACS2 PE=2 SV=1 Back     alignment and function description
>sp|O22898|LACS1_ARATH Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana GN=LACS1 PE=2 SV=1 Back     alignment and function description
>sp|Q8LKS5|LACS7_ARATH Long chain acyl-CoA synthetase 7, peroxisomal OS=Arabidopsis thaliana GN=LACS7 PE=1 SV=2 Back     alignment and function description
>sp|Q8LPS1|LACS6_ARATH Long chain acyl-CoA synthetase 6, peroxisomal OS=Arabidopsis thaliana GN=LACS6 PE=1 SV=1 Back     alignment and function description
>sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1 Back     alignment and function description
>sp|Q1ZXQ4|FCSB_DICDI Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1 Back     alignment and function description
>sp|O88813|ACSL5_RAT Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query633
225426350662 PREDICTED: long chain acyl-CoA synthetas 0.864 0.826 0.808 0.0
170676820665 long-chain acyl-CoA synthetase 4 [Ricinu 0.857 0.816 0.806 0.0
147810382654 hypothetical protein VITISV_035299 [Viti 0.849 0.822 0.819 0.0
224075096662 predicted protein [Populus trichocarpa] 0.864 0.826 0.800 0.0
74147576662 ACS-like protein [Gossypium hirsutum] 0.864 0.826 0.795 0.0
224053783662 predicted protein [Populus trichocarpa] 0.864 0.826 0.795 0.0
83320523656 ACS1 [Ricinus communis] 0.853 0.823 0.807 0.0
356497309662 PREDICTED: long chain acyl-CoA synthetas 0.864 0.826 0.780 0.0
118489772662 unknown [Populus trichocarpa x Populus d 0.864 0.826 0.786 0.0
449464058660 PREDICTED: long chain acyl-CoA synthetas 0.864 0.828 0.776 0.0
>gi|225426350|ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 [Vitis vinifera] gi|297742330|emb|CBI34479.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/547 (80%), Positives = 497/547 (90%)

Query: 1   MSNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNN 60
           M+  ++++E+EKAKEA  GRPSIGPVYRS FA+DGFP PI GMESCWDVFR+AVE+ P N
Sbjct: 1   MAQKRFIIEMEKAKEAKDGRPSIGPVYRSSFARDGFPKPIEGMESCWDVFRLAVEKYPGN 60

Query: 61  RMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGM 120
           RMLGQREIV+GKAGKYVW TYKEVYD V+KV N+IR+CGV E G+CGIYG N  EWI+ M
Sbjct: 61  RMLGQREIVNGKAGKYVWLTYKEVYDKVMKVGNSIRSCGVNEGGRCGIYGANSAEWIMSM 120

Query: 121 EACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVS 180
           EACNA GL+CVPLYDTLGAGAVEFIICHS +SI FVEEKKIPE+LKTFP TTE+LKTIVS
Sbjct: 121 EACNAHGLYCVPLYDTLGAGAVEFIICHSELSIVFVEEKKIPEVLKTFPNTTEYLKTIVS 180

Query: 181 FSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGV 240
           F KV PEQREE+EK+GLA+Y W+EFLQLG++K+FDLP+ KKNDICTIMYTSGTTGDPKGV
Sbjct: 181 FGKVTPEQREEVEKFGLAIYYWEEFLQLGDDKKFDLPLTKKNDICTIMYTSGTTGDPKGV 240

Query: 241 MVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWR 300
           M+SNE+IVT IAGVK LL+SVNE+L  +DV++SYLPLAHIFDR IEE+FIS+GA+IGFWR
Sbjct: 241 MISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLPLAHIFDRVIEELFISHGASIGFWR 300

Query: 301 GDVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKK 360
           GDVKLL+EDIGELKPTIFCAVPRVLDRIYSGL QKIS+GGLL+ TLFNIAY YK +NL K
Sbjct: 301 GDVKLLVEDIGELKPTIFCAVPRVLDRIYSGLKQKISAGGLLRNTLFNIAYKYKQYNLWK 360

Query: 361 GHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLT 420
           G K +EA+PI DKIVF KVKQ  GG VRLILSGAAPL+ HVE +LRVV CAHVLQGYGLT
Sbjct: 361 GVKTLEAAPICDKIVFGKVKQGLGGNVRLILSGAAPLSTHVEAYLRVVTCAHVLQGYGLT 420

Query: 421 ETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSG 480
           ETCAGTFVSLPNE+SM+GTVGPPVPNVDVCLESVPEM YDALSSTPRGE+C++G T+FSG
Sbjct: 421 ETCAGTFVSLPNEISMLGTVGPPVPNVDVCLESVPEMGYDALSSTPRGEICIRGKTLFSG 480

Query: 481 YYKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYAL 540
           YYKREDLTKEV+VDGWFHTGD+GEWQPDGS+KIIDRKKNIFKLSQGEYVAVENLENIY L
Sbjct: 481 YYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGL 540

