Citrus Sinensis ID: 006760

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630--
MKAQHERADNCGLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEQKLRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLTMGTFGGQGISGPSLDLDLLPGSSSTLPNLPYQQIVLSDMDKSLMTDIAANAMEELLRLLQTNEPLWMKSSTDGRDILDLDSYERMFPRANSHLKNPNVRTESSRDSGVVIMNGLALVDMFMDCSKWVELFPTIVSMAKTIEVISSGMMGGHSGSLLLMYEELQVLSPVVPTREFYVLRYCQQIEQGSWAVVNVSYDSPQFSSQCQSHRFPSGCLIQDLPNGYSKVTWVEHLEIEDRTPIHRLYQDLIQSGMAFGADRWLATLQRMCERFACLMVSGTSTRDLGGVIPSPDGKRSMMKLAQRMVSSFCTSISTSNRHRGTTISGLNEVGVRVTLHKSMDPGQPNGVVLNAATTFWLPIPPQNVFNFFKDERTRPQWDVLTNGNAVQEVAHIANGSNPGNCISVLRAINTSQNNMLILQESCIDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGHLDQGDGASTSSNVHGNMGSRSSGSLISVAFQILVSSLPSAKLNMESVTTVNNLIGTTVQQIKAALNCPSS
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccEEEEECcCEEEEEcHHHHHHHHcccHHHHHcccccccccEEEEEECcccccccccEEEEEHHHHHHcccccccEEEEEEEEEEEEcccEEEEEEEEccccccccccccccccccEEEEEcccccEEEEEEEEEEEcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccCCcccccccEEEEEEEcccccccccEEEEEEEccccccccHHHHHHccccccccccHHccccccccHHHHccccccccccEEEEEccccccccEEEEEECcccccccEEEEccccHHHHHHHHcccccccccccccccEEcccccccccccccccccccccccccccccEEEEEEEHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccc
*******ADNCGLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEQKLRMENAQLKEELDRVSSIAAKYIGRPISQL*PV******SLDLTM*TFGGQGISG**LDLDL********PNLPYQQIVLSDMDKSLMTDIAANAMEELLRLLQTNEPLWMKSSTDGRDILDLDSYERMFPR**********RTESSRDSGVVIMNGLALVDMFMDCSKWVELFPTIVSMAKTIEVISSGMMGGHSGSLLLMYEELQVLSPVVPTREFYVLRYCQQIEQGSWAVVNVSYDSPQFSSQCQSHRFPSGCLIQDLPNGYSKVTWVEHLEIEDRTPIHRLYQDLIQSGMAFGADRWLATLQRMCERFACLMVSGTSTRDLGGVIPSPDGKRSMMKLAQRMVSSFCTSISTSNRHRGTTISGLNEVGVRVTLHK*****QPNGVVLNAATTFWLPIPPQNVFNFFKDERTRPQWDVLTNGNAVQEVAHIANGSNPGNCISVLRAINTSQNNMLILQESCIDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPD**************************LISVAFQILVSSLPSAKLNMESVTTVNNLIGTTVQQIKAALNC***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKAQHERADNCGLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDxxxxxxxxxxxxxxxxxxxxxAAKYIGRPISQLPPVQPIHISSLDLTMGTFGGQGISGPSLDLDLLPGSSSTLPNLPYQQIVLSDMDKSLMTDIAANAMEELLRLLQTNEPLWMKSSTDGRDILDLDSYERMFPRANSHLKNPNVRTESSRDSGVVIMNGLALVDMFMDCSKWVELFPTIVSMAKTIEVISSGMMGGHSGSLLLMYEELQVLSPVVPTREFYVLRYCQQIEQGSWAVVNVSYDSPQFSSQCQSHRFPSGCLIQDLPNGYSKVTWVEHLEIEDRTPIHRLYQDLIQSGMAFGADRWLATLQRMCERFACLMVSGTSTRDLGGVIPSPDGKRSMMKLAQRMVSSFCTSISTSNRHRGTTISGLNEVGVRVTLHKSMDPGQPNGVVLNAATTFWLPIPPQNVFNFFKDERTRPQWDVLTNGNAVQEVAHIANGSNPGNCISVLRAINTSQNNMLILQESCIDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGHLDQGDGASTSSNVHGNMGSRSSGSLISVAFQILVSSLPSAKLNMESVTTVNNLIGTTVQQIKAALNCPSS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Homeobox-leucine zipper protein ROC8 Probable transcription factor.probableQ69T58
Homeobox-leucine zipper protein HDG11 Probable transcription factor.probableQ9FX31

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R55, chain A
Confidence level:confident
Coverage over the Query: 138-367
View the alignment between query and template
View the model in PyMOL
Template: 2R55, chain A
Confidence level:confident
Coverage over the Query: 389-561,583-628
View the alignment between query and template
View the model in PyMOL
Template: 2JEE, chain A
Confidence level:probable
Coverage over the Query: 11-34,49-76
View the alignment between query and template
View the model in PyMOL