Query: 541 VSAIDSV 547
           VS IDS+
Sbjct: 541 VSDIDSI 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|170676820|gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis] Back     alignment and taxonomy information
>gi|147810382|emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075096|ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|222841987|gb|EEE79534.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|74147576|gb|ABA00144.1| ACS-like protein [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224053783|ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|222845235|gb|EEE82782.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|83320523|gb|ABC02880.1| ACS1 [Ricinus communis] Back     alignment and taxonomy information
>gi|356497309|ref|XP_003517503.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|118489772|gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|449464058|ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus] gi|449505070|ref|XP_004162367.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query633
TAIR|locus:2138141666 LACS4 "long-chain acyl-CoA syn 0.857 0.815 0.749 6.6e-232
TAIR|locus:2136148666 AT4G11030 [Arabidopsis thalian 0.862 0.819 0.716 1.5e-227
TAIR|locus:2014265665 LACS3 "long-chain acyl-CoA syn 0.864 0.822 0.698 3e-220
TAIR|locus:2010177665 LACS2 "long-chain acyl-CoA syn 0.840 0.8 0.534 5.1e-161
TAIR|locus:2065195660 LACS1 "AT2G47240" [Arabidopsis 0.857 0.822 0.496 5.4e-150
TAIR|locus:2143661700 LACS7 "AT5G27600" [Arabidopsis 0.769 0.695 0.417 3.5e-98
TAIR|locus:2083013701 LACS6 "AT3G05970" [Arabidopsis 0.770 0.696 0.424 2e-97
DICTYBASE|DDB_G0269242667 fcsA "long-chain-fatty-acid-Co 0.753 0.715 0.416 4.7e-96
UNIPROTKB|E2R463698 ACSL5 "Uncharacterized protein 0.759 0.689 0.406 1.3e-94
UNIPROTKB|F1Q0U3683 ACSL5 "Uncharacterized protein 0.759 0.704 0.406 1.3e-94
TAIR|locus:2138141 LACS4 "long-chain acyl-CoA synthetase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2237 (792.5 bits), Expect = 6.6e-232, P = 6.6e-232
 Identities = 407/543 (74%), Positives = 475/543 (87%)

Query:     5 KYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLG 64
             KY+ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN MLG
Sbjct:     6 KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query:    65 QREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACN 124
             +REIVDGK GKYVW+TY+EVYD+V+K+ N++R+ GV++  KCGIYG N PEWII MEACN
Sbjct:    66 RREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACN 125

Query:   125 ALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKV 184
             A GL+CVPLYDTLGA AVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF  V
Sbjct:   126 AHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGV 185

Query:   185 KPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSN 244
               EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM+SN
Sbjct:   186 SREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISN 245

Query:   245 ENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVK 304
             E+IVT IAGV  LL+S NE LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRGDVK
Sbjct:   246 ESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVK 305

Query:   305 LLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKH 364
             LL+ED+ ELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF  +KKG  H
Sbjct:   306 LLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMKKGQSH 365

Query:   365 VEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTETCA 424
             VEASP+ DK+VF KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE+CA
Sbjct:   366 VEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCA 425

Query:   425 GTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR 484
             GTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+ST RGE+C++G T+FSGYYKR
Sbjct:   426 GTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFSGYYKR 485

Query:   485 EDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAI 544
             EDLTKEV++DGW HTGD+GEWQPDGS+KIIDRKKNIFKLSQGEYVAVEN+ENIY  V A+
Sbjct:   486 EDLTKEVLIDGWLHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAV 545

Query:   545 DSV 547
             DSV
Sbjct:   546 DSV 548
GO:0003824 "catalytic activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0001676 "long-chain fatty acid metabolic process" evidence=RCA;IDA
GO:0004467 "long-chain fatty acid-CoA ligase activity" evidence=IDA
GO:0006631 "fatty acid metabolic process" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0002213 "defense response to insect" evidence=RCA
GO:0006633 "fatty acid biosynthetic process" evidence=RCA;TAS
GO:0009611 "response to wounding" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
TAIR|locus:2136148 AT4G11030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014265 LACS3 "long-chain acyl-CoA synthetase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010177 LACS2 "long-chain acyl-CoA synthetase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065195 LACS1 "AT2G47240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143661 LACS7 "AT5G27600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083013 LACS6 "AT3G05970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269242 fcsA "long-chain-fatty-acid-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E2R463 ACSL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0U3 ACSL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9T0A0LACS4_ARATH6, ., 2, ., 1, ., 30.74950.85780.8153yesno
Q9T009LACS5_ARATH6, ., 2, ., 1, ., 30.71610.86250.8198nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.976
3rd Layer6.2.1.30.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 0.0
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 0.0
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 0.0
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 0.0
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 1e-162
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-129
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 1e-101
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 1e-100
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 2e-90
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 3e-88
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 3e-86
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 1e-70
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-65
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 4e-58
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 4e-57
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 2e-54
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 2e-45
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 2e-41
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 8e-39
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 6e-38
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 1e-37
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 2e-37
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 6e-37
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 9e-37
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 2e-36
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 5e-35
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 9e-33
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 9e-32
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 3e-31
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 1e-30
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 1e-29
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 1e-29
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 2e-29
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 2e-29
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 6e-29
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 7e-29
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 8e-29
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 3e-28
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 4e-26
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 6e-25
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 3e-24
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 3e-23
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4e-23
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 8e-23
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 2e-22
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 2e-22
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 3e-22
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 7e-22
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 1e-21
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 2e-21
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 1e-20
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 3e-20
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 3e-20
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 3e-20
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 7e-20
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 3e-19
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 8e-19
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 1e-18
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 2e-18
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 3e-18
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 3e-18
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-17
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 2e-17
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 6e-17
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 7e-17
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 8e-17
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 1e-16
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 2e-16
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 3e-16
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 7e-16
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 2e-15
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 3e-15
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 9e-15
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 3e-14
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 1e-13
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 2e-13
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 3e-13
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 3e-13
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 3e-13
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 4e-13
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 5e-13
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 7e-13
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 8e-13
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 1e-12
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-12
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 4e-12
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 4e-12
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 5e-12
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 8e-12
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 2e-11
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 2e-11
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 2e-11
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 5e-11
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 6e-11
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-10
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 1e-10
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 1e-10
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 2e-10
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 3e-10
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 3e-10
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-10
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 6e-10
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 1e-09
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 1e-09
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 2e-09
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 2e-09
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 2e-09
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 3e-09
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 3e-09
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 4e-09
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 8e-09
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 1e-08
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 1e-08
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 1e-08
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 2e-08
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 3e-08
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 3e-08
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-08
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 4e-08
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 5e-08
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-07
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 1e-07
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 1e-07
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 3e-07
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 4e-07
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 5e-07
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 5e-07
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 5e-07
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 1e-06
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-06
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 2e-06
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 3e-06
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 3e-06
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 4e-06
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 4e-06
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-06
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-06
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 6e-06
PTZ00297 1452 PTZ00297, PTZ00297, pantothenate kinase; Provision 6e-06
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 6e-06
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 8e-06
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 8e-06
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 1e-05
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 2e-05
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-05
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-05
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 4e-05
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-05
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 5e-05
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 7e-05
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 8e-05
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 8e-05
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 2e-04
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 2e-04
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 3e-04
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 4e-04
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 5e-04
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 5e-04
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.001
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 0.001
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 0.001
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 0.001
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 0.001
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 0.001
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 0.002
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 0.002
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 0.002
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 0.002
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 0.002
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 0.002
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 0.002
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 0.003
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 0.003
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 0.004
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 0.004
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 0.004
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 0.004
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information 
 Score =  944 bits (2441), Expect = 0.0
 Identities = 409/546 (74%), Positives = 479/546 (87%)

Query: 2   SNMKYVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNR 61
              K++ +VE+ KE S GRPS+GPVYRS+FAKDGFP PI GM+SCWDVFRM+VE+ PNN 
Sbjct: 3   QQKKFIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNP 62

Query: 62  MLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGME 121
           MLG+REIVDGK GKYVW+TY+EVYD+VIK+ N++R+ GV++  KCGIYG N PEWII ME
Sbjct: 63  MLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISME 122

Query: 122 ACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSF 181
           ACNA GL+CVPLYDTLGAGAVEFII HS VSI FVEEKKI E+ KT P +TE++KT+VSF
Sbjct: 123 ACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSF 182

Query: 182 SKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVM 241
             V  EQ+EE E +GL +Y+WDEFL+LGE KQ+DLP+KKK+DICTIMYTSGTTGDPKGVM
Sbjct: 183 GGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVM 242

Query: 242 VSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRG 301
           +SNE+IVT IAGV  LL+S N  LT +DVY+SYLPLAHIFDR IEE FI +GAAIGFWRG
Sbjct: 243 ISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRG 302

Query: 302 DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKG 361
           DVKLL+ED+GELKPTIFCAVPRVLDR+YSGL +K+S GG LKK +F+ A+SYKF N+KKG
Sbjct: 303 DVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKG 362

Query: 362 HKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVACAHVLQGYGLTE 421
             HVEASP+ DK+VF+KVKQ  GG VR+ILSGAAPL  HVE+FLRVVAC HVLQGYGLTE
Sbjct: 363 QSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTE 422

Query: 422 TCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGY 481
           +CAGTFVSLP+E+ M+GTVGPPVPNVD+ LESVPEMEYDAL+STPRGE+C++G T+FSGY
Sbjct: 423 SCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGY 482

Query: 482 YKREDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALV 541
           YKREDLTKEV++DGW HTGD+GEWQP+GS+KIIDRKKNIFKLSQGEYVAVEN+ENIY  V
Sbjct: 483 YKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEV 542

Query: 542 SAIDSV 547
            A+DSV
Sbjct: 543 QAVDSV 548

Length = 666
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 633
PLN02614666 long-chain acyl-CoA synthetase 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PLN02654666 acetate-CoA ligase 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.95
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.94
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.92
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.92
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.85
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.64
PRK09188365 serine/threonine protein kinase; Provisional 99.62
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.98
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 98.51
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.29
PLN02249597 indole-3-acetic acid-amido synthetase 97.79
PLN02620612 indole-3-acetic acid-amido synthetase 97.68
PLN02247606 indole-3-acetic acid-amido synthetase 97.63
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 96.04
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 92.71
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 86.04
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 81.64
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 80.08
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information 
Probab=100.00  E-value=8.1e-76  Score=661.80  Aligned_cols=560  Identities=72%  Similarity=1.229  Sum_probs=459.0

Q ss_pred             eeeecccccccCCCCCCCCCeeecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeeccCCCCceEEEeHHHHH
Q 006729            6 YVVEVEKAKEASGGRPSIGPVYRSLFAKDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVY   85 (633)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~p~~~Al~~~~~~d~~~~~~~~~Ty~eL~   85 (633)
                      |-..+.-.+..++..+.++++||+.....+++.+.+.+.|+.++|+++++++|+++|+......++..+.++++||+||.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~   86 (666)
T PLN02614          7 FIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVY   86 (666)
T ss_pred             eEEEecccccCCCCCCCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHH
Confidence            33444445566677789999999998888888777888899999999999999999998641102223456789999999


Q ss_pred             HHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhcCCeEeecCCCCChHHHHHHHhccCceEEEecCCChhhHh
Q 006729           86 DLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEML  165 (633)
Q Consensus        86 ~~~~~~A~~L~~~gi~~gd~Val~~~n~~~~~~~~lA~~~~G~i~v~i~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~  165 (633)
                      ++++++|++|.+.|+++||+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++++....+.
T Consensus        87 ~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~  166 (666)
T PLN02614         87 DIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELF  166 (666)
T ss_pred             HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877655554


Q ss_pred             hcCCCcccCccEEEEecCCChhhHHHHhhcCceEeeHHHHHhcccCCCCCCCCCCCCCeEEEEeccCCCCCcceeeechH
Q 006729          166 KTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNE  245 (633)
Q Consensus       166 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~th~  245 (633)
                      .........++.++.++.............+....++++++..............++|+++|+|||||||.||||++||+
T Consensus       167 ~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~  246 (666)
T PLN02614        167 KTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNE  246 (666)
T ss_pred             HhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecH
Confidence            44333223466777765422111111112244567888877654322222233467999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhccCCCCCcEEEEeCchHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHHhhhcCCeEEEechHHH
Q 006729          246 NIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIFDRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVL  325 (633)
Q Consensus       246 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~k~t~l~~~P~~l  325 (633)
                      ++...+......+......+..+|++++++|++|.+++.....++..|+++++.++++..+++.+++++||+++++|+++
T Consensus       247 nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~  326 (666)
T PLN02614        247 SIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVL  326 (666)
T ss_pred             HHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHH
Confidence            99988776554331111146789999999999999998776677889999999877999999999999999999999999


Q ss_pred             HHHHHHHHHHHhccChhHHHHHHHHHHhHHhhhhcCCCCcCcchhhHHHhHHHHHHhcCCcEEEEEecCCCCcHHHHHHH
Q 006729          326 DRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFL  405 (633)
Q Consensus       326 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~lr~i~~~G~~l~~~l~~~~  405 (633)
                      +.+.+.........+.+++.++.++.+.++..+++|.......+..+.+.++.+++..++++|.+++||+++++++.+ +
T Consensus       327 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~-~  405 (666)
T PLN02614        327 DRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVES-F  405 (666)
T ss_pred             HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHH-H
Confidence            999988777777777788888888888877777777666667788888889888888888999999999999987654 4


Q ss_pred             HHhc-CCeEEEeeccccCCCcccccCCCCCcccCCCCCccCCceEEEeecCCCccccCCCCCCCeEEEecCcccccccCC
Q 006729          406 RVVA-CAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKR  484 (633)
Q Consensus       406 ~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~~~~~i~i~~~~~~~~~~~~~g~~Gei~v~g~~~~~gY~~~  484 (633)
                      .+.+ ++.++++||+||++++++...+......+++|+|+|+++++|++.+++...++++|+.|||+|+||+++.|||++
T Consensus       406 ~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~  485 (666)
T PLN02614        406 LRVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKR  485 (666)
T ss_pred             HHHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCC
Confidence            4455 589999999999986655444433334589999999999999985555556778899999999999999999999


Q ss_pred             hhhhhccccCCeeecCceEEECCCCcEEEeeeccceeEeCCCeeecchHHHHHHhhCcccceEEEEccC-ccceEEEEEE
Q 006729          485 EDLTKEVMVDGWFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFC-LLYVCAQLVI  563 (633)
Q Consensus       485 ~~~~~~~~~~g~~~TGD~~~~~~dG~l~i~GR~~d~i~~~~G~~v~p~~iE~~l~~~p~V~~~~v~~~~-~~~~~~~~~~  563 (633)
                      |+.|.+.|.||||+|||+|++|+||+|+|+||.+|+|++++|++|+|.+||++|.+||.|.+|+|+|.+ ++++.++++.
T Consensus       486 pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~~l~alvv~  565 (666)
T PLN02614        486 EDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFLVAIANP  565 (666)
T ss_pred             HHHhhhhhccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcceEEEEEeC
Confidence            999999999999999999999999999999999999997789999999999999999999999999999 4688888775


Q ss_pred             hHH
Q 006729          564 YKL  566 (633)
Q Consensus       564 ~~~  566 (633)
                      ..+
T Consensus       566 ~~~  568 (666)
T PLN02614        566 NQQ  568 (666)
T ss_pred             CHH
Confidence            433

>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 2e-20
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-19
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-19
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 7e-19
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 1e-17
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 1e-17
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 1e-17
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 3e-17
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 1e-16
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 2e-15
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 5e-15
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 1e-14
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 5e-14
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 6e-14
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 2e-13
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 3e-13
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 4e-13
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 4e-13
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 1e-12
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 1e-10
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 7e-09
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 2e-08
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 2e-07
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 5e-07
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 8e-07
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 1e-06
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 1e-06
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 1e-06
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 3e-06
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 4e-06
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 4e-05
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 4e-05
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 4e-05
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 7e-05
3e7w_A511 Crystal Structure Of Dlta: Implications For The Rea 2e-04
4dg8_A620 Structure Of Pa1221, An Nrps Protein Containing Ade 5e-04
3kxw_A590 The Crystal Structure Of Fatty Acid Amp Ligase From 6e-04
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 7e-04
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure 
Iteration: 1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 136/317 (42%), Gaps = 50/317 (15%)
Query: 222 NDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAHIF 281
            D   ++YTSGTTG PKG ++    + T +     L ++   + T EDV V  LPL H+ 
Sbjct: 155 GDPALVVYTSGTTGPPKGAVIPRRALATTL---DALADAW--QWTGEDVLVQGLPLFHV- 208
Query: 282 DRAIEEVFISNGAAIGFWRGDVKLLLEDIGELKPTIFCAVPRVLDRIYS-GLNQKISSGG 340
                     +G  +G               L P       R L R  + G  ++++ G 
Sbjct: 209 ----------HGLVLGI--------------LGPLRRGGSVRHLGRFSTEGAARELNDGA 244
Query: 341 LLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPH 400
            +   LF +   Y        H+  E  P AD     ++ ++  G  RL++SG+A L  H
Sbjct: 245 TM---LFGVPTMY--------HRIAETLP-ADP----ELAKALAG-ARLLVSGSAALPVH 287
Query: 401 VETFLRVVACAHVLQGYGLTETCAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYD 460
               +       V++ YG+TET   T V    E    GTVG P+P V++ L         
Sbjct: 288 DHERIAAATGRRVIERYGMTETLMNTSVRADGE-PRAGTVGVPLPGVELRLVEEDGTPIA 346
Query: 461 ALSSTPRGEVCVKGSTVFSGYYKREDLTKEVMV-DGWFHTGDIGEWQPDGSLKIIDRKKN 519
           AL     GE+ V+G  +F+ Y  R D T      DG+F TGD+    PDG ++I+ RK  
Sbjct: 347 ALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKAT 406
Query: 520 IFKLSQGEYVAVENLEN 536
               S G  +    +EN
Sbjct: 407 DLIKSGGYKIGAGEIEN 423
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps) Adenylation Domains Length = 511 Back     alignment and structure
>pdb|4DG8|A Chain A, Structure Of Pa1221, An Nrps Protein Containing Adenylation And Pcp Domains Length = 620 Back     alignment and structure
>pdb|3KXW|A Chain A, The Crystal Structure Of Fatty Acid Amp Ligase From Legionella Pneumophila Length = 590 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query633
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 1e-66
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 6e-66
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 5e-65
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 1e-64
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 9e-64
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 1e-63
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 3e-63
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 5e-61
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 2e-60
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 3e-60
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 2e-59
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 2e-57
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 4e-43
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-42
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 2e-40
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 2e-40
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 5e-34
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-28
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 8e-18
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 3e-17
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 4e-17
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-16
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 1e-15
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-15
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 5e-15
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 7e-13
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 3e-14
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 4e-11
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 5e-14
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 4e-13
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 5e-10
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
 Score =  226 bits (579), Expect = 1e-66
 Identities = 99/516 (19%), Positives = 180/516 (34%), Gaps = 105/516 (20%)

Query: 26  VYRSLFAKDGFPA-PIPGMESCWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEV 84
            Y+      GFP+   P + S  D    A E+      +   E             + E+
Sbjct: 6   KYKI-----GFPSLYYPKI-SLADRIDAAAEKFGEKTAIISAEPKFPSEFPESM-NFLEI 58

Query: 85  YDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEF 144
            ++  K+ + I   GV +    G+   N  ++++ + A   +    VP+     +  +E 
Sbjct: 59  CEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPINPMYKSFELEH 118

Query: 145 IICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDE 204
           I+  S  +   V             KT   ++ +                 G  V S  E
Sbjct: 119 ILNDSEATTLVVHSMLYENFKPVLEKT--GVERVFVV--------------GGEVNSLSE 162

Query: 205 FLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEK 264
            +  G     ++ V  + D+  I YT GTTG PKGVM+++ N+      +          
Sbjct: 163 VMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATG----- 217

Query: 265 LTSEDVYVSYLPLAHIFDRAIEEVFISNGAAI----GFWRGDVKLLLEDIGELKPTIFCA 320
           L+  D  V  +P+ H  +  +  + ++ G        F   + ++L E+I + K T   A
Sbjct: 218 LSHMDTIVGCMPMFHSAEFGLVNLMVTVGNEYVVMGMF---NQEMLAENIEKYKGTFSWA 274

Query: 321 VPRVLDRIYSGLNQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVK 380
           VP       + L                         +                 +    
Sbjct: 275 VPP----ALNVL-------------------------VNTLE------SSNKTYDWS--- 296

Query: 381 QSFGGRVRLILSGAAPLTPHV-ETFLRVVAC------AHVLQGYGLTETCAGTFVSLPNE 433
                 +++  +GA P+ P + E  L++ A           Q +G+TE C     + P  
Sbjct: 297 -----YLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLR 351

Query: 434 MSMIGTVGPPVPNVDVCL------ESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDL 487
           +    T G P+ ++++ +        +   E         GE+ ++G  +F GY+KRE  
Sbjct: 352 LDKSTTQGVPMSDIELKVISLEDGRELGVGE--------SGEIVIRGPNIFKGYWKREKE 403

Query: 488 TKEVMV-----DGWFHTGDIGEWQPDGSLKIIDRKK 518
            +E          +F TGD+G    +G L   DR K
Sbjct: 404 NQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVK 439
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query633
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
4dg8_A 620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.95
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.09
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.05
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.9
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.86
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.64
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.11
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.06
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 91.69
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 86.68
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 84.19
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 83.97
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 81.24
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
Probab=100.00  E-value=4.4e-73  Score=628.29  Aligned_cols=511  Identities=22%  Similarity=0.267  Sum_probs=397.1

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeeccC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEe
Q 006729           33 KDGFPAPIPGMESCWDVFRMAVERNPNNRMLGQREIVDG--KAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYG  110 (633)
Q Consensus        33 ~~~~~~~~~~~~~i~~~l~~~a~~~p~~~Al~~~~~~d~--~~~~~~~~Ty~eL~~~~~~~A~~L~~~gi~~gd~Val~~  110 (633)
                      ..++|..+....++.++|+++++++|+++|+++.   ++  ..+..+++||+||.++++++|+.|.+.|+++||+|+|++
T Consensus         8 ~~~~p~~~~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~   84 (549)
T 3g7s_A            8 KIGFPSLYYPKISLADRIDAAAEKFGEKTAIISA---EPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCI   84 (549)
T ss_dssp             CCCCCCCCCCCCCTTHHHHHHHHHHTTSEEEEEE---SSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred             ccCCCCCCcCCCCHHHHHHHHHHhCCCceEEEeC---CCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence            3445555566789999999999999999999987   42  123345899999999999999999999999999999999


Q ss_pred             CCchhHHHHHHHHHhcCCeEeecCCCCChHHHHHHHhccCceEEEecCCChhhHhhcCCCcccCccEEEEecCCChhhHH
Q 006729          111 VNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIPEMLKTFPKTTEHLKTIVSFSKVKPEQRE  190 (633)
Q Consensus       111 ~n~~~~~~~~lA~~~~G~i~v~i~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~  190 (633)
                      +|++++++++|||+++|++++|+++.++.+++.+++++++++++|++......+.......  .+..++..+..      
T Consensus        85 ~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~------  156 (549)
T 3g7s_A           85 PNSIDYVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT--GVERVFVVGGE------  156 (549)
T ss_dssp             CSSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS--CCCEEEEETCS------
T ss_pred             CCCHHHHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC--CCcEEEEeCCC------
Confidence            9999999999999999999999999999999999999999999999988776665544332  24555555432      


Q ss_pred             HHhhcCceEeeHHHHHhcccCCCCCCCCCCCCCeEEEEeccCCCCCcceeeechHHHHHHHHHHHHhhhhhccCCCCCcE
Q 006729          191 EIEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDV  270 (633)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~th~~l~~~~~~~~~~~~~~~~~~~~~d~  270 (633)
                              ..++.++...............++++++|+|||||||.||+|.+||+++.+.+..+...+     ++..+|+
T Consensus       157 --------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~  223 (549)
T 3g7s_A          157 --------VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVAT-----GLSHMDT  223 (549)
T ss_dssp             --------SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHH-----CCCTTCE
T ss_pred             --------CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHc-----CCCCCCE
Confidence                    234555555443322222222348999999999999999999999999999999988877     8999999


Q ss_pred             EEEeCchHHHHHHHHHHHHHHcCcEEEEEcC-CHHHHHHHhhhcCCeEEEechHHHHHHHHHHHHHHhccChhHHHHHHH
Q 006729          271 YVSYLPLAHIFDRAIEEVFISNGAAIGFWRG-DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKKTLFNI  349 (633)
Q Consensus       271 ~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~k~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~~~~~~  349 (633)
                      +++.+|++|.+++...+.++..|+++++.+. ++..+++.++++++|+++++|+++..+++........           
T Consensus       224 ~~~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-----------  292 (549)
T 3g7s_A          224 IVGCMPMFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKT-----------  292 (549)
T ss_dssp             EECCSCTTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCC-----------
T ss_pred             EEEeCcHHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhccc-----------
Confidence            9999999999999887788999999999866 9999999999999999999999999987754332100           


Q ss_pred             HHHhHHhhhhcCCCCcCcchhhHHHhHHHHHHhcCCcEEEEEecCCCCcHHHHHHHHHh----cC---CeEEEeeccccC
Q 006729          350 AYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVV----AC---AHVLQGYGLTET  422 (633)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~lr~i~~~G~~l~~~l~~~~~~~----~~---~~l~~~yG~tE~  422 (633)
                                                      .+++++|.+++||+++++++.+.+.+.    ++   +.+++.||+||+
T Consensus       293 --------------------------------~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~  340 (549)
T 3g7s_A          293 --------------------------------YDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEA  340 (549)
T ss_dssp             --------------------------------CCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGG
T ss_pred             --------------------------------CCccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEecccc
Confidence                                            122689999999999999999999887    56   899999999999


Q ss_pred             CCcccccCCCCCcccCCCCCccCCceEEEeecCCCccccCCCCCCCeEEEecCcccccccCChhhhhccc---cCC--ee
Q 006729          423 CAGTFVSLPNEMSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKGSTVFSGYYKREDLTKEVM---VDG--WF  497 (633)
Q Consensus       423 ~~~~~~~~~~~~~~~~s~G~p~~~~~i~i~~~~~~~~~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~---~~g--~~  497 (633)
                      +.+++...........++|+|+++++++|+| +++ ..++++|+.|||+|+|+.++.|||++|+.+.+.|   .+|  ||
T Consensus       341 ~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~~-g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~  418 (549)
T 3g7s_A          341 CPMVTTNPPLRLDKSTTQGVPMSDIELKVIS-LED-GRELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFF  418 (549)
T ss_dssp             SSEEEECCGGGGGGTTSCCEECTTCEEEEEC-SSS-CCEECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEE
T ss_pred             chhhhcCCccccCcCCCccccCCCCEEEEEe-CCC-CcCCCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceE
Confidence            9888776655545568999999999999998 333 3567788999999999999999999999999998   677  99


Q ss_pred             ecCceEEECCCCcEEEeeeccceeEeCCCeeecchHHHHHHhhCcccceEEEEccCccceEEEEEEhHHHHhhccCCCCc
Q 006729          498 HTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLSPK  577 (633)
Q Consensus       498 ~TGD~~~~~~dG~l~i~GR~~d~i~~~~G~~v~p~~iE~~l~~~p~V~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (633)
                      +|||+|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.+++..+..++++.+       ..++
T Consensus       419 ~TGDl~~~~~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv-------~~~~  490 (549)
T 3g7s_A          419 RTGDVGFIDEEGFLHFQDRVKEVIKY-KGYTIAPFELEALLMKHEAVMDVAVIGKPDEEAGEVPKAFIV-------LKPE  490 (549)
T ss_dssp             EEEEEEEECTTSCEEEEEEC-------------CHHHHHHHTTSTTEEEEEEECCCC------CEEEEE-------ECST
T ss_pred             ccCcEEEEcCCceEEEeccccceEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeEccccCceEEEEEE-------ECCC
Confidence            99999999999999999999999997 899999999999999999999999999999877766555433       2333


Q ss_pred             c-cCCCchhHHHHHHHHH--Hhhhh-hhhheeccCCCCCCCceeeecCceee
Q 006729          578 L-ACPFDVEVCCFLLSLL--HILPT-VLFLCILPVSPLPTDGVFISKKKKLC  625 (633)
Q Consensus       578 ~-~~~~~~~l~~~l~~~l--~~~p~-~~~~~~iP~~~~p~~~~~~~~~~~~~  625 (633)
                      . ...+.++|+++|+++|  |++|. ++++++     +|+|+++|.+|+.|.
T Consensus       491 ~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~-----lP~t~~GKi~R~~L~  537 (549)
T 3g7s_A          491 YRGKVDEEDIIEWVRERISGYKRVREVEFVEE-----LPRTASGKLLRRLLR  537 (549)
T ss_dssp             TTTSCCHHHHHHHHHTTCC-----CCCCEEEE-----CC-------------
T ss_pred             ccCcCCHHHHHHHHHHhccCcccceEEEEecc-----CCCCCCcCEeHHHHH
Confidence            2 3455678999999988  99999 667765     555666778888775
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 633
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 6e-61
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 9e-55
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 8e-50
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 8e-49
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 2e-32
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 7e-18
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 4e-17
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-15
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 2e-13
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  212 bits (540), Expect = 6e-61
 Identities = 75/530 (14%), Positives = 158/530 (29%), Gaps = 88/530 (16%)

Query: 46  CWDVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGK 105
             +     ++ N +   +        ++      +Y+E++  V +  N +   G+++   
Sbjct: 74  AANCLDRHLQENGDRTAIIWEGDDTSQSKHI---SYRELHRDVCRFANTLLDLGIKKGDV 130

Query: 106 CGIYGVNCPEWIIGMEACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEK------ 159
             IY    PE  + M AC  +G     ++      AV   I  S   +    ++      
Sbjct: 131 VAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGR 190

Query: 160 KIPEMLKTFPKTTEHLKTIVSFSKVKPEQREEIEKYGLAVYSWDEFLQLGENKQFDLPVK 219
            IP              T V    V      +I+        W + ++    +     + 
Sbjct: 191 SIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAM- 249

Query: 220 KKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAGVKCLLESVNEKLTSEDVYVSYLPLAH 279
              D   I+YTSG+TG PKGV+ +    + + A     +          D+Y     +  
Sbjct: 250 NAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFD----YHPGDIYWCTADVGW 305

Query: 280 IFDRAIEEVF--ISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGL 332
           +       ++  ++ GA    + G         + + + + +  I    P  +  +    
Sbjct: 306 VTG-HSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRAL---- 360

Query: 333 NQKISSGGLLKKTLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILS 392
                                    + +G K +E +  +               +R++ S
Sbjct: 361 -------------------------MAEGDKAIEGTDRS--------------SLRILGS 381

Query: 393 GAAPLTPHV-ETFLRVV--ACAHVLQGYGLTETCAGTFVSLPNEMSM-IGTVGPPVPNVD 448
              P+ P   E + + +      V+  +  TET       LP  + +  G+   P   V 
Sbjct: 382 VGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQ 441

Query: 449 VCL-----ESVPEMEYDALSSTPRGEVCVKGS--TVFSGYYKREDLTKE---VMVDGWFH 498
             L                     G + +  S        +   +  ++         + 
Sbjct: 442 PALVDNEGHPQEGAT--------EGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYF 493

Query: 499 TGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVC 548
           +GD      DG   I  R  ++  +S G  +    +E+       I    
Sbjct: 494 SGDGARRDEDGYYWITGRVDDVLNVS-GHRLGTAEIESALVAHPKIAEAA 542
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query633
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 80.55
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=4.4e-70  Score=610.96  Aligned_cols=511  Identities=14%  Similarity=0.195  Sum_probs=407.3

Q ss_pred             CCCHH-HHHHHHHHhCCCCCceeeeeeccCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHH
Q 006729           43 MESCW-DVFRMAVERNPNNRMLGQREIVDGKAGKYVWKTYKEVYDLVIKVVNAIRTCGVEERGKCGIYGVNCPEWIIGME  121 (633)
Q Consensus        43 ~~~i~-~~l~~~a~~~p~~~Al~~~~~~d~~~~~~~~~Ty~eL~~~~~~~A~~L~~~gi~~gd~Val~~~n~~~~~~~~l  121 (633)
                      ..|+. .+|+++++.+||++|+++.   ...++..+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|
T Consensus        70 ~~N~~~n~ldrh~~~~~d~~Ali~~---~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~l  146 (643)
T d1pg4a_          70 TLNLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAML  146 (643)
T ss_dssp             EECHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhCCCCEEEEEE---ecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHH
Confidence            34554 4777888999999999987   4556677899999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCeEeecCCCCChHHHHHHHhccCceEEEecCCChh---------hHhhc-CCCcccCccEEEEecCCChhhHHH
Q 006729          122 ACNALGLHCVPLYDTLGAGAVEFIICHSGVSIAFVEEKKIP---------EMLKT-FPKTTEHLKTIVSFSKVKPEQREE  191 (633)
Q Consensus       122 A~~~~G~i~v~i~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~-~~~~~~~~~~vi~~~~~~~~~~~~  191 (633)
                      ||+++|++++|+++.++.+++.+++++++++++|+++....         ..... .......+..++.+........  
T Consensus       147 A~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~--  224 (643)
T d1pg4a_         147 ACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID--  224 (643)
T ss_dssp             HHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC--
T ss_pred             HHHHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccc--
Confidence            99999999999999999999999999999999999865321         11111 1122356677777654422110  


Q ss_pred             HhhcCceEeeHHHHHhcccCCCCCCCCCCCCCeEEEEeccCCCCCcceeeechHHHHHHHHH-HHHhhhhhccCCCCCcE
Q 006729          192 IEKYGLAVYSWDEFLQLGENKQFDLPVKKKNDICTIMYTSGTTGDPKGVMVSNENIVTFIAG-VKCLLESVNEKLTSEDV  270 (633)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~th~~l~~~~~~-~~~~~~~~~~~~~~~d~  270 (633)
                        ........+.+.... ..........+++++++|+|||||||.||||++||++++..... +...+     ++.++|+
T Consensus       225 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~-----~~~~~d~  296 (643)
T d1pg4a_         225 --WQEGRDLWWRDLIEK-ASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVF-----DYHPGDI  296 (643)
T ss_dssp             --CCBTTEEEHHHHHTT-SCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHT-----TCCTTCE
T ss_pred             --cccccchhhhhhhcc-cCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhh-----CCCCCCE
Confidence              001112233333332 22334445667899999999999999999999999997655444 44455     7899999


Q ss_pred             EEEeCchHHHHHHHH-HHHHHHcCcEEEEEcC-----CHHHHHHHhhhcCCeEEEechHHHHHHHHHHHHHHhccChhHH
Q 006729          271 YVSYLPLAHIFDRAI-EEVFISNGAAIGFWRG-----DVKLLLEDIGELKPTIFCAVPRVLDRIYSGLNQKISSGGLLKK  344 (633)
Q Consensus       271 ~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~k~t~l~~~P~~l~~l~~~~~~~~~~~~~~~~  344 (633)
                      +++.+|++|.+|+.. ++.+|+.|+++++.+.     ++..+++.|+++++|+++++|+++..|++.....         
T Consensus       297 ~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~---------  367 (643)
T d1pg4a_         297 YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKA---------  367 (643)
T ss_dssp             EEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGG---------
T ss_pred             EEEeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchh---------
Confidence            999999999999876 5677999999999753     7899999999999999999999999886532111         


Q ss_pred             HHHHHHHHhHHhhhhcCCCCcCcchhhHHHhHHHHHHhcCCcEEEEEecCCCCcHHHHHHHHHhcC---CeEEEeecccc
Q 006729          345 TLFNIAYSYKFHNLKKGHKHVEASPIADKIVFDKVKQSFGGRVRLILSGAAPLTPHVETFLRVVAC---AHVLQGYGLTE  421 (633)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~lr~i~~~G~~l~~~l~~~~~~~~~---~~l~~~yG~tE  421 (633)
                                                        ....++++||.+++||+++++++.+++.+.++   +++++.||+||
T Consensus       368 ----------------------------------~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE  413 (643)
T d1pg4a_         368 ----------------------------------IEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTE  413 (643)
T ss_dssp             ----------------------------------TTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGG
T ss_pred             ----------------------------------ccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhh
Confidence                                              11233479999999999999999999999884   77999999999


Q ss_pred             CCCcccccCCCC-CcccCCCCCccCCceEEEeecCCCccccCCCCCCCeEEEec--CcccccccCChhhhhccc---cCC
Q 006729          422 TCAGTFVSLPNE-MSMIGTVGPPVPNVDVCLESVPEMEYDALSSTPRGEVCVKG--STVFSGYYKREDLTKEVM---VDG  495 (633)
Q Consensus       422 ~~~~~~~~~~~~-~~~~~s~G~p~~~~~i~i~~~~~~~~~~~~~g~~Gei~v~g--~~~~~gY~~~~~~~~~~~---~~g  495 (633)
                      +++.++...+.. ....+++|+|++|++++|+| +++  .++++|+.|||+|+|  |+++.|||++++.+.+.+   .+|
T Consensus       414 ~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd-~~g--~~~~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g  490 (643)
T d1pg4a_         414 TGGFMITPLPGAIELKAGSATRPFFGVQPALVD-NEG--HPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKN  490 (643)
T ss_dssp             GSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTC--CBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTT
T ss_pred             ccceEEecCCCccCCCCCccccccCCCEEEEEC-CCC--CCCCCCceEEEEEecCCCcccccccCChhhchhhhcccCCC
Confidence            998777655433 33468999999999999998 554  456678999999999  468999999998877665   588


Q ss_pred             eeecCceEEECCCCcEEEeeeccceeEeCCCeeecchHHHHHHhhCcccceEEEEccCccceEEEEEEhHHHHhhccCCC
Q 006729          496 WFHTGDIGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLENIYALVSAIDSVCSSTFCLLYVCAQLVIYKLMVSRCMCLS  575 (633)
Q Consensus       496 ~~~TGD~~~~~~dG~l~i~GR~~d~i~~~~G~~v~p~~iE~~l~~~p~V~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  575 (633)
                      ||+|||+|++|+||+++++||++|+|++ +|++|+|.|||++|.+||.|.||+|++++++..++.++++++       +.
T Consensus       491 ~~~TGDl~~~d~dG~l~i~GR~dd~ik~-~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv-------~~  562 (643)
T d1pg4a_         491 MYFSGDGARRDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVT-------LN  562 (643)
T ss_dssp             SEEEEEEEEECTTSCEEEEEESSSEEEE-TTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTEEEEEEEEE-------EC
T ss_pred             eEEcCCEEEECCCceEEEecccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEEEEEEE-------EC
Confidence            9999999999999999999999999997 799999999999999999999999999999988887777554       23


Q ss_pred             CcccCCC--chhHHHHHHHHH--Hhhhh-hhhheeccCCCCCCCceeeecCceee
Q 006729          576 PKLACPF--DVEVCCFLLSLL--HILPT-VLFLCILPVSPLPTDGVFISKKKKLC  625 (633)
Q Consensus       576 ~~~~~~~--~~~l~~~l~~~l--~~~p~-~~~~~~iP~~~~p~~~~~~~~~~~~~  625 (633)
                      ++.....  ..+|+++|++++  |++|. ++++++||+     |.++|..|+.|.
T Consensus       563 ~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~-----T~sGKi~R~~Lr  612 (643)
T d1pg4a_         563 HGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPK-----TRSGKIMRRILR  612 (643)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCB-----CTTSCBCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCC-----CCCcCccHHHHH
Confidence            3332221  147999999988  99999 666665555     555567776653
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure